TCONS_00066591 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066591
Unique NameTCONS_00066591
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1642

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066591 ID=TCONS_00066591|Name=TCONS_00066591|organism=Clytia hemisphaerica|type=transcript|length=1642bp
atttcattttcagtgaaAATGCAATGAAATCAATAGAAAACCGATAAACT
ATTTCAGGCATTATGTCTTCTGAAGAGTATGAAAATTGCTTGGATGAATT
CCGCACTTACTATGATCAATTGAAGAGTGTAGTAAAAAACAAATTACCTA
AATTGACTGGTGaaatcagaaaaagaGAATTGAGGAATGCTGATAGACTC
TTGGAAGATGCTGAAGCTCAGCTCACACAAATGTTCGAAGAAGCCCAGTC
AGCCCCTGGTGCTTACAGAACCTCTCTACTTTCACAGACAAGAGGTCATA
AAAGCGATCTTGAGAAGCTGAAGCGAGAACTTATCACGGCTAAATCAACA
TCAGTCCAGTCAAGCAGCAGCGGTAGTAGAGATGATCTTCTTGGCTATGG
TGGCACTTCAGCTACCTCTAATTTTGAATCACAGCAGCGTGGTATGATGC
AAGAAGGTTTGGACATTATGAACCGGACAAGCGATAGTGTTGCACGATCG
CAAAGGATAGCTGCTGAAACAGACGAATATGGTGTGCAGATATTGGCAGA
CTTGGATGATCAAAAGGAATCACTAATCAGAGTGCGGGACAAGGTTAAAC
AAACTGATTCGGACTTGACAAAAAGTCGAAGGATAATTCAGTCCATTGGA
GTAAGGATGATTACAAACAAGCTGTTACTCATTGTCATCATTGTTTTAGA
AGTCATCATTTTGGGTGCCGTTGTTTACATCAAGTACTTCAAAAAGTAAT
TCTGTCCAGTGGCTAAATGTTATGCTCGGTAATTCATTGATTGACTGAAT
CAGGCAGATAATAAAGAGTAGGGATGTACTGTATGTACTGCTTGTGAGAG
CTGGTGATGGCGGCGGTCCCTCTAAAAAACAAGCTAAAAATTCACCAAAC
AGTACACGCTAATTTTAGGACTATctcgtttttttcttcattttttgttt
ctttttttaaaagggTTTCATGATAATTTATTGGTTTTTTAAGCCTTGAG
GAGGGGGTTGAAATCACTATTTTCTAGGccatttataaaattgttgttCT
TGGTGTGTTCTAAGTTTCTGCCATGTGGCAGAGTTTCGCATTTTTATAAG
TGTGTCTTGTGTGCGTGTCTTGGTCGGTGATTCatcttttttctcaaaga
aaattattttttgaggtAGCTGATCGCGGAAAATAACTTTTGGAGTGATT
ATTTATATTAAAAGCGGTTTTAAACTTCAGTTAAATTAATTCCGAGGTTA
ACTCCTTATACGATATAATATTCGAACAATTTTCGAGTAGAATTTTTTAT
GATAttgatttttatatttctttacaggaaaaacattaaaactaTTAACT
AGCTCAGTCAAagatattttttaagaaaagacAGTCTCGTCAAATATTAA
AAATGCAATCATTTGCGGAATTGTGACATTTTCTTATACTAAAATTAGCT
AGTTTGGCATTTTTCCTGGATTGTTCTCCTAATGAAACTAGGAAACCTTG
TATCTAAtgaattttttgaataattatgttAGTGTTAAATTtagtataaa
tattttttgttcagtaTTAAAGATTTTGGATCCATTTAAAGTATCCCAAA
TTCGAAAGGTAAATAGAAATTGCAAATTTCAATCCAAAAGCT
Run BLAST on NCBI

transcript from alignment at scaffold_456:881096..889429-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066591 ID=TCONS_00066591|Name=TCONS_00066591|organism=Clytia hemisphaerica|type=transcript|length=8334bp|location=Sequence derived from alignment at scaffold_456:881096..889429- (Clytia hemisphaerica)
ATTTCATTTTCAGTGAAAATGCAATGAAATCAATAGAAAACCGATAAACT
ATTTCAGGCATTATGTCTTCTGAAGAGTATGAAAATTGCTTGGATGAATT
CCGCACTTACTATGATCAATTGAAGAGTGTAGTAAAAAACAAATTACCTA
AATTGACTGGTGGTAAGTGAAAAAATATCATTATACGTTATAACGGATCT
GAAAACTTTCTTTCCATGTCACTGGGTGACGAAATGAAATTGGACAGTTG
