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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066583 ID=TCONS_00066583|Name=TCONS_00066583|organism=Clytia hemisphaerica|type=transcript|length=2195bp
GGCAGACAAAGCAGTGACACAAAAATCAGAAGTAAAATTTCCAACTATTT
gttttgaagccaaaaagtaaaGCGAAAGAAAAGGAGAAAGGAGGCGGTAT
ATTTCAGTGGGTGTCATCAATGAGTTCTTGATAGTGGCAGGTGGTTATGA
TGGGAACGAACACTTGAAATCTTGTGAAACATACGATCCAGTATCAAACA
TTTGGACCAAACGTGCAAATATGGCTTACAACAGAAGCAGTGCAGGGAGT
TGTGTCTTAAACGGAATGTTTTATGTCTCagGAGGGACTGACGGAACATT
AATCAATCACTCGTGTGAGAAATATGACATTCAGAATGATGAGTGGACAA
CCATCAACTCAATGTTAAGTGTTCGAATGACTCACATGCTTGTTACTGAT
AGCAAAAATCTATTTGCTATTGGTGGAAATGACGGGAGTGGAAGCCTTAA
TAGTGTTGAACAGTACTCACCAGAGAAAGATGAATGGATAGCTAAGAAAC
CTGCTTCTTTGCGACGTTCTCATCTTGGTGCGGCAGTGATGTACACACAT
CTACCTGTACCTCCCGTCCTCAAAGATATTGCAGACTTAGATTTATCTAC
TGATTCTGTATAATGAATTAATTTTTTGGGTTCTTACcgttttgaaattt
cttgagagagaaaaatatttttttttagctaACCACAATGCAAAGCGATT
GCGAATGTAGGTTTTAGCTTGCAAGTAACCGGGCTCCCATCCATCattaa
ttcttttttcagttgattacattttttcaaaactccgAGCATTTCTATTT
TGCAAAGTGATAATATACTGAacgaaaattatttgaaattatattaatta
agtttgaattatttttatactaagaagttttccttttttgataATCATGT
AAATATAAATAATAAtctatttaaaaagtttaatattaaaatattatcat
taTAATGTTTAACATTACTTcatttaggcgagaccaatttaatttgttgt
tctacgggcagattaTCGGGATAATATGGGTCGGTCGCtcgacaaaataa
aaatatattttttgtaattGAGGGTCGGCAAAGTGTCAGATCATTTTTTT
CAGTTGTTCAAAAGTTTAACCCTTCTTTTGATGAAAttcatattttcatt
tgaaGTGCTTGGGATTTGTAATTTTATGCTTGCGAAAGTCTGTGGTAGaa
attttcagcttttcaaCTGTTTTTAATCTTTCGAAAAACCAGTGTGCAAG
ATTAactgtagtggaaattcaatattattattttttcaatatcagcaaaa
atagggtcggttgGGCCTGTAGagcaacaaattaaattggtctcgcctta
ggaGATCCTCGCTTTTATATAGCGCTTTGTTACTATGAATTCCTTTTATA
TNATTTTTTTTAGCTAACCACAATGCAAAGCGATTGCGAATGTAGGTTTT
AGCTTGCAAGTAACCGGGCTCCCATTCATCattaattcttttttcagttg
attacattttttcaaaactccgAGCATTTCTATTTTGCAAAGTGATAATA
TACTGAacgaaaattatttgaaattatattaattaagtttgaattatttt
tatactaagaagttttccttttttgataATCATGTAAATATAAATAATAA
tctatttaaaaagtttaatattaaaatattatcattaTAATGTTTAACAT
TACTTcatttaggcgagaccaatttaatttgttgttctacgggcagatta
TCGGGATAATATGGGTCGGTCGCtcgacaaaataaaaatatattttttgt
aattGAGGGTCGGCAAAGTGTCAGATCATTTTTTTCAGTTGTTCAAAAGT
TTAACCCTTCTTTTGATGAAAttcatattttcatttgaaGTGCTTGGGAT
TTGTAATTTTATGCTTGCGAAAGTCTGTGGTAGaaattttcagcttttca
aCTGTTTTTAATCTTTCGAAAAACCAGTGTGCAAGATTAactgtagtgga
aattcaatattattattttttcaatatcagcaaaaatagggtcggttgGG
CCTGTAGagcaacaaattaaattggtctcgccttaggaGATCCTCGCTTT
AATATAGCGCTTTGTTACTATGAAttccttttatattttttggtattttt
