TCONS_00066155 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066155
Unique NameTCONS_00066155
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2743

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066155 ID=TCONS_00066155|Name=TCONS_00066155|organism=Clytia hemisphaerica|type=transcript|length=2743bp
GCTCTACGGAAGATTTAACACTTGAAGATCGTCTACCTATCCCTGTGGCT
CGTCTACACAAAAAGAATCCACTCGATTTAAAGAAGGAGATCGAAGCTGC
aaagaaagatattttctcatcCGCCCTTTCCAACAACACGACGCCCGGTG
GCGGTGGCGGTGGCGGAAACTCTCTTTATTTCACGCCCAAAGAAGAAGAA
GGGAACGATATCACTGTACGCCCTGTTTCTTTCAACCCGGACCAACAAGA
TCGAGTTAATCCGAGTAACAACTTTGGGAATGGGGATAGCGAAGAACTTT
TTGAACATTCAACGGAACTTGAGGAAGAAGAGGAAGAGGTCGAAGATAAC
GATGGTTACGTCATTGATTTCCTTCCCAAGCCTAAAGGTAAACCTGAACG
TCAAAACAAACATCGGTCAAGTCAATCCGATTCGGATTACGATTACAACC
CGATTAGTGAGGacgaaggagaagaagaagatgaagacaATTATTATGAA
GACGCCGATTTCGTGTATCCACGAGTTGACGTTGATAGCGAATTATACGG
GGACGATTTCTCTTGGAACCCAAATAACCGAAAACCACCCAAAAGGAAAC
GCACCCGCAAACCGTCAGGAGTGACACCTTCAGCTTCATCAACATCAGCA
ACAACGATGACAACGATAAAGAAACTAAAAGAAGATGACTTCGACCCTTT
CTTTGCACCTGATGAAGATGTTAAAAAACCGGCTCAAAGAAATAGAAGCA
CTTCTTCGACCAGCGATGGGAGACAGAAAAGCGTCAAATCAAACCTTGTT
GGAGGACTGGGGCCGAGTTCAAAAGCACCAATAAAAAAGAAGCCTAAAAC
CTCAACCACGAAGCAACNCTTGTTGGAGGACTAGGGCCGAGTTCAAAAGC
ACCAATAAAAAAGAAGCCTAAAACCTCAACCACGAAGCAACGGTTAGGGA
AATTGTTGAAATTGGACAAAACTGGTACCCGGTATGTAAGATGATGGTAA
TGAACATTTGTGAAACGTTCGTCTTTCTATTTAGATCGTTTTCGTCATGT
GCAatacccactgacctttatatatccctggaccaagctataccCGCctt
ctttgatcgaagtttttttgaattggtacccgtaaagaagccattaagaa
ttaacgtctaacggcgctatattatcaaaagttttcgagggaaagtagat
ctatatatcaaagattttgcttgactgggaatgagaaacttggtccaggg
tatataaaagTCAGTGGTAATACCCAAACGTAAAGTTGTAATTGAACTTT
TCAGCGAAATACCTAGACTATGCTCTAGTCGTGTCAAGAGTCGAAAGCTT
CCATCGTTTAATTGAGTTTAATTGATTTTTGGACGTTTTCAATACTTTTC
ACATCATAAGCATGCTAACTCATCTTATTACTAAGAATATCAACACTGAG
AAATATTCTTAGAAATAACATGACGAGTTATTCACAGATTTATTCTTTGG
GAGTGATGTTATTCCAAATTCGGAATGACGTAACAACGCATAAATCACAA
AATATAACTCGCGAATTATGGATCTTGATTTGACCTGCCAACTCGTTTTC
AATaaaccttatcggagtttttgtttttctaaaacagcgatgcattgttg
gattgtttcgggggtataacaatagaattccctccaggaattcctaagag
atttctattgtaatacccccgaagcaatcccacaatgcatggCGTTTTTA
GAAAAATCNggaattcctaagagatttctattgtaatacccccgaagcaa
tcccacaatgcatggcgtttttagaataattaaaaactccgataagatct
atgtCTAGTTTGTccctttgttttctttttaaacttttacctTTCAAGAT
atcgttgttttttataagaacattttaagaaattaATAATTTATTGTATG
TAATTAAGTGACGTAGTTTAATGATGTATGTTATTATATTCAGTAATGTT
TTTAATACCCAGTCTCTGTCGATGACCCGCCCTTCCGATTGTTTTGTTGT
TAGGGCGCCACCGCCACCGCCACTGCCCAACGTTCTTCtaagttttaagt
tttaatgCTGGTTTCcttcaatgggcttttccagaaaaaaaccgtacacc
ccctgttgaggagctccaaccttttgtgacctacccccttggaattccag
gcaattttaggatcatacccctctggaattccgaatttttacaaattttc
aatcactATCCGCTTTGGAATTTCCCCTtctttttgacggattttcgcct
acccttatggaattccactgcatttcaaaccttacccccttggaacggaa
atggacctcctcaacggGGAGGGTCCAATAACTTTCACATTATGTAGTTC
TTTGGTATGGTTTTTTCTATCACCGCTTCCTCAGAGCATCAAAATATAAA
ACTGCTCATTTTTATACGTGGCAACTTGAAAGTTTTATGATTTAACCTTT
ATGTTGAATCTACTTCTGTATATAagatataaacttttaattcCACTTGA
TCTATCTATACCTTGACTTGTTTTTCGTTTGAAATAATTGTGTAGTgttt
gttttagtttttatcTGTTATTCGGAGACTcaattgactctctctaattc
gatcttcacgggtccaaaaattttattttgtaaagAGTAATTTATTTAAG
