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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066469 ID=TCONS_00066469|Name=TCONS_00066469|organism=Clytia hemisphaerica|type=transcript|length=698bp
AAACGAAAAACAGGTTATTGTTTGGTTACTTGTTGGATTGTATCGGTCGT
TTTCACTGTCATATTTTCGTTGAAACCGAACCAAAATGAAGTTCGTTATA
TTGTTATTGTATACTTATGGCCTATTGAGgagttattgtttttattcatT
GCGATTCTGACTTATACgtatatttttgtgaaaatacgACATAACAGGAA
ATGTTCAATACGCTTAGTAACACAACTACAGTCAGTGAATTATATTATCC
CGATCGCATCTGGGAACATCGGAGAGCTTATACATAGAAACGGGAAACCA
CCAGATGCGACGATAGAAAATACTGTCAAAAGTGATATAAATGAAGATAT
TAATGACAGGGAATCAAATGTTGAAATACATCCGGGAAAAGACggaagtt
gtaaaaataatgatATAGTGAATATGGAAAATAACAATACAAAGAAAAGG
CGGATGAAGGAACGAGAAAAATTACGTAATAACAACAACTCGTTGAAGCG
AATCAAACAACGCTTATACCTACCATCTTTGTTGATAGCCACTTTCGTTT
TGTTTTGGATATTACCAGACCAAGTCGAGTTCTTTTATAGCGTAAACAAT
ATCCCGGTTACACCTATGTTCTCGtttaaaattaacattttttatGTGTT
GGCTCTGTCCGCTGATGCACTTATCTATGTTCTGGGTATTTCTCAGAT Run BLAST on NCBI protein sequence of TCONS_00066469-protein >TCONS_00066469-protein ID=TCONS_00066469-protein|Name=TCONS_00066469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
KRKTGYCLVTCWIVSVVFTVIFSLKPNQNEVRYIVIVYLWPIEELLFLFI
AILTYTYIFVKIRHNRKCSIRLVTQLQSVNYIIPIASGNIGELIHRNGKP
PDATIENTVKSDINEDINDRESNVEIHPGKDGSCKNNDIVNMENNNTKKR
RMKEREKLRNNNNSLKRIKQRLYLPSLLIATFVLFWILPDQVEFFYSVNN
IPVTPMFSFKINIFYVLALSADALIYVLGISQ Run BLAST on NCBI transcript from alignment at scaffold_455:22261..22958 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066469 ID=TCONS_00066469|Name=TCONS_00066469|organism=Clytia hemisphaerica|type=transcript|length=698bp|location=Sequence derived from alignment at scaffold_455:22261..22958 (Clytia hemisphaerica)
ATCTGAGAAATACCCAGAACATAGATAAGTGCATCAGCGGACAGAGCCAA
CACataaaaaatgttaattttaaaCGAGAACATAGGTGTAACCGGGATAT
TGTTTACGCTATAAAAGAACTCGACTTGGTCTGGTAATATCCAAAACAAA
ACGAAAGTGGCTATCAACAAAGATGGTAGGTATAAGCGTTGTTTGATTCG
CTTCAACGAGTTGTTGTTATTACGTAATTTTTCTCGTTCCTTCATCCGCC
TTTTCTTTGTATTGTTATTTTCCATATTCACTATatcattatttttacaa
cttccGTCTTTTCCCGGATGTATTTCAACATTTGATTCCCTGTCATTAAT
ATCTTCATTTATATCACTTTTGACAGTATTTTCTATCGTCGCATCTGGTG
GTTTCCCGTTTCTATGTATAAGCTCTCCGATGTTCCCAGATGCGATCGGG
ATAATATAATTCACTGACTGTAGTTGTGTTACTAAGCGTATTGAACATTT
CCTGTTATGTcgtattttcacaaaaatatacGTATAAGTCAGAATCGCAa
tgaataaaaacaataactcCTCAATAGGCCATAAGTATACAATAACAATA
TAACGAACTTCATTTTGGTTCGGTTTCAACGAAAATATGACAGTGAAAAC
GACCGATACAATCCAACAAGTAACCAAACAATAACCTGTTTTTCGTTT Coding sequence (CDS) from alignment at scaffold_455:22261..22958 >TCONS_00066469 ID=TCONS_00066469|Name=TCONS_00066469|organism=Clytia hemisphaerica|type=CDS|length=696bp|location=Sequence derived from alignment at scaffold_455:22261..22958 (Clytia hemisphaerica)
CTGAGAAATACCCAGAACATAGATAAGTGCATCAGCGGACAGAGCCAACA
CataaaaaatgttaattttaaaCGAGAACATAGGTGTAACCGGGATATTG
TTTACGCTATAAAAGAACTCGACTTGGTCTGGTAATATCCAAAACAAAAC
GAAAGTGGCTATCAACAAAGATGGTAGGTATAAGCGTTGTTTGATTCGCT
TCAACGAGTTGTTGTTATTACGTAATTTTTCTCGTTCCTTCATCCGCCTT
TTCTTTGTATTGTTATTTTCCATATTCACTATatcattatttttacaact
tccGTCTTTTCCCGGATGTATTTCAACATTTGATTCCCTGTCATTAATAT
CTTCATTTATATCACTTTTGACAGTATTTTCTATCGTCGCATCTGGTGGT
TTCCCGTTTCTATGTATAAGCTCTCCGATGTTCCCAGATGCGATCGGGAT
AATATAATTCACTGACTGTAGTTGTGTTACTAAGCGTATTGAACATTTCC
TGTTATGTcgtattttcacaaaaatatacGTATAAGTCAGAATCGCAatg
aataaaaacaataactcCTCAATAGGCCATAAGTATACAATAACAATATA
ACGAACTTCATTTTGGTTCGGTTTCAACGAAAATATGACAGTGAAAACGA
CCGATACAATCCAACAAGTAACCAAACAATAACCTGTTTTTCGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066469-exon-scaffold_455-1491911889:22261..22958 | TCONS_00066469-exon-scaffold_455-1491911889:22261..22958 | Clytia hemisphaerica | exon |
| TCONS_00066469-exon-scaffold_455-1510915933:22261..22958 | TCONS_00066469-exon-scaffold_455-1510915933:22261..22958 | Clytia hemisphaerica | exon |
| TCONS_00066469-exon-scaffold_455-1575043694:22261..22958 | TCONS_00066469-exon-scaffold_455-1575043694:22261..22958 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_455 | supercontig | scaffold_455:22261..22958 . |
Blast
The following BLAST results are available for this feature:
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