TCONS_00066508 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066508
Unique NameTCONS_00066508
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length963

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066508 ID=TCONS_00066508|Name=TCONS_00066508|organism=Clytia hemisphaerica|type=transcript|length=963bp
CGATTCGGCATGAAACGTGCGTGTTCGAGAAAGAAAGGTTCGATTGAGCT
TCGATAATTTTTTGATCTAAAGGTTATTTACGTTGTATCTGTTGGTATAA
ACTACATTGTTCTCTTATCTAAAGATTTTCCAAGATGTCTGACCAGGAGG
AgcaacataaacataaacaaaccATTATAAATGTTGACTCCGACGAACCT
TTTGCGTATCGATGTAATGTCTGCGAGCTCGATTTTTCCATAATCGAAGA
GTTACTCGCTCATGTTACAGAATCTCACACGAATCCAAATGGCTCTGTCT
CCTGTACAGATTGCCAAGAAACACTTAGTAATGCTGATGagtACATAGAA
CATCACCATAGCCATCATGGAATTAATTTGAAATCCAACTCAGTTGCTTC
TGTGCCACATACTGAAGAGTCACAAACCTTAGTTCTCAGATCAGAATNCC
TATTATAATGTAAATAtaaactttacttttctttttactttaaaGAGTCA
CAAACCTTGGTTACTCAGATCAGAATCACCCACGCAAACTCATCAAAGAC
TCAAGACTATTTTGATCCATGGAGGTACGGTACAAATAATGCTTCGACGC
ACAaTAAAACTATAAATTCTTGAGAAAACGACAATTAGAAATTACCGCTG
GAGAAAATACTTATTGCACCCTTCATAATCGACACTAACATGCCTTCTGC
TAAATGGATGAGAAAAAAACTTCGAGAGACGATCCCGTCCAGTGCTAAAC
AACAATCTTGTAAATGTTTCGAATTATGGAGGACGTATTTCCTTCAGGGT
ACGGACAAAGATCGGTGGAATGATCAGAACGGAGCCATTGAAAAATACCA
AATGTTGATTGAAGATTTGAAATCTACGTTAGAAACAAGTTTTTCTTGTA
CTGGAGAAAATGTGCGcttaaaacaaaatcaaaaggtaactttcttgatt
ttttgaagaacGA
Run BLAST on NCBI

transcript from alignment at scaffold_456:405549..423132+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066508 ID=TCONS_00066508|Name=TCONS_00066508|organism=Clytia hemisphaerica|type=transcript|length=17584bp|location=Sequence derived from alignment at scaffold_456:405549..423132+ (Clytia hemisphaerica)
CGATTCGGCATGAAACGTGCGTGTTCGAGAAAGAAAGGTTCGATTGAGCT
TCGATAATTTTTTGATCTAAAGGTTATTTACGTTGTATCTGTTGGTATAA
ACTACATTGTTCTCTTATCTAAAGATTTTCCAAGATGTCTGACCAGGAGG
AgcaacataaacataaacaaaccATTATAAATGTTGACTCCGACGAACCT
TTTGCGTATCGATGTAATGTCTGCGAGCTCGATTTTTCCATAATCGAAGA
GTTACTCGCTCATGTTACAGAATCTCACACGAATCCAAATGGCTCTGTCT
CCTGTACAGATTGCCAAGAAACACTTAGTAATGCTGATGGTAAGTTGTTT
TCGTTTTTAAATCTCTCATCGCtgattttgaattcatttttaaaactgTC
TTTTCTATTTAGGAGGATGAGCTTTGGGAAACTTTTGTCACAAAAAAGGC
AAGTTTTTGtggttttgtgacatttttcaaaCCAATGAATACAAAAAATT
AGCCTATATCTTTTTAACAGGGTGGGATTGATCTTTCTTGAAGAATTatc
gtaacttggtctaatattgacatccctcatctaattccgacactcttttt
atcagctgaaattaattgaaaactgtttttctttacttaccgtcaactgc
tctaaacttgggacttgttgatatctggcctgtattttcacttactgtta
aatctctttgacaacaaatttgttttgataactccaccaagtttatcaat
