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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066453 ID=TCONS_00066453|Name=TCONS_00066453|organism=Clytia hemisphaerica|type=transcript|length=1956bp
CAATTTTTTAtgaaagataaagaaaaacaCCTCCCGGATTATTGACGTTG
TGTTGATTGGTTACTGCTCATTATCCAATCAACGAATTCGAAGCGGCCTG
TTcaaaatattcataaaaatcGGGCTGTCATAATCAAAATACGTTGCTTG
TGTGTACATTGACCTTGTACATCAAAAACCTGTGAAGAATTACCTTACTG
AACCTTCAAACCATCATAAAAATGGCTGCATTACACAGACGAGCACTTGA
CAACCTCCGAAGTGAGAATGCAACATTAAAACAAGGACAAGTTAAAGCAA
CCAAAAACACTTTAAATCGACCAGCTCTTGCAAATATTTCTAATATTCAA
CGAAGACCTGCACTAGGAACCAAGAAGAAGGATGAAcataaagagataac
aaaaGGTCTCACTAGACATAAGGCATCAACACATCTCACAGCTACTGAGA
AAAAGGATGTCTTCATTTTCCAAGATGATAGTGAAGAAGAAACAAAGCAA
TTTGAGAATGATCAAATAGCAAAACTGACAGAACAAATGGCAGAGATTGA
TGTTGAAGATATTGATGCTGATGATTTGACCAACCCCTCACTCTGTGcag
aatatgttaaagatatctACAAATATATGCATGTCCTTGAGaaaaaactt
caaCCTAAAGATTACATGTCACGTCAAACGAATATCAATAAAAAGATGAG
AAGCATTTTGGTTGACTGGCTCATTCAAGTACAATCCAGATTTAGACTCC
TCCAAGAAACTTTATATTTGACAATCTACACAATCGACAGATTTCTTGCT
AAATGTGATGTCAGTCGATCAGAACTTCAACTGGTTGGTGTGACAGCTAT
GCTTATTGCATCCAAATATGAAGAAATGTATGCTCCCGAAATCGGTGACT
TTGTTTACATCACAGACAATGCATATTCCAAGGTGAAAATCAGAGCAATG
GAACAGAAAATGTTGAAAGCTTGTGAATTCGACTTCAGCAACCCACTTGC
CCTGCATTTCCTGAGAAGAAATTCAAAGGCTGGAGCTGTTGATGCCACAA
AACACACAATGGCAAAATATTTAATGGAATTAACACTAGTTGACTATGAT
ATGGCAACTTTGTTACCGTCACAAATCGCTGCAGCTGCCAGCTACTTATC
CACACAATTACTGGACAAAGAGAAAGCTGAATGGaCTCCAACGTTAGCAC
ACTATAGCACTTATTCAGAAGCAGCCATCTTCCCAATCGTTTGTCAAATG
GCTAAGCTTGTGTTGACCATGAACATGGAAGGTTCGAAATATCAAGCAGT
CAAAAGTAAATACGCTGAAagcaaatttatgaaaattagcCGATACCCTG
TACTGGTTGGACCTTACATGCGCGAATTGGCAGACCAAGTCGACAATGCT
TGAACCTTAAGATACTGGGATGGATTTTAAATGAGCTTTTTTATTTATGG
AAATTGCTTTAACAGATCTCAGCAGATCTTCAGTTTTATTTTGAGAAGAG
GGGTAAGTATTTCACTCCTTGGAAGTAGTGGGCACTTAAACATAACTCTA
AACGTCAAACTTAGTCTCTATGACACTTTGTTGTATATTTTGTACATCCA
ATATGAATCCGATAATTGACAATTACTGAACTCAAACATTAAATCATTCT
TGCTAAATAAATACGGCCCATTTTCACCTTTCTGTTGGCCTGGCTGCACT
TGGTATTACTTAGTATTTAACAAAAATGTAAATATGATATAAAAGTTCAG
GTAGTATTTTTTATCCGTATGATGAACACCTTTTGTAAATAGATTCTttt
gaaaacatattttattgaaagaaaaataacacaaattaaaatttgataat
attCAGCATTTGCTTAATTTAGTCCATGTTTCACAGAATGTAGTTGCCCC
ACGGGGAAGCAGTTAACGTCCACACTTCAGACAGgcaatatcaaaattca
ttgccg Run BLAST on NCBI protein sequence of TCONS_00066453-protein >TCONS_00066453-protein ID=TCONS_00066453-protein|Name=TCONS_00066453-protein|organism=Clytia hemisphaerica|type=polypeptide|length=393bp
MAALHRRALDNLRSENATLKQGQVKATKNTLNRPALANISNIQRRPALGT
KKKDEHKEITKGLTRHKASTHLTATEKKDVFIFQDDSEEETKQFENDQIA
KLTEQMAEIDVEDIDADDLTNPSLCAEYVKDIYKYMHVLEKKLQPKDYMS
RQTNINKKMRSILVDWLIQVQSRFRLLQETLYLTIYTIDRFLAKCDVSRS
