TCONS_00068312 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068312
Unique NameTCONS_00068312
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1402

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068312 ID=TCONS_00068312|Name=TCONS_00068312|organism=Clytia hemisphaerica|type=transcript|length=1402bp
cggatgtatatgaaagaggaaaagaaaaacatttttttgcttatatctga
ttaatataacaataaacagacactgtcctgatatgaaatatgtgtctaat
atgaaacgggaacacctATGTGAAAATAAAACCATTAATAACAGATTCAC
TTAATAACTTGTGACGTCAGAAAAGTGGtgtattttatactttttatgtT
CTTTCAGGTAAgcaattgaaattatttttttccatgtcgaatgCCTTTGC
ATTTTATAGATGTCAGCTGAACGTCGGTCCTTCCAACCGAAACCTTCCTT
GGAAACGAACAAACATTCTCACCTTGCTGTGCGATGATTGGGTTGGCTAC
CAAGTAACCTATGGCAACCAAGATGAATGTCCAAAAGTTCATCCTGGATA
AATTTCCCTGTAACGAATTCAAACGTGTGCACTCAATCGCACTTTGAGTC
CTACTTGACAACGATCACTCTGTCAAGAACAGTTTATCAGCAATACCAAA
TCTCTTGTGGATGGTGGGGCTCGTCGACCTGTTACAGAACAAGAACTCAA
CGTATCTCTTATTATCAACAAGTAACGAGGTACAGAGTTGTATACCAGGA
TATTTGTTGCCCTGGTTGGGCCCAGCAAGGTGATAGCTGTCCAATTCCGG
TGTGCAACCCTGTTTGTGTGAATGGAGAATGTGCAGCACCTTCCACTTGT
TCTTGTCAACCTGGCTTTGATGGAAGTCAGTGTGAAAGTGATATTGACGA
GTGTGCGTTAGGATCCGACGGATGCCAACAAAATTGTGTAAACACCGAAG
GGTCGTTCAATTGTACTTGTAATCCTGGATACTTTTTGTCTTCTGATAAC
AAAACTTGTGAAGATATTGACGAGTGTGCGTTAGGATCCGACGGATGCCA
ACAAAATTGTGTAAACACTGAAGGCTCGTTCAATTGTACTTGTAATCCTG
GATACCGATTTTCTTCTGATAACACAGCTTGTGAAGTTGATATATTGGCT
ATGATTGCACCATGGTCGAATTGGACAGATTGGGATAAGCCCTGCGGAGG
AGGTTTTCAGTTCAGAACATGAACTTGTGACCCTCCACCGCCGTTTCAAG
CATTGTGTGCAGAACACGGGGGTGATGAAGAAAAACGTCTTTGTAACACA
GATATCCTATGTCCAGaaatgtgtTCGAAAATGAAATCAATTGATTGTTC
GAGTGTTGTTGACATTTATGATATGGCCATCCTTAAAACGAACCACTCAT
ATATTGGAATGAACGAGACATCAGTCAATTCGTCTTTGGTTGCCATAGCA
ACATGGAAtactcaaaaaattcaaagtcttTGTAAAGGTAttgttttttc
tacatcaatatGATGGACGCTATAGAATAACTTATCTGTTATTATACATA
AA
Run BLAST on NCBI

transcript from alignment at scaffold_482:393956..409398-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068312 ID=TCONS_00068312|Name=TCONS_00068312|organism=Clytia hemisphaerica|type=transcript|length=15443bp|location=Sequence derived from alignment at scaffold_482:393956..409398- (Clytia hemisphaerica)
CGGATGTATATGAAAGAGGAAAAGAAAAACATTTTTTTGCTTATATCTGA
TTAATATAACAATAAACAGACACTGTCCTGATATGAAATATGTGTCTAAT
ATGAAACGGGAACACCTATGTGAAAATAAAACCATTAATAACAGATTCAC
TTAATAACTTGTGACGTCAGAAAAGTGGTGTATTTTATACTTTTTATGTT
CTTTCAGGTAAGCAATTGAAATTATTTTTTTCCATGTCGAATGCCTTTGC
ATTTTATAGATGTCAGCTGAACGTCGGTCCTTCCAACCGAAACCTTCCTT
GGAAACGAACAAACATTCTCACCTTGCTGTGCGATGATTGGGTTGGCTAC
CAAGTAACCTATGGCAACCAAGATGAATGTCCAAAAGTTCATCCTGGATA
