TCONS_00066430 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066430
Unique NameTCONS_00066430
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2133

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066430 ID=TCONS_00066430|Name=TCONS_00066430|organism=Clytia hemisphaerica|type=transcript|length=2133bp
TGAGTGAAAATGATTACGCATACCAATGTTTTTCCAAACCTTTACAAACT
GCTGAATTAAAAAGTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGAT
CTGGCAAAATGGTGATGGGCTCACCCAACGCTGAAGGCTCTGTACAAACA
GTTTCCACACTGGCGCTTGCGGAAGCTGCACATCGAGAATACCAAGCTGG
TAACTATGAAAGTGCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGA
CTGATAGTACTGGATGCCTCTTACTTCTATCATCCATTCATTTTCAATGC
AGAAGGCTGGACCAATCTGCACAATTCAGTCAACTTGCCATAAAACAGAA
CCCGATGCTTGCAGAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAA
AAGGCCAAGTTAAAGATGCACTCGCAAATTACAGACATGCAGTCAAACTC
AAACCAGATTTCATTGACGGCTACATTAATCTTGCTGCTGCACTTGTTAC
TGCTGGTGATTTAGAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATT
ATAATCCTGAACTATATTGTGTACGAAGTGATCTTGGAAATCTACTGAAA
GCACTTGGTCGACTTGAAGAAGCTAAGGCATGTTATCTCAAAGCCATTGA
AACTCAACCAAACTTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTA
ATGCTCAAGGGGAAATATGGCTTGCCATTCACCATTTTGAGAAAgcTGTT
CAAATTGACCAAAACTTTCTTGATGCCTACATAAATCTTGGCAATGTGCT
CAAAGAAGCCAGAATATTTGACAGAGCTGTGACTGCCTACTTGCGTGCAC
TAACAATAAACCCAAATCATGCTATTGTCCATGGAAATTTAGCATGTGTT
TACTATGAGCAAGGGCTCATTGATTTGGCAGTTGATACTTACAAAAGAGC
TATTGAACTACAACCAAACTTCCCTGATGCTTACTGTAATTTGGCAAATG
CTCTTAAGGAACAAGGCAAAGTTGAAGAATCAGAGGAATGTTATAACACA
GCTCTAACCCTATGTCCATCACATGCAGACTCGTTAAATAATCTAGCAAA
CATCAAAAGGGAACAAGGCAAAATTGAAGATTCCATTGGATTGTACATGA
AAGCGCTACAGGTATTACCCGATTTTGCAGTGGGATACTCCAATTTAGCT
TGTGTCTTACAAGAGCAAGGACGCCTCAAGGAAGCTTTACTGTATTATCA
AGAGGCAGTGAGAATCCATCCGACTTTTGCTGATGCATACTCAAACATGG
GGAATGCCTTGAAGGAAATGCAGGATATTCAAGGTGCAATCCAGTGCTAC
ACCAGAGCCATTCAAATAAATCCTGGTTTTGCAGATGCCCATAGTAATCT
TGCATCAGTATACAAAGACTCAGGAAATATTGCTGAGGCTATTCAATCCT
ATAGAACTGCTCTTAAATTGAAACCAGAGTTTCCAGATGCTTATTGTAAC
CTTGCACATTGCTTACAAATAATTTGTGATTGGAATGATTATGATAATCG
TATGAAAAAACTGTTAACAATAGTTGATGATCAACTTGGTAAAAATCGAT
TGCCTTCAGTTCATCCGCACCACACCATGTTATATCCTTTGTCCCCACAA
CAAAGAAAGGCTATTGCTAATCGTCATGGAAACCTTTGTCTTGATAAGGT
ATGTAATGACTGGTTTTCAATAACTTGAATTACAGTATGATATCTTTAGT
CAcataactttgtattgaaaACCCAGCTTCAGTTAAGGTtaagccaattt
tcattcattgattGAGTCCTCTCCTGAAGCTTCCAATTTGTGAAggaaat
tttatgaattttttggacctccatttctttttttttatctcaCAATTGAT
CACCTGGGAATCAATTTGAAAGAATGGCTGGCAAACTTGCTTTATATAAT
TCACATAACCTTTTACATAATGAGCATTTTATTTTAGACAAAAATTAGGG
GTTGTTttagaaaatcatgaaaaaactaaatttgggtAGGAACTTATTTT
GATGAGACGGCAATATTTTTAAGTCCACTAAAgtgtagactagtaaacta
gtcggttattacttataataaaactgtcaatca
Run BLAST on NCBI

transcript from alignment at scaffold_455:338550..347055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066430 ID=TCONS_00066430|Name=TCONS_00066430|organism=Clytia hemisphaerica|type=transcript|length=8506bp|location=Sequence derived from alignment at scaffold_455:338550..347055+ (Clytia hemisphaerica)