CCACTTTCTAAGCCCCTttggaccaatattttagttcgaatta
Run BLAST on NCBI

protein sequence of TCONS_00066155-protein

>TCONS_00066155-protein ID=TCONS_00066155-protein|Name=TCONS_00066155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=293bp
STEDLTLEDRLPIPVARLHKKNPLDLKKEIEAAKKDIFSSALSNNTTPGG
GGGGGNSLYFTPKEEEGNDITVRPVSFNPDQQDRVNPSNNFGNGDSEELF
EHSTELEEEEEEVEDNDGYVIDFLPKPKGKPERQNKHRSSQSDSDYDYNP
ISEDEGEEEDEDNYYEDADFVYPRVDVDSELYGDDFSWNPNNRKPPKRKR
TRKPSGVTPSASSTSATTMTTIKKLKEDDFDPFFAPDEDVKKPAQRNRST
SSTSDGRQKSVKSNLVGGLGPSSKAPIKKKPKTSTTKQXLLED
Run BLAST on NCBI

transcript from alignment at scaffold_451:510556..519842+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066155 ID=TCONS_00066155|Name=TCONS_00066155|organism=Clytia hemisphaerica|type=transcript|length=9287bp|location=Sequence derived from alignment at scaffold_451:510556..519842+ (Clytia hemisphaerica)
GCTCTACGGAAGATTTAACACTTGAAGATCGTCTACCTATCCCTGTGGCT
CGTCTACACAAAAAGAATCCACTCGATTTAAAGTAAGTTCCTTTATTCGC
CATCTTTATTGAATCTTATCCGGAGGGGGgtgtactagggttgcgagctg
acgggtatgtgccgcccgactttcaacCCTCTGACCTTTAGcaggaattt
tacgacccttattgggactaatttgacttTGAAGGagcaaaaagtagaaa
ttttcctatttttctggcccttagtgggactgaaatttaattttctggtC
CCTTACAGGAACTTTaaggtctcaaaaaagacaCCATTAAGGGCGACACA
TACCCTTCATTACACGTACCCTTCATTCgtctaagtaccccccccccggg
aatcgTATAAACCGATCCCATGATTGAAATCAGTGAAATCGTAATTCAGA
TTGTgtttgtattcatgatatgcgccattgcaatgtcttccgtggactca
acagctgattggttgaaagtgacgtattgactgattttacgtcacctaca
accaatcagctgttgggtccatgatgtaatgtcagaagacatcgcagtgg
tgcatatcatgaattcctgGAAAAGACTTAGAAGAAGGAGGACCTATACT
TGTATGTAAACAGTTCTTTCCGAAATCTCGAAATCCAACAAGGttatgga
aaatttggcaaagtttgCCGTGTGCTGTTCATTTTCTGTATAAAAAACAC
TGCTgtagttctcaacttcagttgagctacaatctgacaatgtctgtctg
tctgtgtgtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggtg
tttttttcattttttgaaaattttgatttttggggcctggggacgagttt
ttcgccaaaacgaggctaaaactttgtggcagcctggagactttaaaaat
tgttgtatttagctgaaatttggcacacttgttccttgggtgaatatctg
gaagacttttttttcatttttcaaaaatcttgatttttggggcctgggga
cgagttttccgccaaaacgaggctaaaactttagagcAGAGCCTACAGGC
CTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNtgttccttgggtgaatatctgggggtct
acaattgggcttatgaataatttgaagccactgaagttgagcccagtgcg
ttgcgcacgttcgactattacaaattcaacttcaaaaaaaatgcTCATTT
TAACTGATTTTTCGTCCCCAATGGTAGGAAGGAGATCGAAGCTGCaaaga
aagatattttctcatcCGCCCTTTCCAACAACACGACGCCCGGTGGCGGT
GGCGGTGGCGGAAACTCTCTTTATTTCACGCCCAAAGAAGAAGAAGGGAA
CGATATCACTGTACGCCCTGTTTCTTTCAACCCGGACCAACAAGATCGAG
TTAATCCGAGTAACAACTTTGTGAGTGAAGTTAATTTTTCGAAGATCTAT
TTTTATCTGAAACTTTTAGtggtattttttttcgaaatttaagtTAGCTT
CTAAACTTTCAGGTAAAAtgtttctgaaaatttcaaccgAGTCCATCCTA
ATCTATCCCAGTCTCATTTTTGGGAGACGGGAGATATCTTTTCGGTCCAA
ATCTGTTGTAATGCCATATTCTGAGCTATGCCTTTTTTAATAGCATGCTG
CACTTTTTCTACACCTTCCTATAGAAAATCAATCGAGTTAATCCGAGTAG
ATTTACACTTGTGTAACTCTTTCTAATCAACTTTTTCCTTTCATTTCAGG
GGAATGGGGATAGCGAAGAACTTTTTGAACATTCAACGGAACTTGAGGAA
GAAGAGGAAGAGGTCGAAGATAACGATGGTTACGTCATTGATTTCCTTCC
CAAGCCTAAAGGTCTGTTTACACTTTTCTTCGAAACGCTTTTCAAGTCAT
CGATTTCCTTCCAAAACCTAAAGATCTGTTTACACTTTCCTTCGAAACAC
TTCCCGAGTCTTCGATTTCCTTCCAAAACCTAAAGGTCTGTTATTTTCAC
TTTTcgagtttgtttacattttaattGACAGACTTAAAGTTCTGTTTTCC