catacttcttcgttcctcttagagtgcacagacagttcagacattcgcgt
gtgttccactacagacttttttcatatttcaatttaaaagcctactcggt
gcgaaagagaaattgtgtattttttattaCGCCGtttattaactcaaatc
aaatatgactttggaggttcggtgaaatagaccttttttcaaagaggacg
tcctgttgaataattatgtagtccagccataaaacaatgatagagccatg
cattattactgtatcatgcatattgtaatatgcataattattacaatatg
catgatacagtaataatacatggttttatcattgtttttctgctggatta
cataattattcaacagggtgtggcctcattgaaaaaaaggtctatggtgg
ccgaattaccgtcccatgttttgtcagatagtcccaagtcagttagtcac
actagcgtcccgccaaaatgtgtatcaaagattaatgctgcgaaagcgct
atatcgtttacttgactctcaaggaTAAAAATGTggcgcaaaacttctaa
agggattcatgaaaaaataacccggcgctttttaatgaaattaacatttt
caaaaactttgagaaattgcctaaaaNaccatagatgaaaaaatttgagc
caagccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagat
ctacgggggaggcggaacccacctagatccgcgcaccaccggataggctg
tttcccggaattttgccggacctcaaataaTGACCCATTCACAtatgcgg
aattgtttttactttagcgtataaaccaggccttaaaaaacaaagcgctg
tctcgggaattgaatgacaaattttggttggttgattttggctgctgcac
gttttattttgttccaaactttcaagttttataattgttttgcgaacttg
attcaggtaactctcatccttgttgtgcaaatacatcctgtagatgactg
atgttgttttttctgaaagctaaatttcctagtgtgactaactgcaagtt
agagcagttgacggtattatAGTGGTGGTCGGTCAGAGAGGAatatatac
cgtgaagtcgggtaacttgcatcagtgaaggctaacatgcatagccctca
aatgaatgacctgtctggtccttaaaatacaaagttaaattaaaacaaaa
atgttaaaatagagctgcgagcgaagctgcgtagtttatttgttttgaaa
ttttgctgctttgattggtcctgattggtcagtcatttgagggctataca
tgttagcctccactgatgtaagttactcttaggtgccaaataaacgcccc
ccccTGCTTGTTAATTTTTCAAAAAATTTTCAAACCCCCGGACGTTATTA
GGACCCCCCCCCCCGTTtattaatttttaagaatattttcagctgtcaaa
gagaaggacccttattttgctctaaatagcctgattttagacTATATTTA
CCGTATTTTgggaagtacaatttccaatccccctgcaattaggtcccccc
catttattaaaatctcgaaaattttccaacaccGTTTATTTGAACCCCCC
CATTtatttatttggcacctaagagtaccctTCAACTTCACGGTAATcct
tttcaatcagtgattcaaactttcatattattcctgtctctaaagaaggg
tgtgagaattagacaagggatgtcgatattagaccaattTACGATACATG
ATGGTGTTAGCTCATTCAGTTAGTCAAACGCACTAGGAAATCAAGGTTGA
AGAGATAACAACATCCGTCATCTACAGgatatattttatttgaaacaact
agggtgagagttacctgaatcaagttgaagatcccaagacaattacCGTC
AACTGTTCTAAcctgggacgattggtcgaaacatgggcctgtttgatatc
tggtctttattttcacttactgttaaatctctttgacaacaaatttgttt
tgataactccaagTTTATcatatcaatcatacttcttcagagtgcacaga
cactcgcgtgtgttccactacagatttttttcacatttcgatttaaaagc
ctactcggtgcgaaagagaaattgtgtattttttaatacgctgttcatta
agtcaaatcaactgactttggaggttctgtgaaatggtggccgaattgcc
gtcccatgatttgtcagatagtcccaagttagagcagttgacggtaagta
aaaattgaaagcttgaaacaaaacataatGACCAATTACTAATGTGCTGT
ATgttattcaattcccaagataGCGCCTCCCCTTGATTGCTCactaaact
