TCONS_00067693 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00067693
Unique Name	TCONS_00067693
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1315

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_472:361808..377421-

transcript sequence

>TCONS_00067693 ID=TCONS_00067693|Name=TCONS_00067693|organism=Clytia hemisphaerica|type=transcript|length=1315bp
ggataaaccaaataaacaATTCAAATGGTTTTTCACTCATTGCTAAGAAA
TACTTTCAAACAGAAATGTTGTAAATGTCATTTGCTATTGTTGCCCAAAC
ATTCGAGGATGGTCTCAAGCTATGGTATCCAGACTAACAAAGGTATATTC
GAAATTAAGAAATCGAAAAGGAACACTCATAAAGACATATCAAGTAATTT
ATCTTGGATGAaggataaaaaatatttagagtTTTACCAATGTGAGAAGG
CACTGCACCCTGTGAAACAACTATTAACTTTACATAAATTTGAGCAACTT
TCAAAGTCAACTTTATTGAAAGGATTTATCAAAGGTGAAGGATTTCTACC
AAGCGTTGTGCAAATGACCAACCAAATAGAATTCAACAAAGGGAATTTAG
AATTGGGTAAAACtgttttcgaaattttggatAGTGGTACATTAGCGATG
TTAAATGAACGTCAAGGAAACGAACATGATTATTATCACTTACAAGATTA
TGATGGACCACACCCAGTTTTTGAGGACCCAAAATTCGCACCGGTTTACA
AAAACTTTGATCAAGCGAAAACAAATCTATCCAagGTTTGTACTCGACAT
GAATCTTTGGAAGTCAAAAATATGTTGAATACACTGCTAAAGGAACCGAA
TACTATAGGTCATAGTCCTAAACATCCTTTCGTTGTTGTGGAAGGTCTTG
ATGGTACAGGGAAATCCACCATGACACAGAATTTGGGTAAATTTCTGGGA
GCTGAAATTCTCGGCACACCGCCAGCGTCGATCAAGCATATACGTAAATA
TTTTGACGTCTTTCCTGAATTATGCCGCCGTTCTTTTTACGCTTACGGGA
ATTACGTAGCTGCTGAAGAAATCATACAAATTCTACAATCACGTCCAGTC
GTTCTTGACAGGTATTATCACAGTACAACGGCTTACGCGATTGCTAAAGA
CTCTGGATTCGGAATCGAGAAACATCTACCGTCTAAAGGCAATCCTTTAT
ATTCATGGCCTAATGATTTGTTGCGACCCTCCGCCGTAGTGTTTCTTACG
ACAGAAGAGAAGGAGCGTGATGAACGAATGAATATAAGAGATGAACGCAC
TGCGGAGGAGAACGAGTTGAGAGATAGCCAAATGTTTCGTAAAAGGATAA
TGGAAGCATATCGTAGAATTAATTTGGAAGACGGCTGGGTAGAAGTCGAT
ACAGGTGGTACTCAAGAAGAAAGTTTGCAGAAAGCTGTCAATGGATTGAA
ACAGATTGGTGTACTTTGAGTTTGTAATCATTAGAGGTATATCgatcatc
aaattttaaaaggag

Run BLAST on NCBI

transcript from alignment at scaffold_472:361808..377421-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00067693 ID=TCONS_00067693|Name=TCONS_00067693|organism=Clytia hemisphaerica|type=transcript|length=15614bp|location=Sequence derived from alignment at scaffold_472:361808..377421- (Clytia hemisphaerica)
GGATAAACCAAATAAACAATTCAAATGGTTTTTCACTCATTGCTAAGAAA
TACTTTCAAACAGAAATGTTGTAAATGTCATTTGCTATTGTTGCCCAAAC
ATTCGAGGATGGTCTCAAGCTATGGTATCCAGACTAACAAAGGTATATTC
GAAATTAAGAAATCGAAAAGGAACACTCATAAAGACATATCAAGTAATTT
ATCTTGGATGAAGGATAAAAAATATTTAGAGTTTTACCAATGTGAGAAGG
CACTGCACCCTGTGAAACAACTATTAACTTTACATAAATTTGAGCAACTT
TCAAAGTCAACTTTATTGAAAGGATTTATCAAAGGTGAAGGATTTCTACC
AAGCGTTGTGCAAATGACCAACCAAATAGAATTCAACAAAGGGAATTTAG