attaaGGGTCAtatctattttttttctatGAGTTTATAAACGTCG Run BLAST on NCBI transcript from alignment at scaffold_456:729914..743391- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066583 ID=TCONS_00066583|Name=TCONS_00066583|organism=Clytia hemisphaerica|type=transcript|length=13478bp|location=Sequence derived from alignment at scaffold_456:729914..743391- (Clytia hemisphaerica)
GGCAGACAAAGCAGTGACACAAAAATCAGAAGTAAAATTTCCAACTATTT
GTTTTGAAGCCAAAAAGTAAAGCGAAAGAAAAGGAGAAAGGAGGTATGAT
AACATAGACAAAATCGTTCTTTACTGAAGTTTCTATTTGATTTGAGTACT
AGAAATCTTGTCCTTTTGTGTTTTGAGATTGTGTTTAATTCAATCAAGAA
AAATTTGTTGCGTTTTCGCAGCAGCCATCATATTCAGCCAATAATGCACT
GACTATGGTTTGGTTTAGCCATCAGACTCATGGTTTCAGGTCAAATCTTT
AGGATTTATGAATCCTGGATTTTTCCTTTTTTTCTGCAGTCCAGCTCCTG
TCTGTCTGTGATTTTGAGCTTGATTTTTTGTAAAAAATTTGCCTTATTGA
GACTTGAGATTACCGTGAAGTTGGGTAGCTAACTTGCATCAGTCAGTTAG
TCACACTAGCGTCCCACCAAAATGCATATCAAAGATTAATGCTGAGAAAG
CGCTATATTGTTTACTTGACAGTTACATCAAAATGCCTCGAAAATGTCAA
TATGAAAATTGCGTAATCAGAGAACGTATGTATGTCTCGCTCATTATAAA
AAGGCCGAAACAAACTTTCAATAATTGGATTGTAACATCGAGAAGTCTCT
TTTGTTAAGTCACCAGGGGGTAAATAAAACAGACCTTGATACATTTATCG
TTCGTTTCAACTTGACGATTTGTTTAAAACTCAGNCAACTGCTTGACTCT
CAAGCAAAAAAATGTGCCGCAAAACTTTTAACCCTATATTCGGACTAGGG
GGGGGCTCTTTCTGTTCGGAGGTCAAACTATTGGTAATAATTCCTGAAAT
AATAGAGCTTTTGGCGTGAAATTTTCTGTAAATTCCTAACTTCTATTTAG
CTTCAAAATAAAAAAAAATTTGACACCTAAATATTTTCACACCTTCAGCA
TGATGACATTTCTAACAGTAAGGTGTCACAAAAATTGACACTTTTCTAAT
ACAAATTTATTTTTGATGTCAAATATATCATCCAAACCATAATTTATTGA
ATATTTAGGATGAAATAAGCATTTTAAACTCAGACAATTTTTTTCTAAAG
CCTTTGTTAGAATACAATAGCTATTTATAAGAACAAAGGAAATTTTCGGT
TTTTGCTCACTTTGGGCATCATGAGTGACGTCATCAAAAAGATTTTTTGT
CAAAATTTACCTTATGTGACAAGGATCTTGTGTGCCAAATTTCATCCAAA
AAGACCCACTTGATCAAAAGTTAAGGGGTGGTACAGGAAAAGCCCCCCCC
CCTAGTTCTGAACCGCCCCTAAAAGCCTAGGTTGAATAGGGTTAAAGGGA
TTCATGAAAAAATATCCCAGCGCTTTTTAATGACATTTTCCAAAACTTTC
AGAAATTGCTTAAAATTTGAGCCATAGACAGTTACATCAAAATGCCTCAA
AAATGTCAATATGAAAATTGCGTAATCAGAGAACGTATGTCTCGCTCATT
ACAAAAAGGCTGAGACAAACTTTCAATAATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGTAAAATTTATGTGATGGGAGTTTGACATAGTAATG
TAATGTTGTTTGGGGAATTATGAAGTTCTCTGGAATTTCGATTGCATTTA
TTCAGGTTGATTTTTAATGAATTCTAATGGTACTTTTTCTAACAAGTTTG
ATTACTCTGTTCTCACACTTATGTCTTTTTTTTTCGCATCCTTTTCCGTG
ATTACTTTTATTTATATTTTAAAAGACAGGTAAGAAGGCATATTGATGTA
ACTGATAGGTGAAAAAATTTGAGCCAAGCCAACCTTGAAAACTAATTTGA
AGATCAACTTCCTAAGTAAAAGATCTACAGGGGAGGCGGAACCCACCTAG
ATCCGCGCACTGCTGGATAGGCTATTTGCCAGAAATTTTGCCGGACCTCA
