TCONS_00066002 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066002
Unique NameTCONS_00066002
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2647

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066002 ID=TCONS_00066002|Name=TCONS_00066002|organism=Clytia hemisphaerica|type=transcript|length=2647bp
NNAAATAACAAAAATGACATCATTAGCTACACAACTGAAACAGTTGCAAA
TCCCTGGATTACAACAAACAGTTGGCAAAGTCAGCCATGTTTCAATCCTT
TTTGACAAAGAAGTTGCTGCCACCCTTGATATGGAGTCTATCTACAACAT
TGGTACAAGTGGATTTCAGCAGATTGTATCGGTCGATCCTATTTTCCAGG
ATTACGAAGACATCCTTTTCTCACAAAAGTCTTTGCATTTGCAGAGAACA
ATGGAAAGTAAAGATATTAATAACAGAATTCATAAGGCTGTTGATGAGTT
CCTAGTTTTCTTGTCTCCTTACTTACAACTTCAAGCTGCCAAGAAATGTC
TAGAATGGCTCATTTGGAGATTTCAGATTCACAATTTTGAGCGTGATTCA
TTGATTAGATGTATTCTACCATACCATGAAACGCAAATCTTCTCCAGGAT
CATCCAGCTTGTCCATATGACAAACTATGGTACCATTTGGGAGCATTTGC
TACCAAAATTAAAACAAGGTGGTACGATCAACACAACAACTTTGTTAAAA
CATTGTAGATCCAATTTGAATTTGTTGTCATTCATTTTTGATATGGCACA
ACAAGCAAGTCATCTTTTGAAGAAAGAACCTAAATCTGGGTTGCAAGTTG
TGTTTTCGTTCTACTCAAGAACCATTTGTGGGGTCATCAGTGAAGAGAAG
CTTAACATTGAAGTCATTGAAAGGGTCATGTCCATGGTTGAAGTGGGAAT
GAATTCAAATAGTTCAGATTTCATTTGCTCAACCTACATGGTCATCACTA
TGTTTGTTTCAAATAACCGGCAACTGAAGTCCAAAGCAAAAGCAAGTCTT
ATGATCAGAAttttaaagtCAATGGGAATTGCAAATTATGAATATGGCTT
GATGTGCCTGCTGAGTATAACTCATCTCTCCAGCTTTACCTCTTTACCAG
AANTATGGCTTGATGTGCCTACTGAGTATAACTCATCTCTCCAGCTTTAC
CTCTTTACCAGAAAGtcTTTACAAAGAATTTCTGAATTTGAATCCCAACC
GGTTGGTAAACTGTCTATCAGAAATGCAACAGAAGTATGAGATTGATTCA
TTCCTTCAGTTGGTCTTACAACTTTACTGCAAGCATTTCAATGTTCAAGA
ACCAGAGATTGCTTCCAGTGCCATCGATATGCTTTTCATACATTTAGAGC
TTTCTGCAGAAATGCTTCATAAACCTTGCCAATACTTGGTTGATGCTTTT
GTCAAATTAAACGATGACAATGAAAGTGCTGCTGAAGAATTAAGTAGACT
GATCAAAATCATCTCCAAAAGATTTCCAACAGCTTTTGATGGTTGCATTG
ATACAAAGTTCAAGGAGCATGAAGAGAACCCATCAGCCATTGAACAACTA
AAAATTTTAACCAGAATTTGCTTGAGTGAAGAGAAATCAAAAGTGATAGG
AAACGCTGAACTACCCCTTGTTGTTTGCTTAAACCATCCTGAGAAACAGT
TACGATTGATGGCTACAAAACAGCTGTTTGAGATTTTCAAATCTGGTGTT
TATTCTGAAGATCCTTCATTCTTTCAAGAGGGCGTCATCAGCAGATTGCA
GGATGATGAGCCAGCTGTGGTAAAAGAGTGTCTGAGCCATCCAAAATCAC
TTTTGAAGATTCTCTCTAAAGATGATGTCCATATTGTCTTGGAAAAGTTA
TCTGAGCGAGCTGATGATACCTACAACTTGAGTCCCTTGTATATGAGGGT
GTTACAAGATGTAGATCAAAATAGTACTGCTGATCAAAAGTTATTCTTCA
TGGTTTTATCTCAAGTTTTCACATCAATCACAAGTAAAAAATTAAAtgca
gtttttgaatttttcaacaacaaaGAGTATAACATCGACAATCACATCTT
GAAAGCAATCAAAACCACACTTTCATCCCATGGTGGTGTCAAAGTCAAAG
ATGAAGCCAAGCTACTACAGCTTAATCGAACCTTGATGATGAACGTTGCA