CTTTCTTCACCAAGCTTAAAGGTCTGTTTACACTTTCCTTCTCACAATGC
AAAGgtcttttttcactttcgtGCTGAAAGATTTTTCCCTGAGAAGTCAT
TTTTTTCGACTATATCCACatttattggaactaattttcgcgggttctaa
ttttagcgtttttcgcggttttttgtcaaaatcgcgaaaattaattcccg
cgaaatacaattttttccaattttatcgaaaaatttgaaaaacccctagg
aaaatgaaaagaattgtCCATAAAAAGGCataaccgcgaaaattaaaacc
cgcgaaaattccagtatggaaaaaaccgcgaaaattaaaacccgcgaaat
gcattttttcggatattttttttcgaccgcgaaaattagttcccgcgaaa
attagttccaataaggtatgaAAACGTCAAAAAGCTTCGATCAAAGCAAT
CCCGTTTTTTCTTATCCCGGTGGTATATGAAAAAGTTTCCCCAATaatca
tattttcatattttgattcaAGAAAACCCGAACGGCATATTAAGAAACAT
CTGCCTTATTTGTTCAATACCTATTacacccactgacctttatatatata
tccctggaccaatctatatccgccatctttgattggaagAAGCCATCGCA
ATATTAagaattaacgtctaacggcgccacagcatcaaaaatatttgagg
gaaagtagacctagtgctctcgatgcatttacaccgctatttagtagtgc
cgccattagggtaccacttttcaaaaaactccgatcaaagattttgcttg
actGGGAATGAGAAACTTGGACcaggttatataaaggtcagtgattacAC
CCCGATAAATGAGAATTATAATCCCTATAATCCGATTTACCGTTGTCATT
GCCAGGTAAACCTGAACGTCAAAACAAACATCGGTCAAGTCAATCCGATT
CGGATTACGATTACAACCCGATTAGTGAGGacgaaggagaagaagaagat
gaagacaATTATTATGAAGACGCCGATTTCGGTTTGATAActctcttttg
aattttttagttttgatatTGTAGTGgcctcttccagaaaaaaattgatt
attgGGAATGGAGGAGATAATAATTTCTTGGAGATTTGCCAACCGAACAT
TTTGGTTTTTGACCCCcaggacagcaggtctaaccccccccccaacaAAT
ATTATGAAGACGCCGATTTCGGTTTGATATTTCTTTTGGATGTTTCCTTT
TTTTGTCTCAAAACTGTAATGTGATATCTTTCTCAAGGCTTTTTCAGATT
GGTGTAGAAGTTGGgtttactttttttaataattgtGACTGTTCCTGTTT
TTTAGATCGTTTTCTCACAATATTGATGTTTATTATTCCAAAACGAAATC
GGATTTTTCAACTGGttataaatttgaattttttcggCATACCCGTTCCT
CGcgtattttgtctttttgatgCTTAAATAGATAGAATAgaatcgatatt
ttacgtggatagcccagtaatttaggacttttaggcagtcattgttttca
cggggtccacggccagctggcttggctatctatgaactgaacagaaTATT
GGAAGGAGCAGGGATTCGAACCGCGGAGCCCTGGTTTAAGACgatgacgc
ctttgaccacttggccatcgcttaCAATACAATAGTTTTCTGAAGTCCAT
AAGTGACGTAAATAAGACtagggatacacggggacgagctTCTTTTCATA
TCTTTACTGATatataatttctttcttttacttCAGTGTATCCACGAGTT
GACGTTGATAGCGAATTATACGGGGACGATTTCTCTTGGAACCCAAATAA
CCGAAAACCACCCAAAAGGAAACGCAGTATGTCTGATAACGAACTCATTG
GTACCCTTATGGACTGTCGGGGACACATAtgtcttatataaaacactaga
tagagctactctgtcactttttgaatcaaaataatccgccatctttgata
agGAGAAAGtagttcggtgccggcaatttgatcgATCAAGCCTATCTGTC
GCCTCGTCGCTTGGCGCCATTCAGGTTTCTTTGCCTGGTTGAATTTTCCG
GTACCAAACTGTGACCTACTTTCTGCAAAGATGGCGCATTGTTTTGCTTC
ACCTGTCGTTGCTTGGGAAAtgcagagtagctctatctagtgttttatat
atgaTATCTGTGGTCGGGGACAGTAAAATAAAATGGGAAGGTTGGAAATC
TCTCAAAAATGTTGGTTTAGTCCTGgtcgaaaaaattttgaaaaaataaa
ttgtcaGGGACGCATATGGCATTATTACACGTTATTTTTTTTAAGCATAG
AATTCATTTGACCTGAGGCCGGGCATAACCAATTTCTATTGTTCTGTAAT
AATGGATGTATTGTTATCGAGCCCAAATCTCAGCATACTTATAAACGTTA
TTcttctaaattaaaaaaaaaaccgtaTTTGTACCACTAGTTAGACGAGA
CTTGTGTACCTGCTAGCACACAACATTCCTTCAACATTCATTtagcgtta
tatggacgttgtaaacattaaacgaacgttgaaacaacgttgtgtgcccg
CTGGGTACCAGCTGGGTACCTGCCTCTTAATGAGAAGGTTGCGACTCTCA
GTAatttattaccgagtttatgtatcggatgATATCGAGGGTGGAGGTAA
GTGAAGTCGACGTAAAACAAAGTCGAATATaaatatcgcctttgctcacc
ttaATAGActgtattttggtgtttttgccgTCGTCGAGCAAAATGGGCGG
CGATTTTGGTGAAATGtaaactttgctttataccatCTCCTTCGACGAAT
ACATCgccgttgacaaatcaaaagggCCAATCACAAAGTTACTGTCGGAG
AAAGCCAAGAGTTTTTCTGTCTAGCTAGCCTTAAATTTGAGATTGGCCCA
TTTTGTATGGTGAGGAGGGTCCCATCTACATGAAACagggtcaatctcaa
