TCONS_00067177 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067177
Unique NameTCONS_00067177
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1946

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067177 ID=TCONS_00067177|Name=TCONS_00067177|organism=Clytia hemisphaerica|type=transcript|length=1946bp
TGGATTACGAAATCCAAAAAACGTTGTGCTTTTTTTAGATACCTCTCTCT
TTCCAATTCTTAATTTtgtgtttcttctttttttcctcttctttattttt
tgaaacgaAGTAAAAAAGGGTAGTTTTGGGTTGTCGTGTAAAAGAAAACA
TATTTGAGACGTATTGATGCGttcatttttgtttaaaatgcgACTCCTGT
TACCTGTGCCAAACTGAAGTTTTCTTCTATGGAATCCTACAGACTTTGAA
AAAGTGGGTTTAGATGACAACGAAAATGCATTCACTTCCATACGATGGAA
GCTCTATCACAACGAATAAAGCAACCATTCACCGGTTAAAACCTGCTATA
GCGCCCATCCGACGTGACTTTGATAACAATGGGCGAATTGTAAGGAAATC
TTCAAAATGTGACATATTCTTACCGCCCATACATAAACCGCTCATGCCGA
CACCTTTAGCTAATCTGGAAACAGCTAAAAATTGGTCGAACACAACGAAA
GAGttaatttctcaagaatgggaTAAACTACAACGTATCAAGCAGCGCGG
TACGCTAGCTCCGAAATACTCCGTTCTTCCACCTATTAATAATAAGAGCA
AAAACAGCAATACCGGTGATACATTGGGCTTCACCGCAGATGGGTTAAGT
AGCAAAGGAGAAACTATAACCGCGAAAAGCTTACGACAAATGTTACAAGC
TACGGAGAACGGGGGTGAAGAGTCGTCAACGAATTCCGATAAAGAAATCA
AGCACCGGCGCTCTAGTAAACGAAATAAGAGACGTTCTAAAGACATCGAT
GCGAATAATGGGGAATCTAGCACAGACACAGTCCAACTACCGAAAATCAA
CGAACAGAGCAAAGCCAATATGACTATAATTGAGACTGAAGAGGATGAAC
AAAGAACTGTAAAAGCCAAAGAGGAAGCCAAGAAAAAGGACGTCGTTTTA
CCCAAAATACCGTCACCAAGCTTGAGTAAAAGTAAAAATGCGCTTAAAAT
CGAAGAAAGGTATAGCACGGATATGATTGAATGGGCAAGATTTAAGGGCC
GTCGACATGCTATTTGCTATGAAATGGACCCACTTTTCCGTGAGTTGACG
TCAATTATCAAGTATAATCTGCTTGTACAGCACCTTGAAGATATATGGAT
GTGTTAAAATATGTTTATGATAAAGTAACGTACGAAGAAGATATACCGTa
cttacctataacaatccaaaagttcacTGAACAATCAAACGCGAAAAGAT
GAAAAAAGGCTGTGCCACAGCACTTATCCGAATATTTGCGATTTTGGAAC
CTTTGATTGTTAGGGGAGCTTTTGGATTGCTATAGGTAAGTACGGTAACA
ATGAATGGCTTTCCGGCTCAGATTTCCGTGCATAAATGGAAGGTTGAACG
ATTGAATGGGTGAATGAACGAATGAGTGAATGGATgggtgaatgaatgaa
tgaataaatggtTATATGACACCGAAAGAAAGAACAAATTCATTTTCATG
CTAAAGATATCTTCACTTGACGTGACTAACCAATACCGAATTATTTTGTA
GGGTTGGGATTTTTTGCCCAATTGGATTCTTCGGACAAACagtattgtta
aaaaatttaaacagcCTGTATGCAGCGAGCAAGTAAACATAACTTCAAAT
TCAACGCATTTagtgatttttcgaaaaaattcaggaaaatcaaTGATCAG
TTGATtgttcaaacaaaaaaaagataagaaatATCCTAGGTGGGAAGTCT
ATATTTCTCCCTGTCCAGTCTAACAAAAACCTTGCTGATTTCCAAGTTTC
TGTGTTGTAAAATTTCCGGAAAATGGGAAGAATTTTTAAAGtacatttta