TGAGTGAAAATGATTACGCATACCAATGTTTTTCCAAACCTTTACAAACT
GCTGAATTAAAAAGTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGAT
CTGGCAAAATGGTGATGGGCTCACCCAACGCTGAAGGCTCTGGTAAGTTA
GTATTTGAGACTGGGATTGCGATTGATGGACTGACGTTATTCCCGAGGGA
AGAGTGTGCGACTTGGCACTTCCACTTTCGTTTTGAACAAAAGGAGGGGA
AAAAACTTGCGACATGAAAGGGAAGTGGTACGATCACCAGCGGGAATGAC
TTTTAGATGGTTCTTATCCTATGCCTACtctaaaaaatttttgtttacac
tGTTTCAGACCTCCCTTAGAAtattattgtttcaaaaagGAAATGAGTTG
ACTCTGGAGCTTATTATAAGCTTATTTTTgtgttgtgattttttttgaaa
tatttgctatAATTTGCTTTGCGAAGTCCTGAGCCATTTTTTGGGGGCAA
ATGGGTACTGTTTAGTATGTCTCAGCATCAGAGCAGTACAGGGAACCTTT
TCAAACCCTGAAAATGTCTTTAAGAGTTGTGAAACCAGCCTTCAGCAGCC
TGTAGAAGGTTCTCAAAATCTGATCAAACAAACTTGTCGAATCCAATCAA
ACAATtgaactaatcaaactccatcgaacgattaaagttcaattaaaaaa
attaatcaaacctaatcaaacactcacaatttttgaagcaatagcagttc
gattggttcggtcaggaaaaaaacttcgattagttcgatgatattaaatc
ctcatatcttcccttgcttgcaaaaactttatcctgccacgcgattgcca
tttcgacagttcccggacttaacaaCTTAAagtttattgtacccggatat
ttgtccgCGGCCCCTTTGTTGCGATTTTGCACGCAGCCGAGTGGTGGATT
CCTACGCCtcaacaaaccgcctctggcgctaaaaggatacagggaAAGTG
CGTAATCCATAATCGGtttaatttcccgatttacattctgaatttggctt
tgaaaagaagctaatatacggtggtggagcagcacaaacttgtcgaacaa
ttaattggtttatcgaactgattgaaccgaaacccattgataGAACTTAT
TAAACACTCAGGATCTTTTAAtaaatcttagagttcgattaattatTTTA
ATCAATCTTTAATCGTTTgatgaagttcgattagttcaattgttcgattg
gttcgacaagtttgattgatcgggtctggtataTTCcttgaagtcaggta
acttgcatcagtggagggaaacatACAtacccctcaaatgaatgacctgt
ctggtcattaaaatacaaagttaaatacaaacaaaaatggtagagtagag
ctgcgagcggagctgcatggttcatttgttttgaaatttttctgctttgt
ttggtcagtcatttgagggctaatagaccttttttcaaagaggacgtctt
GTTGAAtgattatgtagtccagccgtaaaaacaatgatagagccatgcat
aattactgtatcatgcatattgtaataattatgcatggttttatcattgt
ttttctgctggactacataattattcaacagggtggcctctttgaaaaag
gtctattgaagtttccctccactgatgatgcaagttacccaacttcacgg
tatAGAAATGTAGGGCTCCctaattttaaaatatattttttgggaGATCG
TAAAATACAGTAGTTGCTTCCTCAAGATttctaagccaatcaaaatatgT
GCACAGAAAACTGTGCTAGCAGTGGCGTTGTGACaagcggagcttttttg
aaaggGCGCCAAAAGAGACTTTTTTAATTGCCCTATCCTTAAATATCATA
CTTTAGGCGCCTTAAATCGCGCCCCTGGatcaattttactgagatagttt
taaaatacttgcaatttttttttgctcacttcGCTTGCAATACAGCTAAT
TGGTAACTTCATGCAATCTTTAGctaaatttacaagtttttttgtgtaca
atatagcattaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagccaaagaaatttttagaa
tcataatttccaaaacttcagaaaataacagaagaatgaagaagagaatt
acaaacaaaattggtgattttatttttgtttgatcTCTTATAAGTAACAC
AACTTATAATAACAAcaacattcgaaaacaatagaatgtcttcatttctc
tCAAGATTAAAGATAGGGGATAATGCGCGAAATTTTTTACCCCccccttc
ataatttttttaccaagcatagggttaagcatatatagtcgaggctcaaa
attgagctttacttaagcatagtgagcttcagccgaaatttaccgtatgc
ttataaaacgaaATGAGTGTATTGAATGAAAAGttaactgcgccccaaga
ccaatttgctgacaagGGGGCTTGGAAGCTTTGGCAATTTGCAAGAgtgt
tttccattcatttttggatttctcaacaattattatattttatagTTAGA
GATTGTAAGAGTTTGTGCTTAAAAGGACGAAAAGAGAGGGGGTtgaggaa