AATTGGGTAAAACTGTTTTCGAAATTTTGGATAGTGGTACATTAGCGATG
TTAAATGAACGTCAAGGAAACGAACATGATTATTATCACTTACAAGATTA
TGATGGACCACACCCAGTTTTTGAGGACCCAAAATTCGCACCGGTTTACA
AAAACTTTGATCAAGCGAAAACAAATCTATCCAAGGTATATTTCAAAATG
ATTAATAGTTANTTCTTTCTCGCTATTTAGTTTTTATATTTAAAGTTTTT
TATCCTTAGCTGTTTTTTCTAAGTATCTTTAATACCGGGTGACCCACGAA
AAAGTTCAGACGTTTCCCGACGTCTTGAGGCCGAACAGATGTCCCAAAGT
GCTTGGAGTTTTGATATTTAGAAAGTAGATACCCTAACATAAAATTTGAG
CTATCACTTTTTAAATTTGACCAACTTGTTCTCTACTTATGAGCTTTTAA
AGTTAAAATTCACTTTTTGGAAAGTGTAAAAAACACGTAAAAAAGAGGTA
TTAAATTTATGCAATCAATTAGAAAATCACTTACAATTGACTTATTCAAC
GAGTTTTATGACATTAATAATTAATAAAAACACCTTTAAAAGTAACTTTT
GTTTAAAACAAAACTAGTTTTTATAAAAATTGGCGCTTTTGTAGATTTTT
CAGATTTTTTTCAAAAACTGTATATCAAAAACGTCTAAAAATACCAAATT
TGATACCCCTTTTTTACGTGTTTTTTACACTTTCCGAAAAGTGAATTTTG
ACTTTAAAAGCTCATAAGTAGAGAGCAAGTTGGTCAAATTTAAAAAGTGA
TAACTCAAATTTTAAGTTAGGATATCTGCTCTCTAAATATCAAAACTCCA
AGCACTTTGGGACATTTGTTCGGCCTCAAGACGTCGGGAAACGTCTGAAC
TTTTTCGTGGGTCACCCGGTATATATTGTACGAGTAGTGATAACTTGTCA
ATCGTCAACTTGACAAATAAAACCAAACCAATCACCCCCTACATTTGCAA
TCTGCAGTGTTCACATGTTTGTTCGAGCTAAGCCTCTCACTAGTGCCTTT
TTCTATGTTTTCTTTCGTTCTATTGTTTATTTCTCCTTCGTTGTTTTGAT
GAAATCAACATCAAAACATTCGAAAAAAGAATCGAACATTCATTCAAAAG
AACAACAAAAAAACTCGCTTACCAGACCACTTATGTTGAATGCGGTCTCC
TATTTCTATGTGTAAGATATTAAAGATACGGTGAATATCGTATCTCACTT
AGCCAATCAGAGTATTAATAACTTTCAGGTGGACAATAACAAACGTTATT
TCAACCCATCGACTTGAATGCCATCGACCACCAGGTCGAAGGCATTAACG
AGTTTGTGTATCTGTATTTTCTGTGACGGAAATGGTTCTGATTTGTCTAG
ATCCTGATCTACTGAGGACAATGGTAAATAAGCACTTTTACCGTCCTCTT
TATTGCGGTTCAGAATTACAGCTTGTTCCCAATCATTCCAGTCACTCCAG
TCACTCCTCCTTTCTCAAAGGGTAGATACATAAAACTCGCTATTGAATTC
GTTCGCCATTCTATTCGTTAAGTGAAGAATATAGATTAAATAAAACCAAG
ACTTGTTTCCGTCTACTTTGGATCGGGGGGGGGGGCGCTTAGGCAAAATT
GGGTACGGGGACGTGGCGCTGGTCAGGGTCTCTTTTTATGTCCCGAAGAT
ATCTGACTTTTCACTGACCATTCACGTTTCAATTTATTTATCCATATTTA
TTTTACACTTCTCTAGGTTTGTACTCGACATGAATCTTTGGAAGTCAAAA
ATATGTTGAATACACTGCTAAAGGAACCGAATACTATAGGTCATAGTCCT
AAACATCCTTTCGTTGTTGTGGAAGGTCTTGATGGTACAGGTAACTTGTC
TACTGAAAATCCAATTTTCGTGGAACTTATTTTTGCGTTTTTTTTTTGTG
TCTAACTATTTTTACTATAAATTCCGAAAACTAGCTGATTTTTTTATCTT
GGTCTTATGTCCCATGAATTGAAATGTAGAAAAATACCGATGGAAGACTT
TATTTTGCAGTAGCTTGCAAACAATGATTTGTGCTTCAACTCTACAGGGA
AATCCACCATGACACAGAATTTGGGTAAATTTCTGGGAGCTGAAATTCTC
GGCACACCGCCAGCGTCGATCAAGCATATACGTAAATATTTTGACGTCTT
TCCTGAATTATGCCGCCGTTCTTTTTACGCTTACGGGAATTACGTAGCTG
CTGAAGAAATCATACAAATTCTACAATCACGTCCAGTCGTTCTTGACAGG
TTTGTTATTTAAAATATCGAATTTAGATTTGATATACCTCTGATGATTAA
TGTTGCTTCGTTGGCATTTTAAAATTCCTTAAACATAATAAATTACTTGG