AATTTCCCTGTAACGAAGTAAGCATTTTTTGTATTGCACTTCTATGCTTT
GTTTTCGTCAATTCCAAATCTGACACTTTCATTGCATGCTCAATACCTTT
ATCCGCAACGGGAAGCCCGGAAGAGTAATCAGTCTATTCGATCATTTAGT
CGTAATAAATTCGCGACCCGATAGTCGGAAGTGACCGTGAAAAAGGGTAG
ATTTGGAATAATATCAAAAAATAATAGCTCTACAAACCTTTCAATAAAAT
GTACTAATGTCTTTCTCCGTTTCGTATGAAAGCCTTCTCTTCCTAAACTG
TTCTTAAAAGTTTGTTGTCAGGGCCGCATCTTTATATGACCTTAATCACG
ATTTTCATGACATAATGTTTTATGCGGAAACACACGAAAAATACCGGGCG
TTTGCAACCAGTTTCATTGATTAAATTCAAAGCTGATGACAAACGCCCGG
ATGTTTCCGTATGAAATATTACGTCTGATGTCAACAATCACGATTTCGAA
TCGTGAAGAAGACAGCACTTCTCACGTGTTTCTTCAGGTCATTTGTACAT
GACAAACTTTACAAACCTCACAAATAATCAAATTTATTTAGAGAGGTAAA
TTTGTTTGGTATTTTTTGCAAGGCTGTTTTTACACCTGTACCATAATTCA
CATATTTGTTCACAAAAAAATTAAATCTTACAAATCTTGCAAATAACATA
ATATTTTGAATGATGGAATTTAGTAACAAGTTTGTTTTTGGTTTATTTGA
CCTGGCTTTTTACACCTATAATAAACATATTGAAATACGTATTTAAAAAA
CTCCATCACGTTACATACTATGAAAAACTATTCTAAAGCCTTGACACGTT
TTACAAAAGAAATTAAAAGATAATCGAATTTTGGAATATATGTACACTTT
ATATAAAAATGTGTCCGCTCTTTTGGTGACACACTGTACCACCTTTAAGG
CGAGTCTGTATGTCTGGAAATCGTCTCCATCTTTGACGAGGTGGTACTAT
TATTAAAGCCTGCACCAGAACTCATAAATTTGTTCCTGCAGAATAACCCA
GTCATTGTTTCTCTGATTGCTTTGGACATGAAGAAGCAGATAAGAGCATC
ACAAATATACCCAATACCAAAACATAAGCCAATCACAAACAGCGCTTCTT
CTGGCAATTCGAATTCTGTCAAGATGGCAACGGTCAATATATTGAAGGGT
ATCACACAAAACAAAAGGAAAGTTAGGATGATGAGGACCGGTAGATTTAT
GAAATTTCGAATCCCTATGGAAATCGGGATTGCTGGAGTTCCTGTCTCAT
TCCGATTTAAGCCATCACGAATGGTTTTCACCGAGTTTTGACTCTGCTTC
ATTTTATAGATGATGTAAAAATACATGGGCAATGAAAACGTTAATAATAT
CCATTGACAGATTGGATTTAATAAAACTATATTAATATAACGAATTTCAT
GATAGCTTGTAAAGACTGTCAAATGAGTGACAACAGCTGTGAGAGGGAGT
ACAAACAAGATGGCCAAAATAACACAAGTTCGTCTGAAAGTCATCAATAC
GTCATACTTGATATTTAAGTAAATTTCCAGGAATCTATTGACAGTGATAA
AGCCCATTAACAACAAGTACCATATCGAGAATCCAGTATTCTGGACCGGT
TCAAGCATAAAAAACCATTCGCTTTCATATGGTACTTTGTTCATGAGAAA
AATACGACGTAACCCGTATGTAAATCCGGTACCGGACTCGCACAAGCTTA
GATTAGCTAGATACAATCTTTTGACAGTACTGATTCTTGATCTCGGTGTC
TTGTACAGGACGAATAAACAGAATAAATGAATCACAGATGACATCATGAA
GACGAAGATTTGCCCGGTGTAATAAATATCTGCATGTTGTACTTCGGTTA
AGTTTTGGAATTGTTTTTGATTCATCGTGGTGATAGCGATGTCCCTGCTT
TTGTTTACGATTTCACTAGAAGATTCATTTTGATACACATATTTAAACAT
GGTGATATGGTATAAAACTATAAGATAACCGCTAAACTGCATTGTATCTA
CAGATTCAGGCTACTCTCTACATAGCTGCTTGTAATAATGATGTTTTAAG
TAAGACCCTAATGATAAAATGTATTCTTAGTTTATCTCAGGCTACTGAAA
ATTGGATGAAAAGTTGTTTTTGTTATGGCAGATGTATAAGTGCTAATAAT
CGTCCTATTTTATCACAAACCGACTTTTGAAAAAAGAATTTTGAAAAAAG
AATTTTTTCAAATTCATTTATTTCTTTTGAACACTCAAGAAGTTTCTTCT
CAACTTCTTCAACCTATTATCCGTCTCCAGGGGTTTTCTATGAATTGGTT
TTGAAGAACTCATGTCCAAAAATTTTTCCAAAAAAGGAGATATTGAAAAC
TTAGACAGTAAAGGCAACTTAAAGTTCATCATTTACCATATCAAAAATTC
TATTTAATTTCCTCAATCTGCTATCTTACTATCTTATTCAAAAACGATAT
