TCONS_00068076 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068076
Unique NameTCONS_00068076
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068076 ID=TCONS_00068076|Name=TCONS_00068076|organism=Clytia hemisphaerica|type=transcript|length=156bp
CTGCAAACTAAAAACAATAACCccaaaaataatataatttttttaatata
aaattcaaaaatattatcataAAAACGTTCCTTCTTTAGGTGCATCCATT
TGGAATCTACAATTTTTCATCGTCGGAAATTTAAGCAAAATCATTTTTCC
TTGGTG
Run BLAST on NCBI

transcript from alignment at scaffold_478:770583..770738

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068076 ID=TCONS_00068076|Name=TCONS_00068076|organism=Clytia hemisphaerica|type=transcript|length=156bp|location=Sequence derived from alignment at scaffold_478:770583..770738 (Clytia hemisphaerica)
CACCAAGGAAAAATGATTTTGCTTAAATTTCCGACGATGAAAAATTGTAG
ATTCCAAATGGATGCACCTAAAGAAGGAACGTTTTtatgataatattttt
gaattttatattaaaaaaattatattatttttggGGTTATTGTTTTTAGT
TTGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042503XLOC_042503Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068076-exon-scaffold_478-1491911889:770583..770738TCONS_00068076-exon-scaffold_478-1491911889:770583..770738Clytia hemisphaericaexon
TCONS_00068076-exon-scaffold_478-1510915933:770583..770738TCONS_00068076-exon-scaffold_478-1510915933:770583..770738Clytia hemisphaericaexon
TCONS_00068076-exon-scaffold_478-1575043694:770583..770738TCONS_00068076-exon-scaffold_478-1575043694:770583..770738Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:770583..770738 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068076 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top