XLOC_041329 (gene) - C. hemisphaerica

Overview
NameXLOC_041329
Unique NameXLOC_041329
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_448:696447..704290-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041329 ID=XLOC_041329|Name=XLOC_041329|organism=Clytia hemisphaerica|type=gene|length=7844bp|location=Sequence derived from alignment at scaffold_448:696447..704290- (Clytia hemisphaerica)
NNAAATAACAAAAATGACATCATTAGCTACACAACTGAAACAGTTGCAAA TCCCTGGATTACAACAAACAGTTGGCAAAGTCAGCCATGTTTCAATCCTT TTTGACAAAGAAGTTGCTGCCACCCTTGATATGGAGTCTATCTACAACAT TGGTACAAGTGGATTTCAGCAGATTGTATCGGTCGATCCTATTTTCCAGG ATTACGAAGACATCCTTTTCTCACAAAAGTCTTTGCATTTGCAGAGAACA ATGGAAAGTAAAGATATTAATAACAGAATTCATAAGGCTGTTGATGAGTT CCTAGTTTTCTTGTCTCCTTACTTACAACTTCAAGCTGCCAAGAAATGTC TAGAATGGCTCATTTGGAGATTTCAGATTCACAATTTTGAGCGTGATTCA TTGATTAGATGTATTCTACCATACCATGAAACGCAAATCTTCTCCAGGAT CATCCAGCTTGTCCATATGACAAACTATGGTACCATTTGGGAGCATTTGC TACCAAAATTAAAACAAGGTGGTACGATCAACACAACAACTTTGTTAAAA CATTGTAGATCCAATTTGAATTTGTTGTCATTCATTTTTGATATGGCACA ACAAGCAAGTCATCTTTTGAAGAAAGAACCTAAATCTGGGTTGCAAGTTG TGTTTTCGTTCTACTCAAGAACCATTTGTGGGGTCATCAGTGAAGAGAAG CTTAACATTGAAGTCATTGAAAGGGTCATGTCCATGGTTGAAGTGGGAAT GAATTCAAATAGTTCAGATTTCATTTGCTCAACCTACATGGTCATCACTA TGTTTGTTTCAAATAACCGGCAACTGAAGTCCAAAGCAAAAGCAAGTCTT ATGATCAGAATTTTAAAGGTTTGTTTTTTGATTTGTTGTCAATGATTGAA ACTAATTATTTCCTTTTGATTAAGTTATGTTATTGTTATTGATATTGATA TTAACTGATTTTTTGTTCTTTGCGAGGCTGCAAGGGAAAGCTTGGTTGAA ATCAAATCTTTCAGCCAATTCGATTGACTTCAAAATTTGCCAATTTTGCC CTTGAAATTGACATTGAAATTGTGGATTTGGCAAAGTTGGCGAGTATGGT AAATTTTTAAGTCAATCGAATTGGCTGTTGGTATTGCATTCAATTTCATT TTATGATGGAACTAGTTCTGCTCCATAAAAAAATTGTTCATTATCGATGA CAATACATAAAACAACATATAATACCGGGTGACCCACGAAAAAGGTGACC CACGAAAAAGTTCGGACAGTTTGTCTCAAATGTCTCAAAGTTTAAAAGAG GTATCAAATTGTTTTATTATCAATCAATCAAACAAGGTCCTTAAATCGTT AGAAAAGAGCATGTTAGATATTTTTATTCAATTTTAAAACTTTTTTTAGA TTCTTTACTTTCACAAAATTTATTAACAAGTTNACTATCTTGATTTAATA AAACATTCTTTCACCATCAAAATACTACAGTGTTTAATGCATGGAAGGCT TTACTTACTAATAAGAAATAATCTTGACAAGGTAAATCTGCTTTCCTCCA AAGTGTAGATTATGTTTTATGTAATGTACCTTCAGGGCAGGGGGGGGTCA TGCAGTTATTATATAAACACTATGACAATTACTACCGTGGTGGTATATAA ACCAAAATTTGGGAAAACAGTTACTCCACCAGTGGACTAACTNTTTCTAG CATATTCCAGGCAAACCCACACTCTCTGTTCTTTCATAAGACACGACATT TTCATAAAGAAGGCAAATTATGCCTATTTATAAAATATTTTTGATAAAAA