aaaaataattccgcacatgtaaatgggtccgTGGATGAgctccggcaaaa
tttccgggaagtaCCCTATCCGAAGATGGGATGATGTAGTTAATACACTA
AAGTTTCATTTCCAAACTTTGCTTTAATAATTTTCGCCTGAAATAAAAAT
CTAGgtcatttttaacaaaaatgttACATTGTTAGCAATctttggcaaaa
cctaaaaatcaaatatctttCAACTCTAGTGCTTTTGGACCTGTATTACC
TTTTTAGCACAAAAATCTATTATAGAAGCTATTTCAGAAGCAGCCATCGC
TCcaatttccccaaaatatctgtttccctttttcaaggagagagcttttt
ttgaaaaatggggaaacagatctaaagaccttttccttaaaactatctgt
ttcccggctccagctgatgacgtcatcaggagatgacataataaattggg
aaaccaGGCAGAACCaggggaaacagatatctgttttcaaaaagatgata
ttcattggaaacagattgaactttccgggggtaaaacaGATATCTAGCGC
TGTGATCCTTGTCCTTAGGGCAAGGCCTATGCCCTATGCTTAGGGTAGGC
TCATTCTTCTTCTATCACAAAAAGCAaaggaaacagatgaaaatttccaa
gagagggaaacagatatcctattCATTATAAGTTtgggagaacagatcaa
aattttaattttgaaaattgtggaaacagatcaaGTTTTCCAGGAAGACT
ATTAtgcctgggaaacagatgtttaaaaaaagatcctCACTGCATGATTT
CGCTTTTTTGAAAGTCATAGAGCTTGCcttttttatgaacatgtcccTCA
AGACTGAGGCCTGGAATAAGAGCCATTTTTGGTTATGTAATTTTTAAGCT
CCTAGGTTTTTTCATTTGATTCTCACAGGCCATAACACATGTCTCAAAGT
CTGATGCGTCGGTGCAAACTATTTTGTCGTGGCCATTCTTGCACAGAAAC
CAGACTCATTGGACATAATAGTATACGCAAAACaatgatataaaaatata
aacacaGACATAAATAGAAATTCTACAACAAAGGTTCCTAGCCTCCAGAC
ATAATTAATTGAACCAATCAAACTTTGTTGTCCAattaatgttcgattaa
gttcggtTGTCGAACTTTAATTAAATACtcatatatttttcaaaatataa
agtttgattaattttgattaaagaaatcgaacttaatcgaacttttaaaa
gacctttaaggtatgtgtacaccctTTATGACACATTCTCTtgaagtata
tattttctgaaagcccttAAAATTTCGTAAGGGATGGTGTTAAAATCTTA
TTTAGTATACTGAGTAAGAGTAACAGACCAAATTTTGACCTAGTTACATT
CAAAAGGGATGAATCCACCCATAGCTTTGAGCTATCGAGATTATCAATTG
TCAAAAATGTCCGTGCTCGCTTCGATcgttatttttaatttcgcctagcg
aaagtattacgatagcctttcgcggcggcggcggtgtaataaaaaaatta
gaaaacgaaagtactcgatacggtggacaaNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
aagaatcaaatcaataactcttgatagactgtgatataccttttggtaat
taattcttacaaagtaaataagggatggcgcacaatatgatcatatttat
ttttctaataagcatatactttataagaatgaaatTAATAACTCTCGATA
AAAGGTGATATAgtcttcggtaattagttcttacgaaGTAATCAAGGGTT
GGCGCgcaatatgaacatatttacattatcggggaaaacttcgtcgggga
aaaatattcgtcatttGCTGGTAGTTGCTAAACGCCTTAAGGCCGGggta
aattttcgtcggggaaaaatattcgtcatttggccaaaatttcgtcactt
ttccccgacgaagttttccctgataaggtttttttttcaataagaatcaa
attaataactctttatagatggtgatatgcccttcagttattagttctta
agaattaaacaaccattgttcGTAAATTGATCTTATCTTTTTAgcgattt
tgagcctcgttgttcatataaaattgtttcatcaaggctcgatgtaaagt
agacttcagattagcttgatcatctctacttcttgttttttcccatgcag
tttaaactttaggcgaaattttcgacttcaagtcgtcttgttttttaatg
tttactTTTCATAGGCGAAAGGGggtgccaaaatcaaaatcttctaaaat
tgcctccccagtttgcctgaattttagtcgacccacGACGCTACTGCTTT