GAAAGTTATGATTTGGATTCATTCAAAATTCTTTGGCAGTTCCAGTCCTC
TCTACATTCTGATCACATTCTGAAATTTATCTCAAATCTGATCTTATTGA
TCAACACTTTATCTGGCAAATTTGGAGTAAATGAAGCTGCTTGTTTTGGA
CTGTCGAGAGATGTTGTTGCTTCTCTTGATGTCGATAACTTTTTAGAGAA
TGACCCAGTTCCATTCATGTTGGAAATGTTTGTAGATGGTATCAAACGAA
ATCGAAAGTTTGATGTTTCATTGACCAGTCTTTGTAATGCATTCTTTGTG
AAGGTCTTGATCCAGAAAATTTCAGAAAACAAAGATGAATTTGATGAAGT
TAAACAGAACATCTTCAAGACCATTGTCCCTTTTGCTACCAATAAAAAGT
CAAATGCTTTAAGCAACACTTGTCGTGAACTAACGAAAACGTTTTTCCAG
ACATGTTTCCAAGATACAGAACAAGTCCGTCTGTTCACCGGCCAACTATG
TATCAACGAACTATTTGCGAACCAAAACATCAGCAAGGTGGATTTGGAAA
TTTCGTTGAGCTGTTTATCAATTGTTGGTCTGTTGGTTGAAAGTGCTGAG
AATGCAGCAATCACTGATCTGGAAATTGGACTACAAATCGGCTTATN
Run BLAST on NCBI

transcript from alignment at scaffold_448:696447..704290-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066002 ID=TCONS_00066002|Name=TCONS_00066002|organism=Clytia hemisphaerica|type=transcript|length=7844bp|location=Sequence derived from alignment at scaffold_448:696447..704290- (Clytia hemisphaerica)
NNAAATAACAAAAATGACATCATTAGCTACACAACTGAAACAGTTGCAAA
TCCCTGGATTACAACAAACAGTTGGCAAAGTCAGCCATGTTTCAATCCTT
TTTGACAAAGAAGTTGCTGCCACCCTTGATATGGAGTCTATCTACAACAT
TGGTACAAGTGGATTTCAGCAGATTGTATCGGTCGATCCTATTTTCCAGG
ATTACGAAGACATCCTTTTCTCACAAAAGTCTTTGCATTTGCAGAGAACA
ATGGAAAGTAAAGATATTAATAACAGAATTCATAAGGCTGTTGATGAGTT
CCTAGTTTTCTTGTCTCCTTACTTACAACTTCAAGCTGCCAAGAAATGTC
TAGAATGGCTCATTTGGAGATTTCAGATTCACAATTTTGAGCGTGATTCA
TTGATTAGATGTATTCTACCATACCATGAAACGCAAATCTTCTCCAGGAT
CATCCAGCTTGTCCATATGACAAACTATGGTACCATTTGGGAGCATTTGC
TACCAAAATTAAAACAAGGTGGTACGATCAACACAACAACTTTGTTAAAA
CATTGTAGATCCAATTTGAATTTGTTGTCATTCATTTTTGATATGGCACA
ACAAGCAAGTCATCTTTTGAAGAAAGAACCTAAATCTGGGTTGCAAGTTG
TGTTTTCGTTCTACTCAAGAACCATTTGTGGGGTCATCAGTGAAGAGAAG
CTTAACATTGAAGTCATTGAAAGGGTCATGTCCATGGTTGAAGTGGGAAT
GAATTCAAATAGTTCAGATTTCATTTGCTCAACCTACATGGTCATCACTA
TGTTTGTTTCAAATAACCGGCAACTGAAGTCCAAAGCAAAAGCAAGTCTT
ATGATCAGAATTTTAAAGGTTTGTTTTTTGATTTGTTGTCAATGATTGAA
ACTAATTATTTCCTTTTGATTAAGTTATGTTATTGTTATTGATATTGATA
TTAACTGATTTTTTGTTCTTTGCGAGGCTGCAAGGGAAAGCTTGGTTGAA
ATCAAATCTTTCAGCCAATTCGATTGACTTCAAAATTTGCCAATTTTGCC
CTTGAAATTGACATTGAAATTGTGGATTTGGCAAAGTTGGCGAGTATGGT
AAATTTTTAAGTCAATCGAATTGGCTGTTGGTATTGCATTCAATTTCATT
TTATGATGGAACTAGTTCTGCTCCATAAAAAAATTGTTCATTATCGATGA
CAATACATAAAACAACATATAATACCGGGTGACCCACGAAAAAGGTGACC
CACGAAAAAGTTCGGACAGTTTGTCTCAAATGTCTCAAAGTTTAAAAGAG
GTATCAAATTGTTTTATTATCAATCAATCAAACAAGGTCCTTAAATCGTT