ACTTTTATAGGGATGAGCTGATGCTCAGATTTCCGATAAAGAAATCTATA
AATAAAACAAATTTAGACTTTCGTTCGATATCGAGTACCGGACTTAAGTA
TGATCCGGTATTAATTTGTAGCTGAATCAATAATGGCTGTAATTTGATGG
ACCTAGAACTGTAGATGTCCGTGTCGTGCTCGTTGAAAAGATATTTTGAG
TGAAATGTTATCAACTAGAAATGGGCTCTTCCAGAAAAAAATAGAATATG
GGGAGGAGGTTGAGGATATACGTTTTTTTGGAAATTTACCCCCCGGACAT
TGTGACTTCTAACCCCCTGGACAAGCATCAGTTGACCCCCTTGACATTCA
AAATTACCCTCATACAGAGCAAAGCTACCAAAAAACAGAGCAAGTTTACG
CCCCTGGACAAGGCCAATTTATAGATTTTTACTACCCCAGGACACTATAT
CCTCCACATTTTTTGGAAGAGCCCAATGGATGAAATTTAAATTAAAAATA
AAAAGCAATTGTGGACATTTTGGTGAATTTCTCATCGCATAATCGAATCT
AACAACTAACAATTATAGTGTAAAAAGATATTTTAAACTAACCCAAACGT
ATCACGTATAATATATGGTAACTTCTTATGAAAAATGTAATAACATATTA
CAAGAAAAAATAACATCAGACCAAAAATGATATTAGGAAAATATGATTTT
ACAACGTACCAATCAAGATTTTCTTTCTTCTTATAAAGGGCGTAACCACA
GCCAACCAATATGAACATGTAAAAGAAAAATAGATAAGTGGTCCTGGAAA
TGCCTCGTCGTAGAGGAGGGCNAAAAGAAAAATAGATAAGTGGTCCTGGA
AATGTCTCGTCGTGGAGGAGGGATATTTTGAAGAGTTTTTATGCTAGTTA
TTATTGATTGGTGCAGCATGTTCAGTTGAGCAAGAATCATTTCCATATCC
ACTTCAGTATATTCAATACTGGGGTCCAATGCCCTAATTGCGTTTTCTCT
AATAAGTCCATCAGGGGATGTCAAATTTTTTAATTTGTCTCTAAGTTTCT
TACACACATGTGCGCTATTTGGAGCATCTAAGTATTTGACGTGCAATGGA
ACAATCCATGAAGGTCCGTACTGAGCATACATACGTTCTTTAGCATCTTT
ATGGCAAGCAAGTTTCGCCGAGTCCATATAACAAGAGCACATGTCCCTCA
TTGTTGGTCTTGCACCTTCATCTGTCATCATCTCGTCTGCAATCCATTCA
TTGAAAACCATATGAACTTGTGGACATCCTTTCACTGTCCAATGGACTTC
AGCATATATGACATCTGGTGTTTGCCACATTGAAATGCCTTTAAAAACTT
TACGTAACTCGTCGTAAAGTATTCCTTGANTGACATCTGGTGTTTGCCAC
ATTGAAATACCTTTAAAAACTTTACGTAACTCGGCGTAAAGTATTCCTTG
TGGGATATCAACGTACATATCTACGTCTCCATCTGATGATAGACAAGTAC
TCTCTCTTAACACACCAAGCTCTGTTCCACTTCTAGGGAAATAGATGGCT
CCCATTCTATCCAACTGTTGCCATAACTGCTGGTGGATTTTCGAACATCT
GGTTGATTTTTTGCGCTCTTGTCCGAAAGTGCAATTCGGACGTATGAAAT
CAGGACCTGGTTTAATAGCTGGTCTCCACTTCAACCTTCGGTGGGGATAA
TCCGTATAAGTGTTTCTAGCGTTCGCATGCCACCATCTATGATAAAAGGA
GAAAGAAACTTTTGCTTGACTTCACGCCTTGTTATAGGAGTACGAGACTT
TGGCATTTGCCAACTCTTAGGTGTATTGAGAGATGCCGGGTATATATGTG
TAAGGATCGGGTTTTTACCATCCAAAGTCTACTTCTAGTGGCCCTTCATT
GAAACTATTCCTGAGCTGTCTAAAAGCTTTTGAATTTTTCGGAGCATGCC
ACTTAAAATATATGTTATTATTATTGTTGTTATTATTACTTAAGTTTTAA
CTGTTTATTATTTTTGATAAGGAAGATAGGAAAAGGATTTCTTTATATGG
TTGTTGAAATGAAGTTGAGACTGGTTAGATTATATAAGAATTAAATTATT
ATTAACCCTTTGGTGATTACCCAATGGTAACTTTGAATTTGAAATTGTCA
TTATTGGTCCCATAAGAGAGATAGAACTTATTACGTATAAAACGAGGGAG
GTTCGAGCTTTTAAGGGGGTCCTTTAAAAATATAAATGTGGGTGAAACCC
TCTACAATTCTTCCGTGGTTTGATAGAAAACATTTTCAACTGTGATGTGA
CTTTTCAGATCTAGTAGCTCTAGAGTTACAATTAAAGTTAGACTTTTATC
TTTTTAGTAAAGCAAATACCTAGTTTACTGATATTTAGCTTGGTCTCAGT