aatttatgctcagataaacagaaaaattcttagTTTTCTCAGGCAATAAT
TTTGAGTTTGGACCTTTTTATTTGTCAACGGCGACATAAGCTCGCTATTG
AATCATGTAAACATTTTATTTCTTTAGTCCGCAAACCGTGGACTTGATTT
GTCAACGGCGACATAAGCTCGCTATTgaatcatgaaaatattttaatatt
tctttAGCCCGCAAACCGTCAGGAGTGACACCTTCAGCTTCATCAACATC
AGCAACAACGATGACAACGATAAAGAAACTAAAAGAAGATGACTTCGACC
CTTTCTTTGCACCTGATGAAGATGTTAAAGTAAATTTCCAAACTCTTAAA
ATAAGTGTCTCACTTTCTGTccagaaatatttttcaagactttttctTCT
ATTCTGTGACTACTTAAAAAAATTCtagtgaaaaggaaaaaaataaagtt
tttttttgattttgctgcCTTGTATTGTCAATTCTGGTCTCAATTTTAAG
CTCTCTATGTTCATGCATGGAAATCACAgatatcatattcttttacaaac
tagataggctaactgtttaaagattttccgtgaaagtgtgtccagttttg
aAGTCGACTAGTCCGCCATGATGCATTCTATTTTACCTTGGagtttcgaa
cgttcgaatttcaaaacatttgaattgCGCTGTTGtttacaaaatttgaa
aacaagattGCGGACTAGTGAGCTCTAAAACTGGACACGCTTTCTTTTAT
ATGAGAAATCCGATCCAGTCAAATAGTTAGAGAGCAGTGCTGGGACCAGT
GATAGCCATTGTATAGTTTGATAACGAAAATCATATTTTTACATGTTGAA
GTTTACAAATGAATCCAAACTAAAAGCACTTTTTTATTATATTCTTTCTT
CAAAGAAACCGGCTCAAAGAAATAGAAGCACTTCTTCGACCAGCGGTAAG
TGTATGCTATTTTATATCTTAAGCAGATTATATCATTTCATATACCTAGT
TTTTTTACAATTCTTCTGAGTATTATAAAAATGCCGTAAAATAAGTTTCC
TTCAGATTGACCTAAACACTGAAACCCAACCAACAGTCATCCCATCCTTT
GAACGTTCCTCTCCCCACTCCTTTGatcattaccgagtttatgtatcgga
ggatatcgagggcgacggtaagtgaaatcgatacaaaacaaagtcgatag
ttcatgtacggctctatatcgcctttgctcacctaaacagacgacgatat
cttggtgtttttaccgtcatcgagcaaagtggacggtgatttcggTCCTG
tgtcagctttgctttataccgtccccctcgatttatctcgaatacataaa
ctcgctatttacAGGCCCAGCGGAGAGGGTGACTAGGGTTGCAGAATAAT
GGGTATGTGCAGACCGGACTAGACCTTAGAGAGACTCAATTAGTGCGAAA
AGTTACCCGGAGCTCCAGTATATAAGTTCATCATTTTATAACAAACGTCG
AGTCATTCGAGTAACCTTCGCATGGGGTGAGGGAAAAGACCTTAGAACTA
ATATAACTCTCCATCATAACTGGAACACGCACGGAGACTTttctcgagtt
atggagtaaggtttataagacatttttaactgaagggactaGGAAACTTG
ACATtcaagacattcgagttatagatgttcgagttaaagagactgtaCTT
TACCCTCTTGCTCCaaactttttttactttaagGTTTACCCATTGAGCGG
CTCTCTTACTTTTCGTGAGTTTTTTAGTGTAAAGTTTACCAAGAGACTAA
ACACTGTATCACCACATCCTTCTGATAGCTCTAACGCATTTTTCCTCAAT
CTCTTTTAGATGGGAGACAGAAAAGCGTCAAATCAAACCTTGTTGGAGGA
CTGGGGCCGAGTTCAAAAGCACCAATAAAAAAGAAGCCTAAAACCTCAAC
CACGAAGCAACNCTTGTTGGAGGACTAGGGCCGAGTTCAAAAGCACCAAT
AAAAAAGAAGCCTAAAACCTCAACCACGAAGCAACGGTTAGGGAAATTGT
TGAAATTGGACAAAACTGGTACCCGGTATGTAAGATGATGGTAATGAACA
TTTGTGAAACGTTCGTCTTTCTATTTAGATCGTTTTCGTCATGTGCAata
cccactgacctttatatatccctggaccaagctataccCGCcttctttga
tcgaagtttttttgaattggtacccgtaaagaagccattaagaattaacg
tctaacggcgctatattatcaaaagttttcgagggaaagtagatctatat
atcaaagattttgcttgactgggaatgagaaacttggtccagggtatata
aaagTCAGTGGTAATACCCAAACGTAAAGTTGTAATTGAACTTTTCAGCG
AAATACCTAGACTATGCTCTAGTCGTGTCAAGAGTCGAAAGCTTCCATCG
TTTAATTGAGTTTAATTGATTTTTGGACGTTTTCAATACTTTTCACATCA
TAAGCATGCTAACTCATCTTATTACTAAGAATATCAACACTGAGAAATAT
TCTTAGAAATAACATGACGAGTTATTCACAGATTTATTCTTTGGGAGTGA
TGTTATTCCAAATTCGGAATGACGTAACAACGCATAAATCACAAAATATA
ACTCGCGAATTATGGATCTTGATTTGACCTGCCAACTCGTTTTCAATaaa
ccttatcggagtttttgtttttctaaaacagcgatgcattgttggattgt
ttcgggggtataacaatagaattccctccaggaattcctaagagatttct
attgtaatacccccgaagcaatcccacaatgcatggCGTTTTTAGAAAAA
TCNggaattcctaagagatttctattgtaatacccccgaagcaatcccac
aatgcatggcgtttttagaataattaaaaactccgataagatctatgtCT
AGTTTGTccctttgttttctttttaaacttttacctTTCAAGATatcgtt
