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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067625 ID=TCONS_00067625|Name=TCONS_00067625|organism=Clytia hemisphaerica|type=transcript|length=2082bp
GTACAGTCGGCACTGATGTTCACGAATTCGAATTTTTCGACTGAATTACA
TTTAGCACAGAAGGAGTTTGCGTATAAACGACCATCGTCTCCTTTGACGG
GCAAACTCGCTGCAAGGGATTCGTCTCTGTCAATATTCGTGCAAAGATTT
TGATCCTCAGGTGATGAACCATATGGGCAAATGCGAATCATTGCTGAATT
TTTTGTTCGATGTCCCAAAGTGACTGCTTTAGGGTATACAGGTAGACATG
AATACTTCTCtgctttatcaactttttcGACGAGAGAGCGTTTATATGTT
TCGAGATTAACAGGATTAGTTTCATTCCAGAATGTATCAACACAGCACCA
ATCTCCCGTACATCCTTCGTAACAAGAACAACATCTCTTTCGCCTTCCCG
AACATAAATATTGTTCAAATCCTTTCTCCctctcaaattcaaattcattt
gatACTCCAAAAAACTCCCAGATGGGGaatttttgtatgtattttttcac
tttcatgTACCCTTTGGATGGAGTTAAATGTAATCTATGTGAATACTTTG
AAAGGTCTCTTTCATTGGGTAGATAACACCATTTATCGACTTTGCAACGC
GAAGGGCATTTCAGTTGATCTTGGGGTATAAATTGTTTCGTTTGAGAACA
TTTCAAACAATGAGGGTTGACATTTAAACCATCATGTGTGCTTGCTTGGT
ATAAATGGCATAAACGTTTGTCTTCGGCACTGCAATtggaattttcaata
tttctttgTAAACAAGTTTTAATACCTGGTTTCTGAATAGAGTTTCTCTC
GACTGAAATAATGCATTCTGTTTGTTGGTCAAGTTCTTCAAAAGTCAACT
CTTTGAGAGTACGATTCACTGCTACACATGCAGCTGAAATGTTCAAATAC
TCAAAGCGAGTGATATGATTACAAAGAGCACAAAACATNAGATATGAATT
GTTTCGTTTGAGAACATTTCAAACAATGAGGGTTGACGTTCAAACCATCA
TGTGTGCTTGCTTGGTATAAACGGCATAAACGTTTGTCTTCGGCACTGCA
GTtcgaattttcaatatttctttgTAAACAAGTTCTGATACCTGGTTTCT
GAATGGAGTTTCTCTCGACTGAAATAATGCATTCTGTTTGTTGGTCAAGT
TCTTCAAAAGTCAACTCTTTGAGAGTACGATTCACTGCTACACATGCAGC
TGAAATGTTCAAATACTCAAAGCGAGTGATATGATTACAAAGAGCACaaa
acatgttcttataaacataCTCGTCATCTCCCAAAACAGGGAATTGTTCA
TCAGTTCCTAAAACACATTTCTGACGAAGATTCTCGATACTATCTCGAGG
ACAAGCAACAACCATGTCTATCGTTTCGGTTTCGTGATTGCCAAGTGGTA
AAACTTTTTCACACGAAGTCGCTTTATACGTAttacttttgtcttcgaag
TTTTTTACATATTGTTCAATGGTGAGAGGAGGCAGTTGGTATTCGTTCCA
TAGTTTATCGATGCAGCATGTTCTATATTTCCAACAATCCTCTGTACAGT
CACAACAAAGAGGATAAGGTCCATAATCAACAAATCGACCCAATCGTCTA
CTACAGCCGTAATGCAACTCTAAGTCAGAGATAGTTGAATTGAAGAATGT
CTTGAATGGGAACGGATTGTATTGTAAAAAAATGGGCGATGCAGGTTGTG
GAGGTGTTCCGGGTCTTGGCGGGGGTGGTATCGATGGTGGTGAGAACGGC
ACTGTGGATGTCGTAGTTATTTGCCCAGATGAAGCTAACGGTAAAGAACT
TGTTAAAAATAGTGGAGGGTTTGTCGGTGGAACGGTGGCTGGCGATAGTC
GGTGCTGTGGAGTTGGTGGTGACGGTGTCTCTAAAAGTCGTTCGGCGTGA
AGTGTTGTGTTGAGCAGTGTATCAGGTCGAAGAACAGCGGTTGAATTTTC
TGAGTTTATTCCCAGTAATAAAAAGAACAAGAGAACAGTGATAGTGCGAT
AAATATGTAGTGTCTCAAGAGACAACATGTTCATTCTTCGTTTTACTTCT
GACAACATCAAATGACAGTCTATTGAGAAAAA Run BLAST on NCBI protein sequence of TCONS_00067625-protein >TCONS_00067625-protein ID=TCONS_00067625-protein|Name=TCONS_00067625-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