AGGTCGGAAGTTGCTAAAGGTTTAAAAATTTTATGAGTCTCGGGTATATA
CAATTGTCATGAACCTACCTCAAACATTTGTTAAACCATCTACCCCTGAC
TACACCTGTCAAATTAACGTTTTGTACATGATGTAAAAATCTTGGGTACC
ATTTCTCTTTTTTCACTCTGTTATTATTAAAATAACGTGGATAAGGACAA
TCTCCATTCCAGTTTTCTTCGTAGTAATCATCTGATTGGAACTCTCTACT
GCTGTTGTATTTTTGTTGCTTTCTGTTAAGAGGTTTTAACTCATTGTTGA
TATTTTCAGTTGTAGGTGAGGCTCTGGGTTTCTCAACTACCTTTCTCGTG
CTATGCAGAATCACCAAAGATAGGAGTAAGACAACACCTACAATTAAGAA
AATGTGCAATTTCCCTTTCATTTCTTATTTTCCTCGATTAATCAATTCCT
TTTTTCTCAGATACTGTCTAACAAATTTATCAGCATCCAGTATAATATAG
TATAATATATAATATAAATTATTCATTTAGCATTCACTTGAAAGTATTCG
GTATTAAATACTGAATACTTTCAAGTGAATGCTAAATATAAGTTTTGTAA
TATACCTAAAGGGAAGAAATTTTGCGGTTCACAGCTCATCTACTAAGATT
CGGAAGTTTCGCGGAATTTTATTTCGCGGTTGAGAGGATTTTTTGTTTAA
AATATAGCCTATTTTGCCTTGAAAAGACCAATTTTATAGGTTATTTTTTT
AATCATGAGAATATTCGTGTTTCGCGGAATTTAATTTCGCGGATTTGTCG
AAAAACTGCGCAATTAAATTCTGCGAAAATTTGTTTCCGCAAAAATCTTC
CCTTAAGGTACTAACTACTCTTAAAATTGTAAGAGATTTTTACTTTATTT
AATTTAAGTTTTTTAAAGGAAGCTTATCAGCACTAAATATTTAATCCCTG
GGTTAAACCCATCATGTGCTTTATTTTCCGTTTTTTTTCAAACAATATTA
ATACATTGTCGAAGCGACTAATTACCTTTTACCGCGTTTGTTACTATCTT
TTTCAAAATACATGTAATATAAAACTTGCAAAGTTGGGTATTGTACCTTC
AGAGCGAAGTCAAATTAATTCTCTTTCTTTGGGGTNAGAGCGAAGTCAAA
TTAATTCTCTTTTTTTGGGGTTAACCTACTTAAAGTATATAAGAAAATTG
TTACTATCTTTTTCCTACCTACTTAAAGCCTACCTACTTAAAGTATACCT
ATACCTACCTACTTAAAGTATATAAGAAAATAAAGTTAAGTACAGTCTTG
TTTTGTAAGCATAACGTTCATAAGTGCACTATGTGTGAAAATTAGCAAAA
AATAAGCATAGTGCTAAAAGCATACCATTCAAATTTTGTTTTGAAAATGA
GATCAATGAGATAAAAATATCAGATATCAGCCAAAATTGACCATGTTTTG
ACAACACTTTCATCTGCATAAAATGAACAAGCATAATTTGAGGATGAAAA
TTAAATTGAAACATGAAATCTTTGAAGCTACCCAAAACTTTATACGAACC
AAAAGCACGCCTATCGTTTCAGCCCGTTGACAGCTTTCTGTAAATTCCTT
TATGAATTCCACCTGTCTTGCTTTATGTTAGTTTAGAGACTTTCTTCGTT
AACTCGCTCATTCAATTTTTTTCTGATTTTATATACAAGAATGTTTAGCG
GTAAACCCTCAAGTGTGGTGCAGCCCAAATTTTTAAAACCATATTTTTGA
CTGATTTCACCTACAACGGTTAAAGAGTTTTACAACCTGACCCTAGTCAA
TTTTTTTTGGCCCAGCGCTAAGCGGTAGGCCTTTCATTTGCAACTTTCTG
TCCGTCTGTGGTGGATTCCGTCTGTGTGTCCGTTTTGGTAGAAACGGCGA
TTAAAACCAGTAACACGCTTTTTAATTTTGCTTTCTGGAGAGGGAAAAGC
TTGCTAAAGTCGGATATAAAAGATATATTTTCTGATTCTGCACTCCCTCA
AAACAATTTTCAAAACAAAACAAGATGGCGGTCGAAGCGAGGAGGTTGAT
TCATACTTTCTTGAACATTTTCTTTGCTTTAGTGGTCAAGAGACGTTCAA
ACGAAAGAAATTTTGTGATTTTTCTTTATAAACCTTTTTCGACATTATGC
CATATCTTATAGTCTTTGCTCAAGTTTTCATGAAGTTTTATGAGTGAAAA
TCCTACCTTAAATCACTTTCATTTTTAGTTTCTTATTTTCAAAAAGACTT
TATTTTTAGGAAATAATGGCTTCTGATATAGAAATAAATAAATTGAAATG
CTGCTCATGTGTAAATTTGAATCAGATTGGAACTTTTTTCTTGATGCTAC
ACAAGAAAACAGTCACTTCTGGATCTGTCGCTGTTAACTTTTAACAACGG