tttattattttgtaaCATACTTAAAACATTTATTTATATGCATTTTGTTG
TACATATCAAATTTCTAACTATATGGGTGTAAAAATAACTGTGAAC
Run BLAST on NCBI

protein sequence of TCONS_00067177-protein

>TCONS_00067177-protein ID=TCONS_00067177-protein|Name=TCONS_00067177-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
MTTKMHSLPYDGSSITTNKATIHRLKPAIAPIRRDFDNNGRIVRKSSKCD
IFLPPIHKPLMPTPLANLETAKNWSNTTKELISQEWDKLQRIKQRGTLAP
KYSVLPPINNKSKNSNTGDTLGFTADGLSSKGETITAKSLRQMLQATENG
GEESSTNSDKEIKHRRSSKRNKRRSKDIDANNGESSTDTVQLPKINEQSK
ANMTIIETEEDEQRTVKAKEEAKKKDVVLPKIPSPSLSKSKNALKIEERY
STDMIEWARFKGRRHAICYEMDPLFRELTSIIKYNLLVQHLEDIWMC
Run BLAST on NCBI

transcript from alignment at scaffold_466:131608..141883+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067177 ID=TCONS_00067177|Name=TCONS_00067177|organism=Clytia hemisphaerica|type=transcript|length=10276bp|location=Sequence derived from alignment at scaffold_466:131608..141883+ (Clytia hemisphaerica)
TGGATTACGAAATCCAAAAAACGTTGTGCTTTTTTTAGATACCTCTCTCT TTCCAATTCTTAATTTtgtgtttcttctttttttcctcttctttattttt tgaaacgaAGTAAAAAAGGGTAGTTTTGGGTTGTCGTGTAAAAGAAAACA TATTTGAGACGTATTGATGCGttcatttttgtttaaaatgcgACTCCTGT TACCTGTGCCAAACTGAAGTTTTCTTCTATGGAATCCTACAGACTTTGAA AAAGTGGGTaagttttaaagaattctttAATGTGAACAACGAGCTGATCG TGGATAATTTTTACAATATGATGATTTCTAAGGTGCGTGTTAATTTACAT ATTGATTGCATAACAATAAACTTTTGCATAAATTTCGTCACGAACATCGC TTGCCTcgctttgaaattattgccaaggtgattaacttccagcggatttt attacgACTAATTTctgttcataaaaaatcatttaatgtctcaagagaca agGCCCGTGTTAATTTACATATCGATTGCATAACAAtaaactttttcata aatttcgtcGTGAACAtcgcttgcctcgttttgaaattattaccaaggtg attaacttccagcggattttattacaactaATTTCTGTTCATAAAAAACC ATTTAATGTctccaaagatttattatacactggataaacgactcataaaa cgatggagagcgaccagtgtattttcattgtttcagaaaacaattgatgt tctagacgatcctatcgtctacacaagatcactaaaaaagggaatagttt aggagaggcgtgataaattcgggtggagtaagcagtggcggagatgttta NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNGCTTCATATGTTTAACATACTTTGACTTCAGAAATAATCAC CACAAAGACTAACAGGtttgttgttaatattttttacttccaaccttcat ttttcttctttttaaactACAGTAATTTAACTCAAAGACACCACACTTGC TGTACATTTAGTATCATTTTACACATTTCCCTTCTGataaaaacagcttt ttactttcttttcaatactccctatttttgttttgttagaaaTTCTACAA GTTactaatttttaacttttatattttttatatttgacatGTTCAGTAGT ATAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA GTAGTATAGAAGTATAATTATAGCCACAGGaaatcattttgaagttttta atttttgtttgtctgGAAGATGGTATCAATTTGAAGGTAGACTATGTGCT TCTGTCAACTAGAGAAGAGTTTTATTCTGATACAAAAAATCATTACAGGA TAGTTTGACAATTGAAGACAAtttgtttacaatattttcCACCATATTCT ATATTTAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTTTACATGATATAAACATTCCTTTGCCACacaattcaccaaattttg tttgagatattcattcaatctgaagttatttataaaaaaatataagtcaa aaatttatatatatgaaatattttaattccCGCAACCCAAGATTATGCTA AAAAATTTTGTCGCTGAAATGTCTTGACCTGTGTAGTAGAATAGTAAAGG AATAACAATTGCTTGAGAATGTGTAAgtacaatttttacattttgggGTA GCAACATGAGTATTTACAGCTTGCATTTGGCATTaccatttttgattgtt ttgactgGTTTTATTATTCATATAACGtacagaacaattttccaaccaCG TTCTACTGgttcaatttcacaaatttcacaaaataacacaaaataatttt ataaaaaggtaTATAAGCAGTAGGGAAACTTATTACCAAAACCTTTTTGG TGatttcacaaaaacatttttggttaACAAAGCATATCAAGGCACCATTG TCGtccacagctgattggttgaaagtgacgtattgacttattttacgtca cttacaacgaaTCACCTATTGGGTATAtacatgatgtaatgtcagaagac cttGGAATGccacatatcatgaatttgcagCGAATAGGTGcaattcatga aaaatttcaacctttcacACCGtgaatttgccaaaaaattatGATGACTT TTAAACGTTTTGTTTTTCATGTATATACTCGTACATCTGGAATTAACTGA ATATAAACTACGTTCTGGTTTAATTAATTGCCCCTACCTAACCTAAGAAC ACCCTCTTTttacttttcgagaaaaaatctaaaagaagCTTGTCCATGTC CATTGAAGTGGCAATCTGAACACCCAATAAATAAGAAGAATTAGAATTTG TAACACCAGTTCTAAAAGGTTCTATTCCTAATAACTTGGGAAAATAAAAT ACTAGATTAGaaacaaacatgaaaaaatgTACACGAAAAGGAAagtattt tcaatcaaaaatcaaaaagtagttTGAGGTATAAAGTAGTTGAGAATAGA GTGAAAGCTCGTGCACATAAGCCACATAAAAGCAcaagctgaaaatttta aggaatGGAAAGAATGGCAAACATACCTGATTAAAATGGAATCTTGAGGG AAAAGTCAGTCAGGTTGTTGTTcatattcaaaaagatttttccaaaagca aaTCTTGAGGAATCTAATCCCTACTGACACACTAAAGACTTATATACTGT ACACAAAAATTCATGCATAAAAAAGACTAATAAAAGTAGAAATAATTGTT CTCCACCATGAAAGTAAATTAAACAATCTGAGTGAAATTTCATCAGCCAT CTTTCTCAAACGTTTAGCTGTTTGCACTCAGTTCGAACAAAAAACGCAAA CGGAAAATCTCGAAAACCCGCTGACCTCTCTCAGAGGTCAGTCAGGCAAA ATCGTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgatgttctagctt tgtccgtaaaggacaactgtcatagcggctcgaagatgtctgatttttaa aaatgtttatcagtcttatttttaaaaagttctctagctctttttctttg tacatttgaagaaaaaaaGTTTGAAAGTAAGGCTAGCATTccgagctgga tacatttgtgaaatgtaatgtgagaaaaacatcattagacaagaaattca gacaaaatgcttatagtgacacgaaattttcagttggaaatatctttcca agactgtccccggaagagctgaaattaacatacataagacttgagtgtct tggctccactgtgatacgaaaatcctttggaggcacgtggtggcaaggtg gtttttttgaggttgaagtttgaaaatttccggtgtcaacattaaatttc