FFSIDCHLMLSEVKRRMNMLSLETLHIYRTITVLLFFLLLGINSENSTAV
LRPDTLLNTTLHAERLLETPSPPTPQHRLSPATVPPTNPPLFLTSSLPLA
SSGQITTTSTVPFSPPSIPPPPRPGTPPQPASPIFLQYNPFPFKTFFNST
ISDLELHYGCSRRLGRFVDYGPYPLCCDCTEDCWKYRTCCIDKLWNEYQL
PPLTIEQYVKNFEDKSNTYKATSCEKVLPLGNHETETIDMVVACPRDSIE
NLRQKCVLGTDEQFPVLGDDEYVYKNMFCALCNHITRFEYLNISAACVAV
NRTLKELTFEELDQQTECIISVERNSIQKPGIRTCLQRNIENSNCSAEDK
RLCRLYQASTHDGLNVNPHCLKCSQTKQFISXVLCSL Run BLAST on NCBI transcript from alignment at scaffold_471:449959..452040 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067625 ID=TCONS_00067625|Name=TCONS_00067625|organism=Clytia hemisphaerica|type=transcript|length=2082bp|location=Sequence derived from alignment at scaffold_471:449959..452040 (Clytia hemisphaerica)
TTTTTCTCAATAGACTGTCATTTGATGTTGTCAGAAGTAAAACGAAGAAT
GAACATGTTGTCTCTTGAGACACTACATATTTATCGCACTATCACTGTTC
TCTTGTTCTTTTTATTACTGGGAATAAACTCAGAAAATTCAACCGCTGTT
CTTCGACCTGATACACTGCTCAACACAACACTTCACGCCGAACGACTTTT
AGAGACACCGTCACCACCAACTCCACAGCACCGACTATCGCCAGCCACCG
TTCCACCGACAAACCCTCCACTATTTTTAACAAGTTCTTTACCGTTAGCT
TCATCTGGGCAAATAACTACGACATCCACAGTGCCGTTCTCACCACCATC
GATACCACCCCCGCCAAGACCCGGAACACCTCCACAACCTGCATCGCCCA
TTTTTTTACAATACAATCCGTTCCCATTCAAGACATTCTTCAATTCAACT
ATCTCTGACTTAGAGTTGCATTACGGCTGTAGTAGACGATTGGGTCGATT
TGTTGATTATGGACCTTATCCTCTTTGTTGTGACTGTACAGAGGATTGTT
GGAAATATAGAACATGCTGCATCGATAAACTATGGAACGAATACCAACTG
CCTCCTCTCACCATTGAACAATATGTAAAAAActtcgaagacaaaagtaa
TACGTATAAAGCGACTTCGTGTGAAAAAGTTTTACCACTTGGCAATCACG
AAACCGAAACGATAGACATGGTTGTTGCTTGTCCTCGAGATAGTATCGAG
AATCTTCGTCAGAAATGTGTTTTAGGAACTGATGAACAATTCCCTGTTTT
GGGAGATGACGAGtatgtttataagaacatgttttGTGCTCTTTGTAATC
ATATCACTCGCTTTGAGTATTTGAACATTTCAGCTGCATGTGTAGCAGTG
AATCGTACTCTCAAAGAGTTGACTTTTGAAGAACTTGACCAACAAACAGA
ATGCATTATTTCAGTCGAGAGAAACTCCATTCAGAAACCAGGTATCAGAA
CTTGTTTAcaaagaaatattgaaaattcgaACTGCAGTGCCGAAGACAAA
CGTTTATGCCGTTTATACCAAGCAAGCACACATGATGGTTTGAACGTCAA
CCCTCATTGTTTGAAATGTTCTCAAACGAAACAATTCATATCTNATGTTT
TGTGCTCTTTGTAATCATATCACTCGCTTTGAGTATTTGAACATTTCAGC
TGCATGTGTAGCAGTGAATCGTACTCTCAAAGAGTTGACTTTTGAAGAAC
TTGACCAACAAACAGAATGCATTATTTCAGTCGAGAGAAACTCTATTCAG
AAACCAGGTATTAAAACTTGTTTAcaaagaaatattgaaaattccaATTG
CAGTGCCGAAGACAAACGTTTATGCCATTTATACCAAGCAAGCACACATG
ATGGTTTAAATGTCAACCCTCATTGTTTGAAATGTTCTCAAACGAAACAA
TTTATACCCCAAGATCAACTGAAATGCCCTTCGCGTTGCAAAGTCGATAA
ATGGTGTTATCTACCCAATGAAAGAGACCTTTCAAAGTATTCACATAGAT
TACATTTAACTCCATCCAAAGGGTAcatgaaagtgaaaaaatacatacaa
aaattCCCCATCTGGGAGTTTTTTGGAGTatcaaatgaatttgaatttga
gagGGAGAAAGGATTTGAACAATATTTATGTTCGGGAAGGCGAAAGAGAT
GTTGTTCTTGTTACGAAGGATGTACGGGAGATTGGTGCTGTGTTGATACA