AGAAAAGAGCATGTTAGATATTTTTATTCAATTTTAAAACTTTTTTTAGA
TTCTTTACTTTCACAAAATTTATTAACAAGTTNACTATCTTGATTTAATA
AAACATTCTTTCACCATCAAAATACTACAGTGTTTAATGCATGGAAGGCT
TTACTTACTAATAAGAAATAATCTTGACAAGGTAAATCTGCTTTCCTCCA
AAGTGTAGATTATGTTTTATGTAATGTACCTTCAGGGCAGGGGGGGGTCA
TGCAGTTATTATATAAACACTATGACAATTACTACCGTGGTGGTATATAA
ACCAAAATTTGGGAAAACAGTTACTCCACCAGTGGACTAACTNTTTCTAG
CATATTCCAGGCAAACCCACACTCTCTGTTCTTTCATAAGACACGACATT
TTCATAAAGAAGGCAAATTATGCCTATTTATAAAATATTTTTGATAAAAA
TATTTACAATAAATTTATATAAATCTACTTCGTTGTTAATTTATTATTTT
ACAAACTTTAATTACCTACAACACTAATTAACGAGGTCATAAAACATCAG
CACACTCGAAAAACACAATGTTAAAGATAAAAAAAACATTTATAATTTGA
TACCACATTTTTGACGTGTTTTTGCACTTTCCGATGATTGAATTTTGACT
TTAAAAGCTCATAAATGAAGAACCAACTGAACCAAATTTAAAAAGTAATA
GCTCAAAGTTTAAGTTAGAGCATCCTCTATCTTTCAAAAAAAAGATTGAG
TTTATATTACCTTTATTTCAGACCCTAGCCAACGAAAACCGTCCGAACTT
TTTCGTGGGTCACCCGGTATATTTTCTTGTTTTTAAAGGGCTTGTGAAAT
AGCATGCTATCATAGATATTATTCTTTTTTTCAGTCAATGGGAATTGCAA
ATTATGAATATGGCTTGATGTGCCTGCTGAGTATAACTCATCTCTCCAGC
TTTACCTCTTTACCAGAANTATGGCTTGATGTGCCTACTGAGTATAACTC
ATCTCTCCAGCTTTACCTCTTTACCAGAAAGGTATTAAAAACTGGCTGAA
ATCATAAAACTTATCTACATAGGTCTCATAAAACTATTTTAAGCTGATCT
GCCTATAATGCCATAGAAGAAGCTCCATTGTGACTTATTTCTGGTCTGAT
TTGAGCTTTTACAGCAAAAGAAATTGAAAAGGTATAACCAGTTAGTTTCA
AGATACAAAAAGTTTCAAAGAGTGTATGAAAAGATTGGGCTGCCAAAATA
AAGGATGTACACGAGGGGTTCTATTAAAGATTCTACTTTCATTTTTTTCC
AGTCTTTACAAAGAATTTCTGAATTTGAATCCCAACCGGTTGGTAAACTG
TCTATCAGAAATGCAACAGAAGTATGAGATTGATTCATTCCTTCAGTTGG
TCTTACAACTTTACTGCAAGCATTTCAATGTTCAAGAACCAGAGATTGCT
TCCAGTGCCATCGATATGCTTTTCATACATTTAGAGCTTTCTGCAGAAAT
GCTTCATAAACCTTGCCAGTAAGTGCCTTTTCTTAGAGTTATTAAAAATT
GCTTTCAAGAACTCTGAAGCCATGGGATAGAGCCATCAGGAAGCCATAAA
GAAGGCAGCTCTTAAGTAAATTGTATTTATAAAAATGGAGAAGAAATCCT
ATGAGAGCCAAGTCTTATCTATTATAAGAGGGATAATGTACATAATATGC
CGGAGCAACTTTTTAAAATAGATTTTCATTTAATTTCAGATACTTGGTTG
ATGCTTTTGTCAAATTAAACGATGACAATGAAAGTGCTGCTGAAGAATTA
AGTAGACTGATCAAAATCATCTCCAAAAGGTTTGTTTCTATCTTCATTTA
ATACAACATTCTTTCACCATCAAAATACTACAGTGTTTAATGCATGAAAG
GCTTTACTTACTAATAAGAAATAAATCTGCTTTCCTCCAAAGTGTAGATT
ATGTTTTATGTAATGTACCTTCAGGGAAGTAACTCTAGTGAAAACTTTTT
TTGTGGTACAATGGTACGAAGTAAGCAATTTTGCCAGCGTTTTGCCAAAA
GTTAGAATTTAAGTAAAACTGCTGGTTTTCACAGAACAAATTTTTGAGGT
AGACGACTGAAGCCACAAAAATTAGCTCTTACAAAAATGATTTCTTAAAA
AAATTATTTACGATGAGTTAGTAATATAATTATTATAAACCATAATTACA
AACGATATTTCCCTTAATAAGGTATGTCATTCTCATTTCATAGATTTCCA
ACAGCTTTTGATGGTTGCATTGATACAAAGTTCAAGGAGCATGAAGAGAA
CCCATCAGCCATTGAACAACTAAAAATTTTAACCAGAATTTGCTTGAGTG