GATGGATACGTCTATATGATGGTAAACGAGTCTGAAATATGTTAGGGGGA
ATCAAATAATAATAGCCGCATTTTTGggcctaccccggtggaggtcctat
aaataaacctgtgtttgttcgtccgttcgtccgtccgttcgttcgtctgt
taccacttttctcaggattgaatcataggaatcttttgatttttggtata
aaggtgcaaaatggtggtggccaaaatgtgacggagcccgatcttcgaaa
aaaaatttttgggcaaattagggccaaaaaacggctaaaaaacgggtttt
ttgtactttgtgaaaaattggatcattaattttttctgaatttttgcatg
aaattaGGGTACCATCCTAGGTAAAAGATGATTttagcagatttttgcaa
aaaaattttgttggctcaaaaaacgcatgtttatctataagaatcactat
taataagcatacatcaatgttcttattcaaattactcaatttttttatga
gatagatgttttttttgcccacgagggcttacttttgaaaaatatgtgtg
tttaaaCATGCAATTttagttgcttggcgtgtttttatagaaaaactggc
caaattagatattttttataagcacattatcaattacttaggtattagct
tttctcgagattagctctttcattttttatgattttttgcacaaagatgc
ataaactataaacccttgaatgtgtcggagcccgattttcgggaaaacaa
attttggtcaaatttgagccaaaaaacggctaaaaaacaggttttttgga
ctttgtgaaaaattcgatcattaattttttctaattttttgcatgaaagt
agggtaccatcataggtaaaagatggttcaagcagatttttgcaaaaaca
ttttgttggctcaaaaaaacgCANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaacgcatgtttatcta
taagaatcactattaataagcatacatcaatgttcttagtcgaattactc
aatttttttatgagatagatgtttttttgctcatgagggctgaATATTTA
GAcacgaaattttggttgcttggcgtgtttttatagaaaaactggctaaa
ttcgatatttttttataagcacattatcaattacttaggtattagctttt
ctcgagattggctctatCATTCTAtatgatttttgcacaaagatgcataa
ttataaaccctcgaatgtgacggaccctgatatttgaaaaaaaatgtttt
tgggtaaatttgggccaaaaaacggctaaaaagggtttttggactttgtg
aaatattggatcattgtttttttctgaatttttgcatgaaagtaagtAAA
AGAtcgctcaagcagatttttgtaaaaaaagaattttttaactcaataaa
cgcatgtttatctataagaatcactattaataaggatacatcaatgttct
tagccaaattactcaattttttgacgagatAGATGTATTtcttgctcacg
aagtcttgaatatgaaagaatatttcaagggcatgaaattttggtttcta
aacgtttttttataagaaacaaacgactaatNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNggtccataaaagtatcacttgtttttcaccgttcaacatataTGGCG
ATGATCAGAGTTCAAAAAAATCACACAATGAATAATGATGATTATCTTGA
CAATTATGATATTTGATCGAAAGTCTTCTACAGACTTTGTAGGAACTTTT
TAAAAGATCTAAAAAATTGTCTTAGGGATTTTGGGAAATTATGGGAAATG
TTTCTCAACTTTGAGCTGTtaaaattaaactttaaaattctctaaacaca
aaaacatgtattttgGTGGTTTTTAGTAATCTGAATCCCTGTATTGGCAT
AGCACCATGAATGGATAATTCACTgataatgttttcttttttcttttaga
gtACATAGAACATCACCATAGCCATCATGGAATTAATTTGAAATCCAACT
CAGTTGCTTCTGTGCCACATACTGAAGGTAAGTGGATGATAATAAGGAAA
TTAAATATGATGTAATTGTGGTTCATGATCAACAAGTCACATGCAAGCTt
taattactctcgggtacctaatagccgcccccccccgctaattaattttt
cgaaaattttccacctaggacattcttattccagcccccctacccccgct
tattaatttttgggaaaatgtttttgaaagttccctcttttgtcctaatt