AACAATGACCCATCTACATGTGCGGAATTATTTTTACTTTAGCGTATAAA
CAAGGCCTTAAAAATCGAAACGCTGTCTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAAATGTTTTAAGAGCAAGGTTTGGTG
GTTTGCGCCCTCATCTGTGAATTTTTTACTTGAGCATAAGCTTTATTACA
ATACAATGCCTTTCCCTGTTAATCTACGATTCTTTTGTTTCGTTTAAGCA
GAAATGAAAAGAAATTATGAACGCTGACATCATTTTCTAACTTCTCATTA
CAAATGTTCTAAATAATCTGACTTGCCATTCTCTTTCATCTGCTATCATT
GTCTATTTTTTATCTATCAATTTTTGGAAGATCTCAAGATGAGTTTTTTT
ACAGTGCCGTAGGAAGCAATTTCATATTGGGAGGGAGGGCTGAAGTTTAG
TGACACCGCAAGGGCCATTCATGGTTTGGCCTGACGGGAAAATTTTGAAA
ATTTGATCTCTAGATTGCTTGAAAATGCACTCAGAATAAAATACTTTCAA
GAACAAATTAAAAATTATAAAAGAAAAACTTTGCATTTTGCAAAATAACC
GTTTTTGAAAAAATTATTGGGGGGGGCATAGCCCATAGCCCCCCTTGCCC
CCCAAGTTGCAACGGCACTGTAGGTAGCTAGCCTTTTGTTAAAACAGTAG
CGATATCCTTTCTTTTGTTGCTTTGAATAAAATCAGTCAATATTTCTCAG
CCTACATCTCAAATTTGTCCCCAATTTTCTAATTCAAGTTGCCTTTTGTT
AAGATTTTTGAGAATCTAAGTTAGCAGTAAATGTGCCTAATTATTTATTT
TGATAAGTTGATGGTATCCTATAGTTTGTTTTTGAGGCTCAACTATTATG
ACTAGTTTTATTTTGTTTGTGTATTAGGACACATTGGTCTCCAAACCTGT
CGTCTCTTTTTTATCTTTTCAATTTTTGGAAGATCTAAAGATGAGTTTTT
TGGTAACTAGCCTTCTGTTGAAATATATTTTGTTACTTTGAATAAAATCN
NNNNNNNNCCCCCCAAGTTGCAACGGCACTGTAGGTAGCTAGCCTTTTGT
TAAAACAGTAGCGATATCCTTTCTTTTGTTGCTTTGAATAAAATCAGTCA
ATATTTCTCAGCCTACATCTTAAATTTGTCCCCAATTTTCTAATTCAAGT
TGCCTTTTGTTAAGATTTTTGAGAATCTAAGTTAGCAGTAAATGTGCCTA
ATTATTTATATTGATAAGTTGATGGTATCCTATAGTTTGTTTTTGAGGCT
CAACTATTATGACTAGTTTTATTTTGTTTGTGTATTAGGACACATTGGTC
TCCAAACCTGTCGTCTCTTTTTTATCTTTTCAATTTTTGGAAGATCTAAA
GATGAGTTTTTTGGTAACTAGCCTTCTGTTGAAATATCTTTTGTTACTTT
GAATAAAATCAGTCTATGTTCCTCAGATTACATTTCAAATTTGTCCCCAG
TTTTTCTAATTCAAGATGCCTTTTTTAATATTTTTGATCTTCTAAGTTAG
CAGTAAGTATGACTGGTGATTTAGCTATAATGAGAGAATTTCTTTTAGAA
CGAACAGGAACGAATAATACATATAAACTAACTACATAAAGTAGTTTTAT
TTTTGTTACATTATTTCAGTCTTCCTGTGGGTGATTTTTTCTCGGTAGAA
CATTTTTCTGATTGCTGACTTCAGGTCAATTTTAGAAATTTATTTCTTAA
ATTTTCCTAAAATCCTCCTAAAATTTGTCCTAAAATTGTCCTAAAATATG
ACCAAAATCCTCCTAAAATTTGTCCTAAAATTTAGATATTCAGGCGTGGG
ATCCCTGCAATCTGCATAATTTATGCAAAATTATAGCAATTTTTTACCAC
AAAAACGCCCATAACTTTTGATCTAGGAAAGTTGAGACTTTGATTTAATA
CATTTTTTTGCTCAGTTGGAAGAGCTCTATCACGCGGTATAGGTCTTTTT
TGATTTTGAACACCCCCCAAAAATCACAAATTTTCAGGGCTTACAATTTT
GCCTGAAATCGCAAAAAATCGCAAATTACGCAAAAACTGCGGGTTTTCAA
GCTTGGTAACATTCAAATTCCGAATCAGCACCCTCAAATTGAGTAAGAAA
CATATCAAAAAGTTGGTCCCAGACATTTTGAATTTTTTCTTTATTTTTGA
AACATTAACAATCCACTGGCCACGGCCTATTTTAATTAATATTGTCTTGC
AAACTTGATTCAGGTAACTCTCATCCTTGTTGTTGAAATGTATCCTGCAG
ATGACTGATGTTGTTTTTTCTGAAAGCTTAATTTCCTAGTGTGAATAACT