ELQLVGVTAMLIASKYEEMYAPEIGDFVYITDNAYSKVKIRAMEQKMLKA
CEFDFSNPLALHFLRRNSKAGAVDATKHTMAKYLMELTLVDYDMATLLPS
QIAAAASYLSTQLLDKEKAEWTPTLAHYSTYSEAAIFPIVCQMAKLVLTM
NMEGSKYQAVKSKYAESKFMKISRYPVLVGPYMRELADQVDNA Run BLAST on NCBI transcript from alignment at scaffold_455:134235..138852- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066453 ID=TCONS_00066453|Name=TCONS_00066453|organism=Clytia hemisphaerica|type=transcript|length=4618bp|location=Sequence derived from alignment at scaffold_455:134235..138852- (Clytia hemisphaerica)
CAATTTTTTATGAAAGATAAAGAAAAACACCTCCCGGATTATTGACGTTG
TGTTGATTGGTTACTGCTCATTATCCAATCAACGAATTCGAAGCGGCCTG
TTCAAAATATTCATAAAAATCGGGCTGTCATAATCAAAATACGTTGCTTG
TGTGTACATTGACCTTGTACATCAAAAACCTGTGAAGAATTACCTTACTG
AACCTTCAAACCATCATAAAAATGGCTGCATTACACAGACGAGCACTTGT
AAGTAGATACATTTAACTTTTTGATGCACGATTTTTGACGTTTCATAGAA
TTTTTTATTAGTTCCAGAGCTATTGTATGTTTGTTCTATCATATTTGAAA
ATATCTGAGTTGTACACTCTATTTGTCTAATTATGGAAACAAATGGCATT
AGTCTCACCTACCTAGTGTTTCAAGATCCGAACTTAACAGTGTAAAATGT
TTTTTGAATATGTCCATTTTATTAAATAAAGGTTGGGATCAGGCTGGATC
TTGACCTGAATTTTGTTGCCGGCTCGTAAAAAATATTTTATAGTTCCTGT
CACCTGATCAACCCTGATTTTCAGCCCTGGGTTGGGGGGTACTAGGTATT
TTTACGGTACACATGTATTTTTACAACCGCTGCAATGCAAACAGAGCAAT
TTTTTGGATGGCTGCCTAAGAGATGTTGAATACCATGTGATCAACTATTG
CCAAAAACAGCAATTTTCATTTATTTTCTGCTGACTTTGCATTTCGTCGT
AAAGTATTTCCCTCTTCGGCAACATTATTTGCTGATAAAAGAGCAATTTA
AATGATATTTTTGTCTAAAACAGTGACTCTAAAATACTCCACGGTAAGGT
TTGGTTAGCTGTATATTGACATTTCCAACACTTTCTTACCTGGAGAGAAT
ATATTTGAATAATTTATTTTCCAGGACAACCTCCGAAGTGAGAATGCAAC
ATTAAAACAAGGACAAGTTAAAGCAACCAAAAACACTTTAAATCGACCAG
CTCTTGCAAATATTTCTAATATTCAACGAAGACCTGCACTAGGAACCAAG
AAGGTATGTATTTCAAAATATATTTCACTTCTCAAATTATGTAAATTAAC
ACATAGTGTTAGTTTATATACCTTCAGAAAAGTTGAAGAAGGGGGGGGGG
GGGGGGGGCAAAAATTTTTTTTAAAAAGGGGGGGGGGGAGGGGGGGGGGG
GGGGATGGGGGGGGGGGGGGGGGGGGGGGGTCAGAAATCTTTATGAAAAA
GGGGGGATAGCAAGGAAGGGGGGACAGTTTAAGAAGGGGGGCTTACATAT
ATATTGTAGAATATTTTCAAGCATTGGTTATAAAATTTGGTTAGGGGATG
CCAAGAAGGGGATCAGACCCCTTTCCGCACTTATGTAAGATAATGTTCGA
CAAACAGTTTCATACTATTCCATTAATTGAATCATGACCAAAAGGGACAT
TTCACCCAGTTCTGCCCAGTTGACAAAGTAAATTCTTTCACTTTGACAAT
TGCACAGTTTCTATGAAACATGTCAGGCCATTTTCTAGAAAGACAAGGAA
GCGTCAGCTTGGAACCAAAAAGGGCACTTTTTCTGGTGATTTTCTAACAA
AACTAATTACTACTAATTTCCACATATTTGTAACTTTTTGTTGGGGCAGC
GTCTGATAATCGGACCCTTAAAAGGCATAAAAAATGTTATAAAACTCTTC
AGTGATTGCCTTTCCATTATTAAAGCTTGAATATTTGGACGGGTCACAGG
CAAGAAGCAACAAAAATTATATAAAAAAATAAAAAATGGCCTGCATGATT
TATAAGACAGTGCTTGATTGAAATTGTCTTAACTCTTTTTTTCAGAAGGA
TGAACATAAAGAGATAACAAAAGGTCTCACTAGACATAAGGCATCAACAC
ATCTCACAGCTACTGAGAAAAAGGATGTCTTCATTTTCCAAGATGATAGT
GAAGAAGAAACAAAGCAATTTGAGAATGATCAAATAGCAAAACTGACAGA
