TCONS_00066424 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066424
Unique NameTCONS_00066424
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2420

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066424 ID=TCONS_00066424|Name=TCONS_00066424|organism=Clytia hemisphaerica|type=transcript|length=2420bp
ctttgttaaatttttacTCAGTGAGCGGAAAACATAACGTCATAGCAATC
AGAGGAATTTTGCTAATATTCTTCtatattttaaaaagtttaacataatt
ttgagttttttttgacaaaactcTTTGTAATTATATAGCTTTTGAGTAAT
CTaatcgattttttttaattttacaatttgttttacCATTATAcagattt
tatttcatttatttactgaTCAAAAGCTATATTCTCCTACGCATCGAAGT
TCACCATGTACGGAGCACGGTCCGAATGGTGGTGAATTGAGTGAAAATGA
TTACGCATACCAATGTTTTTCCAAACCTTTACAAACTGCTGAATTAAAAA
GTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGATCTGGCAAAATGGT
GATGGGCTCACCCAACGCTGAAGGCTCTGTACAAACAGTTTCCACACTGG
CGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCTGGTAACTATGAAAGT
GCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACTGG
ATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGACC
AATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTGCA
GAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTTAA
AGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTTCA
TTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATTTA
GAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGAACT
ATATTGTGTACGAAGTGATCTTGGAAATCTACTGAAAGCACTTGGTCGAC
TTGAAGAAGCTAAGGCATGTTATCTCAAAGCCATTGAAACTCAACCAAAC
TTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTAATGCTCAAGGGGA
AATATGGCTTGCCATTCACCATTTTGAGAAAgcTGTTCAAATTGACCAAA
ACTTTCTTGATGCCTACATAAATCTTGGCAATGTGCTCAAAGAAGCCAGA
ATATTTGACAGAGCTGTGACTGCCTACTTGCGTGCACTAACAATAAACCC
AAATCATGCTATTGTCCATGGAAATTTAGCATGTGTTTACTATGAGCAAG
GGCTCATTGATTTGGCAGTTGATACTTACAAAAGAGCTATTGAACTACAA
CCAAACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCTTAAGGAACA
AGGCAAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTCTAACCCTAT
GTCCATCACATGCAGACTCGTTAAATAATCTAGCAAACATCAAAAGGGAA
CAAGGCAAAATTGAAGATTCCATTGGATTGTACATGAAAGCGCTACAGGT
CTTTCCAGAGTTTGCTGCAGCCCACTCTAATTTAGCAAGTATTTTACAAC
AACAAGGAAAACTCCACGAAGCATTGATGCATTACAAAGATGCAATAAGA
ATCCATCCGACTTTTGCTGATGCATACTCAAACATGGGGAATGCCTTGAA
GGAAATGCAGGATATTCAAGGTGCAATCCAGTGCTACACCAGAGCCATTC
AAATAAATCCTGGTTTTGCAGATGCCCATAGTAATCTTGCATCAGTATAC
AAAGACTCAGGAAATATTGCTGAGGCTATTCAATCCTATAGAACTGCTCT
TAAATTGAAACCAGAGTTTCCAGATGCTTATTGTAACCTTGCACATTGCT
TACAAATAATTTGTGATTGGAATGATTATGATAATCGTATGAAAAAACTG
TTAACAATAGTTGATGATCAACTTGGTAAAAATCGATTGCCTTCAGTTCA
TCCGCACCACACCATGTTATATCCTTTGTCCCCACAACAAAGAAAGGCTA
TTGCTAATCGTCATGGAAACCTTTGTCTTGATAAGGTATGTAATGACTGG
TTTTCAATAACTTGAATTACAGTATGATATCTTTAGTCAcataactttgt
attgaaaACCCAGCTTCAGTTAAGGTtaagccaattttcattcattgatt
GAGTCCTCTCCTGAAGCTTCCAATTTGTGAAggaaattttatgaattttt
tggacctccatttctttttttttatctcaCAATTGATCACCTGGGAATCA
ATTTGAAAGAATGGCTGGCAAACTTGCTTTATATAATTCACATAACCTTT
TACATAATGAGCATTTTATTTTAGACAAAAATTAGGGGTTGTTttagaaa
atcatgaaaaaactaaatttgggtAGGAACTTATTTTGATGAGACGGCAA
TATTTTTAAGTCCACTAAAgtgtagactagtaaactagtcggttattact