ttatacacaacacgtcttttgcatctttctcacagcttgaaacgtcataa cgacttataactagcaattaagtggaagaatctgactctcacaggaaagt ctcttttgggaattggatgagtgaatttcgataaaaaacgcaattaaaat gtttcgaaaaatcatttattcagggaaggagagtgaacaataacatcatt actgcggacatagctagtaaacgagaaatcggcaaaaatctgttacttgt atatccagtgtataataaatccttgatgtctcaagggacatgaTCACCAT GGCAATTGGTTAAATACgaaggcaagtgatgttcatgacgtaTTTTATGA AAAGATCTATCCATTCAAACAAATCCTAACGGGTCAAAAGTCTTGGACCA CAGGCCGGCGACAAAGAATTAAAGTTGTATCAGTAGTTAAAATGGAAAGT TTTTAGCCTGTTATCTGGTAAAAGTCTGTGAAAATCTTACGCCACGAATC TTATACATCTCTTAACAATAATATACTTGTTGTTGTTGCCAGTGAAGGAC TGATTTGATTGATTTATGCCTTAATGATTTATGGTTTATGATTTCAAGCC TCACCTTTATCATATGATCATGTTTATACCAGCCAGGCCCggtggaagcg gggagactggggataCTTCAGCCTCTCCCCTTTTTtagaccattttccta agaaatagggtgtttttgagtccacagagccttaaaatgttcttaacttg ttcttaacattttggccagcgaagccttatgttcttatatagtttgttct tataaaaaacgtgtagaaggCTTACATTTCAATTCGGAACATATAGGGCC ACCTCTTTTATCCAGTCttagaattattttatatcaaggCTGGATAAACA CTGgtttttgtaaaaagaaaaactgttgATATTTGAAACGTCGTTTAAAA CAGGTTCAAAAGAAGACATTCCCCACCTTCCCTCTTAATCTTGATTTTAG AATAgtaaaaaagtgaataaaaTATCGAGAGAACTATAATCCACCtccaa attattttgttttgtacaCAGATATCGTTTAACGAACACTAGATAGGATC TTTCTCGATCACTAATGGCTCTAAAGCGCCGTCTTTTATTTAGCTTTTAC TAGCAGCATctttgaaagttttaagtcaTCGAAGTTAAAAATATTCTCCT CTGCTTATTTTGCTTCAAGACCCACTGCCTGGAAAAGAAAGCAAGCTCCA TCTTCTGTCTTACTATGGATGTCTGTGATTTTACTCCCAAGTCAAGTAAC TCGAGAAATGAAAATTCATTAGACAGTTTCAAAAGCGAGAACATAATTTT CAAACCTTAACATCGTTAAAAAAGGAAGGGGTTTCCTTTCCCCATTGATA TCAACGAGAGGTTGTTATGATATCCATTTTTGTTGTTTGTAACCGTGGAT TGGTTTTGAATGTCTGAACCGACGCAAGTTTAACCCAATTTAAACACACC TTAGAAGATATTATattttatgatatagaaagaAAAGCGCacctctatgc tgacaaagcagaaaaacaataaaatttctcaatATTTGTGCTTACTTGAA AGATCACACCCccgttcaatttttttcaattaaattagaaaattgaaaCA GTGTTTTGGTCACAGGGATATACTGACAGACAGGTCGACAGACAGACAGG TCGACAGGCAGACAGACAGGTAGTACGATCTCGTCAGCTTTTTTGTCAAA AGAagtcaaaataagaataaaaataCGTACCTCATAAAGACAGCACCAAG GACGCAATTCACGATAAAAGAGATCAAAGTCAACTCCTCTTTACCAACCA AAGGGTCTTTCAGTTTCGATAAATATTCTTCCCTATGTATGAAGGAATAG TGGATGGCCCATGACGTACCAAATGCCACTATCAATCTTTGGAAGACTCT GATATTGCCAAGTTTAGATAATGATACCTGTAGATAGATAGAGAAAAGAA GAAATTACATAAAaacctctttaattcgaacctctactattcgattctct ttgtaattcgaactaaaatatttgtcCCCTTCAACTGGAAAGTTGTTTAA AGCACtttctgttattcgaatctttttgtaatttgaattAAATTCTTGGT