ACAAATGGCAGAGATTGATGTTGAAGATATTGATGCTGATGATTTGACCA
ACCCCTCACTCTGTGCAGAATATGTTAAAGATATCTACAAATATATGCAT
GTCCTTGAGGTAAGTATTTTACTATATGCACCCTTCACAAGATTCTAAAT
GAATTGCTGTTAAGAATTATTGTTCTATGTGACTATTCAAGTGATTCAAA
GGACATGAAATTCTTAATATGTTACCTTCAAATTGCTGGCTTTTTTCTTT
GTTATCAGCAAAGTGTTCAATGGGCAAGCCTATTTTCTTTAAATACGATT
TTGACGTCAAACTGTCTTCCACCTTCTGGTTGCAATTGATGGATTGCCTG
GCTGAATAAAAGTATTGCCAGTAAGATGCTGATAGATTTGCTTGTATTAG
TTGGAAGAATTCTTCACGTGGTTAAAATCCCTTGGAGATTCAAATCATAT
AACTTTATTGCTTGCCAGTCTTATATTTTGGTTATCTAATTTTTCAGAAA
AAACTTCAACCTAAAGATTACATGTCACGTCAAACGAATATCAATAAAAA
GATGAGAAGCATTTTGGTTGACTGGCTCATTCAAGTACAATCCAGATTTA
GACTCCTCCAAGAAACTTTATATTTGACAATCTACACAATCGACAGATTT
CTTGCTGTAAGTCTATTTTTTCTTCATAAGTTGCATAGCAAGTGCCCAAA
AACAATTCCAAAGTTAATTCAAAAAGATAATTTTATTGCTTGTATTTTGT
ACATTAAACTCTATGTTAAGAACGGAAGTTGAATTGGATCAAACATTGTG
TTTATAGATAATATCTTTCAAGCTTTTTTACTTAAAATCCCTTTCCATAT
TATCATATTATCNGCATTTTGGTTGACTGGCTCATTCAAGTACAATCCAG
ATTTAGACTCCTCCAAGAAACTTTATATTTGACAATCTACACAATCGACA
GATTTCTTGCTGTAAGTCTATTTTTTCTTCATAAGTTGCATAGCAAGTGC
CCAAAAACAATTCCAAAGTTAATTCAAAAGATAATTTTATTGCTTGTATT
TTGTACATTAAACTCTATGTTAAGAACAGAAGTTGAATTAAATCAAACAT
TGTGTTTATAGATAATATCTTTCAAGCTTTTTTACTTAAAATTCCTTCCC
CATATTATTAGAAATGTGATGTCAGTCGATCAGAACTTCAACTGGTTGGT
GTGACAGCTATGCTTATTGCATCCAAATATGAAGAAATGTATGCTCCCGA
AATCGGTGACTTTGTTTACATCACAGACAATGCATATTCCAAGGTGAAAA
TCAGAGCAATGGAACAGAAAATGTTGAAAGCTTGTGAATTCGACTTCAGC
AACCCACTTGCCCTGCATTTCCTGAGAAGAAATTCAAAGGCTGGAGCTGT
AAGTATATAGTATAGATTTGCTTGATATACATGAACTCAGGCATTATATT
GTCCTACTGGAGACGGTCATAGTTTTCTTAACAACGTAATAAAGTCCATA
CATTTTCTCAACTTTTCTTTTCACAACAAACAGGTTGATGCCACAAAACA
CACAATGGCAAAATATTTAATGGAATTAACACTAGTTGACTATGATATGG
CAACTTTGTTACCGTCACAAATCGCTGCAGCTGCCAGCTACTTATCCACA
CAATTACTGGACAAAGAGAAAGCTGAATGGGTAAGACTTTCCTTTTCCAT
TTTAGAGCAGCGTTTCTTGTTTTTCCCACAGGGGCAAACCTGGAAACCAA
ACTGCTACAGGTCCAAGGTCTAAGTCGGGCATAAATTGATTTTCACAATA
GTCGATTATTTCAATGTGATATTACAAATCTTTATTTTCTTTATAGACTC
CAACGTTAGCACACTATAGCACTTATTCAGAAGCAGCCATCTTCCCAATC
GTTTGTCAAATGGCTAAGCTTGTGTTGACCATGAACATGGAAGGTTCGAA
ATATCAAGCAGTCAAAAGTAAATACGCTGAAAGCAAATTTATGAAAATTA
GCCGATACCCTGTACTGGTTGGACCTTACATGCGCGAATTGGCAGACCAA
GTCGACAATGCTTGAACCTTAAGATACTGGGATGGATTTTAAATGAGCTT
TTTTATTTATGGAAATTGCTTTAACAGATCTCAGCAGATCTTCAGTTTTA
TTTTGAGAAGAGGGGTAAGTATTTCACTCCTTGGAAGTAGTGGGCACTTA
AACATAACTCTAAACGTCAAACTTAGTCTCTATGACACTTTGTTGTATAT
TTTGTACATCCAATATGAATCCGATAATTGACAATTACTGAACTCAAACA
TTAAATCATTCTTGCTAAATAAATACGGCCCATTTTCACCTTTCTGTTGG
CCTGGCTGCACTTGGTATTACTTAGTATTTAACAAAAATGTAAATATGAT
ATAAAAGTTCAGGTAGTATTTTTTATCCGTATGATGAACACCTTTTGTAA
ATAGATTCTTTTGAAAACATATTTTATTGAAAGAAAAATAACACAAATTA
AAATTTGATAATATTCAGCATTTGCTTAATTTAGTCCATGTTTCACAGAA