cagctgtatcagcctccttttcaaaagttttccacctaGGACANNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAAAAATGACAA
TCGACAGGACGAGATTTTACAATACTTGAAGCGCGTTGATGATAAACTAG
ATCTCATTATAAAACATTTCAATGTTCCATTCCATCCGTCTTCGCATGAG
AATACAAACTACAATCTACGTAATGGGCGTTCCTCTATCACTTCAAACGG
GCGCCCCTCGATGGCTTCAACCTCACCAGTGGCCAATCATTCTATACCAT
TCCCAAGAATCAATTTCCAAACAACTAAACCTTCCAGTTCTTCACGAAGT
AACTCGTCCTCTTTTTACACAACTTCTGATAATACAACCACCATACATGG
TGAAAATGGACCGCAAGAAATTACTCAATATGTTATCTCAGATGAACTTT
TAGAGTCAACTTTCTTATCGAGTCGGAATCGAGGAAATTTTGCGAAAAAG
CTTGTCTACGCTGCTTTCCCACTTGAAGAACGACTTGGTCGTAATTGTTA
TGGGCGTAAAGGTGGCTCTTTAAGCGGTCCCAAGGAGCCGCTAGAAGTAG
CCAAACTTGATGCAGTCCGGGAAGCTGTGTTCCGAAAGTTTCCTGTTCCG
GCGTCCGAGGAAGATGCTGTTTGGAAGAAAGATTGTGTCATCGCTATTGA
TTCTGCGTTAAGAGCAGAAATACGACAGCGTCTTCAACAAGATGCGAAAT
GTGACGACGGAGATGACAATTTcgttaaatttttaaaacattgatATCCT
ATGATTCACTATTGTACTCGTGCGGTTTTTAATAAGTTTGTTTGTCCCAG
GGAATATGGATGGAAAAGGAGACGCGATTCATTTATTAATATTACTACAA
CTCACACTTAATATTTTTATTGGGTGACTGGTTGATGATTTATATCAGTG
CagtaactccaaacaaaaataGAAACAGTTGTTATTTAGTATCCTTGATA
CATTTGACTTACTTACTTTAGGCGTGTAAACTCTTATGAAGGGgttttta
ctttaaattatGTGCATCGTAAgagtttttcaactttttttataacttCT
GCTCGTAAAGGTTTTCACGTCTaaagaaatgttttaaatttaaaCTATCT
TACTGTAAATATTCCTTTTTTACTCGCATATTCATATTCATgtttctttt
gataaaatttcacCCAATCTTTTGAAATTGATTTAATAATCTGTTATACT
GGTACTGCTATTTTTTGAATTAGTAGATTAGTTCGGGTTATATTAATTTA
ATATTAGAAATTTTCGCGACCAGAAACTTTCGAAAGAAATCAATATGTAT
TGCTGATTATTATATTCtcgcaaagaaaaaaaatctcgcGAATGGCCCAA
CTCGCGAAATGTTCTGGCCGCGAAAATTTCTAACATTAAATTAGCATATA
AGTAAGTAAAAAGCGGGTGTGTAACGTTTTCTGAAATTAACACGCTGGTT
TTACAGTTTCTATCCAAcgttcttgaaaatttttgttttctctcATAATA
AGAAATCGGATTGACGtccataagaacatccaaatttgaagccttcggat
gttcttgactttttgagttttaagcctaaaaatgttcttaacatgttctt
atttacgccattttttttgagtatttttgtcgattttcttaagaaatcag
ttgttttagagtccacgcacgttcttaacattttggccatggaagccttt
atgttctcatatagtttgttcttttaaaaaaacgtgtatttgcgatttat
tattttttcacctTTAGATATGAACTCATAATTTAAACACGAGGTCCTCT
TACTACACCGTAGTGTATCGCTTGTACATTGAGATCAAGGTAAGTCATTT
AGTTTTAACCAGCGCTGCAAATCCTTTTATGAGTANNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNttagcctgagcagttccttaacaattccttattt
tttggaccattttcagcctcgagttccttataaacgtgttccttataaaa
aaaaaaacgtgtattatgtACTATCGGGTACCTAATACCCgggggtttgg
aaaaaatctcaaaacttgataaaaataaaaatgtcctggctggaaaattt
ttgaaaagaaggctaatacagcagaattaggacaaaagagggaactttca
aaaacattttcccaaaaattaataagggttggaataagaatgtcctgggt
ggaaaattttcaaaaaattaattagcgggagaagggacggctattaagta
cccgagagtaggccAGGCTTGGATAAGTAAGAAACTGTTGATAAACTGTC