gttttttataagaacattttaagaaattaATAATTTATTGTATGTAATTA
AGTGACGTAGTTTAATGATGTATGTTATTATATTCAGTAATGTTTTTAAT
ACCCAGTCTCTGTCGATGACCCGCCCTTCCGATTGTTTTGTTGTTAGGGC
GCCACCGCCACCGCCACTGCCCAACGTTCTTCtaagttttaagttttaat
gCTGGTTTCcttcaatgggcttttccagaaaaaaaccgtacaccccctgt
tgaggagctccaaccttttgtgacctacccccttggaattccaggcaatt
ttaggatcatacccctctggaattccgaatttttacaaattttcaatcac
tATCCGCTTTGGAATTTCCCCTtctttttgacggattttcgcctaccctt
atggaattccactgcatttcaaaccttacccccttggaacggaaatggac
ctcctcaacggGGAGGGTCCAATAACTTTCACATTATGTAGTTCTTTGGT
ATGGTTTTTTCTATCACCGCTTCCTCAGAGCATCAAAATATAAAACTGCT
CATTTTTATACGTGGCAACTTGAAAGTTTTATGATTTAACCTTTATGTTG
AATCTACTTCTGTATATAagatataaacttttaattcCACTTGATCTATC
TATACCTTGACTTGTTTTTCGTTTGAAATAATTGTGTAGTgtttgtttta
gtttttatcTGTTATTCGGAGACTcaattgactctctctaattcgatctt
cacgggtccaaaaattttattttgtaaagAGTAATTTATTTAAGCCACTT
TCTAAGCCCCTttggaccaatattttagttcgaatta

Coding sequence (CDS) from alignment at scaffold_451:510556..519842+

>TCONS_00066155 ID=TCONS_00066155|Name=TCONS_00066155|organism=Clytia hemisphaerica|type=CDS|length=7056bp|location=Sequence derived from alignment at scaffold_451:510556..519842+ (Clytia hemisphaerica)
TCTACGGAAGATTTAACACTTGAAGATCGTCTACCTATCCCTGTGGCTCG
TCTACACAAAAAGAATCCACTCGATTTAAAGAAGGAGATCGAAGCTGCaa
agaaagatattttctcatcCGCCCTTTCCAACAACACGACGCCCGGTGGC
GGTGGCGGTGGCGGAAACTCTCTTTATTTCACGCCCAAAGAAGAAGAAGG
GAACGATATCACTGTACGCCCTGTTTCTTTCAACCCGGACCAACAAGATC
GAGTTAATCCGAGTAACAACTTTGGGAATGGGGATAGCGAAGAACTTTTT
GAACATTCAACGGAACTTGAGGAAGAAGAGGAAGAGGTCGAAGATAACGA
TGGTTACGTCATTGATTTCCTTCCCAAGCCTAAAGGTAAACCTGAACGTC
AAAACAAACATCGGTCAAGTCAATCCGATTCGGATTACGATTACAACCCG
ATTAGTGAGGacgaaggagaagaagaagatgaagacaATTATTATGAAGA
CGCCGATTTCGTGTATCCACGAGTTGACGTTGATAGCGAATTATACGGGG
ACGATTTCTCTTGGAACCCAAATAACCGAAAACCACCCAAAAGGAAACGC
ACCCGCAAACCGTCAGGAGTGACACCTTCAGCTTCATCAACATCAGCAAC
AACGATGACAACGATAAAGAAACTAAAAGAAGATGACTTCGACCCTTTCT
TTGCACCTGATGAAGATGTTAAAAAACCGGCTCAAAGAAATAGAAGCACT
TCTTCGACCAGCGATGGGAGACAGAAAAGCGTCAAATCAAACCTTGTTGG
AGGACTGGGGCCGAGTTCAAAAGCACCAATAAAAAAGAAGCCTAAAACCT
CAACCACGAAGCAACNCTTGTTGGAGGACTAGTCTACGGAAGATTTAACA
CTTGAAGATCGTCTACCTATCCCTGTGGCTCGTCTACACAAAAAGAATCC
ACTCGATTTAAAGAAGGAGATCGAAGCTGCaaagaaagatattttctcat
cCGCCCTTTCCAACAACACGACGCCCGGTGGCGGTGGCGGTGGCGGAAAC
TCTCTTTATTTCACGCCCAAAGAAGAAGAAGGGAACGATATCACTGTACG
CCCTGTTTCTTTCAACCCGGACCAACAAGATCGAGTTAATCCGAGTAACA
ACTTTGGGAATGGGGATAGCGAAGAACTTTTTGAACATTCAACGGAACTT
GAGGAAGAAGAGGAAGAGGTCGAAGATAACGATGGTTACGTCATTGATTT
CCTTCCCAAGCCTAAAGGTAAACCTGAACGTCAAAACAAACATCGGTCAA
GTCAATCCGATTCGGATTACGATTACAACCCGATTAGTGAGGacgaagga
gaagaagaagatgaagacaATTATTATGAAGACGCCGATTTCGTGTATCC
ACGAGTTGACGTTGATAGCGAATTATACGGGGACGATTTCTCTTGGAACC
CAAATAACCGAAAACCACCCAAAAGGAAACGCACCCGCAAACCGTCAGGA
GTGACACCTTCAGCTTCATCAACATCAGCAACAACGATGACAACGATAAA
GAAACTAAAAGAAGATGACTTCGACCCTTTCTTTGCACCTGATGAAGATG
TTAAAAAACCGGCTCAAAGAAATAGAAGCACTTCTTCGACCAGCGATGGG
AGACAGAAAAGCGTCAAATCAAACCTTGTTGGAGGACTGGGGCCGAGTTC
AAAAGCACCAATAAAAAAGAAGCCTAAAACCTCAACCACGAAGCAACNCT
TGTTGGAGGACTAGTCTACGGAAGATTTAACACTTGAAGATCGTCTACCT
ATCCCTGTGGCTCGTCTACACAAAAAGAATCCACTCGATTTAAAGAAGGA
GATCGAAGCTGCaaagaaagatattttctcatcCGCCCTTTCCAACAACA