TATTTTGTCTATTATTTTTAGGGCTGGGTAGCTTCAAAAAGCGCAAAAAC
TGGACAAAATAGCTGTTTCTGGCTGAAAAACACGGTTTTCAAGGGTTAAT
ATCTCGAGTTAGGTACAGAAATCACCTATANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACATAGTAATTTCGAT
TCCCCTACCCCTTAGCTTTCCAAAAATGCATAACAAGTGCTTCTAACAAA
ACAGTCATGCGATTTTACAAAATGCCCTCTACTATATCATGAAAAAAAAT
TATCAATGAAAAGTATAAATTTCTTGTTGTTATTCCTTATTTTTATAAAG
TTGCTCAGGAATTTTATTCAATAATCTTTATAAAGAATGTTTAGTAGCAA
GAAACCTGTTACTTACTCAGATTTTCTAATTTTTATTTTCAGAAATCAGA
AAAAGAGAATTGAGGAATGCTGATAGACTCTTGGAAGATGCTGAAGCTCA
GGTATTATTTATTAGTATCATTACTTTTATAAAACACTAATTTCTGCCGA
TGGACTTTTTTAAAATTGTTAGACCAAAGTCTAGCAATCAAAATTGGTGA
TTATTTACTGATGTGAAAGGATGGTTGATTGCATCTTTTTCATTGTCTGT
AAATCAAATTTAAGTTTTGTCTTATATTTATATTATAATTTACTTATTTT
TCATAGCTCACACAAATGTTCGAAGAAGCCCAGTCAGCCCCTGGTGCTTA
CAGAACCTCTCTACTTTCACAGACAAGAGGTCATAAAAGCGATCTTGAGA
AGCTGAAGCGAGAACTTGTAAGCTATATTTCTCTTTTAACAGTAGTGGAA
GGAAAGTACCTTTAATTGTTTAAAAAAGGGAGACCAAATTTTTATCATGG
TTACTTTCGAATAAGCGGGAGAGGAGAGGTTGGAAAAAATCTCAAAACTT
AATAAGCGGGGGGTTAAATAAAAAGGAGGCTAATACAGCAGAATTAGGAA
AATTTCAAACATTCAAGTAGGATTAGTTTTTAACAGTACCGGGTGACCCA
CGAAAAAGTTCAGACGTTTCCCGACGTCTTGAGGCCGAACAAATGTCCCA
AAGTGCTTGGAGTTTTGATATTTAGAAAGTAGATATCCTAACTTAAAATT
TGAGCCATCACTTTTTAAATTTGACCAACTTGTTTCTACTTATGAGCTTT
TAAAGTCAAAATTCACTTTTCGAAAAGTGTAAAAAACACGTAAAAAAGAG
GTATTAAATTCATGCAATCAATTAGAAAATCACTTACAAATTGACTTATT
TAACGAGTTTTATGACATTAATAATTAATAAAAACACATTTGAAAGTAAT
TTTTGTTTAAAACAAGACTAGACTAAGATTTTTTTCAAAAACTGTATATC
AAAAACGTCTAAAAATACCCAATTTGATACCCCTTTTTTACGTGTTTTTT
ACACTTTCCGTAAAGTGAATTTTGACTTTAAAAGCTCATAAGCAGAGAAC
AAGTTGGTCAAATTTAAAAAGTGATACACGCTTTTTTTTTATAAGAATAC
AATTTATAAGAATGTCCATGATGAAAATGGCCAAAAAATTAAGAATATGG
TAAGATATCACCATCATGGAATTTAGTAACTGAACTTAAGAATGCCATTT
TTAATGCATTTTAACCTGTAGATTGCCAATTTCGATCTTAACCTAAGAAT
GCCGTAAGAATATTTTTGGATGATTTTCACCAACAAGTTAAGAATATACA
TGATGAAATGAAAAAACACCATTCTTATAAAAAAAAAAGCGTGTAGCTCG
AATTTTAAGTTAAGATATCTACTTTCTAAATACCAAAACTCCAAGCACTT
TGGGACATTTGTTCGGCCTAAAGACGTCGGGAAACGTCTGAGCTTTTTCG
TGGGTCACCCGGTATTTTCCAAAATTTCTTGTTTTCTAAGCATGGAAAGG
ATAAAAATAGTAAAATAGTGCAAAGATATTGCCTCGATTGATTTTAAAAA
CTACTTTAGGCGTACAAACTTTTGCGAAAAATCGCGAAATTTGCGACATT
TACTTTCGCGAATTTGAGGGAAAAACATTTTTCGTGAGCATAAACTTTCG
CGAATCGTTGGATAAAAATGATAATTTTCGAATGAAAATTGCCTTAAAAG
TGAAAAATATCCCTTAAATCCACTAAAGACGGTTGCTCTTTGACTTTAAA
AAATTGCATTAAAAGATCATAATATGCTGAAAATTTGATGTTTATGTATT
ATGATTTCGAGGTTTTAAAGATTTCCAATTTTTTTGAGAATTTTCGCGAG
CATAAACTTTCGCGAATTGCCCTGTTAAGAATTTTCAAAGACATTTATTT
TCGCGAAAAAGGCCAAAATTCACGAAATTTGCGAAAGTTTCTGCTCGCGA
AAGATTGTATGCCTAAAGGCCTGTTTTCATCGATCGCGCGAGCGTGCACG
CTAGGCCAAAATTATTAAAATAGATTTGGCCGCACACTCCGCGCAATCAA