TCAGTGGTATGGTGAGACGTGGTATGATTTTCAAACTCGACACATAATTA
TTTCAAGTAAACTGATTCTGGAATTTGTTAATGGACACTAAAATGGGGAT
CATGTGTAAATTTGAACAAGATTGGAACTTTTTCAATGATGCTACGCGTG
AAAATGGTTTTTTCTGGATCTGTCTCGTTTGATGATTGGTGGCTTGATTT
TTCAAACTCGACACAGAATTATTTCAAATAAGCCGATTATGGAATATGTT
AATGGAGACTAAAATGCAGCTCTTGTGTAAATTTGAACAAGATTGGGACT
TATTTATTTTATACTTTTCTAGGTTTGTACTCGACATGAATCTTTGGAAG
TCAAATATTATGTCAAATGTTACAAATGATTTAAATTTCCAATATTCTTT
AATATATATATATATACTGTAGGATATACTGTTAAATTTCACTATGGTTT
TGGACAAATTTTAATGATATTTGATTGTTGTCACCTAACAAAATTGTTAT
ATCTTATATACAATAAATTCGAATAGAACATAAATGTTCACAGTCGCTTG
AACATTTGGAGAGTGAAGGAAGGTTATCTTTGCTCCATGGAGTTCGACTG
CCCCGGAGGCACAAGAGAACTGAACTCAAAAGAGCAAAGACCACCTTTCT
TCTAACCCAAGTTGTTGTGACTGACAAAGGTTCATCTCGTTTTTCGGATA
AAAGTTCACTGAGTCTTTTATAGAAGCACTTGGTTTCTCTTCCCATGCCG
CCCATAGCGGTTAAAACAATAGGAGTGAATGAGCCGTGCTCAATTTGTAA
AATTCTCGAATTGTATACGCGCTTCTTTTCTTTCTCGTTCGAGTCACATG
CTTTGGAAATAGTGGAATTCGAGAACCGTTTGGCGATTGGGTTGAAAACC
CTTACGTCAAAAAAATGCCTTCTGTCCTGAAATCCGAAATCCCCTAGCAG
CGATATCGAGACGAGCGTTGTCTTGAATGTTCNCGGTTCCCGTCTTCGCA
AACGCCGGTTAACGGTTTTGCTTGCACACCAAAAGCCTTTAAAATACTGT
TGACTTTGTGTCGAAACTCTCTCCTGACAAGGGGGTCAAAACTGGTTCGA
CCTTAACGTCTTTACAAACTTGTGCCAAGAGAGTTGCCGTGGTGTCACGG
ATTGAGTTGTGTCTCTGTGTGATAAATCCACCTTTTTTGCATGATAGCGC
GTGGTCCAAGTTGAATTGTACACCACATGCACAAGTGGTTGGTAGACGAC
TAAGTTGATGACCATATCGTATCTTAATTAAGTCCCAGAATGATTGTTTG
TCGATCTGGAAACCTTCATCTCTGATCAGGAGTGTCGATAGCCAGAGGGA
TGCTCCAGGTTCTTGATTTATTTCGATCAGTCTTTTCAACTCGTCAGATG
ATTGGCTTTTGATGGTGTCTAGCTTTTGACGGTTTATTTGATTTCGTTGT
TTCTTGAAAGACAACTTCAGTTTTTTGATCTCGTCATTGTCGATATCGTT
CAGATGGTTTTGTGTTTTGATGTTAGTCTGGAGCTGAAAGACAACTTCAG
TTTTTTGATCTCGTCATTGTCGATATCGTTCAGATGGTTTTGTGTTTTGA
TGTTAGTCTGGAGCTGTTGCGTGAGCGCTTGTGAGTTGGAGAACTCTTGT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGAATTTGGTGGTAACAAT
TTCGTCCAGTCTTTTGAGTTGTTCTTGGATGTTAGGAATCGTCCTCAGGG
TGAAGCTTAGCTTGTGCTTGTACCCTGATGGGAAGCATGTGTAAGCCTCT
TGTGGAGCAATCTTTGCAATCTCCGAAAGAGTCTCGATTTTTCTAATCCA
GGTGTCGACTTTTTCGTTGACAAATTCTTTGCGGTATTTTTCAGAACCAA
TGGCTGCCCCGAGGTGTTTCTTTCCCTCGGTGGTGATTTGAATGTCAGTG
CCTTTGAAGATCTGTTCCGCTTTTTCGAGATGTTCTTGCTTGACGATGAT
CCAGGTCTTTTCTGCTCGTTGGAAGTAGCCGTATTTGGGTCCCCAATGAA
CGATGGTGTCCCACATTCGTTTGAGTCCTCGAAGGGTGCCTCCTCCGAAG
ACATCGTCGGCATACCCAGCTGCTTTCGTCTCACTGTTGTGGTCGCGAAG
CTCTCAAACCGAGTGGTGGATGAGTGGGATTGTTACGATTGCGTATATTA
AGCCGGCTATAGGATCGCCTTGAGTGGTACCTTCTGAAGACGGGATTTCT
AGTCCCCCAATGATGAAGAGGCGGGATGGTGAACTGTATCAGTTTATGGT
GAACGTAGCAATGGATGAATATATGTTGAATACGGTGCTAAAGGAACCGA
ATACTATAGGTCATAGTCCTAAACATCCTTTCATTGTTGTGGAAGGTCTT