AAGAGAAATCAAAAGTGATAGGAAACGCTGAACTACCCCTTGTTGTTTGC
TTAAACCATCCTGAGAAACAGTTACGATTGATGGCTACAAAACAGCTGTT
TGAGATTTTCAAATCTGGTGTTTATTCTGAAGATCCTTCATTCTTTCAAG
AGGGCGTCATCAGCAGATTGCAGGATGATGAGCCAGCTGTGGTAAAAGAG
TGTCTGAGCCATCCAAAATCACTTTTGAAGATTCTCTCTAAAGATGATGT
CCATATTGTCTTGGAAAAGTTATCTGAGCGAGCTGATGATACCTACAACT
TGAGTCCCTTGTATATGAGGGTGTTACAAGATGTAGATCAAAATAGTACT
GCTGATCAAAAGTTATTCTTCATGGTTTTATCTCAAGTTTTCACATCAAT
CACAAGTAAAAAATTAAATGCAGTTTTTGAATTTTTCAACAACAAAGAGT
ATAACATCGACAATCACATCTTGAAAGCAATCAAAACCACACTTTCATCC
CATGGTGGTGTCAAAGTCAAAGATGAAGCCAAGCTACTACAGCTTAATCG
AACCTTGATGATGAACGTTGCAGAAAGTTATGATTTGGATTCATTCAAAA
TTCTTTGGCAGTTCCAGTCCTCTCTACATTCTGATCACATTCTGAAATTT
ATCTCAAATCTGATCTTATTGATCAACACTTTATCTGGCAAATTTGGAGT
AAATGAAGCTGCTTGTTTTGGACTGTCGAGAGATGTTGTTGCTTCTCTTG
ATGTCGATAACTTTTTAGAGAATGACCCAGTTCCATTCATGTTGGAAATG
TTTGTAGATGGTATCAAACGAAATCGAAAGTTTGATGTTTCATTGACCAG
TCTTTGTAATGCATTCTTTGTGAAGGTCTTGATCCAGAAAATTTCAGGTC
AGTCAACTTTCTCGTCTTTTTGATTGCCCTAAAGTTATAAGGTTGTGTTC
AAGTGCTGTCTCTCAATTATTATTTTTTATGTCTGATAGCTTTGCCTTTT
AACGTATTAACAGAATACTGAAGCAGATGCTATCAAATTAGATTTAATAA
TTCCTTTTTCTCAACAAACTGGCCTTGTACATTGGTTTAAAGCTCCAAGT
AATTTNTTACAAGATGTAGATCAAAATAGTACTGCTGATCAAAAGTTATT
CTTCATGGTTTTATCTCAAGTTTTCACATCAATCACAAGTAAAAAATTAA
ATGCAGTTTTTGAATTTTTCAACAACAAAGAGTATAACATCGACAATCAC
ATCTTGAAAGCAATCAAAACCACACTTTCATCCCATGGTGGTGTCAAAGT
CAAAGATGAAGCCAAGCTACTACAGCTTAATCGAACCTTGATGATGAACG
TTGCAGAAAGTTATGATTTGGATTCATTCAAAATTCTTTGGCAGTTCCAG
TCCTCTCTACATTCTGATCACATTCTGAAATTTATCTCAAATCTGATCTT
ATTGATCAACACTTTATCTGGCAAATTTGGAGTAAATGAAGCTGCTTGTT
TTGGACTGTCGAGAGATGTTGTTGCTTCTCTTGATGTCGATAACTTTTTA
GAGAATGACCCAGTTCCATTCATGTTGGAAATGTTTGTAGATGGTATCAA
ACGAAATCGAAAGTTTGATGTTTCATTGACCAGTCTTTGTAATGCATTCT
TTGTGAAGGTCTTGATCCAGAAAATTTCAGGTCAGTCAACTTTCTCGTCT
TTTTGATTGCCCTAAAATTATAAGGTTGCGTTCAAGTGATGTCTCTCAAT
TATTATTTTTTATGTCTGATAGTTTTGCCTCTTAACGTCTTAACAAAATA
CTGAAGCAGATGCTATCAAATTAGATTTAATAATTCCTTTTTCTCAACAA
ACTGGCCTTGTACATTGGTTTAAAGCTCCAAGTAATTTTAGTAGGATCTG
TCTCATCTTAACGAAAGACTGTTTTAAAAAGGTTTCTTATTTTACAGAAA
ACAAAGATGAATTTGATGAAGTTAAACAGAACATCTTCAAGACCATTGTC
CCTTTTGCTACCAATAAAAAGTCAAATGCTTTAAGCAACACTTGTCGTGA
ACTAACGAAAACGTTTTTCCAGGTAAGAAGATAGCATCAGGAAAAATTGA
TGATTTGTAAAATTCATACCATAGTCATTATAAAAAAGACCCGGTCTGGC
AATGTCTTGTTTTACCTTTTTGTTCAATTTTCTTTTGTTACAAACAAAAG
ATAAGTTGCGATTTGCATACTTTTTGATAACGTTACCAAAATCTCCTCTT
GGGATTGGTCTATTTTGTACATTAACTTGTAATCATAGCTATAAAAGTTG