ATATAAATCTTTATTGGTTAAGATTCCTGACATGAAAATGTTCGTAAATT
ACTATtcctttgaaatgttttttttttcctatcATAATGTAAATAtaaac
tttacttttctttttactttaaaGAGTCACAAACCTTAGTTCTCAGATCA
GAATNCCTATTATAATGTAAATAtaaactttacttttctttttactttaa
aGAGTCACAAACCTTGGTTACTCAGATCAGAATCACCCACGCAAACTCAT
CAAAGACTCAAGACTATTTTGATCCATGGAGGTACGGTACAAATAATGCT
TCGACGCACAGTATGAAATCTTTTTTAAGAACCAATTTACTTTTGTTGAG
GCCCAgctgttcttctttttttgacacTTTAAACCTCTATTTGTTCTTAT
CCTTTTTTCATTTCTTAGGTAAAATGGGGTTATTTTTATAGGCTTTAAAC
TCGACAATCTTTGCTTTGGCCCTCAATTTACTTGAAAGTCAGCAATTCTA
GGATCAGTactattcttaaattgttctattttttgacgattttgagcCTC
TATGAAATTACTAGCCGGCCCGGCGTCGTTCGAGACGACTCTTTACCATG
ATAATTAAGCTTGCTTCGCTCGCTGCTATTTTTGAGACATTAAAGGGGGT
CCGCATCGaatgtattttttacttttatgagAAATAGGTAACTGTTTCtt
gtattttctaaggaaaaggAACAAAAATACTTTCTTTATTTAAAACATTC
TaatgtatttcccaaggaaataAATGTAGAGAAAATTTCTTACATATTTG
AGGGAAAATTaactaaaaacaaatttgttatattttcaaGAAAGGAATCA
AAGGAAAATcacccaaaataattttcttgaatttggcAAGGAAAAAATCC
TAAAGCAAATTCTTGTACTTTCTAAGGAAAATCGGCCAATACAATTAGac
aatttttatataataattacTGAAGTAATTTTTTCGCTACTTTTACCaag
ttgatttttcaagaaaaatcgcTCTCTGTCTCGAAAAAAGATAAAGAATA
ACTATTTTGAAAGCTcattgaatagaccttttcataaattacgtcacgaa
catcacttacctcgttttgaagttattgccatggtgattaactcccagcg
gattctattaaaactactttctattcataaataaatcatttaatgtctca
tgggacataatcaccatggtaactgtttgaatacgaggcaagtgatgttc
gtgacgtaatttatgaaaaggcctatcgAAACTACCATTTTTAATCTATT
TACAAGGAAAGAAATTTGATCGCAAACTAAGAACAAGCTCGGAACAATCT
CAGTGTAACAGATGGCATAATTGCATTGTCTGTAGATCCTTTAAGTAAAT
AAAGAATACGTATAACAACATGATAAGAACGTTGGAAGTCTAAAAGTTTC
AAttgcacgcttttttttataagaatggtgtaaatccatttcataaTAGA
tagtcttaacttttttgggaaaataatcctaaaatattcttacaacattc
ttaggttaggatcctaattgacaatttataatttaaaatggtctaaaaat
ggcTTTCTTAGCTTAAGTAGCAAAATTCtatatgatggtgatattcttag
catattcttaattttttggccaatttcatcatgcacattcttataaagtg
tattcttataaataaaaaaagcgtgtaaaagtcgacaagaaaccaaaatt
taaaattgcatGGTTCTAACAAAAAAGCGTGTGTTTGCATTGGAATTCAC
ACTTGGAATTCATTTAGTAAAACGATATACAAAACCTACGCTTGGTTGAC
AGTTTATTACTACTGTTTCATTTCAATTCTTATTGATAGAGAAAACGGTC
ACCATAGTTACTCAATacgaataaaaaaacaacacattttaaataaatta
tcatagtgaaataatttttattgaaTTCCCTAATGGGTCGAGAAAACCAT
TTTGAACTGTAGCGCTGTGTTTGAGGTTACCCCTAGTAACCAATAAACAT
TATCACATATATTTATTTTCCTATGATTGTGATGAGACCTTTCAAGGNGT
AAATATTAtcacatttatttattttcctaTGATTGTGATGAGACCTTTCA
AGGAAAAAATCAGTATATAGAACATTGTCTATAACTAGTTTCAGGAGCGG
CTGACGCAGACAgtaaaataaagagaaaaattcatctTTGGCGCaaggtt
tttaatatttttcaaaaaaatactttcGCTACCCACTCCATTAGCTTTTC
TCTTAGATTTTTGGAGAGTTTATTTTTGTGTGTGGTGAATATCTCTAGAT