TGTAGTTGCCCCACGGGGAAGCAGTTAACGTCCACACTTCAGACAGGCAA
TATCAAAATTCATTGCCG Coding sequence (CDS) from alignment at scaffold_455:134235..138852- >TCONS_00066453 ID=TCONS_00066453|Name=TCONS_00066453|organism=Clytia hemisphaerica|type=CDS|length=8274bp|location=Sequence derived from alignment at scaffold_455:134235..138852- (Clytia hemisphaerica)
ACTCCAACGTTAGCACACTATAGCACTTATTCAGAAGCAGCCATCTTCCC
AATCGTTTGTCAAATGGCTAAGCTTGTGTTGACCATGAACATGGAAGGTT
CGAAATATCAAGCAGTCAAAAGTAAATACGCTGAAAGCAAATTTATGAAA
ATTAGCCGATACCCTGTACTGGTTGGACCTTACATGCGCGAATTGGCAGA
CCAAGTCGACAATGCTTGAGTTGATGCCACAAAACACACAATGGCAAAAT
ATTTAATGGAATTAACACTAGTTGACTATGATATGGCAACTTTGTTACCG
TCACAAATCGCTGCAGCTGCCAGCTACTTATCCACACAATTACTGGACAA
AGAGAAAGCTGAATGGAAATGTGATGTCAGTCGATCAGAACTTCAACTGG
TTGGTGTGACAGCTATGCTTATTGCATCCAAATATGAAGAAATGTATGCT
CCCGAAATCGGTGACTTTGTTTACATCACAGACAATGCATATTCCAAGGT
GAAAATCAGAGCAATGGAACAGAAAATGTTGAAAGCTTGTGAATTCGACT
TCAGCAACCCACTTGCCCTGCATTTCCTGAGAAGAAATTCAAAGGCTGGA
GCTAAAAAACTTCAACCTAAAGATTACATGTCACGTCAAACGAATATCAA
TAAAAAGATGAGAAGCATTTTGGTTGACTGGCTCATTCAAGTACAATCCA
GATTTAGACTCCTCCAAGAAACTTTATATTTGACAATCTACACAATCGAC
AGATTTCTTGCTAAGGATGAACATAAAGAGATAACAAAAGGTCTCACTAG
ACATAAGGCATCAACACATCTCACAGCTACTGAGAAAAAGGATGTCTTCA
TTTTCCAAGATGATAGTGAAGAAGAAACAAAGCAATTTGAGAATGATCAA
ATAGCAAAACTGACAGAACAAATGGCAGAGATTGATGTTGAAGATATTGA
TGCTGATGATTTGACCAACCCCTCACTCTGTGCAGAATATGTTAAAGATA
TCTACAAATATATGCATGTCCTTGAGGACAACCTCCGAAGTGAGAATGCA
ACATTAAAACAAGGACAAGTTAAAGCAACCAAAAACACTTTAAATCGACC
AGCTCTTGCAAATATTTCTAATATTCAACGAAGACCTGCACTAGGAACCA
AGAAGATGGCTGCATTACACAGACGAGCACTTACTCCAACGTTAGCACAC
TATAGCACTTATTCAGAAGCAGCCATCTTCCCAATCGTTTGTCAAATGGC
TAAGCTTGTGTTGACCATGAACATGGAAGGTTCGAAATATCAAGCAGTCA
AAAGTAAATACGCTGAAAGCAAATTTATGAAAATTAGCCGATACCCTGTA
CTGGTTGGACCTTACATGCGCGAATTGGCAGACCAAGTCGACAATGCTTG
AGTTGATGCCACAAAACACACAATGGCAAAATATTTAATGGAATTAACAC
TAGTTGACTATGATATGGCAACTTTGTTACCGTCACAAATCGCTGCAGCT
GCCAGCTACTTATCCACACAATTACTGGACAAAGAGAAAGCTGAATGGAA
ATGTGATGTCAGTCGATCAGAACTTCAACTGGTTGGTGTGACAGCTATGC
TTATTGCATCCAAATATGAAGAAATGTATGCTCCCGAAATCGGTGACTTT
GTTTACATCACAGACAATGCATATTCCAAGGTGAAAATCAGAGCAATGGA
ACAGAAAATGTTGAAAGCTTGTGAATTCGACTTCAGCAACCCACTTGCCC
TGCATTTCCTGAGAAGAAATTCAAAGGCTGGAGCTAAAAAACTTCAACCT
AAAGATTACATGTCACGTCAAACGAATATCAATAAAAAGATGAGAAGCAT
TTTGGTTGACTGGCTCATTCAAGTACAATCCAGATTTAGACTCCTCCAAG
AAACTTTATATTTGACAATCTACACAATCGACAGATTTCTTGCTAAGGAT
GAACATAAAGAGATAACAAAAGGTCTCACTAGACATAAGGCATCAACACA
TCTCACAGCTACTGAGAAAAAGGATGTCTTCATTTTCCAAGATGATAGTG
AAGAAGAAACAAAGCAATTTGAGAATGATCAAATAGCAAAACTGACAGAA
CAAATGGCAGAGATTGATGTTGAAGATATTGATGCTGATGATTTGACCAA
CCCCTCACTCTGTGCAGAATATGTTAAAGATATCTACAAATATATGCATG