ATGTTTTTGCTAAGAATATTTCATACACTTTAAATTTATTTGTTCCATCT
TTCAAGACATGTTTCCAAGATACAGAACAAGTCCGTCTGTTCACCGGCCA
ACTATGTATCAACGAACTATTTGCGAACCAAAACATCAGCAAGGTGGATT
TGGAAATTTCGTTGAGCTGTTTATCAATTGTTGGTCTGTTGGTTGAAAGT
GCTGAGAATGCAGCAATCACTGATCTGGGTATGAACGTAATATTGATATT
GATCTATTAAAATTCTGTTATAAAAGAGGATGGTTGTGTTTGAAACTTCC
AGAAATTGAATAAAGGGTATTGGGAGTTAGCTATAGACGATGAGGACCAG
GAATAAAGTCATATCTATCTGAAGGCATTTGACTTAACAGAAATTTGCCA
AAATTTGACAAAGTTTTCTTTTTAAATTTTGTAAATTTTGTTTGAAGCGC
TAGAAATGCAGCAAAGACTGTAAAAACGAACTTTTAGACTTACAATACTT
TGTTTTTCAATTTAAGAAATTGGACTACAAATCGGCTTATTATCCTTCCC
AAACAAGACAGTACGAGAAGTAGTGTGCGACATAATGGCGAAATATGGTG
AAGTATTGAAGTCAAATCATCCTTGGTCATTCTTCACAAATCTTGTTGTG
GAAAATACTAACGAAATCGTTTTGGATGATACCCATGCTAAAAGGTAAAA
GAAATTAATTTTCTTTGGCTGTAGAAAAAAATATCAAAAGAGAAGTATCA
TTAAACAATTTTCTTTACCTTTTTTAGCAAAAGACAATCTATTTCAATAT
TCTGAGTGTCGGAGTTATAAAAACTTTTGTGTTCATCTTTCTAACGAGTA
TTTTTATCAGCCAAATAGTTTGAGTGAAGAAATTCTTCTTGTCCACTTAA
AATGAACTAAAAGATTTAATACCATAACATTTTTATTAGGATGTTTGGCT
CTACACTGAAAGCATCTTCAACTCGGAGAAAAAGTGAATTTGATATGTTC
TCTAAGAAGGATATACCAAAGAAAGAAAAACGAAAGACTGCAGCATCAGA
ACATTGTATCTCTTGTTTGGTTAAATGGCCAGCACTGGTATCTTCAAGAG
TCTTGGATGTTATCCAGTTTGCTTCTCTCCCTGATGTAAGATTCTATTTT
TATACCCTATTGAAGCCCAAAATACCTTAAAAAACCTCCTGAAAGCCTAG
ATTTTATTAATAATATGCAAAAATAAAACCACTTAAGAAAGAGATTAATG
CATTTTCGCTCATGCGGAACTATAAACTTAAGTTTGCATTAGTATTTGTT
ATAACTTTTATCAAATTTTTGTCTTCCATATAGGAGCTGTTACAGAAGTA
CCAGAGTATTGAAGAACTCCAGAGTGTTCCAACCACCTTGAAATTTTANG
CCAACTATGTATCAACGAACTATTTGCGAACCAAAACATCAGCAAGGTGG
ATTTGGAAATTTCTTTGAGCTGTTTATCAATTGTTGGTCTGTTGGTTGAA
AGTGCTGAGAATGCATCAATCACTGATCTGGGTATGAACGTAATATCGAT
AGTGATCTATTAAAATTCTGTTATAAAAGAGGATGGTTGTGTTTGAAACT
TCCAGAAATTGAATAAAGGGTATTGGGAGTTAGCTATAGACGATGAGGAC
CAGGAATAAAGTCATATCTATCTGAAGGCTTTTGACTTAACAGAAATTTG
CCAAAATTTGACAAAATTTTCTTTTTAAATTTTGTAAATTTTGTTTGAAG
AGCTAGAAATGCAGCAAAGACTGTAAAAACGAACTTTTAGACTTACAATA
CTTTGTTTTTCAATTTAAGAAATTGGACTACAAATCGGCTTATN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041329XLOC_041329Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066002-exon-scaffold_448-1575043694:703423..704290TCONS_00066002-exon-scaffold_448-1575043694:703423..704290Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1575043694:701910..702056TCONS_00066002-exon-scaffold_448-1575043694:701910..702056Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1575043694:701423..701638TCONS_00066002-exon-scaffold_448-1575043694:701423..