TCONS_00066386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066386
Unique NameTCONS_00066386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length258

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066386 ID=TCONS_00066386|Name=TCONS_00066386|organism=Clytia hemisphaerica|type=transcript|length=258bp
tgtTGTTGAGAAGAAAGGAGCGGGCGGTGAAGCAAAGTAGACATTGAATC
GGCAGGAAAATTGTTAAACATGGCGGATCGAGCAGTATGGTTTTCCCCTG
AGGAACCGTTGCGTGTATCGGGCGGAGGGGCGGAGCGAGACGAATTTTGT
TGACTTCTAGAGTCTTTTAAACGTTGAAGTTTTTCAGTCTGACGTTTAAT
TTCCTCAACTAAAACGTTTTCTTCTTCACGGAGTTGGTTTTCCTTATCAC
GTCTGATT
Run BLAST on NCBI

transcript from alignment at scaffold_454:87412..87669

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066386 ID=TCONS_00066386|Name=TCONS_00066386|organism=Clytia hemisphaerica|type=transcript|length=258bp|location=Sequence derived from alignment at scaffold_454:87412..87669 (Clytia hemisphaerica)
AATCAGACGTGATAAGGAAAACCAACTCCGTGAAGAAGAAAACGTTTTAG
TTGAGGAAATTAAACGTCAGACTGAAAAACTTCAACGTTTAAAAGACTCT
AGAAGTCAACAAAATTCGTCTCGCTCCGCCCCTCCGCCCGATACACGCAA
CGGTTCCTCAGGGGAAAACCATACTGCTCGATCCGCCATGTTTAACAATT
TTCCTGCCGATTCAATGTCTACTTTGCTTCACCGCCCGCTCCTTTCTTCT
CAACAaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041554XLOC_041554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066386-exon-scaffold_454-1491911889:87412..87669TCONS_00066386-exon-scaffold_454-1491911889:87412..87669Clytia hemisphaericaexon
TCONS_00066386-exon-scaffold_454-1510915933:87412..87669TCONS_00066386-exon-scaffold_454-1510915933:87412..87669Clytia hemisphaericaexon
TCONS_00066386-exon-scaffold_454-1575043694:87412..87669TCONS_00066386-exon-scaffold_454-1575043694:87412..87669Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_454supercontigscaffold_454:87412..87669 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.35358	1.97993	1.53259	0.749702	6.38883	2.16366	3.48049	2.44379	4.56255	0.706432	7.54248	3.60591	1.35034	2.80468	1.53722	1.23725	1.01613	2.083	2.15833	0	5.23488	0	0.775995	0	4.35984	1.94553	1.85603	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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