tataataaaactgtcaatca
Run BLAST on NCBI

transcript from alignment at scaffold_455:338263..347055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066424 ID=TCONS_00066424|Name=TCONS_00066424|organism=Clytia hemisphaerica|type=transcript|length=8793bp|location=Sequence derived from alignment at scaffold_455:338263..347055+ (Clytia hemisphaerica)
ctttgttaaatttttacTCAGTGAGCGGAAAACATAACGTCATAGCAATC
AGAGGAATTTTGCTAATATTCTTCtatattttaaaaagtttaacataatt
ttgagttttttttgacaaaactcTTTGTAATTATATAGCTTTTGAGTAAT
CTaatcgattttttttaattttacaatttgttttacCATTATAcagattt
tatttcatttatttactgaTCAAAAGCTATATTCTCCTACGCATCGAAGT
TCACCATGTACGGAGCACGGTCCGAATGGTGGTGAATTGAGTGAAAATGA
TTACGCATACCAATGTTTTTCCAAACCTTTACAAACTGCTGAATTAAAAA
GTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGATCTGGCAAAATGGT
GATGGGCTCACCCAACGCTGAAGGCTCTGGTAAGTTAGTATTTGAGACTG
GGATTGCGATTGATGGACTGACGTTATTCCCGAGGGAAGAGTGTGCGACT
TGGCACTTCCACTTTCGTTTTGAACAAAAGGAGGGGAAAAAACTTGCGAC
ATGAAAGGGAAGTGGTACGATCACCAGCGGGAATGACTTTTAGATGGTTC
TTATCCTATGCCTACtctaaaaaatttttgtttacactGTTTCAGACCTC
CCTTAGAAtattattgtttcaaaaagGAAATGAGTTGACTCTGGAGCTTA
TTATAAGCTTATTTTTgtgttgtgattttttttgaaatatttgctatAAT
TTGCTTTGCGAAGTCCTGAGCCATTTTTTGGGGGCAAATGGGTACTGTTT
AGTATGTCTCAGCATCAGAGCAGTACAGGGAACCTTTTCAAACCCTGAAA
ATGTCTTTAAGAGTTGTGAAACCAGCCTTCAGCAGCCTGTAGAAGGTTCT
CAAAATCTGATCAAACAAACTTGTCGAATCCAATCAAACAATtgaactaa
tcaaactccatcgaacgattaaagttcaattaaaaaaattaatcaaacct
aatcaaacactcacaatttttgaagcaatagcagttcgattggttcggtc
aggaaaaaaacttcgattagttcgatgatattaaatcctcatatcttccc
ttgcttgcaaaaactttatcctgccacgcgattgccatttcgacagttcc
cggacttaacaaCTTAAagtttattgtacccggatatttgtccgCGGCCC
CTTTGTTGCGATTTTGCACGCAGCCGAGTGGTGGATTCCTACGCCtcaac
aaaccgcctctggcgctaaaaggatacagggaAAGTGCGTAATCCATAAT
CGGtttaatttcccgatttacattctgaatttggctttgaaaagaagcta
atatacggtggtggagcagcacaaacttgtcgaacaattaattggtttat
cgaactgattgaaccgaaacccattgataGAACTTATTAAACACTCAGGA
TCTTTTAAtaaatcttagagttcgattaattatTTTAATCAATCTTTAAT
CGTTTgatgaagttcgattagttcaattgttcgattggttcgacaagttt
gattgatcgggtctggtataTTCcttgaagtcaggtaacttgcatcagtg
gagggaaacatACAtacccctcaaatgaatgacctgtctggtcattaaaa
tacaaagttaaatacaaacaaaaatggtagagtagagctgcgagcggagc
tgcatggttcatttgttttgaaatttttctgctttgtttggtcagtcatt
tgagggctaatagaccttttttcaaagaggacgtcttGTTGAAtgattat
gtagtccagccgtaaaaacaatgatagagccatgcataattactgtatca
tgcatattgtaataattatgcatggttttatcattgtttttctgctggac
tacataattattcaacagggtggcctctttgaaaaaggtctattgaagtt
tccctccactgatgatgcaagttacccaacttcacggtatAGAAATGTAG
GGCTCCctaattttaaaatatattttttgggaGATCGTAAAATACAGTAG
TTGCTTCCTCAAGATttctaagccaatcaaaatatgTGCACAGAAAACTG
TGCTAGCAGTGGCGTTGTGACaagcggagcttttttgaaaggGCGCCAAA
AGAGACTTTTTTAATTGCCCTATCCTTAAATATCATACTTTAGGCGCCTT
AAATCGCGCCCCTGGatcaattttactgagatagttttaaaatacttgca
atttttttttgctcacttcGCTTGCAATACAGCTAATTGGTAACTTCATG
CAATCTTTAGctaaatttacaagtttttttgtgtacaatatagcattaNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNagccaaagaaatttttagaatcataatttccaa
aacttcagaaaataacagaagaatgaagaagagaattacaaacaaaattg
gtgattttatttttgtttgatcTCTTATAAGTAACACAACTTATAATAAC