GTCAGTGGAGGCAAACATGCATAGCCCTCAAATGAATGACCATTATTATT
ATTATTATTAATTTATTTGGTAAAAGAAGATCTAAGTTTTGTAAACCATA
TACAATGCAGTAAAATACTGATGTGGACCTTTTAAAATTGTAAAATAAAA
TATAAGATAGTTTTGAAAATATAAATAAGTGAGACTTGTCAGTAAAGACT
TAAGGGCCATCAATTTTCGATTTTAGAATTTTCTAACGGCATTTGGCCGT
TAAGGGGGGGAGGGGGTCGAATCCAACGCAATCGACCGATTGAAATTCGA
TTGTCGAACACAATAGAATCTCGTTAATTTAAGGTGCACCATAAATTTAA
GATTAAGGTGCACCATAAATTGACGAGTCAATTAACTCGTCAGTTTAAGG
TGCACCATAAATTGACAAGTTGATTAACTCGTGAGATTAGAGTGCACCAT
AAATTGACGAGTTAATTAACTCGTAAGATTATGGTGCACCATAAATTGTG
ACGTCATAATTTCCCATTGATGACGTCACATTTAAAGTAACTCGTGTTTT
TTGTAACTCCTGTTTTTTAACTCGTGTTTTTTAAGTCGTGTTTTCCGAGC
CTCCGTTTATTCCATACAAATGTTACTTTCCATATTTCTTTTCCTCCTTT
TATCAACTAAGATCTGCTAAAGTCGCATACCTAAAGTATTCACTTCGTTA
TTTTTTAGAATAATTTTAACCAAAACAAACGACCCAATGTTTATGTCTCG
TGTTCCTTTTGTTTAGACGGTCCGCGCGGCCCTTGAATTTCGCAGACGGT
CGGTCTTTTTTCTTTGAAATGCCGCTATTCTTTTGATTAGATTATGGAGA
TAATTAATTTGCGCAACTTTCGGAAAAAAGTTTAGAAATTATCTCCGTTA
AATTTTTAAAATGTAAACTGAGCGAAGCCGTAGCGAAATTAAAGACGAAA
CAACAATGAAAGTGAAGGAGAAAATTTAGAGTTTCATCGATTTTTTGACA
ATTTTTTAACTTTAGAGAATTTGATGGCCGTTAAGGTCGAGGGGGGAGGG
GTCAGAGCCTTAACGCCAATTACCATTAAAAAATTCGAAAATCGAAAGTC
GATGGCCCCTTAAACTTGTATATCAAGATTACGGGATTTCGAGTATGGGT
GCCGATTTTACTTTCGCTTTGAGTGGTTTCATTTTCGATTTCAAGCCAAC
ATCATAGCAACAGGGTGCTTGCCCATAGTTACAGAGGTTTGTGCAAAAAA
CTAAAACATAGAAAACTTTCCAAATCCCCCATTTTGATTAATGCAATTAA
AAATGAAACTCTTCTATTTTTCACTTTTTTGCACCTATTCTGATAATTAT
TTTAAGATTTTAAGTTCTTCTTTTATTCAATGATTTTCTTCGGCACTTTG
TCGACAATCTAACTCTCGCATCAAATTCCGGCTTTCTTCAGTAAATTGAA
GATTAGAAGAAACCTAAGCTACGGATCATGGATTGAAACAAATGTATGAA
GGGTGAGATTTTACAGCCGCCCGTGTTGCAAGGCACTAGTATAGTGGACA
TCAACCTTGATTCCTGTACAGGCGACCAAGGTTCGATTCCCACTCACAAC
GGTTCACTTGGCAAGTGAACAAACCTTCTCCCGGGTCAACCCATGTCATG
TGAGGGGAATTGGGTAGTCAGTTCAAGGTGCTGACGGGATGCTTACTCAA
AGCATCTATCAGTTACATCAATATGCCAAAAACATTTTGTTCAACCACCT
TCACTTCAAGATAGGCCACCATAGAACAACGACTTAATAAAATAGATAGA
CCAAGAACTTCATACAATGGCTCTTAGAAATCTTTTGTTTTCTATTCATT
TTGTATTCTTTCATCTTGCCGTCTTTCCGNACTGGTCTATCTATTTTATT
AGGTCGTTGCATAGAATGAGCTTCTTTTTATAGGATGAACCATATTCATG
TGGCTTTCAGCCTTGCACAAACAGCCTCAATGTTTCTTAAGAAATTGGGC
TTTTGAGCCTTAAATGTTTAACTTACATGTTTCTAAGCTTGACATAATCA
GATTATTTTCATGTAAAGAAAAAAAACATATGTTTTGATTGAAAGGTTCT
TAAAAAAACCGAAATTAAAAAATTTTATTTTCTCATTCTCAGCTTCAGCA
TGTTTCTTAGATGTTTCTTAGTTTTTGGGCATTCTGAGCCTCATGTTTCT
TAAAAGTGTGTTTCTTAAAGAAAAACGTGTAGTCATCTTGTTAGATATTT
TGTTTTAAGAGTCCTTGCAATAGTTTATTGTAGGTTTTAGCACACTTAAA
TTTAATTACCATTGGCCATCATGGCCTATCTAAACCTTATTTTTCTGATA