CGACGCCCGGTGGCGGTGGCGGTGGCGGAAACTCTCTTTATTTCACGCCC
AAAGAAGAAGAAGGGAACGATATCACTGTACGCCCTGTTTCTTTCAACCC
GGACCAACAAGATCGAGTTAATCCGAGTAACAACTTTGGGAATGGGGATA
GCGAAGAACTTTTTGAACATTCAACGGAACTTGAGGAAGAAGAGGAAGAG
GTCGAAGATAACGATGGTTACGTCATTGATTTCCTTCCCAAGCCTAAAGG
TAAACCTGAACGTCAAAACAAACATCGGTCAAGTCAATCCGATTCGGATT
ACGATTACAACCCGATTAGTGAGGacgaaggagaagaagaagatgaagac
aATTATTATGAAGACGCCGATTTCGTGTATCCACGAGTTGACGTTGATAG
CGAATTATACGGGGACGATTTCTCTTGGAACCCAAATAACCGAAAACCAC
CCAAAAGGAAACGCACCCGCAAACCGTCAGGAGTGACACCTTCAGCTTCA
TCAACATCAGCAACAACGATGACAACGATAAAGAAACTAAAAGAAGATGA
CTTCGACCCTTTCTTTGCACCTGATGAAGATGTTAAAAAACCGGCTCAAA
GAAATAGAAGCACTTCTTCGACCAGCGATGGGAGACAGAAAAGCGTCAAA
TCAAACCTTGTTGGAGGACTGGGGCCGAGTTCAAAAGCACCAATAAAAAA
GAAGCCTAAAACCTCAACCACGAAGCAACNCTTGTTGGAGGACTAGTCTA
CGGAAGATTTAACACTTGAAGATCGTCTACCTATCCCTGTGGCTCGTCTA
CACAAAAAGAATCCACTCGATTTAAAGAAGGAGATCGAAGCTGCaaagaa
agatattttctcatcCGCCCTTTCCAACAACACGACGCCCGGTGGCGGTG
GCGGTGGCGGAAACTCTCTTTATTTCACGCCCAAAGAAGAAGAAGGGAAC
GATATCACTGTACGCCCTGTTTCTTTCAACCCGGACCAACAAGATCGAGT
TAATCCGAGTAACAACTTTGGGAATGGGGATAGCGAAGAACTTTTTGAAC
ATTCAACGGAACTTGAGGAAGAAGAGGAAGAGGTCGAAGATAACGATGGT
TACGTCATTGATTTCCTTCCCAAGCCTAAAGGTAAACCTGAACGTCAAAA
CAAACATCGGTCAAGTCAATCCGATTCGGATTACGATTACAACCCGATTA
GTGAGGacgaaggagaagaagaagatgaagacaATTATTATGAAGACGCC
GATTTCGTGTATCCACGAGTTGACGTTGATAGCGAATTATACGGGGACGA
TTTCTCTTGGAACCCAAATAACCGAAAACCACCCAAAAGGAAACGCACCC
GCAAACCGTCAGGAGTGACACCTTCAGCTTCATCAACATCAGCAACAACG
ATGACAACGATAAAGAAACTAAAAGAAGATGACTTCGACCCTTTCTTTGC
ACCTGATGAAGATGTTAAAAAACCGGCTCAAAGAAATAGAAGCACTTCTT
CGACCAGCGATGGGAGACAGAAAAGCGTCAAATCAAACCTTGTTGGAGGA
CTGGGGCCGAGTTCAAAAGCACCAATAAAAAAGAAGCCTAAAACCTCAAC
CACGAAGCAACNCTTGTTGGAGGACTAGTCTACGGAAGATTTAACACTTG
AAGATCGTCTACCTATCCCTGTGGCTCGTCTACACAAAAAGAATCCACTC
GATTTAAAGAAGGAGATCGAAGCTGCaaagaaagatattttctcatcCGC
CCTTTCCAACAACACGACGCCCGGTGGCGGTGGCGGTGGCGGAAACTCTC
TTTATTTCACGCCCAAAGAAGAAGAAGGGAACGATATCACTGTACGCCCT
GTTTCTTTCAACCCGGACCAACAAGATCGAGTTAATCCGAGTAACAACTT
TGGGAATGGGGATAGCGAAGAACTTTTTGAACATTCAACGGAACTTGAGG
AAGAAGAGGAAGAGGTCGAAGATAACGATGGTTACGTCATTGATTTCCTT
CCCAAGCCTAAAGGTAAACCTGAACGTCAAAACAAACATCGGTCAAGTCA
ATCCGATTCGGATTACGATTACAACCCGATTAGTGAGGacgaaggagaag
aagaagatgaagacaATTATTATGAAGACGCCGATTTCGTGTATCCACGA
GTTGACGTTGATAGCGAATTATACGGGGACGATTTCTCTTGGAACCCAAA
TAACCGAAAACCACCCAAAAGGAAACGCACCCGCAAACCGTCAGGAGTGA
CACCTTCAGCTTCATCAACATCAGCAACAACGATGACAACGATAAAGAAA
CTAAAAGAAGATGACTTCGACCCTTTCTTTGCACCTGATGAAGATGTTAA
AAAACCGGCTCAAAGAAATAGAAGCACTTCTTCGACCAGCGATGGGAGAC
AGAAAAGCGTCAAATCAAACCTTGTTGGAGGACTGGGGCCGAGTTCAAAA
GCACCAATAAAAAAGAAGCCTAAAACCTCAACCACGAAGCAACNCTTGTT
GGAGGACTAGTCTACGGAAGATTTAACACTTGAAGATCGTCTACCTATCC
CTGTGGCTCGTCTACACAAAAAGAATCCACTCGATTTAAAGAAGGAGATC
GAAGCTGCaaagaaagatattttctcatcCGCCCTTTCCAACAACACGAC
GCCCGGTGGCGGTGGCGGTGGCGGAAACTCTCTTTATTTCACGCCCAAAG
AAGAAGAAGGGAACGATATCACTGTACGCCCTGTTTCTTTCAACCCGGAC
CAACAAGATCGAGTTAATCCGAGTAACAACTTTGGGAATGGGGATAGCGA
AGAACTTTTTGAACATTCAACGGAACTTGAGGAAGAAGAGGAAGAGGTCG
AAGATAACGATGGTTACGTCATTGATTTCCTTCCCAAGCCTAAAGGTAAA
CCTGAACGTCAAAACAAACATCGGTCAAGTCAATCCGATTCGGATTACGA
TTACAACCCGATTAGTGAGGacgaaggagaagaagaagatgaagacaATT
ATTATGAAGACGCCGATTTCGTGTATCCACGAGTTGACGTTGATAGCGAA