701638Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1575043694:701112..701201TCONS_00066002-exon-scaffold_448-1575043694:701112..701201Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1575043694:699694..700697TCONS_00066002-exon-scaffold_448-1575043694:699694..700697Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1575043694:698519..698643TCONS_00066002-exon-scaffold_448-1575043694:698519..698643Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1575043694:698063..698234TCONS_00066002-exon-scaffold_448-1575043694:698063..698234Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1575043694:696447..696471TCONS_00066002-exon-scaffold_448-1575043694:696447..696471Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1510915933:703423..704290TCONS_00066002-exon-scaffold_448-1510915933:703423..704290Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1510915933:701910..702056TCONS_00066002-exon-scaffold_448-1510915933:701910..702056Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1510915933:701423..701638TCONS_00066002-exon-scaffold_448-1510915933:701423..701638Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1510915933:701112..701201TCONS_00066002-exon-scaffold_448-1510915933:701112..701201Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1510915933:699694..700697TCONS_00066002-exon-scaffold_448-1510915933:699694..700697Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1510915933:698519..698643TCONS_00066002-exon-scaffold_448-1510915933:698519..698643Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1510915933:698063..698234TCONS_00066002-exon-scaffold_448-1510915933:698063..698234Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1510915933:696447..696471TCONS_00066002-exon-scaffold_448-1510915933:696447..696471Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1491911889:703423..704290TCONS_00066002-exon-scaffold_448-1491911889:703423..704290Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1491911889:701910..702056TCONS_00066002-exon-scaffold_448-1491911889:701910..702056Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1491911889:701423..701638TCONS_00066002-exon-scaffold_448-1491911889:701423..701638Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1491911889:701112..701201TCONS_00066002-exon-scaffold_448-1491911889:701112..701201Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