GATGGTACAGGTAACTTATCTACTGAAAAACTAATTTTCGTGGAACTTGT
TTTCGCGGGAACTAATTTTCGCATTTTTTGGGTGTCTAACTATTTTTACT
ATAAATTTCGAAAACTAGCTGATTTTTTATCTTGGTCTTATGTCCCATGA
ATCGAAATGTAGAAAAATACCGATGGAAGACTATATTTTGCAGTAGCTTG
CAAACAATGATTTGTGCTTCAACTCTACAGGGAAATCCACCATGACACAG
AATTTGGGTAAATTTCTGGGAGCTGAAATTCTCGGCACACCGCCAGCGTC
GATCAAGCATATACGTAAATATTTTGACGTCTTTCCTGAATTATGCCGCC
GTTCTTTTTACGCTTACGGGAATTACTTAGCTGCGGAAGAAATAATACAA
ATTCTACAATCATGTCCAGTCGTTCTTGACAGGTTTGGTATTTAAAATAT
CGAATTTAGATTTGATATACCTCTGATGATTAATGTTGCTTCGTTGGCAT
TTTAAAATTCCTTAAACATAATAAATTACTTGGACTTTTATAGGGATGAG
CTGATGCTCAGATTTCCGATAAAGAAATCTATGAAGGTTAAATAAAACAC
ATTTAGACTTTCGTTCGATATGGAGTACGTACCGAACTTAAGTCTGCTCC
GATATTAATTTGTAGCTAAATCAATAATGGCTGTAATTTGATGGACCTAG
AATCGTAGAAGTCCGTGTCGTGCTCGTTGAAAAGATATTTTGAGTGAAAT
GTGAAATGAGCTCTCCCAGAAAAAAAAAGATTATGGTGGGGGGGGGTNTA
GATGTCCGTGTCGTGCTCGTTGAAAAGATATTTTGAGTGAAATGTGAAAT
GAGCTCTCCCAGAAAAAAATAGATTATGGTGGGGTGGTGGAGGATATACC
TTTTTTTGGAAATTTACCCCCGGACATTGTGACTTCTAACCCCCTGGACA
AGCATCAGTTGACCCCCTGGAAATTCAAAATTACCCTCATACAGAGCAAA
GCTACCCAAAAACAGTGCAAGTTTACGCCCCTGGACAAGGCAAATTTTAT
GGATTTTTCACTACCCCCGGACACTATATCCTCCACATATTCTGGAAGAG
CCCAATGGATGAAACTAAAATGAAAAATAAAAAGCAATTGTGGACATTTT
GGTGAATTTCTGATCGCATAATCGATTCTAACAACTAACAATTATAGTGT
AAAAAGATATTTTAAACCATATCACGTATAATATATGGTAACTTCTTATA
AAAATTGTAATAACATATTAACAGAAAAAATAACATCAGACCAAAAATGA
TATTAGGAAAGTATGATTTTACAACGTACCAATCAAGATTTTCTTTCTTC
TTATAAAGGGCGTAACCACAGCCAACCAATATGAAGATGTAAAAGAAAAA
TAGATAAGTGGTCCTGGAAATGTCTCGTCGTGGAGGAGGGATATTTTGAA
GAGTTTTTATGCTAGTTATTATTGATTGGTGCAGCATGTTCAGTTGAGCA
AGAATCATTTCCATATCCACTTCAGTATATTCAATACTGGGGTCCAGTGC
CTTAATTGCATTTTCTCTAATAAGTCCATCAGCGGATGTCAAATTTTTTA
ATTTGTCTCTGAGTTTCTTACACACATGTGCGCTACTTGGAGCATCTAAG
TATTTGACGTGCAATGGAACAATCCATGAAGGTCCGTACTGAGCATACAT
GCGTTCTTTAGCATCTTTATGGCAAGCAAGTTTCGCCGAGTCCATATAAC
AAGAGCACATGTCCCTCATTGTTGGTCTTGCACCTTCATCTGTCATCATC
TCGTCTGCAATCCATTCATTGAAAACCATATGAACTTGTGGACATCCTTT
CACTGTCCAATGGACTTCAGCATATATGACATCTGCTGTTTTCCACATTG
AAATACCTTTAAAAACTTTACGTAACTCGGCGTAAAGTATTCCTTGTGGG
ATATCAACGTACATATCCACGTCTCCATCTGATGATAGACAAGTACTCTC
TCTTAACACACCAAGCTCTGTTCCACTTCTAGGGAAATAGATGGCTCCCA
TTCTATCCAACTGTTGCCATAACTGCTGGTGGATTTTCGAACATCTTGTT
GATTTTTTGCGCTCTTGTCCGAAAGTGCAATTCGGACGTATGAAATCAGG
ACCTGGTTTAATAGCTGGCCTCCACTTCAACCTTCGGTGGGGATAATCCG
TATAAGTGTTTCTAGCGTTCGCATGCCACCATCTATGATAAAAGGAGAAA
GAAAATTTTGCTTGACTTCACGACTTGTTATAGGAGTACGAGACTTTGGC
ATTTGTCAACTCTTAGGTGTATTGAGAGATGCCGGGTATATATGTGCAAG
GATCGGGTTTTTACCATCCATATATGTTGTTATTATTATTATTACTTAAG