TATTTACAATAAATTTATATAAATCTACTTCGTTGTTAATTTATTATTTT ACAAACTTTAATTACCTACAACACTAATTAACGAGGTCATAAAACATCAG CACACTCGAAAAACACAATGTTAAAGATAAAAAAAACATTTATAATTTGA TACCACATTTTTGACGTGTTTTTGCACTTTCCGATGATTGAATTTTGACT TTAAAAGCTCATAAATGAAGAACCAACTGAACCAAATTTAAAAAGTAATA GCTCAAAGTTTAAGTTAGAGCATCCTCTATCTTTCAAAAAAAAGATTGAG TTTATATTACCTTTATTTCAGACCCTAGCCAACGAAAACCGTCCGAACTT TTTCGTGGGTCACCCGGTATATTTTCTTGTTTTTAAAGGGCTTGTGAAAT AGCATGCTATCATAGATATTATTCTTTTTTTCAGTCAATGGGAATTGCAA ATTATGAATATGGCTTGATGTGCCTGCTGAGTATAACTCATCTCTCCAGC TTTACCTCTTTACCAGAANTATGGCTTGATGTGCCTACTGAGTATAACTC ATCTCTCCAGCTTTACCTCTTTACCAGAAAGGTATTAAAAACTGGCTGAA ATCATAAAACTTATCTACATAGGTCTCATAAAACTATTTTAAGCTGATCT GCCTATAATGCCATAGAAGAAGCTCCATTGTGACTTATTTCTGGTCTGAT TTGAGCTTTTACAGCAAAAGAAATTGAAAAGGTATAACCAGTTAGTTTCA AGATACAAAAAGTTTCAAAGAGTGTATGAAAAGATTGGGCTGCCAAAATA AAGGATGTACACGAGGGGTTCTATTAAAGATTCTACTTTCATTTTTTTCC AGTCTTTACAAAGAATTTCTGAATTTGAATCCCAACCGGTTGGTAAACTG TCTATCAGAAATGCAACAGAAGTATGAGATTGATTCATTCCTTCAGTTGG TCTTACAACTTTACTGCAAGCATTTCAATGTTCAAGAACCAGAGATTGCT TCCAGTGCCATCGATATGCTTTTCATACATTTAGAGCTTTCTGCAGAAAT GCTTCATAAACCTTGCCAGTAAGTGCCTTTTCTTAGAGTTATTAAAAATT GCTTTCAAGAACTCTGAAGCCATGGGATAGAGCCATCAGGAAGCCATAAA GAAGGCAGCTCTTAAGTAAATTGTATTTATAAAAATGGAGAAGAAATCCT ATGAGAGCCAAGTCTTATCTATTATAAGAGGGATAATGTACATAATATGC CGGAGCAACTTTTTAAAATAGATTTTCATTTAATTTCAGATACTTGGTTG ATGCTTTTGTCAAATTAAACGATGACAATGAAAGTGCTGCTGAAGAATTA AGTAGACTGATCAAAATCATCTCCAAAAGGTTTGTTTCTATCTTCATTTA ATACAACATTCTTTCACCATCAAAATACTACAGTGTTTAATGCATGAAAG GCTTTACTTACTAATAAGAAATAAATCTGCTTTCCTCCAAAGTGTAGATT ATGTTTTATGTAATGTACCTTCAGGGAAGTAACTCTAGTGAAAACTTTTT TTGTGGTACAATGGTACGAAGTAAGCAATTTTGCCAGCGTTTTGCCAAAA GTTAGAATTTAAGTAAAACTGCTGGTTTTCACAGAACAAATTTTTGAGGT AGACGACTGAAGCCACAAAAATTAGCTCTTACAAAAATGATTTCTTAAAA AAATTATTTACGATGAGTTAGTAATATAATTATTATAAACCATAATTACA AACGATATTTCCCTTAATAAGGTATGTCATTCTCATTTCATAGATTTCCA ACAGCTTTTGATGGTTGCATTGATACAAAGTTCAAGGAGCATGAAGAGAA CCCATCAGCCATTGAACAACTAAAAATTTTAACCAGAATTTGCTTGAGTG AAGAGAAATCAAAAGTGATAGGAAACGCTGAACTACCCCTTGTTGTTTGC TTAAACCATCCTGAGAAACAGTTACGATTGATGGCTACAAAACAGCTGTT TGAGATTTTCAAATCTGGTGTTTATTCTGAAGATCCTTCATTCTTTCAAG AGGGCGTCATCAGCAGATTGCAGGATGATGAGCCAGCTGTGGTAAAAGAG TGTCTGAGCCATCCAAAATCACTTTTGAAGATTCTCTCTAAAGATGATGT CCATATTGTCTTGGAAAAGTTATCTGAGCGAGCTGATGATACCTACAACT TGAGTCCCTTGTATATGAGGGTGTTACAAGATGTAGATCAAAATAGTACT