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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066084 ID=TCONS_00066084|Name=TCONS_00066084|organism=Clytia hemisphaerica|type=transcript|length=1007bp
GTGtccaaaagtttttgttttatttgaattttgcaTTTCTTTTTCAGGTT
AATGGTGTTCATCAAACAATACGagagttttttacaaaaatattacaaGA
ACGCTTCAAGTACGTACACCACGCTTCAACTTCTAGAAAACATTCTGCTA
AATATTTTACCGAACACAGCAGCTCAATCAGCGCCTGGTTTAATGGGTGT
TTTTACTGTCTAGGTATGATTTATCATATTTATCTCTTTGAATAAAGCGG
TGGTTGCACGTAGCCGGGGTGAATTTCACTCCGTTCTATTAAGAAAACAC
TGTTTCTGTATTCACATATTTAGGCGGGATGAAATTTGTTtaatgattta
ttttgcaaatttttgaagatttttacaAGTATACACCATTCTTTGTTTAA
CCCCGGATTGAAAAAAATGTGCGTCtattttggttttaatttttcacccc
ggattgaaaataagtttaaaGTTTTCACCTGGggctggaaaaaagtgttt
ccaACCTACCTCTCGCCGTTGTGTATCACCAAATGACTTTTACCATGGGT
TGAAGTATTTATCCATTTAACCCCGTACGTGTAACCACCGCCTAAGAATA
AGAATGTCCcgggtgaaaaattaattagcgcaATACCTAACTTAATTGTC
TATGACACTGAGTTAGATCCATGGCTAACACGGATTTTTTCTGAATATTC
CGATGGTAGTATTTCTTATTTGGAAAATTGTACATATATTTTAGTAAGAC
ATACGCACATATTTATTGAAAGATTTAGGATAAGTGtttctttatcaatt
ttttcATGCTTTACTTTGGGTTTATCAATCTTTGATCAAAGACgttatcc
cagctggcacacaacgtcgttgttttcatgttcatctaacgttcacaacg
tccatataacgttagatgaacgttgaagcaacgttgtgtgccaactggga
tATTTGTGAAATAAGGAATGCAGAGTTTTAATATTAAAGGTTGAGAATAA
AACCTAC Run BLAST on NCBI transcript from alignment at scaffold_45:265708..266714 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066084 ID=TCONS_00066084|Name=TCONS_00066084|organism=Clytia hemisphaerica|type=transcript|length=1007bp|location=Sequence derived from alignment at scaffold_45:265708..266714 (Clytia hemisphaerica)
GTAGGTTTTATTCTCAACCTTTAATATTAAAACTCTGCATTCCTTATTTC
ACAAATatcccagttggcacacaacgttgcttcaacgttcatctaacgtt
atatggacgttgtgaacgttagatgaacatgaaaacaacgacgttgtgtg
ccagctgggataacGTCTTTGATCAAAGATTGATAAACCCAAAGTAAAGC
ATgaaaaaattgataaagaaaCACTTATCCTAAATCTTTCAATAAATATG
TGCGTATGTCTTACTAAAATATATGTACAATTTTCCAAATAAGAAATACT
ACCATCGGAATATTCAGAAAAAATCCGTGTTAGCCATGGATCTAACTCAG
TGTCATAGACAATTAAGTTAGGTATtgcgctaattaatttttcacccgGG
ACATTCTTATTCTTAGGCGGTGGTTACACGTACGGGGTTAAATGGATAAA
TACTTCAACCCATGGTAAAAGTCATTTGGTGATACACAACGGCGAGAGGT
AGGTtggaaacacttttttccagccCCAGGTGAAAACtttaaacttattt
tcaatccggggtgaaaaattaaaaccaaaataGACGCACATTTTTTTCAA
TCCGGGGTTAAACAAAGAATGGTGTATACTtgtaaaaatcttcaaaaatt
tgcaaaataaatcattaAACAAATTTCATCCCGCCTAAATATGTGAATAC
AGAAACAGTGTTTTCTTAATAGAACGGAGTGAAATTCACCCCGGCTACGT
GCAACCACCGCTTTATTCAAAGAGATAAATATGATAAATCATACCTAGAC
AGTAAAAACACCCATTAAACCAGGCGCTGATTGAGCTGCTGTGTTCGGTA
AAATATTTAGCAGAATGTTTTCTAGAAGTTGAAGCGTGGTGTACGTACTT
GAAGCGTTCttgtaatatttttgtaaaaaactctCGTATTGTTTGATGAA
CACCATTAACCTGAAAAAGAAAtgcaaaattcaaataaaacaaaaacttt
tggaCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066084-exon-scaffold_45-1491911889:265708..266714 | TCONS_00066084-exon-scaffold_45-1491911889:265708..266714 | Clytia hemisphaerica | exon |
| TCONS_00066084-exon-scaffold_45-1510915933:265708..266714 | TCONS_00066084-exon-scaffold_45-1510915933:265708..266714 | Clytia hemisphaerica | exon |
| TCONS_00066084-exon-scaffold_45-1575043694:265708..266714 | TCONS_00066084-exon-scaffold_45-1575043694:265708..266714 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:265708..266714 . |
Blast
The following BLAST results are available for this feature:
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