TGTTTGATTTCCATCAAAAACATACACAATCTGTATCTTTACATTTTTTT
GTTTACTCAGCAGTTTTCTCTTTCTTGATTGGTTGAAAAATTATCAATTG
AGATGTGCGCTCCTGTACGCTCAAAAAAGTTGAAAATTTTCAGCGTAGAA
AAGACCACAAGAGCGTACACTTTTTGTGTACAAGAAAATTTAATTCGTGA
CGTCAATAGGCTATTTTAGGAAATTTTGCCCTAGCGTGCACGCTCGCGCG
ATCGATGGAAACAGGCCTTAAAGCATAACAAGTCTCTCAGGCTGGAAAAA
ATACGTCATCTCTGCGAAAGCATCCAGCGAGGTCCTTTTTTTAAACATCT
GTTTCCCAGGCATAGCCTTCCTGGAAAATTTGATCTGTTGGCCAAAAGTT
AGCCCAATTAATCAGAAGAGGAAGGTTTTTAATATCCAAAATATTTCGGC
CCTTACTGTCAGTTACTGTTCATAGAAAGCCTCAAATTACATTAGAAACT
TTTGCATGATACCATCGCTTTCCAATATTTTCATATAATTCTAGATCACG
GCTAAATCAACATCAGTCCAGTCAAGCAGCAGCGGTAGTAGAGATGATCT
TCTTGGCTATGGTGGCACTTCAGCTACCTCTAATTTTGTAAGTCGAATAT
TTGAGTACCTATCTTTCTTTTGCTGAAACTTCTCACTTGTTGTCAAAGTA
TAAGACATGCGGGGTCAACTGAAACCTTCTATGATTCCTTCTAGATTTAG
AACGCCATGCTATGATTGAAATACAGTATTAACGCCTCTGTAACTCGAAT
GACTGTGTCCTTGACTATTCGAAAATATGTTCTCTGCCCTTCAGCTAAGA
ATGCCTTATAAACCTTAATCCACGACTCGAAATTTCCTTAATTCAAACAT
CATCATACAAAATCTGCGTTCCCCGTGCGGGTTGCGGGTTTTCAGTTATG
GAGACTCCACTGTAGGGAATTTTTTTCAGTCTCTCAAACTATATCTTCCC
TCTCGTTAGAATTTTTGGTGGATTTTGTCTGTCAAGTTAAAAACCTCTAT
TATTTAACTCAAAATGGATCTTTTTATATAGCACGACAGACTTTTTCAAG
GGATTTTTAATGAAACAATTTCTTTTTGAAACCCCTCCTTTATTTTACTT
TAGGAATCACAGCAGCGTGGTATGATGCAAGAAGGTTTGGACATTATGAA
CCGGACAAGCGATAGTGTTGCACGATCGCAAAGGATAGCTGCTGAAACAG
GTTTGTTCTGATAAATCTTTGTTCTTATATTTCAAATTAAAATTTAGTAC
GTACTTAGGTTAGTACTTAGGTTTTACTAAATCTAGTCTAAATCTTAAAA
TCTTAGACGTAATTTTCAGCTGAATTTTCATACTATTGAATATGCTTTGA
TATCTATGATCTATTCTACTCAATAAGTGGTAGATGATTCCATCAAAGCG
GGCTTGATGATCCAGACCAGAGCTTCAAAATATGTGCAAGAAAAACACAA
AATTTGATTACGATAGTACTTCAAGTCTCATCTTCATCGAATCGCTAGCT
ATCAAATGAAAAATGGCAAATGCTATGCTTTTATGTTGAAAAATGGTCAT
CTCCAAATTTAATGTTTATGTGCAAAGAAATAAAGTCTTCTCGTTTATTT
TTCAGACGAATATGGTGTGCAGATATTGGCAGACTTGGATGATCAAAAGG
AATCACTAATCAGAGTGCGGGACAAGGTACGACATTACTTGAGGCGTACA
CATTTTCGCGAGCAGAAACTTTCCCAATTTTCGCGAATTTTAGCACTTTT
CGCGAAAGTAGATGTCTGTGAAGATTTTTGAAAGAGCAATTCGCGAAAGT
TTCTGTTCGTGGAAGTTTGTACGCCTAAATTACTTGATACTCGTTATTCC
TATTCATTTCAGGTGTTTTAGAAGTACATGTTTTAACCCCAGGTACTCTT
GTGTGTTTAATTGTAGGGGGTCATATATTGCAATTTTCGGAAAATCATGC
CCATATCATTTGATAATGACCCCCCATTTTATGACCTTTATGATACGAAG
TGCCAAAATTGGCCAAAAACCTTCATTTTCCTAGGAATTTTTAGCAAAAC
CAGGTCAATAGCACTTATTTATGAACCCCCCCCCCCAATTTGTTGATTTT
TATTTGGAGTACTGACCCCCTGCTTATTCCANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNACATAGAGGATGCTCTAACTTGA
ATTTTGAGCTATCATACATTAGGTTTGAAAAAGTAATTCGAAAATTATTT
AAAAAAAACTGACTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAGCGAGCAAACTT
TTCTCTTGACACTTACCTTCTTTACACATAAAAATACCAAAAAATGCAAC
TGTGTTCATCAAAACTTGTTACAAATTTAAGAATATGGTAAAACAAGATA