GCTGATCAAAAGTTATTCTTCATGGTTTTATCTCAAGTTTTCACATCAAT CACAAGTAAAAAATTAAATGCAGTTTTTGAATTTTTCAACAACAAAGAGT ATAACATCGACAATCACATCTTGAAAGCAATCAAAACCACACTTTCATCC CATGGTGGTGTCAAAGTCAAAGATGAAGCCAAGCTACTACAGCTTAATCG AACCTTGATGATGAACGTTGCAGAAAGTTATGATTTGGATTCATTCAAAA TTCTTTGGCAGTTCCAGTCCTCTCTACATTCTGATCACATTCTGAAATTT ATCTCAAATCTGATCTTATTGATCAACACTTTATCTGGCAAATTTGGAGT AAATGAAGCTGCTTGTTTTGGACTGTCGAGAGATGTTGTTGCTTCTCTTG ATGTCGATAACTTTTTAGAGAATGACCCAGTTCCATTCATGTTGGAAATG TTTGTAGATGGTATCAAACGAAATCGAAAGTTTGATGTTTCATTGACCAG TCTTTGTAATGCATTCTTTGTGAAGGTCTTGATCCAGAAAATTTCAGGTC AGTCAACTTTCTCGTCTTTTTGATTGCCCTAAAGTTATAAGGTTGTGTTC AAGTGCTGTCTCTCAATTATTATTTTTTATGTCTGATAGCTTTGCCTTTT AACGTATTAACAGAATACTGAAGCAGATGCTATCAAATTAGATTTAATAA TTCCTTTTTCTCAACAAACTGGCCTTGTACATTGGTTTAAAGCTCCAAGT AATTTNTTACAAGATGTAGATCAAAATAGTACTGCTGATCAAAAGTTATT CTTCATGGTTTTATCTCAAGTTTTCACATCAATCACAAGTAAAAAATTAA ATGCAGTTTTTGAATTTTTCAACAACAAAGAGTATAACATCGACAATCAC ATCTTGAAAGCAATCAAAACCACACTTTCATCCCATGGTGGTGTCAAAGT CAAAGATGAAGCCAAGCTACTACAGCTTAATCGAACCTTGATGATGAACG TTGCAGAAAGTTATGATTTGGATTCATTCAAAATTCTTTGGCAGTTCCAG TCCTCTCTACATTCTGATCACATTCTGAAATTTATCTCAAATCTGATCTT ATTGATCAACACTTTATCTGGCAAATTTGGAGTAAATGAAGCTGCTTGTT TTGGACTGTCGAGAGATGTTGTTGCTTCTCTTGATGTCGATAACTTTTTA GAGAATGACCCAGTTCCATTCATGTTGGAAATGTTTGTAGATGGTATCAA ACGAAATCGAAAGTTTGATGTTTCATTGACCAGTCTTTGTAATGCATTCT TTGTGAAGGTCTTGATCCAGAAAATTTCAGGTCAGTCAACTTTCTCGTCT TTTTGATTGCCCTAAAATTATAAGGTTGCGTTCAAGTGATGTCTCTCAAT TATTATTTTTTATGTCTGATAGTTTTGCCTCTTAACGTCTTAACAAAATA CTGAAGCAGATGCTATCAAATTAGATTTAATAATTCCTTTTTCTCAACAA ACTGGCCTTGTACATTGGTTTAAAGCTCCAAGTAATTTTAGTAGGATCTG TCTCATCTTAACGAAAGACTGTTTTAAAAAGGTTTCTTATTTTACAGAAA ACAAAGATGAATTTGATGAAGTTAAACAGAACATCTTCAAGACCATTGTC CCTTTTGCTACCAATAAAAAGTCAAATGCTTTAAGCAACACTTGTCGTGA ACTAACGAAAACGTTTTTCCAGGTAAGAAGATAGCATCAGGAAAAATTGA TGATTTGTAAAATTCATACCATAGTCATTATAAAAAAGACCCGGTCTGGC AATGTCTTGTTTTACCTTTTTGTTCAATTTTCTTTTGTTACAAACAAAAG ATAAGTTGCGATTTGCATACTTTTTGATAACGTTACCAAAATCTCCTCTT GGGATTGGTCTATTTTGTACATTAACTTGTAATCATAGCTATAAAAGTTG ATGTTTTTGCTAAGAATATTTCATACACTTTAAATTTATTTGTTCCATCT TTCAAGACATGTTTCCAAGATACAGAACAAGTCCGTCTGTTCACCGGCCA ACTATGTATCAACGAACTATTTGCGAACCAAAACATCAGCAAGGTGGATT TGGAAATTTCGTTGAGCTGTTTATCAATTGTTGGTCTGTTGGTTGAAAGT GCTGAGAATGCAGCAATCACTGATCTGGGTATGAACGTAATATTGATATT