AAcaacattcgaaaacaatagaatgtcttcatttctctCAAGATTAAAGA
TAGGGGATAATGCGCGAAATTTTTTACCCCccccttcataatttttttac
caagcatagggttaagcatatatagtcgaggctcaaaattgagctttact
taagcatagtgagcttcagccgaaatttaccgtatgcttataaaacgaaA
TGAGTGTATTGAATGAAAAGttaactgcgccccaagaccaatttgctgac
aagGGGGCTTGGAAGCTTTGGCAATTTGCAAGAgtgttttccattcattt
ttggatttctcaacaattattatattttatagTTAGAGATTGTAAGAGTT
TGTGCTTAAAAGGACGAAAAGAGAGGGGGTtgaggaattttcatttttaa
gagggGTTGATCTAAAAAAGGGGGTACGCtatcaaaaaatcagaaagata
aGATCTAGCATACAAATTTTTGTTGCTAGTTTTTTCACTGATTACCTTTT
TCCTCAAATCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTGTTGCT
GAACAATGTCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCCACACT
GGCGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCTGGTAACTATGAAA
GTGCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACT
GGATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGA
CCAATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTG
CAGAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTT
AAAGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTT
CATTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATT
TAGAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGTA
AGTCAAATTTGTACAGATTTCAGCATTCACTGATTGGGGACTTGCTAAAT
CATTTTCAGGCTCTTATGTTTGTATGTCATACACTAATCTGTGTAAGGCT
CATTTTCTATATAGAGCCAATTTAttttatgcttatagaaaagtgaataa
aattttatatacTTTTCAGGAACTATATTGTGTACGAAGTGATCTTGGAA
ATCTACTGAAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTAATGAG
AATTCTTTTATACCTCTTTACTTTATGAACAGTTTTTCGCTTCCCTAAAG
AGAAACATCTGAATCTAATTGCCTCTTTCTTTATTTTCNTAAGAGGGGGT
TGATCTAAAAAAGGGGGTACGCtgtcaaaaaatcagaaagataaGATCTA
GCATACAAATTTTTGTTGCTAGTTTTTCACTGATTACCTTTTTCCTCAAA
TCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTGTTGCGGAACAATG
TCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCCACACTGGCGCTTG
CGGAAGCTGCACATCGAGAATACCAAGCTGGTAACTATGAAAGTGCTGAG
AAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACTGGATGCCT
CTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGACCAATCTG
CACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTGCAGAAGCT
TTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTTAAAGATGC
ACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTTCATTGACG
GCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATTTAGAGGGA
GCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGTAAGTCAAAT
TTGTACAGATTTCAGCATTCACTGATTGGGGACTTGCTAAATCATTTTCA
GGCTCTTATGTTTGTATGTCATACACTAATCTGTGTAAGGCTCATTTTCT
ATATAGAGCCAATTTAttttatgcttatagaaaagtgaataaaattttat
atacTTTTCAGGAACTATATTGTGTACGAAGTGATCTTGGAAATCTACTG
AAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTAATGAGAATTCTTT
ATACCTCTTTACTTTATGAACCGTTTTTCGCTTCCCTAAAGAGAAACATC
TGAATCTAATTGcctctttctttattttctatGGTTCCAAACAGGGTATC
AACTGTGAATCAACTACATGGAATCCTCAATGATGCTGTTTATCCTGACC
AGTCACACATATTTTATCTTAGCACTAGAGGATTGTGAAAGCTATTACTA
GAAAAACTCTTTCTCACTAGACCTAGAACATCTAATGACTAAATCTTAAG
TTAATAGCCTTTTCAATCTTCTGATAATAACTTGTGATTGTTACATTGGC
CATGATTATTTTTCTTCAATGAAGGCATGTTATCTCAAAGCCATTGAAAC
TCAACCAAACTTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTAATG
CTCAAGGGGAAATATGGCTTGCCATTCACCATTTTGAGAAAGTAAGTTTT
GTCTATCAGAGGGAGTTGGTACTCAAATCTCAGACATAGTGGTGTTGCAA
AAGGTGGAATGCAAAATACaaagatttgagattttttttttgaaaaaact
tttgtaCTCATTGACTATTTGACAAATTCAATTTGTGCCAAAAAGGGTTT
TTGCATTGCATCGGtgtcaaaatgttttgaaagaatTGGTATAATTCATG
TGTACTAAAATGCCACTTTCTAAatctttgggggggggggtggtatgtaa
aatattctcaaaatcCCCTTTCAGCAACACTTATCTAGGTCTGACTCTTC
CTGTCTATAAATTAATCGTATTCCCTGTCTTTTTCTATCATTGAAGCTTT
TGACATTAACAGATTCTGTGAATTAAAGCTCCCATTTCTCTTGTTTGCCA
ATTCATATTGCATTAGGAAGTGAcatacattttatttttataagcaagtg
tatgccccttggtcaggctcaaGTATgattaagttctcaaagcatccagg
catagtttatgcttattatatgctgatgaatcatgcttatgattcacctt
gagccaagtttttagtgaaattacAGAAATGtcgtaaaaatttgttcata
tTTTGGGAGCAGtcgaatgtagctagccgtggaatttcttttttttttac
ttgacctctctaccaaacctttttaaacagataagaAATggcaacttgaa
aaatatttcaggctgacacaTATGCTTATGCTATGCTTAGGAATTcagca
aatctgagccttcatatgcttataagcgttctgcttataaaaaaaaaaca
tgtagtgtcCTGTCCtcatgattgaaaaattcaGTCTGCTTTTCTAAGca
tctttgtttacattaacccattttcgttctattttgtctagtattccttt
tgcaacaaaattttacgtttgtgtcaggttgacatttgagaaatttttat
gGGTATATTGGaggaactgatattttcagaattttttggggggaaatCAA
AAAAGGGGGCAAACAAAAAAACTGTCATAGGAGAAaaaagaatttggtgg
ggggaacaaaccctggagtgAGTGGGTAAAACCCATGTTGTTCACAAAGA
ACCTCATTAAGGCTGACTTTATCAAGATCTGTATCAGATAACTAATTTTA
CCCCATTTTCAGTTCACATTtacttttctttgaaataacTTCAGCCACTT
TTGAAACGCCTCaagaaaacagaaaatgaaaagttttgaaaattattttt
caggcTGTTCAAATTGACCAAAACTTTCTTGATGCCTACATAAATCTTGG
CAATGTGCTCAAAGAAGCCAGAATATTTGACAGAGCTGTGACTGCCTACT
TGCGTGCACTAACAATAAACCCAAATCATGCTATTGTCCATGGAAATTTA
GCATGTGTTTACTATGAGCAAGGGTAAGAAAtcttttccaatattttttc
atttcttaatCCACACATTGCTTGGATTAGTTTCCCTGTAATAATGTGAC
ACCTACTTCCAGGTTGGCCACCCTTTGCTTTGTCCAAAGTAATTTTATTG
CAGCTGTTCATAGCTCTTTATGATTTGAAGGATGGATCAACTATAAAGTG
AATTGTTTTAGTTCTGTTTATTATGACAGCATACCTATCACATGCAGCTA
CATTTAATCTTTGAGCATCAACACTGTCACTTTGAAGACTTATTGCTGAC
AGAAATCTCACAAATTTAGTGAGCAAAATTGTCTTATTCATTTTCAGGCT
CATTGATTTGGCAGTTGATACTTACAAAAGAGCTATTGAACTACAACCAA
ACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCTTAAGGAACAAGGC
AAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTCTAACCCTATGTCC
ATCACATGCAGACTCGTTAAATAATCTAGCAAACATCAAAAGGGAACAAG
GCAAAATTGAAGATTCCATTGGATTGTACATGAAAGCGCTACAGGTGAGC
CTAATAAACTATGTAATaagattgaaaattgatttcagatttttttacat
attaGACAGAAAGGGTAATTGAGTTGAGGGTGTGGTTAACAATACCCAAT
TTATATTTGTCACAGGTCTTTCCAGAGTTTGCTGCAGCCCACTCTAATTT
AGCAAGTATTTTACAACAACAAGGAAAACTCCACGAAGCATTGATGCATT
ACAAAGATGCAATAAGGTATTTAAAATGATTGTGTAATGCACCTTATTCA
TTTTCCATAAATACTGTCCTCTTGCAGGTATTACCCGATTTTGCAGTGGG
ATACTCCAATTTAGCTTGTGTCTTACAAGAGCAAGGACGCCTCAAGGAAG
CTTTACTGTATTATCAAGAGGCAGTGAGGTATTGTAATGGCATTTTTTAA
TAAGCTGAAAGTTTTTCTCTTACATGTCCAATATAACCTTTTATTACAAG
TTTATTTTTTGTAAGATTTAATTTGCTTGTTTTGTTTCTACTAAAATGAC
ACCTTTTAAAATGCTAATGTAATGTGTTTCTTCTCATTTGAAATAAACTT
TTTTTCAACAATTTTATTTCAGAATCCATCCGACTTTTGCTGATGCATAC
TCAAACATGGGGAATGCCTTGAAGGAAATGCAGGATATTCAAGGTGCAAT
CCAGTGCTACACCAGAGCCATTCAAATAAATCCTGGTTTTGCAGATGCCC
