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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067874 ID=TCONS_00067874|Name=TCONS_00067874|organism=Clytia hemisphaerica|type=transcript|length=659bp
GACAATTAATTGTAGGGTGGCTTATACCAAGGTAGCATATTATTCTCTTT
AGAAAGCAGAATTATCAGGTCGTGGAAACCAACGCTATCTGCCGTAAATA
GGGCGTAAATATCGAGCTCTATAAATTTTCTCTAccagtaaaataaaaat
cagATAAATAGAAAACGCAAGGAAAAGGTTTAACAACCTATTgcaaacat
gtcaaagaagagCCGCTACTTATACACGCCCCTCATACCGCCCACGAACA
ACAACAATGGCCAACAGCAATCCTTTCATCAAGAAAGTGAATCTGAGAAT
GAAGAAAAGTCAAACACGACGTTTTTTTCGCTTTTCTCCAATTTAAGTCA
AATTTCATTCCCTGCGGCCGGCATTCCAATACAAGAACTTAGCGAAATAG
CACCAGGACCTCCAGACTTTGACCTACATGAAGTTTATTTCCCaaaagaa
atttgcaaaaagCAGGTACGCAGGAAGCAGAAAGGAGCATGTGCAGTCAA
TTCAACACAAAGACCGAACAGCGACGATATCAAATTCGATCTcatcttca
aaacaaaagattgcAACAACATAGTAGCTGATATTGATGTCAATGTATTC
AAAGTCCATAACAAAGCTCAGTCTCGCGTCAAGTCATCATGGAGATGGGT
TAATAACAC Run BLAST on NCBI transcript from alignment at scaffold_477:91472..92894+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067874 ID=TCONS_00067874|Name=TCONS_00067874|organism=Clytia hemisphaerica|type=transcript|length=1423bp|location=Sequence derived from alignment at scaffold_477:91472..92894+ (Clytia hemisphaerica)
GACAATTAATTGTAGGGTGGCTTATACCAAGGTAGCATATTATTCTCTTT
AGAAAGCAGAATTATCAGGTCGTGGAAACCAACGCTATCTGCCGTAAATA
GGGCGTAAATATCGAGCTCTATAAATTTTCTCTAccagtaaaataaaaat
cagATAAATAGAAAACGCAAGGAAAAGGTTTAACAACCTATTgcaaacat
gtcaaagaagagCCGCTACTTATACACGCCCCTCATACCGCCCACGAACA
ACAACAATGGCCAACAGCAATCCTTTCATCAAGAAAGTGAATCTGAGAAT
GAAGAAAAGTCAAACACGACGTTTTTTTCGCTTTTCTCCAATTTAAGTCA
AATTTGTAAGTTATTTTCATTATAGTTGACTTTCTCTTAGGCTttctctc
ttattcgatctaAATAGAATTTTTCGAACTAGAGAAATATTTGAATTGCA
GAAacatttgaattagagagagtttatGGGAAGCCATTTTTGATAGCTAC
ACTTCAGTAGCTTTTTCTAcctattttttgtaaaatcctTAACTCTCAAT
TATTTTAGCATTCCCTGCGGCCGGCATTCCAATACAAGAACTTAGCGAAA
TAGCACCAGGACCTCCAGACTTTGACCTACATGAAGTTTATTTCCCaaaa
gaaatttgcaaaaagCAGGTATGACATTGTGCATCAAACTctactatttt
tattttttatgaaaactttATAATAAAGTGGCGCCTTCACACAAGAAGAC
ATTGCTTGCTTCAACGTGTTAGAAAGtcacttttgggctaattgataaat
ttattttattcaagtatttcaattcgggaggggtttatagacttccaggc
tatattctgagccctaatgtgctatttttgaatttttggatcCTCAAATC
CTAAGCTCCagagtcttaagtctagcgtttaAACTCAGAGTTAAGACTCT
ACCCTCCCAACCTATTTTAGAGCgctccttttttcgcacctataaacaat
agaaaaatgtgtcaaaaaaggattggatcgagtttagggggataattaaa
taattaagtgcctgaccgcgcgactacggtcaaaaaggtgtattataagA
TTCTTTATGTAATTTATACAGGTACGCAGGAAGCAGAAAGGAGCATGTGC
AGTCAATTCAACACAAANCCTGACCGCGtgactacggtcaaaaaggtgta
ttataagATTCTTTATGTAATTTATACAGGTACGCAGGAAGCAGAAAGGA
GCATGTGCAGTCAATTCAACACAAAGACCGAACAGCGACGATATCAAATT
CGATCTcatcttcaaaacaaaagattgcAACAACATAGTAGCTGATATTG
ATGTCAATGTATTCAAAGTCCATAACAAAGCTCAGTCTCGCGTCAAGTCA
TCATGGAGATGGGTTAATAACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067874-exon-scaffold_477-1491911889:91472..91826 | TCONS_00067874-exon-scaffold_477-1491911889:91472..91826 | Clytia hemisphaerica | exon |
| TCONS_00067874-exon-scaffold_477-1510915933:91472..91826 | TCONS_00067874-exon-scaffold_477-1510915933:91472..91826 | Clytia hemisphaerica | exon |
| TCONS_00067874-exon-scaffold_477-1575043694:91472..91826 | TCONS_00067874-exon-scaffold_477-1575043694:91472..91826 | Clytia hemisphaerica | exon |
| TCONS_00067874-exon-scaffold_477-1491911889:92030..92139 | TCONS_00067874-exon-scaffold_477-1491911889:92030..92139 | Clytia hemisphaerica | exon |
| TCONS_00067874-exon-scaffold_477-1510915933:92030..92139 | TCONS_00067874-exon-scaffold_477-1510915933:92030..92139 | Clytia hemisphaerica | exon |
| TCONS_00067874-exon-scaffold_477-1575043694:92030..92139 | TCONS_00067874-exon-scaffold_477-1575043694:92030..92139 | Clytia hemisphaerica | exon |
| TCONS_00067874-exon-scaffold_477-1491911889:92701..92894 | TCONS_00067874-exon-scaffold_477-1491911889:92701..92894 | Clytia hemisphaerica | exon |
| TCONS_00067874-exon-scaffold_477-1510915933:92701..92894 | TCONS_00067874-exon-scaffold_477-1510915933:92701..92894 | Clytia hemisphaerica | exon |
| TCONS_00067874-exon-scaffold_477-1575043694:92701..92894 | TCONS_00067874-exon-scaffold_477-1575043694:92701..92894 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_477 | supercontig | scaffold_477:91472..92894 + |
Blast
The following BLAST results are available for this feature:
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