TCONS_00066477 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066477
Unique NameTCONS_00066477
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066477 ID=TCONS_00066477|Name=TCONS_00066477|organism=Clytia hemisphaerica|type=transcript|length=179bp
GTTTCTTTTAGTCTCGATAGGTCATTTTCTTGGATCAATAAATTCGACGG
TGCTCTAGAGGTTATCAAGTCAAGGAAAGGTTGCAAGCAATGACCAGATT
TCACAGACGGACGTGGATTGAGGAAAGATCTAgtttcaatcaccaattcc
gcccttctcctctttttctctatttccta
Run BLAST on NCBI

transcript from alignment at scaffold_455:180307..180485

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066477 ID=TCONS_00066477|Name=TCONS_00066477|organism=Clytia hemisphaerica|type=transcript|length=179bp|location=Sequence derived from alignment at scaffold_455:180307..180485 (Clytia hemisphaerica)
taggaaatagagaaaaagaggagaagggcggaattggtgattgaaacTAG
ATCTTTCCTCAATCCACGTCCGTCTGTGAAATCTGGTCATTGCTTGCAAC
CTTTCCTTGACTTGATAACCTCTAGAGCACCGTCGAATTTATTGATCCAA
GAAAATGACCTATCGAGACTAAAAGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041590XLOC_041590Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066477-exon-scaffold_455-1491911889:180307..180485TCONS_00066477-exon-scaffold_455-1491911889:180307..180485Clytia hemisphaericaexon
TCONS_00066477-exon-scaffold_455-1510915933:180307..180485TCONS_00066477-exon-scaffold_455-1510915933:180307..180485Clytia hemisphaericaexon
TCONS_00066477-exon-scaffold_455-1575043694:180307..180485TCONS_00066477-exon-scaffold_455-1575043694:180307..180485Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:180307..180485 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066477 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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