ATAGTAATCTTGCATCAGTATACAAAGACTCAGGAAATATTGCTGAGGCT
ATTCAATCCTATAGAACTGCTCTTAAATTGAAACCAGAGTTTCCAGATGC
TTATTGTAACCTTGCACATTGCTTACAAATAATTTGTGATTGGAATGATT
ATGATAATCGTATGAAAAAACTGTTAACAATAGTTGATGATCAACTTGGT
AAAAATCGATTGCCTTCAGTTCATCCGCACCACACCATGTTATATCCTTT
GTCCCCACAACAAAGAAAGGCTATTGCTAATCGTCATGGAAACCTTTGTC
TTGATAAGGTATGTAATGACTGGTTTTCAATAACTTGAATTACAGTATGA
TATCTTTAGTCAcataactttgtattgaaaACCCAGCTTCAGTTAAGGTt
aagccaattttcattcattgattGAGTCCTCTCCTGAAGCTTCCAATTTG
TGAAggaaattttatgaattttttggacctccatttctttttttttatct
caCAATTGATCACCTGGGAATCAATTTGAAAGAATGGCTGGCAAACTTGC
TTTATATAATTCACATAACCTTTTACATAATGAGCATTTTATTTTAGACA
AAAATTAGGGGTTGTTttagaaaatcatgaaaaaactaaatttgggtAGG
AACTTATTTTGATGAGACGGCAATATTTTTAAGTCCACTAAAgtgtagac
tagtaaactagtcggttattacttataataaaactgtcaatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041563XLOC_041563Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066424-exon-scaffold_455-1491911889:338263..338691TCONS_00066424-exon-scaffold_455-1491911889:338263..338691Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1510915933:338263..338691TCONS_00066424-exon-scaffold_455-1510915933:338263..338691Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1575043694:338263..338691TCONS_00066424-exon-scaffold_455-1575043694:338263..338691Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1491911889:341544..341959TCONS_00066424-exon-scaffold_455-1491911889:341544..341959Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1510915933:341544..341959TCONS_00066424-exon-scaffold_455-1510915933:341544..341959Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1575043694:341544..341959TCONS_00066424-exon-scaffold_455-1575043694:341544..341959Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1491911889:343074..343142TCONS_00066424-exon-scaffold_455-1491911889:343074..343142Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1510915933:343074..343142TCONS_00066424-exon-scaffold_455-1510915933:343074..343142Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1575043694:343074..343142TCONS_00066424-exon-scaffold_455-1575043694:343074..343142Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1491911889:343487..343603TCONS_00066424-exon-scaffold_455-1491911889:343487..343603Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1510915933:343487..343603TCONS_00066424-exon-scaffold_455-1510915933:343487..343603Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1575043694:343487..343603TCONS_00066424-exon-scaffold_455-1575043694:343487..343603Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1491911889:344866..345035TCONS_00066424-exon-scaffold_455-1491911889:344866..345035Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1510915933:344866..345035TCONS_00066424-exon-scaffold_455-1510915933:344866..345035Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1575043694:344866..345035TCONS_00066424-exon-scaffold_455-1575043694:344866..345035Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1491911