TTATACGGGGACGATTTCTCTTGGAACCCAAATAACCGAAAACCACCCAA
AAGGAAACGCACCCGCAAACCGTCAGGAGTGACACCTTCAGCTTCATCAA
CATCAGCAACAACGATGACAACGATAAAGAAACTAAAAGAAGATGACTTC
GACCCTTTCTTTGCACCTGATGAAGATGTTAAAAAACCGGCTCAAAGAAA
TAGAAGCACTTCTTCGACCAGCGATGGGAGACAGAAAAGCGTCAAATCAA
ACCTTGTTGGAGGACTGGGGCCGAGTTCAAAAGCACCAATAAAAAAGAAG
CCTAAAACCTCAACCACGAAGCAACNCTTGTTGGAGGACTAGTCTACGGA
AGATTTAACACTTGAAGATCGTCTACCTATCCCTGTGGCTCGTCTACACA
AAAAGAATCCACTCGATTTAAAGAAGGAGATCGAAGCTGCaaagaaagat
attttctcatcCGCCCTTTCCAACAACACGACGCCCGGTGGCGGTGGCGG
TGGCGGAAACTCTCTTTATTTCACGCCCAAAGAAGAAGAAGGGAACGATA
TCACTGTACGCCCTGTTTCTTTCAACCCGGACCAACAAGATCGAGTTAAT
CCGAGTAACAACTTTGGGAATGGGGATAGCGAAGAACTTTTTGAACATTC
AACGGAACTTGAGGAAGAAGAGGAAGAGGTCGAAGATAACGATGGTTACG
TCATTGATTTCCTTCCCAAGCCTAAAGGTAAACCTGAACGTCAAAACAAA
CATCGGTCAAGTCAATCCGATTCGGATTACGATTACAACCCGATTAGTGA
GGacgaaggagaagaagaagatgaagacaATTATTATGAAGACGCCGATT
TCGTGTATCCACGAGTTGACGTTGATAGCGAATTATACGGGGACGATTTC
TCTTGGAACCCAAATAACCGAAAACCACCCAAAAGGAAACGCACCCGCAA
ACCGTCAGGAGTGACACCTTCAGCTTCATCAACATCAGCAACAACGATGA
CAACGATAAAGAAACTAAAAGAAGATGACTTCGACCCTTTCTTTGCACCT
GATGAAGATGTTAAAAAACCGGCTCAAAGAAATAGAAGCACTTCTTCGAC
CAGCGATGGGAGACAGAAAAGCGTCAAATCAAACCTTGTTGGAGGACTGG
GGCCGAGTTCAAAAGCACCAATAAAAAAGAAGCCTAAAACCTCAACCACG
AAGCAACNCTTGTTGGAGGACTAGTCTACGGAAGATTTAACACTTGAAGA
TCGTCTACCTATCCCTGTGGCTCGTCTACACAAAAAGAATCCACTCGATT
TAAAGAAGGAGATCGAAGCTGCaaagaaagatattttctcatcCGCCCTT
TCCAACAACACGACGCCCGGTGGCGGTGGCGGTGGCGGAAACTCTCTTTA
TTTCACGCCCAAAGAAGAAGAAGGGAACGATATCACTGTACGCCCTGTTT
CTTTCAACCCGGACCAACAAGATCGAGTTAATCCGAGTAACAACTTTGGG
AATGGGGATAGCGAAGAACTTTTTGAACATTCAACGGAACTTGAGGAAGA
AGAGGAAGAGGTCGAAGATAACGATGGTTACGTCATTGATTTCCTTCCCA
AGCCTAAAGGTAAACCTGAACGTCAAAACAAACATCGGTCAAGTCAATCC
GATTCGGATTACGATTACAACCCGATTAGTGAGGacgaaggagaagaaga
agatgaagacaATTATTATGAAGACGCCGATTTCGTGTATCCACGAGTTG
ACGTTGATAGCGAATTATACGGGGACGATTTCTCTTGGAACCCAAATAAC
CGAAAACCACCCAAAAGGAAACGCACCCGCAAACCGTCAGGAGTGACACC
TTCAGCTTCATCAACATCAGCAACAACGATGACAACGATAAAGAAACTAA
AAGAAGATGACTTCGACCCTTTCTTTGCACCTGATGAAGATGTTAAAAAA
CCGGCTCAAAGAAATAGAAGCACTTCTTCGACCAGCGATGGGAGACAGAA
AAGCGTCAAATCAAACCTTGTTGGAGGACTGGGGCCGAGTTCAAAAGCAC
CAATAAAAAAGAAGCCTAAAACCTCAACCACGAAGCAACNCTTGTTGGAG
GACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041410XLOC_041410Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066155-exon-scaffold_451-1491911889:510556..510637TCONS_00066155-exon-scaffold_451-1491911889:510556..510637Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1510915933:510556..510637TCONS_00066155-exon-scaffold_451-1510915933:510556..510637Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1575043694:510556..510637TCONS_00066155-exon-scaffold_451-1575043694:510556..510637Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1491911889:512183..512375TCONS_00066155-exon-scaffold_451-1491911889:512183..512375Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1510915933:512183..512375TCONS_00066155-exon-scaffold_451-1510915933:512183..512375Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1575043694:512183..512375TCONS_00066155-exon-scaffold_451-1575043694:512