GATCTATTAAAATTCTGTTATAAAAGAGGATGGTTGTGTTTGAAACTTCC AGAAATTGAATAAAGGGTATTGGGAGTTAGCTATAGACGATGAGGACCAG GAATAAAGTCATATCTATCTGAAGGCATTTGACTTAACAGAAATTTGCCA AAATTTGACAAAGTTTTCTTTTTAAATTTTGTAAATTTTGTTTGAAGCGC TAGAAATGCAGCAAAGACTGTAAAAACGAACTTTTAGACTTACAATACTT TGTTTTTCAATTTAAGAAATTGGACTACAAATCGGCTTATTATCCTTCCC AAACAAGACAGTACGAGAAGTAGTGTGCGACATAATGGCGAAATATGGTG AAGTATTGAAGTCAAATCATCCTTGGTCATTCTTCACAAATCTTGTTGTG GAAAATACTAACGAAATCGTTTTGGATGATACCCATGCTAAAAGGTAAAA GAAATTAATTTTCTTTGGCTGTAGAAAAAAATATCAAAAGAGAAGTATCA TTAAACAATTTTCTTTACCTTTTTTAGCAAAAGACAATCTATTTCAATAT TCTGAGTGTCGGAGTTATAAAAACTTTTGTGTTCATCTTTCTAACGAGTA TTTTTATCAGCCAAATAGTTTGAGTGAAGAAATTCTTCTTGTCCACTTAA AATGAACTAAAAGATTTAATACCATAACATTTTTATTAGGATGTTTGGCT CTACACTGAAAGCATCTTCAACTCGGAGAAAAAGTGAATTTGATATGTTC TCTAAGAAGGATATACCAAAGAAAGAAAAACGAAAGACTGCAGCATCAGA ACATTGTATCTCTTGTTTGGTTAAATGGCCAGCACTGGTATCTTCAAGAG TCTTGGATGTTATCCAGTTTGCTTCTCTCCCTGATGTAAGATTCTATTTT TATACCCTATTGAAGCCCAAAATACCTTAAAAAACCTCCTGAAAGCCTAG ATTTTATTAATAATATGCAAAAATAAAACCACTTAAGAAAGAGATTAATG CATTTTCGCTCATGCGGAACTATAAACTTAAGTTTGCATTAGTATTTGTT ATAACTTTTATCAAATTTTTGTCTTCCATATAGGAGCTGTTACAGAAGTA CCAGAGTATTGAAGAACTCCAGAGTGTTCCAACCACCTTGAAATTTTANG CCAACTATGTATCAACGAACTATTTGCGAACCAAAACATCAGCAAGGTGG ATTTGGAAATTTCTTTGAGCTGTTTATCAATTGTTGGTCTGTTGGTTGAA AGTGCTGAGAATGCATCAATCACTGATCTGGGTATGAACGTAATATCGAT AGTGATCTATTAAAATTCTGTTATAAAAGAGGATGGTTGTGTTTGAAACT TCCAGAAATTGAATAAAGGGTATTGGGAGTTAGCTATAGACGATGAGGAC CAGGAATAAAGTCATATCTATCTGAAGGCTTTTGACTTAACAGAAATTTG CCAAAATTTGACAAAATTTTCTTTTTAAATTTTGTAAATTTTGTTTGAAG AGCTAGAAATGCAGCAAAGACTGTAAAAACGAACTTTTAGACTTACAATA CTTTGTTTTTCAATTTAAGAAATTGGACTACAAATCGGCTTATN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066003TCONS_00066003Clytia hemisphaericatranscript
TCONS_00066002TCONS_00066002Clytia hemisphaericatranscript
TCONS_00066001TCONS_00066001Clytia hemisphaericatranscript
TCONS_00066000TCONS_00066000Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066003-proteinTCONS_00066003-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:696447..704290 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.42 6.22 3.07 1.71 46.73 32.1 26.32 30.26 13.74 17.77 16.67 12.1 19.49 24.65 18.62 26.57 18.14 21.5 4.78 5.39 25.83 25.57 27.53 33.89 24.07 28.75 8.55 8.04 32.14 35.67