TCCTTGAGGACAACCTCCGAAGTGAGAATGCAACATTAAAACAAGGACAA
GTTAAAGCAACCAAAAACACTTTAAATCGACCAGCTCTTGCAAATATTTC
TAATATTCAACGAAGACCTGCACTAGGAACCAAGAAGATGGCTGCATTAC
ACAGACGAGCACTTACTCCAACGTTAGCACACTATAGCACTTATTCAGAA
GCAGCCATCTTCCCAATCGTTTGTCAAATGGCTAAGCTTGTGTTGACCAT
GAACATGGAAGGTTCGAAATATCAAGCAGTCAAAAGTAAATACGCTGAAA
GCAAATTTATGAAAATTAGCCGATACCCTGTACTGGTTGGACCTTACATG
CGCGAATTGGCAGACCAAGTCGACAATGCTTGAGTTGATGCCACAAAACA
CACAATGGCAAAATATTTAATGGAATTAACACTAGTTGACTATGATATGG
CAACTTTGTTACCGTCACAAATCGCTGCAGCTGCCAGCTACTTATCCACA
CAATTACTGGACAAAGAGAAAGCTGAATGGAAATGTGATGTCAGTCGATC
AGAACTTCAACTGGTTGGTGTGACAGCTATGCTTATTGCATCCAAATATG
AAGAAATGTATGCTCCCGAAATCGGTGACTTTGTTTACATCACAGACAAT
GCATATTCCAAGGTGAAAATCAGAGCAATGGAACAGAAAATGTTGAAAGC
TTGTGAATTCGACTTCAGCAACCCACTTGCCCTGCATTTCCTGAGAAGAA
ATTCAAAGGCTGGAGCTAAAAAACTTCAACCTAAAGATTACATGTCACGT
CAAACGAATATCAATAAAAAGATGAGAAGCATTTTGGTTGACTGGCTCAT
TCAAGTACAATCCAGATTTAGACTCCTCCAAGAAACTTTATATTTGACAA
TCTACACAATCGACAGATTTCTTGCTAAGGATGAACATAAAGAGATAACA
AAAGGTCTCACTAGACATAAGGCATCAACACATCTCACAGCTACTGAGAA
AAAGGATGTCTTCATTTTCCAAGATGATAGTGAAGAAGAAACAAAGCAAT
TTGAGAATGATCAAATAGCAAAACTGACAGAACAAATGGCAGAGATTGAT
GTTGAAGATATTGATGCTGATGATTTGACCAACCCCTCACTCTGTGCAGA
ATATGTTAAAGATATCTACAAATATATGCATGTCCTTGAGGACAACCTCC
GAAGTGAGAATGCAACATTAAAACAAGGACAAGTTAAAGCAACCAAAAAC
ACTTTAAATCGACCAGCTCTTGCAAATATTTCTAATATTCAACGAAGACC
TGCACTAGGAACCAAGAAGATGGCTGCATTACACAGACGAGCACTTACTC
CAACGTTAGCACACTATAGCACTTATTCAGAAGCAGCCATCTTCCCAATC
GTTTGTCAAATGGCTAAGCTTGTGTTGACCATGAACATGGAAGGTTCGAA
ATATCAAGCAGTCAAAAGTAAATACGCTGAAAGCAAATTTATGAAAATTA
GCCGATACCCTGTACTGGTTGGACCTTACATGCGCGAATTGGCAGACCAA
GTCGACAATGCTTGAGTTGATGCCACAAAACACACAATGGCAAAATATTT
AATGGAATTAACACTAGTTGACTATGATATGGCAACTTTGTTACCGTCAC
AAATCGCTGCAGCTGCCAGCTACTTATCCACACAATTACTGGACAAAGAG
AAAGCTGAATGGAAATGTGATGTCAGTCGATCAGAACTTCAACTGGTTGG
TGTGACAGCTATGCTTATTGCATCCAAATATGAAGAAATGTATGCTCCCG
AAATCGGTGACTTTGTTTACATCACAGACAATGCATATTCCAAGGTGAAA
ATCAGAGCAATGGAACAGAAAATGTTGAAAGCTTGTGAATTCGACTTCAG
CAACCCACTTGCCCTGCATTTCCTGAGAAGAAATTCAAAGGCTGGAGCTA
AAAAACTTCAACCTAAAGATTACATGTCACGTCAAACGAATATCAATAAA
AAGATGAGAAGCATTTTGGTTGACTGGCTCATTCAAGTACAATCCAGATT
TAGACTCCTCCAAGAAACTTTATATTTGACAATCTACACAATCGACAGAT
TTCTTGCTAAGGATGAACATAAAGAGATAACAAAAGGTCTCACTAGACAT
AAGGCATCAACACATCTCACAGCTACTGAGAAAAAGGATGTCTTCATTTT
CCAAGATGATAGTGAAGAAGAAACAAAGCAATTTGAGAATGATCAAATAG
CAAAACTGACAGAACAAATGGCAGAGATTGATGTTGAAGATATTGATGCT
GATGATTTGACCAACCCCTCACTCTGTGCAGAATATGTTAAAGATATCTA
CAAATATATGCATGTCCTTGAGGACAACCTCCGAAGTGAGAATGCAACAT
TAAAACAAGGACAAGTTAAAGCAACCAAAAACACTTTAAATCGACCAGCT
CTTGCAAATATTTCTAATATTCAACGAAGACCTGCACTAGGAACCAAGAA
GATGGCTGCATTACACAGACGAGCACTTACTCCAACGTTAGCACACTATA