TTCCCATCTGGGATAACATTTTCGGAAAAGCTGAAGATTTTTTTTGGAAA
TCTCCAAGAGAGGTTTTGATTTTATGTGTGTGTGCTATGTGAGAAATTTT
TTGAAAAAATAGATAATTATTCCTCGACTTGTTTCTCAAAGAACTTGGGT
TTGCATTGAGTTTTCTGGTGTTGGAAATGTTTATGACATGCAGATAAGAT
GGACAAACTGTTGGCAAGATATAAGATAAGAGAAAAAAGAACCAAAAAAA
CAATGAAATTATGTTTTTGTCATTTTTGTCTTATTTATAGCGTGATTGCT
GTTTTTAATGATTTTTTAAAATTTAGACATTGAAAAAAAGTCAGTATTTT
GGAAATAACTTTCGAACTACTTTTTCAAATTTTATGTATAATAGCTCAAA
ATTCAAGTTAGAGCATCCTCTATACAATAAAAAAAGAATGGACAAAAAAT
TTAAATCCTGAAGCTCACAATATCTCGACAAACCTGTATACTTTTTTTTG
GTGCACCCGGTATAGTATAGGTAACACGAACAAATAGTACAACACTAAAG
GTTCTTAACCTCCCGCAAAAGGACCACCAGATCATACCGCCAGGAGTTTT
AAACGAGTCCAGCTAGAGGGAGCAGATTTTGTGAGAATCTTCTAAAATGC
TATTAATTTTATTTTTCATTTGTTTTAAGGTTAAACAAACTGATTCGGAC
TTGACAAAAAGTCGAAGGATAATTCAGTCCATTGGAGTAAGGTAGGACAA
GTACTACTACGTGTCGATGGTCCTTTTAGAGACATCTAATTATTTTTTTG
GTATCCTCTAAAATTATCTTCTGCAAAGCTTCTAGTTCAAGACTGAAACA
AATAATCACTACTCGCTTACTCTGATCAGCCTTTTGAAAAACATTACTTT
GACAAACGTTTAAAATCTAAGAATGTAACTTTAAAATTTGCTAAAAGGGA
GTTTTTTATTGAAATAGCCCTTAAAGGTTTTGTTTTTAGATACGACTGAT
GTCGTATACTTACTCGTCAATTCTAATTTACAAGCTTTTTGATATTGAAT
TGACACGGATGTGGAGCAAGATTGGTCAGAAAGAGAAAAAGAAAAACATC
TTATTTTTGCTTATATCAGCACAATATAACAATAGGCAGACACTGTCCTG
ATATGAAACATGTGTCTGATATGAAACGAAAACACGTATGTAAAAACAAA
ACCTTTAAACCATATAAGCCCGAGCAATTTGATCCCCAAATTGTTCCTGC
CTCTTTCAAAGCACCTAAATAAGGCTGGAAAGCCTAGCCTATAACAGACC
CCTATAACAGTCATAGCCCCACTAGAACCCCCACTGGAAAATTTGGCGAA
AATTTCGTCCCCGGTGGGAAAGATACAATTTCAGCCCATTCGAAATTGCA
CTCCAAAACCATCCCCACTGGATATTTTTAACTTGGAACAATATGATTTC
TTTCTATCCAGTAATTTTTGTGGGAAAATGTTTTACTAGGGTTGCAAGAC
AGGGGTGCGAGACTGGGGTGTCCTATTCTATGATGGACTCTGATTTTATG
ATAGTAAAGCTCAGTGTCTGATACATTATATTTTTTTCTTCTTATAGGAT
GATTACAAACAAGCTGTTACTCATTGTCATCATTGTTTTAGAAGTCATCA
TTTTGGGTGCCGTTGTTTACATCAAGTACTTCAAAAAGTAATTCTGTCCA
GTGGCTAAATGTTATGCTCGGTAATTCATTGATTGACTGAATCAGGCAGA
TAATAAAGAGTAGGGATGTACTGTATGTACTGCTTGTGAGAGCTGGTGAT
GGCGGCGGTCCCTCTAAAAAACAAGCTAAAAATTCACCAAACAGTACACG
CTAATTTTAGGACTATCTCGTTTTTTTCTTCATTTTTTGTTTCTTTTTTT
AAAAGGGTTTCATGATAATTTATTGGTTTTTTAAGCCTTGAGGAGGGGGT
TGAAATCACTATTTTCTAGGCCATTTATAAAATTGTTGTTCTTGGTGTGT
TCTAAGTTTCTGCCATGTGGCAGAGTTTCGCATTTTTATAAGTGTGTCTT
GTGTGCGTGTCTTGGTCGGTGATTCATCTTTTTTCTCAAAGAAAATTATT
TTTTGAGGTAGCTGATCGCGGAAAATAACTTTTGGAGTGATTATTTATAT
TAAAAGCGGTTTTAAACTTCAGTTAAATTAATTCCGAGGTTAACTCCTTA
TACGATATAATATTCGAACAATTTTCGAGTAGAATTTTTTATGATATTGA
TTTTTATATTTCTTTACAGGAAAAACATTAAAACTATTAACTAGCTCAGT
CAAAGATATTTTTTAAGAAAAGACAGTCTCGTCAAATATTAAAAATGCAA
TCATTTGCGGAATTGTGACATTTTCTTATACTAAAATTAGCTAGTTTGGC
ATTTTTCCTGGATTGTTCTCCTAATGAAACTAGGAAACCTTGTATCTAAT
GAATTTTTTGAATAATTATGTTAGTGTTAAATTTAGTATAAATATTTTTT