ttttcatttttaagagggGTTGATCTAAAAAAGGGGGTACGCtatcaaaa
aatcagaaagataaGATCTAGCATACAAATTTTTGTTGCTAGTTTTTTCA
CTGATTACCTTTTTCCTCAAATCAATGTAGTTTTCTTCAACAAACTTCAC
ATGCAGTGTTGCTGAACAATGTCTCACAACCCTTCATTTTTTAGTACAAA
CAGTTTCCACACTGGCGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCT
GGTAACTATGAAAGTGCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGA
GACTGATAGTACTGGATGCCTCTTACTTCTATCATCCATTCATTTTCAAT
GCAGAAGGCTGGACCAATCTGCACAATTCAGTCAACTTGCCATAAAACAG
AACCCGATGCTTGCAGAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGA
AAAAGGCCAAGTTAAAGATGCACTCGCAAATTACAGACATGCAGTCAAAC
TCAAACCAGATTTCATTGACGGCTACATTAATCTTGCTGCTGCACTTGTT
ACTGCTGGTGATTTAGAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAA
TTATAATCCTGTAAGTCAAATTTGTACAGATTTCAGCATTCACTGATTGG
GGACTTGCTAAATCATTTTCAGGCTCTTATGTTTGTATGTCATACACTAA
TCTGTGTAAGGCTCATTTTCTATATAGAGCCAATTTAttttatgcttata
gaaaagtgaataaaattttatatacTTTTCAGGAACTATATTGTGTACGA
AGTGATCTTGGAAATCTACTGAAAGCACTTGGTCGACTTGAAGAAGCTAA
GGTATGTAATGAGAATTCTTTTATACCTCTTTACTTTATGAACAGTTTTT
CGCTTCCCTAAAGAGAAACATCTGAATCTAATTGCCTCTTTCTTTATTTT
CNTAAGAGGGGGTTGATCTAAAAAAGGGGGTACGCtgtcaaaaaatcaga
aagataaGATCTAGCATACAAATTTTTGTTGCTAGTTTTTCACTGATTAC
CTTTTTCCTCAAATCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTG
TTGCGGAACAATGTCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCC
ACACTGGCGCTTGCGGAAGCTGCACATCGAGAATACCAAGCTGGTAACTA
TGAAAGTGCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATA
GTACTGGATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGG
CTGGACCAATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGAT
GCTTGCAGAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCC
AAGTTAAAGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCA
GATTTCATTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGG
TGATTTAGAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATC
CTGTAAGTCAAATTTGTACAGATTTCAGCATTCACTGATTGGGGACTTGC
TAAATCATTTTCAGGCTCTTATGTTTGTATGTCATACACTAATCTGTGTA
AGGCTCATTTTCTATATAGAGCCAATTTAttttatgcttatagaaaagtg
aataaaattttatatacTTTTCAGGAACTATATTGTGTACGAAGTGATCT
TGGAAATCTACTGAAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTA
ATGAGAATTCTTTATACCTCTTTACTTTATGAACCGTTTTTCGCTTCCCT
AAAGAGAAACATCTGAATCTAATTGcctctttctttattttctatGGTTC
CAAACAGGGTATCAACTGTGAATCAACTACATGGAATCCTCAATGATGCT
GTTTATCCTGACCAGTCACACATATTTTATCTTAGCACTAGAGGATTGTG
AAAGCTATTACTAGAAAAACTCTTTCTCACTAGACCTAGAACATCTAATG
ACTAAATCTTAAGTTAATAGCCTTTTCAATCTTCTGATAATAACTTGTGA
TTGTTACATTGGCCATGATTATTTTTCTTCAATGAAGGCATGTTATCTCA
AAGCCATTGAAACTCAACCAAACTTTGCTGTGGCTTGGAGCAACCTTGGA
TGTGTATTTAATGCTCAAGGGGAAATATGGCTTGCCATTCACCATTTTGA
GAAAGTAAGTTTTGTCTATCAGAGGGAGTTGGTACTCAAATCTCAGACAT
AGTGGTGTTGCAAAAGGTGGAATGCAAAATACaaagatttgagatttttt
ttttgaaaaaacttttgtaCTCATTGACTATTTGACAAATTCAATTTGTG
CCAAAAAGGGTTTTTGCATTGCATCGGtgtcaaaatgttttgaaagaatT
GGTATAATTCATGTGTACTAAAATGCCACTTTCTAAatctttgggggggg
gggtggtatgtaaaatattctcaaaatcCCCTTTCAGCAACACTTATCTA