CTTTGCACATGTTAAAATGGTAATGTTTTTTATTTGTTGAACTCCTATTT
TCAAATAAATAATTGTTTAATGCAAATTTTGGCCAAAAGTTCCCTACAAT
GGGGTGTTATTGATGTTTTGCTTAAATTTCTCCATTAGTTTTTTCTGATT
TTTTGCTTAAGGACAGAGGGCAAGGTTCTCTAAAAAGTAACTGAAAAAAA
AAATTGACAATAAAAATCTGATTTTTGTATTTGGAGAAAACTCTCTTTTG
TCATTTTTAGGGATAATGAGCATTTAATTAGGGATTGACTTGGTATTTTT
GGAATGATGCGAAATAGTAATCCTCAAAATGTGATATTCAGTTTCCGGCC
TTTTTTCAAAATTACTTTCATTAGATATTTTGGTCCATGCAGCATGTAGC
TTGTTTATCTTGGAATTTCGTACAGTTTCGTACACAATTTATAATACTCT
ATAGATTCTCTCATCAAACATGTTCGAATATCCTTATTTTGGATTTATGA
ATGAATAATGGAATATTGCATTTACTTACTTGTCTAGATTGTCAGCTGGT
GTGTAATTGCTTTGGTATTGTCTTAAGGGCATGTCCTTGTCTTTCACATT
TTTGGGACAAGATGGAGTTTTTACAAGCTCTTTTTTGATTTGGTTGGTCG
TTAACCAGTAATAAAACAATTTTATTAATTTTCTAAAGAAGGCGTAATTT
TTATTACTTCAAAAATGACCAATTATTAATTATTAAAACCCCATCTCATC
TGACATTTTGTAAATGTAGGTCAGTACAGTATTACCTTTGATTCAGGATT
TGTCAGTTCCATTTTGTGAATAATAGCACATGTTCAGATTTCCTTTGTAA
GATGTATATTGAAAGTTTATACATCTCTAGATACATAAATTCGTTTATAT
TTCTGAATTAGTTGACAAGATTCATGCTCAATATTTTAGTCTCCTCATTG
ACGGCAACTGGTTATTTTGGTCTCTTGTTATATATTAGATTCATTTCATA
TAAAGATGTCAGAAAGTAGCAATAAAGATGGAGAAGAGGATAGAAATCCT
TTATATAATTTTGAATGCCAACTCCATCCTACAAATTCCTTCAAAAATTT
AAACAAATATCGTCAAAATGGAACTTTATGTGATGTCACCATCAAGGTCA
AAGAAGAGCTTTTTCATGTACACAAAGTTGTTTTGTCCAGTGCAAGTAAT
TATTTCCAAGCAATGTTCACGTCAGGGTTACGAGAAGGAACAGCTGAGCT
GGTTGAATTACATGAAGCTGATCCTATGTCAATCTCTATTTTGTTGGATT
TTATTTACACTTCAAAAATTGAAATTGTCAATGAAAATGTACAGAGATTA
TTACCAGCATCTAAATTATTTCAATTAGACACTGTCACAGATGCTTGCTG
TAATTTTCTTCAACAGCAGCTTGACCCTTGTAATGCTTTGGGAATTCTTA
TGTTTGCTGAAGATCACAGTTGTCAACAACTTGTGAACCATACTGCAACT
TATGTCATGCAAAATTTCTTACAAATTGTATGCATGGAAGAATTCTTAAC
ATTATCATTTGAGAGAATGAAATTTTTCTTATCAAGTGACACTCTAATGA
TTGGAGAAGAGGAAGATGCTTACAATGCTGTCATAAGGTGGATCAAATCA
GATAGTGGGAATCGGAAAAAATATTTACACGATCTTATGAATTGTGTAAG
ACTTCCTTTACTGAGACGGGATTTCTTGATGCTTACTGTTGAACCTGAAG
AGTTGATCAAACAGGATTCAAAATGTAAAGACTTATTGATTGAAGCAATG
AAGTATCATTTGATGCCAGAAATGAGAAGGTATCTGCAAAAGAAACGAAC
TAAATATCGCTGCTCTGAAGGAACTGAGCCTTTATTTTTCGTTGTCGGTG
GTCAAAGTTTATTTTCTTATCACTCCGATTGTGAGATTTATTGCCCTAAC
ACAGAACGATGGTATTCTATTCAACCAATGACAATGCGACGATCAAGAGT
CGGAATTGGAGTTGTTTATGATAAATTATATGTTGTCGGTGGGTTTGATG
GAAGTCAAGATCTAGCTTCTGTTGAAGTGTGTAATGGTAATACTAAACAA
TGGTCTAGTGGATTACAAATGGGAACACAGCGTAGTTGTCTTGGTGTTGC
AGTCTTGCATAATTTGTTATACGCCATTGGTGGTTTTGATGGCTCGTCTT
GTTTAAAAAGTATGGAAAGATTTGATCCACTATCAAACCAATGGATGTCT
GTTGCTATGATGCATCATAAAAGGTAAAGAGTTCATAACGGTAATCTTTT
ACAATCATCGTTGTCCTAAGTTTCATTCTTTAGAGATCCCGGATATTGCT