TTTATTTGAAGAAGAAACCTATACAGTACTATCTACTTTTTACCAATAAG
TATTTTTTTAACTGATTATGAAATTTTTCGAGACAGACTTAACATTACAT
TGACGAAACTAAAACTAGACGAATATGAAAAAGAAAAATCAAAAATTAAG
ATCTTTTTTCAATCCACATGAAAACTGATCCGACACCTCTCTCTTCGTAC
TAATAAAACGTGAAATTAACAGATAATTATTTCCCCATGGTAATATTAAA
ATCCGTACGGATCTATCCTATTTGCCCTGTGGAGGAAAAAGTCACGATTT
ATTGCTTAAATTAACATCTCCATTCTGTTAAATTTAATTGAAATAGTGGT
TTGTATTAAAAGGGGAGAAAGTTTTTACAATTGTTTTGAAAGGTGTATCC
AGGTTGGTTAATAGGGCATGAAATTTTAATGCCTTCTTAAAATTCGTCAA
TGTTCATTTATATGAATAATTCAAAAAACGTTTTCTAAAGTTAGAACTTC
AAAAAGGATTTTTTCTTTATTTGAATTGATTGTTGATAAATATATCACGG
AAATCTCAGAATGGGGCAAATTTCATCTTCATCTTTAGAACTAGTCTAGC
AAGCTAGACGACTAATTCAAACATGCTAGAAATAAATCAAAAAGTAATGT
AGGGAACAAATTTAGGCCATTTAGTCGTCCAGAAACCTTTGTGCACTAAC
TCCAAAAAAAGAAAAGTGTCAATATTGCAATTTATAATTTTTTCCCGCTC
AAAAGAAATTCTAAAAAAAAAATGTGTGTGGATTTGTGTGTTAAAAGTTT
TTCATTTGAGTTGATTTTGTTTTGAGAGTTTTTTGTTGCTTGATAAATTG
TTTTCTCAAATTTCTAGCCGGGGTATCTATAAGGCCGGTACACTGGATTC
TTCCATTTGTTTATACAAACTAAATCCCGTAACAATAATCGTATTATCAT
ATAACGCATATACTACTGTATTACACGCATTATAAACGACTCAAGTCTAC
TTATAGAGCAGATCTGAAATTTCAATGATTTGAAAGAGTTTTGTTCTTTT
CATTTTGAGCCTTTCGTTATAAACTTCTTAATTCTTTTTTTAATCATCAA
AAGCATTCTATTTATCCTGATGACACAGTAGACTCTCGCTTTTTCGAACT
TATATTATTCAAATCTTTCTATAATATAACTTAAACTTATTCCTGGTCCC
CTTCAAGGAGGAACCCTTTTAAAACACTTTCAATAATTGGAATCTCCTTG
TGATTCTAACAAATAAGATACCCCTTTGTAAGTGGCATACTTCGCTTGGT
AGATTGTTGGAAAAATCAATAAAATTCTAATATCTTTATCAACATTTTGA
ATGTAAGGAATGATAGTAGACAATTTTCATCTCACGCTTTGAAGGGTCAG
ATGTGAACGCCTCTTTAAAAGTTTAAATTTCAAAATCTTGGCCTCTAAAA
CGTCGGCCCATTTTTACCTGCCCAAATTTCTAATAAGGCTAACAATGAAC
GAAAAAAGGACTTAAAGGTTTTTTTTTTAGTGTTCCCGTTTCATATCAGA
CACATAATTCATTTTTTTCCTCTTTCTGACCAATCTTTCTCTACATCCGT
GTCAATCCAATGTGAAAAAAGCTTGTGAATTAAAATTGATAAGTAAGCAA
ACGTTATCACTCTTCTTTCTTAGGAATCGATTCTCTATATGTACATGTAT
TGGATTTCCTAACGCAAATCCTGAAAATTTCATGCGATTCTCGTTATTAT
AAAATATATCCAAATGAAAGCTGCGTTTTCATGAAAGGGGACGATAAATA
ATATTCTCGATTTCGAAATTTCTTCAGCTTTTTTCGGGACACGCTGTATC
GGCATTTGAGTCAATTTTTTTGTTTATTAGCATAATTATTATCTTAATGA
ATCAATTATGTCAAGGTTACGCGACCAGGGGACAACTTATACTTAGGGGA
TGAGACAGTAATTAAGGTATTATGCTTGAAAGAAAGAAATTGACAATAAT
CTTCTTAGGCGTGGTTGCATGGTGTTTGTTGCTGAATTAAAGGGTTACCT
TCTTACTCCAGCCTTCATTTGCAGAGAGGAAGAATTTTTGAAGTTTATGT
AAAAAAAGTTATTCTTTATTTCATTTCACAGTATAGATAGATAGATGGAT
AGAGTCGATATTTTACGTGGATAGCCCAGTAATCTCGGACTTTTAGCCAG
TCTTTTGATTGTGTTTGCACGGGATCAACGGCCAGCCGGATCGGCTATCT
ATGCCATCTTTGAACTGAACGGAACATTGGAAGGAGCGGGGATTCGAAGC
ACGAATTCCTGGTTTGAGACGCTGACGCAAACGCAGTAAACAAGCATAAG
GAATAGTCTTTTGTTTTTTTTATGGCCTGCTGTTCTATTGTTGTTTTAAT
TGAATCAAAGTGATCCGTTGGTACCAGGAAAGTTAGTGTTCTGCAAATTT