GGTCTGACTCTTCCTGTCTATAAATTAATCGTATTCCCTGTCTTTTTCTA
TCATTGAAGCTTTTGACATTAACAGATTCTGTGAATTAAAGCTCCCATTT
CTCTTGTTTGCCAATTCATATTGCATTAGGAAGTGAcatacattttattt
ttataagcaagtgtatgccccttggtcaggctcaaGTATgattaagttct
caaagcatccaggcatagtttatgcttattatatgctgatgaatcatgct
tatgattcaccttgagccaagtttttagtgaaattacAGAAATGtcgtaa
aaatttgttcatatTTTGGGAGCAGtcgaatgtagctagccgtggaattt
cttttttttttacttgacctctctaccaaacctttttaaacagataagaA
ATggcaacttgaaaaatatttcaggctgacacaTATGCTTATGCTATGCT
TAGGAATTcagcaaatctgagccttcatatgcttataagcgttctgctta
taaaaaaaaaacatgtagtgtcCTGTCCtcatgattgaaaaattcaGTCT
GCTTTTCTAAGcatctttgtttacattaacccattttcgttctattttgt
ctagtattccttttgcaacaaaattttacgtttgtgtcaggttgacattt
gagaaatttttatgGGTATATTGGaggaactgatattttcagaatttttt
ggggggaaatCAAAAAAGGGGGCAAACAAAAAAACTGTCATAGGAGAAaa
aagaatttggtggggggaacaaaccctggagtgAGTGGGTAAAACCCATG
TTGTTCACAAAGAACCTCATTAAGGCTGACTTTATCAAGATCTGTATCAG
ATAACTAATTTTACCCCATTTTCAGTTCACATTtacttttctttgaaata
acTTCAGCCACTTTTGAAACGCCTCaagaaaacagaaaatgaaaagtttt
gaaaattatttttcaggcTGTTCAAATTGACCAAAACTTTCTTGATGCCT
ACATAAATCTTGGCAATGTGCTCAAAGAAGCCAGAATATTTGACAGAGCT
GTGACTGCCTACTTGCGTGCACTAACAATAAACCCAAATCATGCTATTGT
CCATGGAAATTTAGCATGTGTTTACTATGAGCAAGGGTAAGAAAtctttt
ccaatattttttcatttcttaatCCACACATTGCTTGGATTAGTTTCCCT
GTAATAATGTGACACCTACTTCCAGGTTGGCCACCCTTTGCTTTGTCCAA
AGTAATTTTATTGCAGCTGTTCATAGCTCTTTATGATTTGAAGGATGGAT
CAACTATAAAGTGAATTGTTTTAGTTCTGTTTATTATGACAGCATACCTA
TCACATGCAGCTACATTTAATCTTTGAGCATCAACACTGTCACTTTGAAG
ACTTATTGCTGACAGAAATCTCACAAATTTAGTGAGCAAAATTGTCTTAT
TCATTTTCAGGCTCATTGATTTGGCAGTTGATACTTACAAAAGAGCTATT
GAACTACAACCAAACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCT
TAAGGAACAAGGCAAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTC
TAACCCTATGTCCATCACATGCAGACTCGTTAAATAATCTAGCAAACATC
AAAAGGGAACAAGGCAAAATTGAAGATTCCATTGGATTGTACATGAAAGC
GCTACAGGTGAGCCTAATAAACTATGTAATaagattgaaaattgatttca
gatttttttacatattaGACAGAAAGGGTAATTGAGTTGAGGGTGTGGTT
AACAATACCCAATTTATATTTGTCACAGGTCTTTCCAGAGTTTGCTGCAG
CCCACTCTAATTTAGCAAGTATTTTACAACAACAAGGAAAACTCCACGAA
GCATTGATGCATTACAAAGATGCAATAAGGTATTTAAAATGATTGTGTAA
TGCACCTTATTCATTTTCCATAAATACTGTCCTCTTGCAGGTATTACCCG
ATTTTGCAGTGGGATACTCCAATTTAGCTTGTGTCTTACAAGAGCAAGGA
CGCCTCAAGGAAGCTTTACTGTATTATCAAGAGGCAGTGAGGTATTGTAA
TGGCATTTTTTAATAAGCTGAAAGTTTTTCTCTTACATGTCCAATATAAC
CTTTTATTACAAGTTTATTTTTTGTAAGATTTAATTTGCTTGTTTTGTTT
CTACTAAAATGACACCTTTTAAAATGCTAATGTAATGTGTTTCTTCTCAT
TTGAAATAAACTTTTTTTCAACAATTTTATTTCAGAATCCATCCGACTTT
TGCTGATGCATACTCAAACATGGGGAATGCCTTGAAGGAAATGCAGGATA
TTCAAGGTGCAATCCAGTGCTACACCAGAGCCATTCAAATAAATCCTGGT
TTTGCAGATGCCCATAGTAATCTTGCATCAGTATACAAAGACTCAGGAAA
TATTGCTGAGGCTATTCAATCCTATAGAACTGCTCTTAAATTGAAACCAG
AGTTTCCAGATGCTTATTGTAACCTTGCACATTGCTTACAAATAATTTGT
GATTGGAATGATTATGATAATCGTATGAAAAAACTGTTAACAATAGTTGA
TGATCAACTTGGTAAAAATCGATTGCCTTCAGTTCATCCGCACCACACCA
TGTTATATCCTTTGTCCCCACAACAAAGAAAGGCTATTGCTAATCGTCAT