TAAAAACTGTGAAGCTTAGGTAGTGGTCACTCTCTGGATATCTGTTTTAA
AACCTAAATAAATGAGTTATCCATCATATTTTTTTGGCTATTATACTCTA
TCATATTGTTTTTCTGATATTACAATATTATTTTGTGAAATTTGCTGTTG
TATTTTTCATACCTTTATATATAGAGCCTTGACACTTGAGTTGGAAATAA
ATTACTAATGATAGAATTATCATGACAAAATTTTATCTTGACAGAATTGT
TGCTAAAAGACTTTATACTTGGCTGTTCCATTAAAAGCCTTTTTGAACAA
GGGGGTGGATGAAGCTTTTTAAGTCAAAAGAAAATTATTGAAAATGTGTG
GATACTCCCTGGAAAACGGCAAAATTTGCAATAATATAATACCCTTGGAA
AAATTCTTTTCAAACCTTAAATAAGTTAGGTTGGACAAACTAAAAATCAG
TGGAATGTTAGAATAACTTTTTATCCCTTTGGAAAAATGAAAAAAATATC
CCCTGGAAACTTTACTTCGGATTACCCTCTAGAAATTTTCGTCCACCCCC
CTGTATGGATATAAAATAGAATGGCCCATTAGCTTATCTTGAAAAGACGA
AACCACAAAAAAATACCAATCATGATCTTCAATTTTGTATTTCAGGCGGT
ATATTTCAGTGGGTGTCATCAATGAGTTCTTGATAGTGGCAGGTGGTTAT
GATGGGAACGAACACTTGAAATCTTGTGAAACATACGATCCAGTATCAAA
CATTTGGACCAAACGTGCAAATATGGCTTACAACAGAAGCAGTGCAGGGA
GTTGTGTCTTAAACGGAATGTTTTATGTCTCAGGTAATTTTTTTATTATT
TATTTTGGTACCTCATTTCTCTTAATGGTGATCAGGTCTGATTACTTCGA
ATTTAGAGGGACAAGCTGGAGTTTTTACAAGCTCTCGTTTGATTTGGTTG
GTCGTTAACCTGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACGCGT
CATCTCTATTACTTCAAATAACCAATTAGTGAAGTCTGTTGTAAAAACTC
AAGCCCATCCCAATTTAGACGATGCTATCGTCCGTGTAATATGTTATTAT
GATATCACGATATAACATAGTTGTATATTATAAAACGTAATATGTTGCAC
GGCGAAAAATAGAGTCTGTGTTTACATTCACAAGACATTGAGCCCATCCG
ACTATTTTTGTTCGTACAAAATTACCACCCGACTGCTAATTTGCGAGTTT
GAGGTTATTCTTTATTATTTGTCTTAGACTATAGGATAGTCTACTTTGAA
TCAAAGCCTTCGCGAAGTCCGAAGGAGGTGTTTATTCGAAATAGTACTGT
CTCTATCTATTGCTCAACGGGATAATTTTTATTTCAATTATGCGGATCAA
TTAATGATAAAACAGTGTTCTACACCGTATCCAATCAGTGTGAAGTGGAT
AAAGTTGGCTTCGATTTTTAGTTATATATACGTATTGTGTACAAAATTTG
TACTGAATAAATAAAGTTATCATGGGATTGCCAGAATGTTTGACTCCCAA
ATCATTTTCTAGTAATAGATCATACGTTAGATAGTTGATCCAATAATACA
ACAGTTTGAAGATTGATCCACCCTAGAGGCTGTTCATTAAATTTGAGGGC
CATTCCAAGAAATTGTCAACCAGGATAAGAGATTGAATTGCGTCTATTAC
GAGTGCTAAACGGTGCATGGGTCGCCTAGGTCCCTGTGAGCGTGACATAG
CGCACCCCTTCCTCAGGAATAGCCGTTGAGGGTTTTTTTGATTTTTCGAT
TTCTTATCACACAGGAGGGACTGACGGAACATTAATCAATCACTCGTGTG
AGAAATATGACATTCAGAATGATGAGTGGACAACCATCAACTCAATGTTA
AGTGTTCGAATGACTCACATGCTTGTTACTGATAGCAAAAATCTATTTGC
TATTGGTGGAAATGACGGGAGTGGAAGCCTTAATAGTGTTGAACAGTACT
CACCAGAGAAAGATGAATGGATAGCTAAGAAACCTGCTTCTTTGCGACGT
TCTCATCTTGGTGCGGCAGTGATGTACACACATCTACCTGTACCTCCCGT
CCTCAAAGATATTGCAGACTTAGATTTATCTACTGATTCTGTATAATGAA
TTAATTTTTTGGGTTCTTACCGTTTTGAAATTTCTTGAGAGAGAAAAATA
TTTTTTTTTAGCTAACCACAATGCAAAGCGATTGCGAATGTAGGTTTTAG
CTTGCAAGTAACCGGGCTCCCATCCATCATTAATTCTTTTTTCAGTTGAT