TCTTTGATTTTTACCTTCGGTTATTTACTTTGAGTCTTTATTTCTGTTGT
CAATTCTGGTACTGAGCTAGTAGACAACGTTTTTTCAGCGTTCATCTAAC
GTTATATGGCCGTTGTGAACATTATCTGAACGTTAAAACAACGTTGATTC
GCCAGCTTGATATGCAACGTTGTTTGAATGTTTTATGGACTTTCTTTTAT
GCACGGTTTGTGTCAGATGGGAAAACGTTTTAAGTTAAAGATAGGTAACG
CCTTTTCTGTTCATTCATTTATGTGGACAGGTTGCTTTTCCAGCATTGCA
CCAACACTTACTATAAAATGCTTAGCTAAGAGAATTTTCAAAGCTTGATG
CGGAAACATTTAAGCTAATGGAGATGGAATGGTAATTATAGAGATTTAAT
TTGTTGAATCCATTCGCCATAGTTTATAAAAAATCAAAATTTATTTCACT
ACATAAAAATAGAAGCTTTTCGGCTTACGCCATCGTCAGTATACAAGATT
TAATTTATCAAACGCTTTATCTCTTTTTTCCGCTGAATTTTGAAAAAGGA
AAATCTTTTCAATTATATCATATAATTTCATTTAATTTCAACCATTTGAG
GTCAAAATCGTCTTGGTTGACGGTCAGGGTGATGATGGCAAGAACTTTTA
TTCTGTTTTGTTTTTTATATTGTTTGATGGAAATCGTGGANGTAGAGTCG
ATATTTTACGTGGATAGCCCAGTAATTTAGGACTTTTAGACAGTCTTTTG
ATGGTTTTCACGGGGTCCACGGCCACCGGGCTCGGCTATCTTTGCCATCT
ATGAACTGAACGGAACATTGGAAGGAGCGGGGATTCGAAGCACGAATTCC
TGGTTTGAGACGCTGACGCAAACGCAGTAAACAAGCATAAGGAATAGTCT
TTTGTTTTTTTTATGGCCTGCTGTTCTATTGTTGTTTTAATTGAATCAAA
GTGATCCGTTGGTACCAGGAAAGTTAGTGTTCTGCAAATTTTCTTTGATT
TTTACCTTCGGTTATTTACTTTGAGTCTTTATTTCTGTTGTCAATTCTGG
TACTGAGCTAGTAGACAACGTTTTTTCAGCGTTCATCTAACGTTATATGG
CCGTTGTGAACATTATCTGAACGTTAAAACAACGTTGATTCGCCAGCTTG
ATATGCAACGTTGTTTGAATGTTTTATGGACTTTCTTTTATGCACGGTTT
GTGTCAGATGGGAAAACGTTTTAAGTTAAAGATAGGTAACGCCTTTTCTG
TTCATTCATTTATGTGGACAGGTTGCTTTTCCAGCATTGCACCAACACTT
ACTATAAAATGCTTAGCTAAGAGAATTTTCAAAGCTTGATGCGGAAACAT
TTAAGCTAATGGAGATGGAATGGTAATTATAGAGATTTAATTTGTTGAAT
CCATTCGCCATAGTTTATAAAAAATCAAAATTTATTTCACTACATAAAAA
TAGAAGCTTTTCGGCTTACGCCATCGTCAGTATACAAGATTTAATTTATT
AAACGCTTTATCTCTTTTTTCCGCTGAATTTTGAAAAAGGAAAATCTTTT
CAATTATATCATATAATTTCATTTAATTTCAACCATTTGAGGTCAAAATC
GTCTTGGTTGACGGTCAGGGTGATGATGGCAAGAACTTTTATTCTGTTTT
GTTTTTTATATTGTTTGATGGAAATCGTGGAATCGAATGGGGAGCTGACT
CCAGGAAAGTTAGTCCAGTTAATCTTTTTCAGCCATATTTTGAACATATT
ACTTGATGAAAATACTCCTTCGGAAAAGATAATTAACCTAATAGTCTAGC
AAGCTAGACGACTAATTCAGAAATAGTAGAAATAAAGCAAAAAGTAATTA
TCATATAACGCCTATACTACTGTATTACATGCATTATAAACGACTCCAGT
CTATTAACCTAATAAACTGTGATTTATGTTATAGTTCAAACGTGTGCACT
CAATCGCACTTTGAGTCCTACTTGACAACGATCACTCTGTCAAGAACAGT
TTATCAGCAATACCAAATCTCTTGTGGATGGTGGGGCTCGTCGACCTGTT
ACAGAACAAGGTACTGATAAACTCATTTACTTTGTCTCTCACTACTGTCA
GCAGAATTTAAAATACAAGTTCTCAAATCGCACAGGAAAAGATATTTTAC
AAAAGTTTTCTGCTTTTTAAATTTTAAACTTTAGCCTGCTTTAGCTTCTC
TACTTTTTTTTAAAATAACAAATCAATGAAATGTAAAGCGAAAATATTAG
TTTTCATATCGGGAGGGGGGTGTTGATTGTTGGAGCACGACAGTACGTTC
AACCCAAAATTAGGCCTTTGAAAAGGGACCGTTCAAATTTTAGTAAATTT
TGTCGAAAAATCGACCCTTTGGTGCATTTTATGCAAAATGTGGTTAGATT
TTCCAAATTTTACACCCTTAGAGTGCAATTTCTCTCGTCTTTGCTCATTT