TTCTGGAATGAAACTAATCCTGTTAATCTCGAAACATATAAACGCTCTCT
CGTCgaaaaagttgataaagcaGAGAAGTATTCATGTCTACCTGTATACC
CTAAAGCAGTCACTTTGGGACATCGAACAAAAAATTCAGCAATGATTCGC
ATTTGCCCATATGGTTCATCACCTGAGGATCAAAATCTTTGCACGAATAT
TGACAGAGACGAATCCCTTGCAGCGAGTTTGCCCGTCAAAGGAGACGATG
GTCGTTTATACGCAAACTCCTTCTGTGCTAAATGTAATTCAGTCGAAAAA
TTCGAATTCGTGAACATCAGTGCCGACTGTAC Coding sequence (CDS) from alignment at scaffold_471:449959..452040 >TCONS_00067625 ID=TCONS_00067625|Name=TCONS_00067625|organism=Clytia hemisphaerica|type=CDS|length=1164bp|location=Sequence derived from alignment at scaffold_471:449959..452040 (Clytia hemisphaerica)
TTTTTCTCAATAGACTGTCATTTGATGTTGTCAGAAGTAAAACGAAGAAT
GAACATGTTGTCTCTTGAGACACTACATATTTATCGCACTATCACTGTTC
TCTTGTTCTTTTTATTACTGGGAATAAACTCAGAAAATTCAACCGCTGTT
CTTCGACCTGATACACTGCTCAACACAACACTTCACGCCGAACGACTTTT
AGAGACACCGTCACCACCAACTCCACAGCACCGACTATCGCCAGCCACCG
TTCCACCGACAAACCCTCCACTATTTTTAACAAGTTCTTTACCGTTAGCT
TCATCTGGGCAAATAACTACGACATCCACAGTGCCGTTCTCACCACCATC
GATACCACCCCCGCCAAGACCCGGAACACCTCCACAACCTGCATCGCCCA
TTTTTTTACAATACAATCCGTTCCCATTCAAGACATTCTTCAATTCAACT
ATCTCTGACTTAGAGTTGCATTACGGCTGTAGTAGACGATTGGGTCGATT
TGTTGATTATGGACCTTATCCTCTTTGTTGTGACTGTACAGAGGATTGTT
GGAAATATAGAACATGCTGCATCGATAAACTATGGAACGAATACCAACTG
CCTCCTCTCACCATTGAACAATATGTAAAAAActtcgaagacaaaagtaa
TACGTATAAAGCGACTTCGTGTGAAAAAGTTTTACCACTTGGCAATCACG
AAACCGAAACGATAGACATGGTTGTTGCTTGTCCTCGAGATAGTATCGAG
AATCTTCGTCAGAAATGTGTTTTAGGAACTGATGAACAATTCCCTGTTTT
GGGAGATGACGAGtatgtttataagaacatgttttGTGCTCTTTGTAATC
ATATCACTCGCTTTGAGTATTTGAACATTTCAGCTGCATGTGTAGCAGTG
AATCGTACTCTCAAAGAGTTGACTTTTGAAGAACTTGACCAACAAACAGA
ATGCATTATTTCAGTCGAGAGAAACTCCATTCAGAAACCAGGTATCAGAA
CTTGTTTAcaaagaaatattgaaaattcgaACTGCAGTGCCGAAGACAAA
CGTTTATGCCGTTTATACCAAGCAAGCACACATGATGGTTTGAACGTCAA
CCCTCATTGTTTGAAATGTTCTCAAACGAAACAATTCATATCTNATGTTT
TGTGCTCTTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00067625-exon-scaffold_471-1491911889:449959..452040 | TCONS_00067625-exon-scaffold_471-1491911889:449959..452040 | Clytia hemisphaerica | exon |
| TCONS_00067625-exon-scaffold_471-1510915933:449959..452040 | TCONS_00067625-exon-scaffold_471-1510915933:449959..452040 | Clytia hemisphaerica | exon |
| TCONS_00067625-exon-scaffold_471-1575043694:449959..452040 | TCONS_00067625-exon-scaffold_471-1575043694:449959..452040 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_471 | supercontig | scaffold_471:449959..452040 . |
Blast
The following BLAST results are available for this feature:
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