GTTCAGTATTAAAGATTTTGGATCCATTTAAAGTATCCCAAATTCGAAAG
GTAAATAGAAATTGCAAATTTCAATCCAAAAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041641XLOC_041641Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066591-exon-scaffold_456-1575043694:889268..889429TCONS_00066591-exon-scaffold_456-1575043694:889268..889429Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1575043694:888529..888587TCONS_00066591-exon-scaffold_456-1575043694:888529..888587Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1575043694:888213..888323TCONS_00066591-exon-scaffold_456-1575043694:888213..888323Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1575043694:885893..885985TCONS_00066591-exon-scaffold_456-1575043694:885893..885985Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1575043694:885280..885376TCONS_00066591-exon-scaffold_456-1575043694:885280..885376Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1575043694:884804..884874TCONS_00066591-exon-scaffold_456-1575043694:884804..884874Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1575043694:882939..883000TCONS_00066591-exon-scaffold_456-1575043694:882939..883000Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1575043694:881096..882082TCONS_00066591-exon-scaffold_456-1575043694:881096..882082Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1510915933:889268..889429TCONS_00066591-exon-scaffold_456-1510915933:889268..889429Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1510915933:888529..888587TCONS_00066591-exon-scaffold_456-1510915933:888529..888587Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1510915933:888213..888323TCONS_00066591-exon-scaffold_456-1510915933:888213..888323Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1510915933:885893..885985TCONS_00066591-exon-scaffold_456-1510915933:885893..885985Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1510915933:885280..885376TCONS_00066591-exon-scaffold_456-1510915933:885280..885376Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1510915933:884804..884874TCONS_00066591-exon-scaffold_456-1510915933:884804..884874Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1510915933:882939..883000TCONS_00066591-exon-scaffold_456-1510915933:882939..883000Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1510915933:881096..882082TCONS_00066591-exon-scaffold_456-1510915933:881096..882082Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1491911889:889268..889429TCONS_00066591-exon-scaffold_456-1491911889:889268..889429Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1491911889:888529..888587TCONS_00066591