CGACCCTTACAGTGCACTTTGGGAAGCTTGAAAAAAGGACCATTAAGTGC
CGCACGCACAGTAGGTTGTTCACCTTGAGTGCCCCCCCCCCCCGGTTTTT
ATCCCCTTATAAAGGTAAATCAGCGAAAAAGTGAGCCTTACCTCTGTAAG
GCTCACCTCTGTAACAATCTTCGTTCTAACCTCAGAGAGAGAGTTTTTTG
ACTTTTCATTGTTTTCGTATCCTTAAAAGTAACAGCAAAATATCCGACCC
TTAGATAGACTATTTTGACTAATTGTTGTTTTTTGTAATCGTGTTAGAGA
CATTGGAAAAGTCAAAAACCGACCCTTACCGTCCGCACATACCTAGCATT
CATTTTTTCCTTCCCGTTCCACTTGACTTGACTTGACTTCACTTTTTCAA
TGCCTTTTCAGAACTCAACGTATCTCTTATTATCAACAAGTAACGAGGTA
CAGAGTTGTATACCAGGATATTTGTTGCCCTGGTTGGGCCCAGCAAGGTG
ATAGCTGTCCAATTCGTAAGTAACCAGCATCTTGATATATCTTGATCAGA
TGAGATTAAAGTCATTTATACTGAAACTTTTTTTAGTATGTAATACTTGG
CTCAGTGTAATTTAGAAGACTCCATTTTTGGTTCTGCTTGATGTGGTAGC
TAATTCATACCACTAGATCCAGTCCCTTTTTGCGTAAAATGAATAGAAAA
CTACTAGACGGTTCCCGTCGTCGCAAACGCCGGTTAACGGTTTTGCTTGC
ACATCAAAAGCCTTTAAAATACTATAATGTGGGTTAATGCCTGACATCGT
TTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTTAATAGGGGTTCAGTTCTTACA
TCTACGCACACTTCTCTTAGCAATTTGGACGTAATGTCTCTAATTTCATT
GTGTCTCAAAGACACGAATCCTCCCTTCTTGTCCGATCTTTTAATCCGAG
TTTTCTACGCTTGTCAAACTTAGCGCGAGACTTTTTGTATCAAAGGTGGA
TAGGTTTTCCAGCCGCGGCGTTCAAATTTTAGAAACCTTAACATATGTTA
CTGGGCTAGCGTTACAGACATTTTTCATAAACTCATTTAGTATAGAAGAT
ATCTAAGGGGTTTTCAAAGTTTGGGGAGATATTTTTGTGTTTTAATTATC
GTTTCATATAATTTGAACGGATTTTAGAATATTTTATTGTTTTGTTGTGT
TCATATAAATTTTGATAAACCGAAAGTGAAAAGATTCAAGATGGTGATAT
TTTATCTACTATATATACTTCACTTGACTCAGCGTCATCAAAAAACAACT
TTTTATCAAATCTTTTTCCGTAATACTTTTTCGGCAGGATTCTAAATTTC
ATCTTATCTCCGCAAGTAAAACTTATTGCTAGCCGGGGAGGCGAGATTCC
CTGGAATTAATACGCCGTAATTTCAACTTTGTTGTTTTACCCTGATTTTT
TTCAGCGGTGTGCAACCCTGTTTGTGTGAATGGAGAATGTGCAGCACCTT
CCACTTGTTCTTGTCAACCTGGCTTTGATGGAAGTCAGTGTGAAAGTGGT
AAATTTCTTCATGTCATCTAAATTCACTCATTTCTGTTAAAACAAAACTG
TTGCTATTATGGAAGCAATTGTCGCAACAAAGGGCCGTAGAAATAGTTTA
AACTTGTTTTTATCAGACATCTATTAAGCTTCTTGGAGAGTGCTCGATTC
GATCTTCATTTTCTTATTTTTCCCCTTCCTTCCAGATATTGACGAGTGTG
CGTTAGGATCCGACGGATGCCAACAAAATTGTGTAAACACTGAAGGCTCG
TTCAATTGTACTTGTAATCCTGGATACTTTTTGTCTTCTGATAACACAAC
ATGCGAAGGTAAAGGAAGAAGACGTGTCTCTCTTGTTTTAATTTTACTTG
TCAACAATACAACTTTTCGACCGTAGCCGGCAATTGCCGCGCGGGCATTT
TTTGCTCGCTTTATCCCACTAAAACCGTCTCAGTCTTTTTTCCGCACCTT
TAGACAATAGAAAAAGGTGTAAAAAAAGGATTGGATCGAGTTTAGGTGGA
TAATTAAACATTAAATCGGCACGCGCCTGACCGCGCGACTACGGTCGAAA
AGGTGTATTACTAATCGTAAAAACCAAACTAAATCGCATGCACTAATCTA
TTCACTGCATAACCAAATAAATAATGAGAGGATTTACAAATCTCGGACTT
TAATGATCAAAATATATATTGAAGGCTCATCTTCTAGCCCTTAATCAACA
TGTCTGTTTTAGAAACTAAATTTTTAAAGCTTTCCCCGGAAGGTAATAAG
TTTAGTCTGGATTTGCATTTCAGAGATTATATTTATCAATTTCAATCGAA
TGCTTACCGTTTAGGTCGATGCTCGATTCGATCTTCATTTCTTATTTTTC
CCCTTCCTTCAGATATTGACGAGTGTGCGTTAGGATCCGACGGATGCCAA