GCACTTATTCAGAAGCAGCCATCTTCCCAATCGTTTGTCAAATGGCTAAG
CTTGTGTTGACCATGAACATGGAAGGTTCGAAATATCAAGCAGTCAAAAG
TAAATACGCTGAAAGCAAATTTATGAAAATTAGCCGATACCCTGTACTGG
TTGGACCTTACATGCGCGAATTGGCAGACCAAGTCGACAATGCTTGAGTT
GATGCCACAAAACACACAATGGCAAAATATTTAATGGAATTAACACTAGT
TGACTATGATATGGCAACTTTGTTACCGTCACAAATCGCTGCAGCTGCCA
GCTACTTATCCACACAATTACTGGACAAAGAGAAAGCTGAATGGAAATGT
GATGTCAGTCGATCAGAACTTCAACTGGTTGGTGTGACAGCTATGCTTAT
TGCATCCAAATATGAAGAAATGTATGCTCCCGAAATCGGTGACTTTGTTT
ACATCACAGACAATGCATATTCCAAGGTGAAAATCAGAGCAATGGAACAG
AAAATGTTGAAAGCTTGTGAATTCGACTTCAGCAACCCACTTGCCCTGCA
TTTCCTGAGAAGAAATTCAAAGGCTGGAGCTAAAAAACTTCAACCTAAAG
ATTACATGTCACGTCAAACGAATATCAATAAAAAGATGAGAAGCATTTTG
GTTGACTGGCTCATTCAAGTACAATCCAGATTTAGACTCCTCCAAGAAAC
TTTATATTTGACAATCTACACAATCGACAGATTTCTTGCTAAGGATGAAC
ATAAAGAGATAACAAAAGGTCTCACTAGACATAAGGCATCAACACATCTC
ACAGCTACTGAGAAAAAGGATGTCTTCATTTTCCAAGATGATAGTGAAGA
AGAAACAAAGCAATTTGAGAATGATCAAATAGCAAAACTGACAGAACAAA
TGGCAGAGATTGATGTTGAAGATATTGATGCTGATGATTTGACCAACCCC
TCACTCTGTGCAGAATATGTTAAAGATATCTACAAATATATGCATGTCCT
TGAGGACAACCTCCGAAGTGAGAATGCAACATTAAAACAAGGACAAGTTA
AAGCAACCAAAAACACTTTAAATCGACCAGCTCTTGCAAATATTTCTAAT
ATTCAACGAAGACCTGCACTAGGAACCAAGAAGATGGCTGCATTACACAG
ACGAGCACTTACTCCAACGTTAGCACACTATAGCACTTATTCAGAAGCAG
CCATCTTCCCAATCGTTTGTCAAATGGCTAAGCTTGTGTTGACCATGAAC
ATGGAAGGTTCGAAATATCAAGCAGTCAAAAGTAAATACGCTGAAAGCAA
ATTTATGAAAATTAGCCGATACCCTGTACTGGTTGGACCTTACATGCGCG
AATTGGCAGACCAAGTCGACAATGCTTGAGTTGATGCCACAAAACACACA
ATGGCAAAATATTTAATGGAATTAACACTAGTTGACTATGATATGGCAAC
TTTGTTACCGTCACAAATCGCTGCAGCTGCCAGCTACTTATCCACACAAT
TACTGGACAAAGAGAAAGCTGAATGGAAATGTGATGTCAGTCGATCAGAA
CTTCAACTGGTTGGTGTGACAGCTATGCTTATTGCATCCAAATATGAAGA
AATGTATGCTCCCGAAATCGGTGACTTTGTTTACATCACAGACAATGCAT
ATTCCAAGGTGAAAATCAGAGCAATGGAACAGAAAATGTTGAAAGCTTGT
GAATTCGACTTCAGCAACCCACTTGCCCTGCATTTCCTGAGAAGAAATTC
AAAGGCTGGAGCTAAAAAACTTCAACCTAAAGATTACATGTCACGTCAAA
CGAATATCAATAAAAAGATGAGAAGCATTTTGGTTGACTGGCTCATTCAA
GTACAATCCAGATTTAGACTCCTCCAAGAAACTTTATATTTGACAATCTA
CACAATCGACAGATTTCTTGCTAAGGATGAACATAAAGAGATAACAAAAG
GTCTCACTAGACATAAGGCATCAACACATCTCACAGCTACTGAGAAAAAG
GATGTCTTCATTTTCCAAGATGATAGTGAAGAAGAAACAAAGCAATTTGA
GAATGATCAAATAGCAAAACTGACAGAACAAATGGCAGAGATTGATGTTG
AAGATATTGATGCTGATGATTTGACCAACCCCTCACTCTGTGCAGAATAT
GTTAAAGATATCTACAAATATATGCATGTCCTTGAGGACAACCTCCGAAG
TGAGAATGCAACATTAAAACAAGGACAAGTTAAAGCAACCAAAAACACTT
TAAATCGACCAGCTCTTGCAAATATTTCTAATATTCAACGAAGACCTGCA
CTAGGAACCAAGAAGATGGCTGCATTACACAGACGAGCACTTACTCCAAC
GTTAGCACACTATAGCACTTATTCAGAAGCAGCCATCTTCCCAATCGTTT
GTCAAATGGCTAAGCTTGTGTTGACCATGAACATGGAAGGTTCGAAATAT
CAAGCAGTCAAAAGTAAATACGCTGAAAGCAAATTTATGAAAATTAGCCG
ATACCCTGTACTGGTTGGACCTTACATGCGCGAATTGGCAGACCAAGTCG