TTTTTTAACTGTTCATTATTTCTCATTAGGAAGGTATAGGAAAAGGATTT
CTTTATATGGTTTTGATGAAGTTGAGACTTGTTAGACTATATAAGAATTG
AATTAATATTAACCCCTTTGGGATTACCCAATGGTAACTTTGAATTTTAA
ATTGTCATTATTGTCCCATAGGAGAGATAGAACTTATTACGTATAAAACG
AGGGAGGTTCGAGCTTTTAAGGTGGTCCTTTAAAAATATAAATGTGGGTG
AAACCCTCTACAATTCTTCCGTGGTTTGATAGAAAACATTTTCAACTGTG
ATGTGACTTTTCAGAACTAGTAGCTCTAGAGTTACAATTAAAGTTAGACT
TTTATCTTTTTAGTAAAGCAAATACCTAGTTTAACTGATATTTGGCTTGG
TCTCAGTAGGTCGGAAGTTGCTAAAGGTCTAAAGTTTTTGTGAGTCTCGG
GTATATACAATTGTTATGAAATGTTACCTACCTCAAACATTTGTCTGACC
ATCTATCCCTGATTACACCACTCAAATTAACGTTTTGTACATGATGTAAA
AATCTTGGATACCATTTCTCTTTTTTCACCTTGTTATTATTAAAATAACG
GGGATAAGGACAATCTCCATTCCAGTTTTCTTCGTAGTAATCATCTGATT
GGAACTCTCTACTGGCTGTTGTATTTTTGTTGCTTTCTGTTAAGAGGTTT
TAACTCATTGTTGATATTTTCAGTTGTAGGCGAGGCTCTGGGTTTCTCAG
CTGCTTTTCTCGTGCTATGCAGAATCACCAAAGATAGGAGTAAAACAACA
CCTACAATTAAAAAGACGTGCAATTTCCGTTTCATTTCTTATTTTCCTCG
ATTACTCAATTCCTTTTCTCAGATACTGTCAAACGAATTTATCAGCATCC
AGGATTTTGATAATTAAAAATCTGCTAAACATCAGAGAAAATAAACAGTC
CAGAGTAATTTCAACTATCATACGCATACACATCATACACATCATCTACT
TAAGATTTATGTTTGACAATAGAATAATACAATTGGATTAAAAAAGTTTG
TATTCATGATATGCACCATTGAAATGTCTTCTACGGAACTAACAGGTGAT
TGGTTGAAAGTGACGTATTGACTGACTTTACGTCACTTACAACCAATCAG
CTGTTGGGTTTGCGGTTTTCCTTTTTTTTTCAATCAATATTAATTACTAC
GGCTTACTTACGGCTAATTACTTTTTACCGCTTTTGTTACTATCTTTTTC
ACAATACATGTAGTATAAAACTTGCACAGCTGGGTATTGTACCTTCAGAG
CGAAGTCAAATTAATTCTCTTTTTTTGGGGTTAACCTACTTAAAGTATAT
AAGAAAATTGTTACTATCTTTTTCCTACCTACTTAAAGCCTACCTACTTA
AAGTATACCTATACCTACCTACTTAAAGTATATAAGAAAATAAAGTTAAG
TACAGTCTTGTTTTGTAAGCATAACGTTCATAAGTGCACTATGTGTGAAA
ATTAGCAAAAAATAAGCATAGTGCTAAAAGCATACCATTCAAATTTTGTT
TTGAAAATGAGATCAATGAGATAAAAATATCAGATATCAGCCAAAATTGA
CCATGTTTTGACAACACTTTCATCTGCATAAAATGAACAAGCATAATTTG
AGGATGAAAATTAAATTTTTCTAAGCATAAAGAGCCTCATATGCTTATAA
AGTAAAAAGAGTTTACCACCCCAAAAAATTACTAAAAAGGGCTTTTCCAG
AAAAAATTTTAATATGGGGGGTGGAGGATATAACAATTTTCGGTGATTTG
CCCCCATGGACAAGTGACTTTTGGCACCCCGGACAACGTGTTTTACCTCC
CGGACAAGTATTAGTTGATCCCCCGGACATCCCAAATTACCCCCGGACAG
GGCAAATTTACCCCGGACAATATAAAGATATTTTTGGGCAAATTTGGGCC
AAAAAACGGCTAAAAAACGGGTTTGGACTTTGTGAAAAACTGGATCATTA
ATTTTTTCTGATTTTTTGTATGAAAGTAGGTAAAAGATGGCTCAAGCAGA
TTTTTGTAAAAAACGAGATTTTTTTTTTTCAACAACAATAAAACACATTC
TCATTCGAATTCTATCAAATGTACAGTCTTGTCTCTTTTCATTTAATGTT
ATTATGTATGCAGACCTTCACACGCATCTACACTATTCTAATGATGTTGT
TGTTTAGGTATTATCACAGTACAACGGCTTACGCGATTGCTAAAGACTCT
GGATTCGGAATCGAGAAACATCTACCGTCTAAAGGCAATCCTTTATATTC
ATGGCCTAATGATTTGTTGCGACCCTCCGCCGTAGTGTTTCTTACGACAG
AAGAGAAGGAGCGTGATGAACGAATGAATATAAGAGATGAACGCACTGCG