CAAAATTGTGTAAACACCGAAGGGTCGTTCAATTGTACTTGTAATCCTGG
ATACTTTTTGTCTTCTGATAACAAAACTTGTGAAGGTAAAGGAAGAAGAC
GTGTCTCCCTTGTTTTTATTTTACTTGTCAAGAATACTACTTTTCGACCG
TAGCCGCCAATTGCCGCGCGGGCATTTTTCGTCCGATTTATCCCACCAAA
ACAGTCTCAGTCTTTTTTCCGCACCTTGAGACAATAGAAAAAGGTGTAAA
AAAAGGATTGGATCGAGTTTAGGTGGATAATTAAACATTAAATTGGCACG
CGCCTGACCGCGTGACTACTGTCGAAAAGGTAGGTGTATTACTAATCGTA
AAAACCAAACTAAATCGCATGCACTAATCTATTCACTGCATAACCAAATT
AATAATGAGAGGATTTACAAATCTCGGACTTTAATGATCAAAATATATAT
TGAAGGCTCATCTTCTAGCCCTTAATCAACATGTCTGTTTTAGCATGGAG
GTATAAAGAAACAGGAGAAGTATGCTATTGTAACCAAGCTCGCCCTACGA
TTAAAAAAGTTACGATGTATGCATGCTCATAATCTCATATNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTAGAATTTCTTTTGA
TACATTTTATAAAAGAAATCAAAAGACTTTAACGACCAATTACCGACACA
TTCAACTCCTGTTTTTCTTTATACCTCTATGGTTTTAGAAACAAAATTTT
TAAAGCTTTCCCCGGAAGGCAATAAGTTTTGTCTGGATTTGCATTTCAGA
GATTATATTTATCAATTTCAATCGAATGCAATTTACACCTGTTCATCGTT
TACCGTTTAGGTCGATGCTCGATTCGATCTTCATTTTCTTATTTTTCCCC
TTCCTTCAGATATTGACGAGTGTGCGTTAGGATCCGACGGATGCCAACAA
AATTGTGTAAACACTGAAGGCTCGTTCAATTGTACTTGTAATCCTGGATA
CCGATTTTCTTCTGATAACACAGCTTGTGAAGGTCTGTAATTATGATTCA
AATTTCGCCCGTGTTTGAAAAGTGCTTATTTTTTGCTTAATGTCCCCAGC
GAACTTTTCGACGCTCTGTTTAAGAAACCAGTGTTGCTTCTTTTCTGCGA
TAAAACCGCTGACGGCTGATTTGTCCCATATAGAGCCCCTTGTCTTTAAT
TTAATTATTGATTCTCTTTTTAGTTGATATATTGGCTATGATTGCACCAT
GGTCGAATTGGACAGATTGGGATAAGCCCTGCGGAGGAGGTTTTCAGTTC
AGAACATGAACTTGTGACCCTCCACCGCCGTTTCAAGCATTGTGTGCAGA
ACACGGGGGTGATGAAGAAAAACGTCTTTGTAACACAGATATCCTATGTC
CAGGTGCGTCTCTCGTATTTTTTGATCTCCTACTCAGAGTCACTTGCACC
ACTTAGTAATTTTACTGGTGGACGTTATACATACCATTGGTAAACGCTAT
CATAACAAAGTAAACAACTAAAGGCCTGGTGGGCTAGACACGAGTCTGGT
AATATTAAAGTTATAATAAAACTAACTTTTCTGATCGATAGTTCTGATGA
GGAACAAGGTTACTTCATTGTTTTAAGCTGTTAAGATCGACTAGTCACCG
ATCACCTGTCACTGATCTGAATTTTTCTACGATGAGATATTTTGCTTTCG
CATCGTATCGGTTAGTATAGTTTAAGTTAATTTATACTTTTGCACGGTTT
TCAAGAGTTCTACTCATTGAGATGGGAACGCCAACCACTATATCAGATCA
TTAGAAACTGCAATCAAAGTCATAATATTTGAGAAAAAAGGGAAATTCCC
ACGAAATCTTACAACCACAAACGATTTAGAAGCGCTCTAAAGTAGGTTGG
ACGGGTAGAGTTTTAACTCTGAGTTTTAACGCTAGACTTAAGACTTAGGG
CCTTAGGATCTGAGGAACTAAAAATTCAAGAATGGTCCAATAGGGCTCAG
AATATAGCCTGGAAGTCTATAAACCCCTCCCGAATTGAAATATTCGAATA
AATTTATCAATTTGCCCAAAAGTGACTTTTTCGCCCGACTTTAAATTGCT
GAAAACAAAGAATTAACCAAAATTCCCAATATATTTTGACCGAGATTGTG
GCTCTAGCAAGAAATGTTCGCTTCACTTGAGATTCTAGACATTTCGAGGT
GGGGGGTGGGGGGTTGGTGCATGAAAAACAGTATCGACATTTCAACAAGT
TTACTTAGGGATGATTTTTATGTGAAAAGAAATCATCTCATTATTTGAAT
TTTGTAGAAATGTGTTCGAAAATGAAATCAATTGATTGTTCGAGTGTTGT
TGACATTTATGATATGGCCATCCTTAAAACGAACCACTCATATATTGGAA
TGAACGAGACATCAGTCAATTCGTCTTTGGTTGCCATAGCAACATGGAAT