183..512375Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1491911889:512705..512816TCONS_00066155-exon-scaffold_451-1491911889:512705..512816Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1510915933:512705..512816TCONS_00066155-exon-scaffold_451-1510915933:512705..512816Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1575043694:512705..512816TCONS_00066155-exon-scaffold_451-1575043694:512705..512816Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1491911889:513911..514036TCONS_00066155-exon-scaffold_451-1491911889:513911..514036Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1510915933:513911..514036TCONS_00066155-exon-scaffold_451-1510915933:513911..514036Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1575043694:513911..514036TCONS_00066155-exon-scaffold_451-1575043694:513911..514036Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1491911889:514792..514881TCONS_00066155-exon-scaffold_451-1491911889:514792..514881Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1510915933:514792..514881TCONS_00066155-exon-scaffold_451-1510915933:514792..514881Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1575043694:514792..514881TCONS_00066155-exon-scaffold_451-1575043694:514792..514881Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1491911889:516213..516334TCONS_00066155-exon-scaffold_451-1491911889:516213..516334Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1510915933:516213..516334TCONS_00066155-exon-scaffold_451-1510915933:516213..516334Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1575043694:516213..516334TCONS_00066155-exon-scaffold_451-1575043694:516213..516334Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1491911889:516911..516950TCONS_00066155-exon-scaffold_451-1491911889:516911..516950Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1510915933:516911..516950TCONS_00066155-exon-scaffold_451-1510915933:516911..516950Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1575043694:516911..516950TCONS_00066155-exon-scaffold_451-1575043694:516911..516950Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1491911889:517865..519842TCONS_00066155-exon-scaffold_451-1491911889:517865..519842Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1510915933:517865..519842TCONS_00066155-exon-scaffold_451-1510915933:517865..519842Clytia hemisphaericaexon
TCONS_00066155-exon-scaffold_451-1575043694:517865..519842TCONS_00066155-exon-scaffold_451-1575043694:517865..519842Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066155-proteinTCONS_00066155-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:510556..519842 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.52619	1.51649	1.51974	0.939477	30.4361	23.4678	16.3263	17.368	7.709	9.57119	7.09865	6.50715	5.77975	6.78185	5.12531	5.833	8.06009	8.68429	5.14138	4.15824	5.18415	5.45672	3.77162	4.6102	8.92663	9.9421	3.94545	3.26183	2.94149	3.20759
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066155 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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