CTCTTGACCAGCCATACTGGTTTAAAAGGCCAATTTAGGTTGCGTCATAT TTTCAAATACTTCCCTTGAGAGATATTTTGAAACAAACAGAATATTATAG AATATCCTTGCAAAACAGACTCGTTCTCGTCATGAGAGGTCCTTAAAGGt tctatttttacataagtgttcccgtttcatatcagacacatatttcatat aaggcaggacagtgtctgcctattgttatattatgctgatattagcaaaa aatgtctttcttttcctctttctaattaatcttgctccacatatgtgtca attcaatgtcaaaaagcttgtgaattaaaattgatgagcaagcaaacgat atcactcttatttaaaaacaaaacctttatcTATGAGTCTTGCTCTGAAC AGGTCTAAGTAATTGCTGTCATTATTTTAATCTACTAAGAAGCAcgcttt taaaattgcaaattcattaaaacctttttttattaacgctttaagtgcca cggtcagttttttttaaggaaatcgTTAGTTCAAACTgtaaggcttatat ctccggatctagaaggagttagaagctcgtttatagttcTTTGGAAATCT TAGaatctcctctttcttttaggcgcctTCGGCACTGtgctgatatatac gacattggcacttaaagggttaaatcaggggggggggtcttctttAAACT CTTGTTATTAATAAGGAGTATGTAGTTGAAATAATCGGAAAAGAGAAGTA ACaaactgaaatatttattaCTTGCTGATTAAGCGATAttaaaacaagct agatgctgaatggacctacctgatggtgaaagttagatagcaatgcgagg agaaaaatgaaaaaaatcagtcagtaaatatagcgtttagcgaaaatgca caACACAATatattcatcattgattgttgatggggggagagggaagggtt gtaaggaaaaataaaaagaaagttctggtcgcaaaaatcagttttattga caattgaatcatgcttgatggtgagcattgttatcaataatgtttttgtg tgaaaaacatagaaatataaggaaaaatccaacgaaaatctgcaaaaacg gcgatttccggcattttcgaccacaaaaaaattttctcaaaaatcggact cggccatgttttggacattattaatacgcatctttgaacaaaaaatccca agaagaaaaaacaatctcgagaaaatgccaaaaaaacagtttttccggca tatttccggccggaaaatctttttcttcgaaaatcgggctccgtcacatt ttgcatcattgtgccaaaaatcagaaaaaactaacgagccaatcctgaga aaagctggtaacagacgaacggacgaacggacggacatcggttaatttat aggacctccaccggggtacccggaggtaggtccaaaaataatccAGAGCT TTTGTTACCAGAtaagaaaaacgaagaaaattaTTTCCTTGATATAGACC TATACCTGCACTTTCCCAACGGATAGAGGTTATCGTTATCTTCAGTGTTG GTAGGAGTCATGAAACACAATGACTGTAAGCCATGGTCAGCCCCCTTAAA ATTTGTTGTAGTATAAAAGGtcttgaatttcaaaaagatttaaaacatca ttcattcattcaacatcattattatgctcctaataaaTTCCCGTGCATGT TTTTAGTTCTTTAATATTTCAGGCAAAAATAAGGCAGATATATTTCTAGT TAAAGAGTGCAAAAGCCTCAAGTTGGTTTTCAATTTACAATAACACATAA CTCTCTATTTTCTTACCAAAGGAAGGAAAGAAAAATCGACATTGGTTGAA TattgtaaaaaaacaaaatttttgaaacgcTTTTTTCAATTGAACTGTGC CTTTCATTGTATAgatatttgatttgatttgaagtTCAAGCACATAGACG gacatttcagaaaaaaatctaaataaaactTCCAGGGAAAATGGAGAATA CATATAATAATTTGGTCCATATTCTAGATATTTAAGTGAATTTTGTTAAA TAATTCTAGGACGTCTGCGATGGAAAATTTCTGAacaattaaatttgaat ttaccAAACtcagaattttctttttctttattcgAAGGTTTAGATGACAA