ACTCAAAAAATTCAAAGTCTTTGTAAAGGTATTGTTTTTTCTACATCAAT
ATGATGGACGCTATAGAATAACTTATCTGTTATTATACATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042630XLOC_042630Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068312-exon-scaffold_482-1575043694:408982..409398TCONS_00068312-exon-scaffold_482-1575043694:408982..409398Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1575043694:401989..402114TCONS_00068312-exon-scaffold_482-1575043694:401989..402114Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1575043694:401084..401187TCONS_00068312-exon-scaffold_482-1575043694:401084..401187Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1575043694:398601..398693TCONS_00068312-exon-scaffold_482-1575043694:398601..398693Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1575043694:397614..397736TCONS_00068312-exon-scaffold_482-1575043694:397614..397736Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1575043694:395467..395589TCONS_00068312-exon-scaffold_482-1575043694:395467..395589Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1575043694:395096..395275TCONS_00068312-exon-scaffold_482-1575043694:395096..395275Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1575043694:393956..394191TCONS_00068312-exon-scaffold_482-1575043694:393956..394191Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1510915933:408982..409398TCONS_00068312-exon-scaffold_482-1510915933:408982..409398Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1510915933:401989..402114TCONS_00068312-exon-scaffold_482-1510915933:401989..402114Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1510915933:401084..401187TCONS_00068312-exon-scaffold_482-1510915933:401084..401187Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1510915933:398601..398693TCONS_00068312-exon-scaffold_482-1510915933:398601..398693Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1510915933:397614..397736TCONS_00068312-exon-scaffold_482-1510915933:397614..397736Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1510915933:395467..395589TCONS_00068312-exon-scaffold_482-1510915933:395467..395589Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1510915933:395096..395275TCONS_00068312-exon-scaffold_482-1510915933:395096..395275Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1510915933:393956..394191TCONS_00068312-exon-scaffold_482-1510915933:393956..394191Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1491911889:408982..409398TCONS_00068312-exon-scaffold_482-1491911889:408982..409398Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1491911889:401989..402114TCONS_00068312-exon-scaffold_482-1491911889:401989..402114Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1491911889:401084..401187TCONS_00068312-exon-scaffold_482-1491911889:401084..401187Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1491911889:398601..398693TCONS_00068312-exon-scaffold_482-1491911889:398601..398693Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1491911889:397614..397736TCONS_00068312-exon-scaffold_482-1491911889:397614..397736Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1491911889:395467..395589TCONS_00068312-exon-scaffold_482-1491911889:395467..395589Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1491911889:395096..395275TCONS_00068312-exon-scaffold_482-1491911889:395096..395275Clytia hemisphaericaexon
TCONS_00068312-exon-scaffold_482-1491911889:393956..394191TCONS_00068312-exon-scaffold_482-1491911889:393956..394191Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_482supercontigscaffold_482:393956..409398 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.641164	0.355871	0	0.437241	0	0.202536	0.370831	0.694153	0.920587	0	0.292225	0.960487	0.157784	0.662775	0.281027	0.437931	0.866114	0.235159	0.61323	1.28153	0.418311	1.09721	1.08442	0.920112	0.657246	0.35697	0.274067	0	0.866235	0.499003
Blast
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BLAST of TCONS_00068312 vs. Swiss-Prot (Human)
Match: MEGF6 (Multiple epidermal growth factor-like domains protein 6 OS=Homo sapiens GN=MEGF6 PE=1 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 1.737e-22
Identity = 69/179 (38.55%), Postives = 91/179 (50.84%), Query Frame = 2 
Query:  467 TLSRTVYQQYQISCGWWGSSTCYRTRTQRISXXXXXXXXXXXXXDICCPGWAQQGD--SCPIPVCNP-VCVNGECAAPST---CSCQPGFDGSQCESDIDECALGSDGCQQNCVNTEGSFNCTCNPGYFLSSDNKTCEDIDECALGSDGCQQNCVN-TEGSFNCTCNPGYRFSSDNTAC 982
             LS TV   ++  CGW      +  RT     Y+QV          CC GW QQ D   C    C+  +C +G    P +   C C PGF G +C+ D+DEC   + GCQ  CVNT GS+ C C PG+ L +D++TC  I+ CALG+ GCQ +CV  T     C C PG++   D   C
Sbjct:   65 ALSHTV-PVWKAGCGWQAWCVGHERRTVYYMGYRQVYTTEARTVLRCCRGWMQQPDEEGCLSAECSASLCFHGGRCVPGSAQPCHCPPGFQGPRCQYDVDECRTHNGGCQHRCVNTPGSYLCECKPGFRLHTDSRTCLAINSCALGNGGCQHHCVQLTITRHRCQCRPGFQLQEDGRHC 242
The following BLAST results are available for this feature:
BLAST of TCONS_00068312 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEGF61.737e-2238.55Multiple epidermal growth factor-like domains prot... [more]
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