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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067454 ID=TCONS_00067454|Name=TCONS_00067454|organism=Clytia hemisphaerica|type=transcript|length=650bp
TTTATTACATATTTGTATGTGTAATAAATCTTTTGGTTGTTTTCTCCAGA
tgccatttttaaaacattatcCAGATATTTACTACTATTGATCTTGTTTT
GTTTCAGACGAATGTCAATTCTTTCACAATGGATGTAGACATGGATGAAG
GGGGTACAGGTGCCAGCAGCAGCAATGGAGAAAGAGGGCAAaactccaaa
caaaaagaaTATGATGAAGACGGTTGGGAAATTGTCAGAAGGTCCAAAAA
ACGTTGATATTTCCAAACCATTTTGCGTCGCGGTGGTTTGAAAAAGATTG
TTCTTACCCGTGGTGAAAGGTAGACTTTGGTTCGTCCTGGGTTTGTGTTT
GGTAGACCACTTCATCTGGTACCCGAATACGTTGCGTTGGTAGTTGTCAT
CAAACGACTTGGACAGAAACTTCTTCATTACTCGTACAAGTTATGTTTAC
AAGATACTCACTCGAGTGCAATGGAACGTTATCAATCTTATAAACTAGAA
GAAGCGAGAGATGATTTCCCCAAAGAAGTGACGTCGAAATTTTCTTTACA
AACATATAATAAACATTACGAGCATGAATCTGGTAATGTCACCCAAATAg
gtgaaaatttttggaaaaaataaagttttgaatttcacttttattcctgg Run BLAST on NCBI transcript from alignment at scaffold_47:469230..470766+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067454 ID=TCONS_00067454|Name=TCONS_00067454|organism=Clytia hemisphaerica|type=transcript|length=1537bp|location=Sequence derived from alignment at scaffold_47:469230..470766+ (Clytia hemisphaerica)
TTTATTACATATTTGTATGTGTAATAAATCTTTTGGTTGTTTTCTCCAGA
tgccatttttaaaacattatcCAGATATTTACTACTATTGATCTTGTTTT
GTTTCAGACGAATGTCAATTCTTTCACAATGGATGTAGGTGAGTAATGAA
TAGAGATTGTTTACCTAGATCAATCACATCTTTGCCATTCGCCAGCGAAT
TCTTGATTCGTCTTCCCTCTAAGAAGAGTAGGAGGAAAAACTTTCTATCA
TAACATAAACAAATCATATGCTgtttatttcgaaagatttTGTAAATCTT
ACTTGTGTTCGCTTCCTACGCTCTTGAGAAACTTACTTTTTAAAACAATC
gaaaatgagttttttaaagaaaagattttgcaaaaaaaaagcgACTAGCG
TAAATTAAACAAAGCTGCAAGGCAATCATTAGATCATACCCTTTCTTGAA
ATGACAAAAGTTCTCTTCCTTGATAGCAttcttatcaaataaaaatctGT
TTGGCAAACCGCTTTCGATTTTCTCACATCAGCAATTACGAAAAACACTT
TGATAAAACCAAGTTAACATGTTTTCAAATAATTGATACACAACAATATC
TTGTAATACAGACGTAGCATTTGAGAGTGCAATTAATCTATTTTCAAATG
ACAACTTAACTAGTAATctcttaaatcttttttaaccATTATATGTGAAG
TGTAATTGCTTCACTGCTCATAATAAGATTTATTTTATCATCACATCAAA
GCTTTATGTTTCTTGTTAGCCCAACAACGTAATTGATGGTCTTAAGGATA
ATGCTACAACTCGAACAATATCTCTCCCTGATATATGCGTTGTAAaataa
ataaggtttttttaacTTCGTGGTGAAAATTGGATTAAGTTCTCCACTTC
AAGGTGAATGAAGAGGGGTTAAATTGAAAGAGGTCTTTTTGGATTTCTAT
TTTGTTCATCTTATTCATATTATGTTTTGATGTCTCTTCTTTTATTTGAT
TATGGgttttctacttttctttaaGACATGGATGAAGGGGGTACAGGTGC
CAGCAGCAGCAATGGAGAAAGAGGGCAAaactccaaacaaaaagaaTATG
ATGAAGACGGTTGGGAAATTGTCAGAAGGTCCAAAAAACGTTGATATTTC
CAAACCATTTTGCGTCGCGGTGGTTTGAAAAAGATTGTTCTTACCCGTGG
TGAAAGGTAGACTTTGGTTCGTCCTGGGTTTGTGTTTGGTAGACCACTTC
ATCTGGTACCCGAATACGTTGCGTTGGTAGTTGTCATCAAACGACTTGGA
CAGAAACTTCTTCATTACTCGTACAAGTTATGTTTACAAGATACTCACTC
GAGTGCAATGGAACGTTATCAATCTTATAAACTAGAAGAAGCGAGAGATG
ATTTCCCCAAAGAAGTGACGTCGAAATTTTCTTTACAAACATATAATAAA
CATTACGAGCATGAATCTGGTAATGTCACCCAAATAggtgaaaatttttg
gaaaaaataaagttttgaatttcacttttattcctgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067454-exon-scaffold_47-1491911889:469230..469367 | TCONS_00067454-exon-scaffold_47-1491911889:469230..469367 | Clytia hemisphaerica | exon |
| TCONS_00067454-exon-scaffold_47-1510915933:469230..469367 | TCONS_00067454-exon-scaffold_47-1510915933:469230..469367 | Clytia hemisphaerica | exon |
| TCONS_00067454-exon-scaffold_47-1575043694:469230..469367 | TCONS_00067454-exon-scaffold_47-1575043694:469230..469367 | Clytia hemisphaerica | exon |
| TCONS_00067454-exon-scaffold_47-1491911889:470255..470766 | TCONS_00067454-exon-scaffold_47-1491911889:470255..470766 | Clytia hemisphaerica | exon |
| TCONS_00067454-exon-scaffold_47-1510915933:470255..470766 | TCONS_00067454-exon-scaffold_47-1510915933:470255..470766 | Clytia hemisphaerica | exon |
| TCONS_00067454-exon-scaffold_47-1575043694:470255..470766 | TCONS_00067454-exon-scaffold_47-1575043694:470255..470766 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:469230..470766 + |
Blast
The following BLAST results are available for this feature:
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