889:345360..345606TCONS_00066424-exon-scaffold_455-1491911889:345360..345606Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1510915933:345360..345606TCONS_00066424-exon-scaffold_455-1510915933:345360..345606Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1575043694:345360..345606TCONS_00066424-exon-scaffold_455-1575043694:345360..345606Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1491911889:345728..345828TCONS_00066424-exon-scaffold_455-1491911889:345728..345828Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1510915933:345728..345828TCONS_00066424-exon-scaffold_455-1510915933:345728..345828Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1575043694:345728..345828TCONS_00066424-exon-scaffold_455-1575043694:345728..345828Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1491911889:346185..347055TCONS_00066424-exon-scaffold_455-1491911889:346185..347055Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1510915933:346185..347055TCONS_00066424-exon-scaffold_455-1510915933:346185..347055Clytia hemisphaericaexon
TCONS_00066424-exon-scaffold_455-1575043694:346185..347055TCONS_00066424-exon-scaffold_455-1575043694:346185..347055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:338263..347055 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00066424 vs. Swiss-Prot (Human)
Match: OGT1 (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3)

HSP 1 Score: 919.842 bits (2376), Expect = 0.000e+0
Identity = 431/525 (82.10%), Postives = 483/525 (92.00%), Query Frame = 3 
Query:  414 NAEGSVQTVSTLALAEAAHREYQAGNYESAEKLCMQWWRRETDSTGCLLLLSSIHFQCRRLDQSAQFSQLAIKQNPMLAEAFSNLGNVLKEKGQVKDALANYRHAVKLKPDFIDGYINLAAALVTAGDLEGAVQAYATALNYNPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQIDQNFLDAYINLGNVLKEARIFDRAVTAYLRALTINPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAYCNLANALKEQGKVEESEECYNTALTLCPSHADSLNNLANIKREQGKIEDSIGLYMKALQVFPEFAAAHSNLASILQQQGKLHEALMHYKDAIRIHPTFADAYSNMGNALKEMQDIQGAIQCYTRAIQINPGFADAHSNLASVYKDSGNIAEAIQSYRTALKLKPEFPDAYCNLAHCLQIICDWNDYDNRMKKLLTIVDDQLGKNRLPSVHPHHTMLYPLSPQQRKAIANRHGNLCLDKV 1988
            + E + + +S   LAE AHREYQAG++E+AE+ CMQ WR+E D+TG LLLLSSIHFQCRRLD+SA FS LAIKQNP+LAEA+SNLGNV KE+GQ+++A+ +YRHA++LKPDFIDGYINLAAALV AGD+EGAVQAY +AL YNP+LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAV +D NFLDAYINLGNVLKEARIFDRAV AYLRAL+++PNHA+VHGNLACVYYEQGLIDLA+DTY+RAIELQP+FPDAYCNLANALKE+G V E+E+CYNTAL LCP+HADSLNNLANIKREQG IE+++ LY KAL+VFPEFAAAHSNLAS+LQQQGKL EALMHYK+AIRI PTFADAYSNMGN LKEMQD+QGA+QCYTRAIQINP FADAHSNLAS++KDSGNI EAI SYRTALKLKP+FPDAYCNLAHCLQI+CDW DYD RMKKL++IV DQL KNRLPSVHPHH+MLYPLS   RKAIA RHGNLCLDK+
Sbjct:   11 STEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKI 535
The following BLAST results are available for this feature:
BLAST of TCONS_00066424 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OGT10.000e+082.10UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
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