ACAATGCTTGAGTTGATGCCACAAAACACACAATGGCAAAATATTTAATG
GAATTAACACTAGTTGACTATGATATGGCAACTTTGTTACCGTCACAAAT
CGCTGCAGCTGCCAGCTACTTATCCACACAATTACTGGACAAAGAGAAAG
CTGAATGGAAATGTGATGTCAGTCGATCAGAACTTCAACTGGTTGGTGTG
ACAGCTATGCTTATTGCATCCAAATATGAAGAAATGTATGCTCCCGAAAT
CGGTGACTTTGTTTACATCACAGACAATGCATATTCCAAGGTGAAAATCA
GAGCAATGGAACAGAAAATGTTGAAAGCTTGTGAATTCGACTTCAGCAAC
CCACTTGCCCTGCATTTCCTGAGAAGAAATTCAAAGGCTGGAGCTAAAAA
ACTTCAACCTAAAGATTACATGTCACGTCAAACGAATATCAATAAAAAGA
TGAGAAGCATTTTGGTTGACTGGCTCATTCAAGTACAATCCAGATTTAGA
CTCCTCCAAGAAACTTTATATTTGACAATCTACACAATCGACAGATTTCT
TGCTAAGGATGAACATAAAGAGATAACAAAAGGTCTCACTAGACATAAGG
CATCAACACATCTCACAGCTACTGAGAAAAAGGATGTCTTCATTTTCCAA
GATGATAGTGAAGAAGAAACAAAGCAATTTGAGAATGATCAAATAGCAAA
ACTGACAGAACAAATGGCAGAGATTGATGTTGAAGATATTGATGCTGATG
ATTTGACCAACCCCTCACTCTGTGCAGAATATGTTAAAGATATCTACAAA
TATATGCATGTCCTTGAGGACAACCTCCGAAGTGAGAATGCAACATTAAA
ACAAGGACAAGTTAAAGCAACCAAAAACACTTTAAATCGACCAGCTCTTG
CAAATATTTCTAATATTCAACGAAGACCTGCACTAGGAACCAAGAAGATG
GCTGCATTACACAGACGAGCACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066453-exon-scaffold_455-1575043694:138605..138852 | TCONS_00066453-exon-scaffold_455-1575043694:138605..138852 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1575043694:137800..137928 | TCONS_00066453-exon-scaffold_455-1575043694:137800..137928 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1575043694:136744..137007 | TCONS_00066453-exon-scaffold_455-1575043694:136744..137007 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1575043694:136197..136355 | TCONS_00066453-exon-scaffold_455-1575043694:136197..136355 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1575043694:135455..135691 | TCONS_00066453-exon-scaffold_455-1575043694:135455..135691 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1575043694:135173..135319 | TCONS_00066453-exon-scaffold_455-1575043694:135173..135319 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1575043694:134235..135006 | TCONS_00066453-exon-scaffold_455-1575043694:134235..135006 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1510915933:138605..138852 | TCONS_00066453-exon-scaffold_455-1510915933:138605..138852 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1510915933:137800..137928 | TCONS_00066453-exon-scaffold_455-1510915933:137800..137928 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1510915933:136744..137007 | TCONS_00066453-exon-scaffold_455-1510915933:136744..137007 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1510915933:136197..136355 | TCONS_00066453-exon-scaffold_455-1510915933:136197..136355 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1510915933:135455..135691 | TCONS_00066453-exon-scaffold_455-1510915933:135455..135691 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1510915933:135173..135319 | TCONS_00066453-exon-scaffold_455-1510915933:135173..135319 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1510915933:134235..135006 | TCONS_00066453-exon-scaffold_455-1510915933:134235..135006 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1491911889:138605..138852 | TCONS_00066453-exon-scaffold_455-1491911889:138605..138852 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1491911889:137800..137928 | TCONS_00066453-exon-scaffold_455-1491911889:137800..137928 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1491911889:136744..137007 | TCONS_00066453-exon-scaffold_455-1491911889:136744..137007 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1491911889:136197..136355 | TCONS_00066453-exon-scaffold_455-1491911889:136197..136355 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1491911889:135455..135691 | TCONS_00066453-exon-scaffold_455-1491911889:135455..135691 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1491911889:135173..135319 | TCONS_00066453-exon-scaffold_455-1491911889:135173..135319 | Clytia hemisphaerica | exon |
| TCONS_00066453-exon-scaffold_455-1491911889:134235..135006 | TCONS_00066453-exon-scaffold_455-1491911889:134235..135006 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_455 | supercontig | scaffold_455:134235..138852 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005634 |
nucleus |
Blast
BLAST of TCONS_00066453 vs. Swiss-Prot (Human)
Match: CCNB1 (G2/mitotic-specific cyclin-B1 OS=Homo sapiens GN=CCNB1 PE=1 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 1.458e-92 Identity = 146/272 (53.68%), Postives = 193/272 (70.96%), Query Frame = 3
Query: 582 NPSLCAEYVKDIYKYMHVLEKK--LQPKDYMSRQTNINKKMRSILVDWLIQVQSRFRLLQETLYLTIYTIDRFLAKCDVSRSELQLVGVTAMLIASKYEEMYAPEIGDFVYITDNAYSKVKIRAMEQKMLKACEFDFSNPLALHFLRRNSKAGAVDATKHTMAKYLMELTLVDYDMATLLPSQIAAAASYLSTQLLDKEKAEWTPTLAHYSTYSEAAIFPIVCQMAKLVLTMNMEGSKYQAVKSKYAESKFMKISRYPVLVGPYMRELADQV 1391
+P+LC+EYVKDIY Y+ LE++ ++PK + R+ N MR+IL+DWL+QVQ +FRLLQET+Y+T+ IDRF+ V + LQLVGVTAM IASKYEEMY PEIGDF ++TDN Y+K +IR ME K+L+A F PL LHFLRR SK G VD +HT+AKYLMELT++DYDM PSQIAA A L+ ++LD EWTPTL HY +Y+E ++ P++ +AK V+ +N +K+ VK+KYA SK KIS P L +++LA V
Sbjct: 163 DPNLCSEYVKDIYAYLRQLEEEQAVRPKYLLGREVTGN--MRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAFCLALKILD--NGEWTPTLQHYLSYTEESLLPVMQHLAKNVVMVNQGLTKHMTVKNKYATSKHAKISTLPQLNSALVQDLAKAV 430
The following BLAST results are available for this feature:
|