CGAAAATGCATTCACTTCCATACGATGGAAGCTCTATCACAACGAATAAA GCAACCATTCACCGGTTAAAACCTGCTATAGCGCCCATCCGACGTGACTT TGATAACAATGGGCGAATTGTAAGGAAATCTTCAAAATGTGACATATTCT TACCGCCCATACATAAACCGCTCATGCCGACACCTTTAGCTAATCTGGAA ACAGCTAAAAATTGGTCGAACACAACGAAAGAGttaatttctcaagaatg ggaTAAACTACAACGTATCAAGCAGCGCGGTACGCTAGCTCCGAAATACT CCGTTCTTCCACCTATTAATAATAAGAGCAAAAACAGCAATACCGGTGAT ACATTGGGCTTCACCGCAGATGGGTTAAGTAGCAAAGGAGAAACTATAAC CGCGAAAAGCTTACGACAAATGTTACAAGCTACGGAGAACGGGGGTGAAG AGTCGTCAACGAATTCCGATAAAGAAATCAAGCACCGGCGCTCTAGTAAA CGAAATAAGAGACGTTCTAAAGACATCGATGCGAATAATGGGGAATCTAG CACAGACACAGTCCAACTACCGAAAATCAACGAACAGAGCAAAGCCAATA TGACTATAATTGAGACTGAAGAGGATGAACAAAGAACTGTAAAAGCCAAA GAGGAAGCCAAGAAAAAGGACGTCGTTTTACCCAAAATACCGTCACCAAG CTTGAGTAAAAGTAAAAATGCGCTTAAAATCGAAGAAAGGTATAGCACGG ATATGATTGAATGGGCAAGATTTAAGGGCCGTCGACATGCTATTTGCTAT GAAATGGACCCACTTTTCCGTGAGTTGACGTCAATTATCAAGTATAATCT GCTTGTACAGCACCTTGAAGATATATGGATGTGTTAAAATATGTTTATGA TAAAGTAACGTACGAAGAAGATATACCGTacttacctataacaatccaaa agttcacTGAACAATCAAACGCGAAAAGATGAAAAAAGGCTGTGCCACAG CACTTATCCGAATATTTGCGATTTTGGAACCTTTGATTGTTAGGGGAGCT TTTGGATTGCTATAGGTAAGTACGGTAACAATGAATGGCTTTCCGGCTCA GATTTCCGTGCATAAATGGAAGGTTGAACGATTGAATGGGTGAATGAACG AATGAGTGAATGGATgggtgaatgaatgaatgaataaatggtTATATGAC ACCGAAAGAAAGAACAAATTCATTTTCATGCTAAAGATATCTTCACTTGA CGTGACTAACCAATACCGAATTATTTTGTAGGGTTGGGATTTTTTGCCCA ATTGGATTCTTCGGACAAACagtattgttaaaaaatttaaacagcCTGTA TGCAGCGAGCAAGTAAACATAACTTCAAATTCAACGCATTTagtgatttt tcgaaaaaattcaggaaaatcaaTGATCAGTTGATtgttcaaacaaaaaa aagataagaaatATCCTAGGTGGGAAGTCTATATTTCTCCCTGTCCAGTC TAACAAAAACCTTGCTGATTTCCAAGTTTCTGTGTTGTAAAATTTCCGGA AAATGGGAAGAATTTTTAAAGtacattttatttattattttgtaaCATAC TTAAAACATTTATTTATATGCATTTTGTTGTACATATCAAATTTCTAACT ATATGGGTGTAAAAATAACTGTGAAC

Coding sequence (CDS) from alignment at scaffold_466:131608..141883+

>TCONS_00067177 ID=TCONS_00067177|Name=TCONS_00067177|organism=Clytia hemisphaerica|type=CDS|length=894bp|location=Sequence derived from alignment at scaffold_466:131608..141883+ (Clytia hemisphaerica)
ATGACAACGAAAATGCATTCACTTCCATACGATGGAAGCTCTATCACAAC
GAATAAAGCAACCATTCACCGGTTAAAACCTGCTATAGCGCCCATCCGAC
GTGACTTTGATAACAATGGGCGAATTGTAAGGAAATCTTCAAAATGTGAC
ATATTCTTACCGCCCATACATAAACCGCTCATGCCGACACCTTTAGCTAA
TCTGGAAACAGCTAAAAATTGGTCGAACACAACGAAAGAGttaatttctc