-exon-scaffold_456-1491911889:888529..888587Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1491911889:888213..888323TCONS_00066591-exon-scaffold_456-1491911889:888213..888323Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1491911889:885893..885985TCONS_00066591-exon-scaffold_456-1491911889:885893..885985Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1491911889:885280..885376TCONS_00066591-exon-scaffold_456-1491911889:885280..885376Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1491911889:884804..884874TCONS_00066591-exon-scaffold_456-1491911889:884804..884874Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1491911889:882939..883000TCONS_00066591-exon-scaffold_456-1491911889:882939..883000Clytia hemisphaericaexon
TCONS_00066591-exon-scaffold_456-1491911889:881096..882082TCONS_00066591-exon-scaffold_456-1491911889:881096..882082Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:881096..889429 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.8305	44.764	67.8183	71.0496	15.1566	10.6782	19.6144	22.1657	17.877	15.5476	20.5327	14.4594	16.2704	16.4606	15.1475	13.8351	16.4677	16.1148	13.8667	14.6611	17.0637	17.2421	18.6312	19.0087	18.9001	24.0475	17.3297	14.994	19.1878	15.3638
Blast
[Close]
BLAST of TCONS_00066591 vs. Swiss-Prot (Human)
Match: VTI1B (Vesicle transport through interaction with t-SNAREs homolog 1B OS=Homo sapiens GN=VTI1B PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.024e-24
Identity = 78/230 (33.91%), Postives = 135/230 (58.70%), Query Frame = 3 
Query:   54 SGIMSSEEYENCLDEFRTYYDQLKSVVKNKLPKLTGEIRKRELRNADRLLEDAEAQLTQMFEEAQSAPGAYRTSLLSQTRGHKSDLEKLKRELITAKXXXXXXXXXXXRDDLLGYGGTSATSNFESQQRGMMQEGLDIMNRTSDSVARSQRIAAETDEYGVQILADLDDQKESLIRVRDKVKQTDSDLTKSRRIIQSIGVRMITNKXXXXXXXXXXXXXXXXXXYIKYFK 743
            S   SSE +E   + FR  ++ L+ V +  L     E +K+ +R+ D   ++A   L +M EE + AP ++R  ++S+ R ++ DL KL RE+ +   T+        +  +  Y   +   N    QR M+ +G + +NR + S+ RS RIA ETD+ G +I+ +L +Q++ L R + ++  T  +L+KSR+I++S+  ++ TNKLLL +II+LE+ ILG +VY K+F+
Sbjct:    3 SSAASSEHFEKLHEIFRGLHEDLQGVPERLLGTAGTEEKKKLIRDFDEKQQEANETLAEMEEELRYAPLSFRNPMMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDMKYGI--YAVENEHMNRLQSQRAMLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSRLVNTSENLSKSRKILRSMSRKVTTNKLLLSIIILLELAILGGLVYYKFFR 230
The following BLAST results are available for this feature:
BLAST of TCONS_00066591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VTI1B2.024e-2433.91Vesicle transport through interaction with t-SNARE... [more]
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