TACATTTTTTCAAAACTCCGAGCATTTCTATTTTGCAAAGTGATAATATA
CTGAACGAAAATTATTTGAAATTATATTAATTAAGTTTGAATTATTTTTA
TACTAAGAAGTTTTCCTTTTTTGATAATCATGTAAATATAAATAATAATC
TATTTAAAAAGTTTAATATTAAAATATTATCATTATAATGTTTAACATTA
CTTCATTTAGGCGAGACCAATTTAATTTGTTGTTCTACGGGCAGATTATC
GGGATAATATGGGTCGGTCGCTCGACAAAATAAAAATATATTTTTTGTAA
TTGAGGGTCGGCAAAGTGTCAGATCATTTTTTTCAGTTGTTCAAAAGTTT
AACCCTTCTTTTGATGAAATTCATATTTTCATTTGAAGTGCTTGGGATTT
GTAATTTTATGCTTGCGAAAGTCTGTGGTAGAAATTTTCAGCTTTTCAAC
TGTTTTTAATCTTTCGAAAAACCAGTGTGCAAGATTAACTGTAGTGGAAA
TTCAATATTATTATTTTTTCAATATCAGCAAAAATAGGGTCGGTTGGGCC
TGTAGAGCAACAAATTAAATTGGTCTCGCCTTAGGAGATCCTCGCTTTTA
TATAGCGCTTTGTTACTATGAATTCCTTTTATATNATTTTTTTTAGCTAA
CCACAATGCAAAGCGATTGCGAATGTAGGTTTTAGCTTGCAAGTAACCGG
GCTCCCATTCATCATTAATTCTTTTTTCAGTTGATTACATTTTTTCAAAA
CTCCGAGCATTTCTATTTTGCAAAGTGATAATATACTGAACGAAAATTAT
TTGAAATTATATTAATTAAGTTTGAATTATTTTTATACTAAGAAGTTTTC
CTTTTTTGATAATCATGTAAATATAAATAATAATCTATTTAAAAAGTTTA
ATATTAAAATATTATCATTATAATGTTTAACATTACTTCATTTAGGCGAG
ACCAATTTAATTTGTTGTTCTACGGGCAGATTATCGGGATAATATGGGTC
GGTCGCTCGACAAAATAAAAATATATTTTTTGTAATTGAGGGTCGGCAAA
GTGTCAGATCATTTTTTTCAGTTGTTCAAAAGTTTAACCCTTCTTTTGAT
GAAATTCATATTTTCATTTGAAGTGCTTGGGATTTGTAATTTTATGCTTG
CGAAAGTCTGTGGTAGAAATTTTCAGCTTTTCAACTGTTTTTAATCTTTC
GAAAAACCAGTGTGCAAGATTAACTGTAGTGGAAATTCAATATTATTATT
TTTTCAATATCAGCAAAAATAGGGTCGGTTGGGCCTGTAGAGCAACAAAT
TAAATTGGTCTCGCCTTAGGAGATCCTCGCTTTAATATAGCGCTTTGTTA
CTATGAATTCCTTTTATATTTTTTGGTATTTTTATTAAGGGTCATATCTA
TTTTTTTTCTATGAGTTTATAAACGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066583-exon-scaffold_456-1575043694:743299..743391 | TCONS_00066583-exon-scaffold_456-1575043694:743299..743391 | Clytia hemisphaerica | exon |
| TCONS_00066583-exon-scaffold_456-1575043694:732809..732996 | TCONS_00066583-exon-scaffold_456-1575043694:732809..732996 | Clytia hemisphaerica | exon |
| TCONS_00066583-exon-scaffold_456-1575043694:729914..731827 | TCONS_00066583-exon-scaffold_456-1575043694:729914..731827 | Clytia hemisphaerica | exon |
| TCONS_00066583-exon-scaffold_456-1510915933:743299..743391 | TCONS_00066583-exon-scaffold_456-1510915933:743299..743391 | Clytia hemisphaerica | exon |
| TCONS_00066583-exon-scaffold_456-1510915933:732809..732996 | TCONS_00066583-exon-scaffold_456-1510915933:732809..732996 | Clytia hemisphaerica | exon |
| TCONS_00066583-exon-scaffold_456-1510915933:729914..731827 | TCONS_00066583-exon-scaffold_456-1510915933:729914..731827 | Clytia hemisphaerica | exon |