1491911889:699694..700697TCONS_00066002-exon-scaffold_448-1491911889:699694..700697Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1491911889:698519..698643TCONS_00066002-exon-scaffold_448-1491911889:698519..698643Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1491911889:698063..698234TCONS_00066002-exon-scaffold_448-1491911889:698063..698234Clytia hemisphaericaexon
TCONS_00066002-exon-scaffold_448-1491911889:696447..696471TCONS_00066002-exon-scaffold_448-1491911889:696447..696471Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:696447..704290 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000815891	0.89396	0.843137	0.603995	15.1953	7.96735	9.46329	8.57924	2.23667	4.15852	1.72096	1.52798	2.5469	5.23358	2.06706	4.23338	3.57048	3.59286	1.79064	1.14863	5.6797	7.54323	5.98641	7.89033	5.36798	6.42394	2.10721	2.03707	9.34038	7.40452
Blast
[Close]
BLAST of TCONS_00066002 vs. Swiss-Prot (Human)
Match: HEAT1 (HEAT repeat-containing protein 1 OS=Homo sapiens GN=HEATR1 PE=1 SV=3)

HSP 1 Score: 199.904 bits (507), Expect = 2.203e-52
Identity = 108/306 (35.29%), Postives = 188/306 (61.44%), Query Frame = 2 
Query:   14 MTSLATQLKQLQIPGLQQTVGKVSHV-SILFDKEVAATLDMESIYNIGTSGFQQIVSVDPIFQDYEDILFSQKSLHLQRTMESKDINNRIHKAVDEFLVFLSPYLQLQAAKKCLEWLIWRFQIHNFERDSLIRCILPYHETQIFSRIIQLVHMTNYGTIWEHLLPKLKQGGTINTTTLLKHCRSNLNLLSFIFDMAQQASHLLKKEPKSG--LQVVFSFYSRTIC-GVISEEKLNIEVIERVMSMVEVGMNSNSSDFICSTYMVITMFVSNNRQLKSKAKASLMIRILKSMG--IANYEYGLMCLL 913
            MTSLA QL++L +P    ++     V S+LFD + AAT+D ++ + IG +G ++++ +DP F+ +E  LFSQ +  L+R++++K +N ++ + +  FL+ LSPY  L+ A+KCLEWLI RF IH + +DSLI C+LPYHET+IF R+IQL+ + N    W  LLP  + G  +   TL+ HC  +L  + FI  +  ++  +  + P S   L+V+ +FY+ TI   +++ E ++  +I ++   ++ G+ S+  D+  +TYM+I   +S    +++    SL  +I+K++    +  + GL CL+
Sbjct:    1 MTSLAQQLQRLALPQSDASLLSRDEVASLLFDPKEAATIDRDTAFAIGCTGLEELLGIDPSFEQFEAPLFSQLAKTLERSVQTKAVNKQLDENISLFLIHLSPYFLLKPAQKCLEWLIHRFHIHLYNQDSLIACVLPYHETRIFVRVIQLLKINNSKHRWFWLLPVKQSGVPLAKGTLITHCYKDLGFMDFICSLVTKSVKVFAEYPGSSAQLRVLLAFYASTIVSALVAAEDVSDNIIAKLFPYIQKGLKSSLPDYRAATYMIICQ-ISVKVTMENTFVNSLASQIIKTLTKIPSLIKDGLSCLI 305
The following BLAST results are available for this feature:
BLAST of TCONS_00066002 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEAT12.203e-5235.29HEAT repeat-containing protein 1 OS=Homo sapiens G... [more]
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