GGAAACCTTTGTCTTGATAAGGTATGTAATGACTGGTTTTCAATAACTTG
AATTACAGTATGATATCTTTAGTCAcataactttgtattgaaaACCCAGC
TTCAGTTAAGGTtaagccaattttcattcattgattGAGTCCTCTCCTGA
AGCTTCCAATTTGTGAAggaaattttatgaattttttggacctccatttc
tttttttttatctcaCAATTGATCACCTGGGAATCAATTTGAAAGAATGG
CTGGCAAACTTGCTTTATATAATTCACATAACCTTTTACATAATGAGCAT
TTTATTTTAGACAAAAATTAGGGGTTGTTttagaaaatcatgaaaaaact
aaatttgggtAGGAACTTATTTTGATGAGACGGCAATATTTTTAAGTCCA
CTAAAgtgtagactagtaaactagtcggttattacttataataaaactgt
caatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041563XLOC_041563Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066430-exon-scaffold_455-1491911889:338550..338691TCONS_00066430-exon-scaffold_455-1491911889:338550..338691Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1510915933:338550..338691TCONS_00066430-exon-scaffold_455-1510915933:338550..338691Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1575043694:338550..338691TCONS_00066430-exon-scaffold_455-1575043694:338550..338691Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1491911889:342486..342901TCONS_00066430-exon-scaffold_455-1491911889:342486..342901Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1510915933:342486..342901TCONS_00066430-exon-scaffold_455-1510915933:342486..342901Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1575043694:342486..342901TCONS_00066430-exon-scaffold_455-1575043694:342486..342901Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1491911889:343074..343142TCONS_00066430-exon-scaffold_455-1491911889:343074..343142Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1510915933:343074..343142TCONS_00066430-exon-scaffold_455-1510915933:343074..343142Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1575043694:343074..343142TCONS_00066430-exon-scaffold_455-1575043694:343074..343142Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1491911889:343487..343603TCONS_00066430-exon-scaffold_455-1491911889:343487..343603Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1510915933:343487..343603TCONS_00066430-exon-scaffold_455-1510915933:343487..343603Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1575043694:343487..343603TCONS_00066430-exon-scaffold_455-1575043694:343487..343603Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1491911889:344866..345035TCONS_00066430-exon-scaffold_455-1491911889:344866..345035Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1510915933:344866..345035TCONS_00066430-exon-scaffold_455-1510915933:344866..345035Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1575043694:344866..345035TCONS_00066430-exon-scaffold_455-1575043694:344866..345035Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1491911889:345360..345606TCONS_00066430-exon-scaffold_455-1491911889:345360..345606Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1510915933:345360..345606TCONS_00066430-exon-scaffold_455-1510915933:345360..345606Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1575043694:345360..345606TCONS_00066430-exon-scaffold_455-1575043694:345360..345606Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1491911889:345890..345990TCONS_00066430-exon-scaffold_455-1491911889:345890..345990Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1510915933:345890..345990TCONS_00066430-exon-scaffold_455-1510915933:345890..345990Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1575043694:345890..345990TCONS_00066430-exon-scaffold_455-1575043694:345890..345990Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1491911889:346185..347055TCONS_00066430-exon-scaffold_455-1491911889:346185..347055Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1510915933:346185..347055TCONS_00066430-exon-scaffold_455-1510915933:346185..347055Clytia hemisphaericaexon
TCONS_00066430-exon-scaffold_455-1575043694:346185..347055TCONS_00066430-exon-scaffold_455-1575043694:346185..347055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:338550..347055 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	2.65217	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00066430 vs. Swiss-Prot (Human)
Match: OGT1 (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3)

HSP 1 Score: 902.894 bits (2332), Expect = 0.000e+0
Identity = 421/525 (80.19%), Postives = 480/525 (91.43%), Query Frame = 1 
Query:  127 NAEGSVQTVSTLALAEAAHREYQAGNYESAEKLCMQWWRRETDSTGCLLLLSSIHFQCRRLDQSAQFSQLAIKQNPMLAEAFSNLGNVLKEKGQVKDALANYRHAVKLKPDFIDGYINLAAALVTAGDLEGAVQAYATALNYNPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQIDQNFLDAYINLGNVLKEARIFDRAVTAYLRALTINPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAYCNLANALKEQGKVEESEECYNTALTLCPSHADSLNNLANIKREQGKIEDSIGLYMKALQVLPDFAVGYSNLACVLQEQGRLKEALLYYQEAVRIHPTFADAYSNMGNALKEMQDIQGAIQCYTRAIQINPGFADAHSNLASVYKDSGNIAEAIQSYRTALKLKPEFPDAYCNLAHCLQIICDWNDYDNRMKKLLTIVDDQLGKNRLPSVHPHHTMLYPLSPQQRKAIANRHGNLCLDKV 1701
            + E + + +S   LAE AHREYQAG++E+AE+ CMQ WR+E D+TG LLLLSSIHFQCRRLD+SA FS LAIKQNP+LAEA+SNLGNV KE+GQ+++A+ +YRHA++LKPDFIDGYINLAAALV AGD+EGAVQAY +AL YNP+LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAV +D NFLDAYINLGNVLKEARIFDRAV AYLRAL+++PNHA+VHGNLACVYYEQGLIDLA+DTY+RAIELQP+FPDAYCNLANALKE+G V E+E+CYNTAL LCP+HADSLNNLANIKREQG IE+++ LY KAL+V P+FA  +SNLA VLQ+QG+L+EAL++Y+EA+RI PTFADAYSNMGN LKEMQD+QGA+QCYTRAIQINP FADAHSNLAS++KDSGNI EAI SYRTALKLKP+FPDAYCNLAHCLQI+CDW DYD RMKKL++IV DQL KNRLPSVHPHH+MLYPLS   RKAIA RHGNLCLDK+
Sbjct:   11 STEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKI 535
The following BLAST results are available for this feature:
BLAST of TCONS_00066430 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OGT10.000e+080.19UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
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