GAAATGTTACGTTTCAATAGGCTATATTGATGTGATTTATTCCGGTGGAT
GATTGGCTGAATGCCCTGTGGTTTTTTActgtttgttttgatgaattttg
TCGGTACTTTTACTTAggaataaaataatttataaacaTTGTTTTTGGGA
CAACAAACTAATGTAAATTGGGATTTGCGAGTCGGTTATTGGTTGAGTTT
CTCTTCAGGTACGGTTGAGCAatcatgaaattaaaatgataaACTTCATT
ATAGGAGGAGAAAATCGAAATATCTTTTCTGTTAAGTTTTTCTATCGTGG
CTTGAGTTTGCACACCGGATATGGTTTTATACTTTGTATTATGCTTTCGG
TGCGACACATTTTATGACGGTTTTATCCAAGGTTGCTATGCTGTATGTAT
ATTTGTTCGTTCGTGTTCTTTGATGAACTGTGCGACTTcctaaaactttt
gttttgatttctcaTTTTGTTGTTGTAGCTTTTGGCTGGTTATAAAGTGT
CTGCTTACAGAGAAATCAAGATGGTACATGTTCATTTTGCGTTCCCAAAG
TGCATCATTTTTCGTTTATGAATGTTAATCCAATTTGAGTGAGATGATTG
TATTTTcaagtattatttttttattactttttagaTAAAACTATAAATTC
TTGAGAAAACGACAATTAGAAATTACCGCTGGAGAAAATACTTATTGCAC
CCTTCATAATCGACACTAACATGCCTTCTGCTAAATGGATGAGAAAAAAA
CTTCGAGAGACGATCCCGTCCAGTGCTAAACAACAATCTTGTAAATGTTT
CGAATTATGGAGGACGTATTTCCTTCAGGGTACGGACAAAGATCGGTGGA
ATGATCAGAACGGAGCCATTGAAAAATACCAAATGTAAGCCATGCATATC
TCTGTTTATTCTATTTCAATCTTTGCTACCTTCCTACAGTAAgactttac
acgtttttttattagagcaTCAAacgtttttgaagcctttcggatgttct
taacttttctagttttatgcctaaaaatgtttttaacatgttcttatttt
caccattttatgagtatttttatccattttcctaagaaatcgggtgtatg
ttttagagtccgcaaagccttaaaatgttctgaacttgttcttaatattt
tggccatcgaagccttagttcttatatagtttgttcttataaaaaaatgt
gtaccccTTCAGAGCAGGGAACATTTGGACTCGCAATTTTCTTTAACTAA
ATTGTAACTTTTAACTTTAGCTAATTATATTTTCATCAGGTTGATTGAAG
ATTTGAAATCTACGTTAGAAACAAGTTTTTCTTGTACTGGAGAAAATGTG
CGcttaaaacaaaatcaaaaggtaactttcttgattttttgaagaacGAC
AATTTTTATCGATTCGAGGCTCTCCGGCCCTCCCCAGTCTTTTAGAATGC
ACAACgataattatttaaaaatcgTCTTCCAAAATATCCTaatcaatttt
tcagtttttaacaattgctgatttttttatttattttttcaggatACCGT
AAAAAACATCATTCGTTGTTTAACATATCGTATCGATGCCATAAGGGTAA
GAAAATATTGTTTTACGAATACAGCAAGTCTTATCAAGGAGCTAATTGCA
CCcattaaaaaaacatataaattttgagtatttttttcatttttaagtat
agcAGTTACCACCTAGAGATGGAGTCTTTTCCCTCTCAATTTCACACTAG
AAATCGANTGCTACCTTCCTACAGTAAgactttacacgtttttttattag
agcaTCAAacgtttttgaagcctttcggatgttcttaacttttctagttt
tatgcctaaaaatgtttttaacatgttcttattttcaccattttatgagt
atttttatccattttcctaagaaatcgggtgtatgttttagagtccgcaa
agccttaaaatgttctgaacttgttcttaatattttggccatcgaagcct
tagttcttatatagtttgttcttataaaaaaatgtgtaccccTTCAGAGC
AGGGAACATTTGGACTCGCAATTTTCTTTAACTAAATTGTAACTTTTAAC
TTTAGCTAATTATATTTTCATCAGGTTGATTGAAGATTTGAAATCTACGT
TAGAAACAAGTTTTTCTTGTACTGGAGAAAATGTGCGcttaaaacaaaat
caaaaggtaactttcttgattttttgaagaacGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041611XLOC_041611Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066508-exon-scaffold_456-1491911889:405549..405887TCONS_00066508-exon-scaffold_456-1491911889:405549..405887Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1510915933:405549..405887TCONS_00066508-exon-scaffold_456-1510915933:405549..405887Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1575043694:405549..405887TCONS_00066508-exon-scaffold_456-1575043694:405549..405887Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1491911889:414898..414975TCONS_00066508-exon-scaffold_456-1491911889:414898..414975Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1510915933:414898..414975TCONS_00066508-exon-scaffold_456-1510915933:414898..414975Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1575043694:414898..414975TCONS_00066508-exon-scaffold_456-1575043694:414898..414975Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1491911889:418673..418858TCONS_00066508-exon-scaffold_456-1491911889:418673..418858Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1510915933:418673..418858TCONS_00066508-exon-scaffold_456-1510915933:418673..418858Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1575043694:418673..418858TCONS_00066508-exon-scaffold_456-1575043694:418673..418858Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1491911889:421533..421782TCONS_00066508-exon-scaffold_456-1491911889:421533..421782Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1510915933:421533..421782TCONS_00066508-exon-scaffold_456-1510915933:421533..421782Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1575043694:421533..421782TCONS_00066508-exon-scaffold_456-1575043694:421533..421782Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1491911889:423023..423132TCONS_00066508-exon-scaffold_456-1491911889:423023..423132Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1510915933:423023..423132TCONS_00066508-exon-scaffold_456-1510915933:423023..423132Clytia hemisphaericaexon
TCONS_00066508-exon-scaffold_456-1575043694:423023..423132TCONS_00066508-exon-scaffold_456-1575043694:423023..423132Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:405549..423132 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.56269	8.88127	5.52416	3.64513	0	0	0	0	0	0	0	0	0	0.0173147	0	5.07322e-06	0	0	0	0	0	0	15.5385	14.6196	0	0	0	0	2.33409	9.05187
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066508 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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