aagaatgggaTAAACTACAACGTATCAAGCAGCGCGGTACGCTAGCTCCG
AAATACTCCGTTCTTCCACCTATTAATAATAAGAGCAAAAACAGCAATAC
CGGTGATACATTGGGCTTCACCGCAGATGGGTTAAGTAGCAAAGGAGAAA
CTATAACCGCGAAAAGCTTACGACAAATGTTACAAGCTACGGAGAACGGG
GGTGAAGAGTCGTCAACGAATTCCGATAAAGAAATCAAGCACCGGCGCTC
TAGTAAACGAAATAAGAGACGTTCTAAAGACATCGATGCGAATAATGGGG
AATCTAGCACAGACACAGTCCAACTACCGAAAATCAACGAACAGAGCAAA
GCCAATATGACTATAATTGAGACTGAAGAGGATGAACAAAGAACTGTAAA
AGCCAAAGAGGAAGCCAAGAAAAAGGACGTCGTTTTACCCAAAATACCGT
CACCAAGCTTGAGTAAAAGTAAAAATGCGCTTAAAATCGAAGAAAGGTAT
AGCACGGATATGATTGAATGGGCAAGATTTAAGGGCCGTCGACATGCTAT
TTGCTATGAAATGGACCCACTTTTCCGTGAGTTGACGTCAATTATCAAGT
ATAATCTGCTTGTACAGCACCTTGAAGATATATGGATGTGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041971XLOC_041971Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067177-proteinTCONS_00067177-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067177-exon-scaffold_466-1491911889:131608..131864TCONS_00067177-exon-scaffold_466-1491911889:131608..131864Clytia hemisphaericaexon
TCONS_00067177-exon-scaffold_466-1510915933:131608..131864TCONS_00067177-exon-scaffold_466-1510915933:131608..131864Clytia hemisphaericaexon
TCONS_00067177-exon-scaffold_466-1575043694:131608..131864TCONS_00067177-exon-scaffold_466-1575043694:131608..131864Clytia hemisphaericaexon
TCONS_00067177-exon-scaffold_466-1491911889:140195..141883TCONS_00067177-exon-scaffold_466-1491911889:140195..141883Clytia hemisphaericaexon
TCONS_00067177-exon-scaffold_466-1510915933:140195..141883TCONS_00067177-exon-scaffold_466-1510915933:140195..141883Clytia hemisphaericaexon
TCONS_00067177-exon-scaffold_466-1575043694:140195..141883TCONS_00067177-exon-scaffold_466-1575043694:140195..141883Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:131608..141883 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0114277 0.00715892 0.0324926 0.0450021 0 0 6.75674e-06 2.14752e-08 0 0 0 4.40256e-05 0.0155076 0.0128761 0.0020829 0.00135013 0.030107 0 0 0 2.2961e-06 0.12215 0.0475382 0 0 0.0627362 0.0935103 0.071351 0.00102945 0.00149628
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067177 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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