GAGGAGAACGAGTTGAGAGATAGCCAAATGTTTCGTAAAAGGTTAGTGAA
TACTTGCGTAAATAGAAGTCGACGTATTTATGAATCTTCCTGTGATTCGA
ACAAAACAATGGATTATCAGGTTGGAAAATACTTTCCGTGCAATTTAAAT
CCTTTTCAAATTCATTTTTCGAATTCCAAATTTCCTCCCTTGAATTAGTC
AAACGGATTGATATCTTTCTACAAGGATTAAACCATTTGTGTGATTTATT
AGTGATAATTATAAAAAATTAATCATTTTTATCATCATCTTGAGTGAATG
ATCTTCTTCATCAAATAGGAAAGACATCGCTTTTTAACATTCTATTATTA
CTGACAGTAAGAAAAAATTTTTGGGCTAATTATGGTAAGTCCTTCATGAA
ATTTGAGCAAATTCTAAGATGAGCTCAATTTTCAACCTTTACAGGATAAT
GGAAGCATATCGTAGAATTAATTTGGAAGACGGCTGGGTAGAAGTCGATA
CAGGTGGTACTCAAGAAGAAAGTTTGCAGAAAGCTGTCAATGGATTGAAA
CAGATTGGTGTACTTTGAGTTTGTAATCATTAGAGGTATATCGATCATCA
AATTTTAAAAGGAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_042263	XLOC_042263	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_472	supercontig	scaffold_472:361808..377421 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	5.1409e-05	9.52346e-09	0	1.34816	0.742912	3.36617	2.91559	1.86404	1.79243e-08	0	1.99711e-07	8.49949e-06	0	0	0	3.71757	3.20146e-06	0	1.75064	0	0	0	0	2.89061	5.55155	1.01618e-05	0	1.36852e-09	7.98608e-08

Blast

[Close]

BLAST of TCONS_00067693 vs. Swiss-Prot (Human)
Match: CMPK2 (UMP-CMP kinase 2, mitochondrial OS=Homo sapiens GN=CMPK2 PE=1 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 1.207e-38
Identity = 92/245 (37.55%), Postives = 144/245 (58.78%), Query Frame = 1

Query:  511 HPVFEDPKFAPVYKNFDQAKTNLSKVCTRHESLEVKNMLNTLLKEPNTIGHSPKHPFVVVEGLDGTGKSTMTQNLGKFLGAEILGTPPASIKHIRKYFDVFPELCRRSFYAYGNYVAAEEIIQILQSRPVVLDRYYHSTTAYAIAKDSGFGIEKHLPSKGNPLYSWPNDLLRPSAVVFLTTEEKERDERMNIRD-ERTAEENELRDSQMFRKRIMEAYRRINLEDGWVEVDTGGTQEESLQKAVN 1242
            HPV  D   + V+ + + A+  L + CT     E + +L+ + + P  I    K   V +EGLD TGK+T+TQ++   L A +L +PP+ I   RK FD  P + RR+FY+ GNY+ A EI +     PV++DRY+HST  YAIA +   G++ HLP   +P+Y WP DLL+P  ++ LT   +ER +R+  R  E+T EE EL  + +FR+++  +Y+R+    G   VD   ++E+ LQ  ++
Sbjct:  201 HPVVPDLPSSVVFPDREAARAVLEE-CTSFIP-EARAVLDLVDQCPKQIQKG-KFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPTIIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQ-HLPPAHHPVYQWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRME-NPGCHVVDASPSREKVLQTVLS 440

The following BLAST results are available for this feature:

BLAST of TCONS_00067693 vs. Swiss-Prot (Human)

BLAST of TCONS_00067693 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CMPK2	1.207e-38	37.55	UMP-CMP kinase 2, mitochondrial OS=Homo sapiens GN...	[more]

You are here

TCONS_00067693 (transcript) - C. hemisphaerica