| TCONS_00066583-exon-scaffold_456-1491911889:743299..743391 | TCONS_00066583-exon-scaffold_456-1491911889:743299..743391 | Clytia hemisphaerica | exon |
| TCONS_00066583-exon-scaffold_456-1491911889:732809..732996 | TCONS_00066583-exon-scaffold_456-1491911889:732809..732996 | Clytia hemisphaerica | exon |
| TCONS_00066583-exon-scaffold_456-1491911889:729914..731827 | TCONS_00066583-exon-scaffold_456-1491911889:729914..731827 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_456 | supercontig | scaffold_456:729914..743391 - |
Blast
BLAST of TCONS_00066583 vs. Swiss-Prot (Human)
Match: KLH17 (Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.368e-31 Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 2
Query: 98 YISVGVINEFLIVAGGYDGNEHLKSCETYDPVSNIWTKRANMAYNRSSAGSCVLNGMFYVSGGTDGTLINHSCEKYDIQNDEWTTINSMLSVRMTHMLVTDSKNLFAIGGNDGSGSLNSVEQYSPEKDEWIAKKPASLRRSHLGAAVMYTHLPVPP 565
Y+ V ++ L GGYD + HL + E Y+P N+W+ A+M RSSAG VL G YV+GG DGT +S E+Y + W ++ M R TH LV L+A+GGNDGS SLNS+E+Y+P ++W+A RRS +G AV+ L PP
Sbjct: 475 YVRVATLDGNLYAVGGYDSSSHLATVEKYEPQVNVWSPVASMLSRRSSAGVAVLEGALYVAGGNDGTSCLNSVERYSPKAGAWESVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVLEL-LNFPP 629 HSP 2 Score: 106.686 bits (265), Expect = 8.067e-24 Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 2
Query: 101 ISVGVINEFLIVAGGYDGNEHLKSCETYDPVSNIWTKRANMAYNRSSAGSCVLNGMFYVSGGTDGTLINHSCEKYDIQNDEWTTINSMLSVRMTHMLVTDSKNLFAIGGNDGSGSLNSVEQYSPEKDEWIAKKPASLRRSHLGAAVM 541
+ V + L GGYDG L + E+YDPV+N W +M RS G L+G+ Y +GG DG +S E+YD WT++ +M + R + T NL+A+GG D S L +VE+Y P+ + W RRS G AV+
Sbjct: 382 VGVAAVGNRLYAVGGYDGTSDLATVESYDPVTNTWQPEVSMGTRRSCLGVAALHGLLYSAGGYDGASCLNSAERYDPLTGTWTSVAAMSTRRRYVRVATLDGNLYAVGGYDSSSHLATVEKYEPQVNVWSPVASMLSRRSSAGVAVL 528 HSP 3 Score: 103.219 bits (256), Expect = 9.546e-23 Identity = 54/140 (38.57%), Postives = 76/140 (54.29%), Query Frame = 2
Query: 101 ISVGVINEFLIVAGGYDGNEHLKSCETYDPVSNIWTKRANMAYNRSSAGSCVLNGMFYVSGGTDGTLINHSCEKYDIQNDEWTTINSMLSVRMTHMLVTDSKNLFAIGGNDGSGSLNSVEQYSPEKDEWIAKKPASLRRS 520
+ V ++ L AGGYDG L S E YDP++ WT A M+ R L+G Y GG D + + EKY+ Q + W+ + SMLS R + + L+ GGNDG+ LNSVE+YSP+ W + P ++RRS
Sbjct: 429 LGVAALHGLLYSAGGYDGASCLNSAERYDPLTGTWTSVAAMSTRRRYVRVATLDGNLYAVGGYDSSSHLATVEKYEPQVNVWSPVASMLSRRSSAGVAVLEGALYVAGGNDGTSCLNSVERYSPKAGAWESVAPMNIRRS 568
The following BLAST results are available for this feature:
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