TCONS_00068372 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068372
Unique NameTCONS_00068372
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2000

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068372 ID=TCONS_00068372|Name=TCONS_00068372|organism=Clytia hemisphaerica|type=transcript|length=2000bp
cttcttttgaattttgttgtCATTAAAAGTAAGCTTTAATATTTGTGTTG
AAAGACACAGTATAGATTATATCTTGGCGAAAAGAGAAACTGGGTTGTTT
TTTTGCAtaatcgaagaaaaaaaacgatttttgttgtttatttagCAATA
AAAAGAAGccTTATAAGGAGATGGTGACAACGGACCAATCAAGATCGAAT
TCACCGGCCCATCATCATAGATCGATTGGCGAGAGGCGTGGTGAAAAAAG
AATGGATGAGCACGCCATCATTACGCGCTTGTTTGCCGATGGTCGTTGTC
TATGGCCTTCTTGTAATACCTCGTGTATGGATAAACACGATTTTGTAAGA
CACTTAGATACAACCCATGCAATGGACGAAAAAGCAGCAGCTCAGGCTAG
AGTTCAGAAATATGCCGTCGAAGAGTTGGAGGAAAGGTTATCATATGAAC
GTTCAAGGCTGTCAGCCATGTTGGCACATTTGGAATACGCTTCTGATAAA
GGGTACGTTCTGCACAAGTCGGCTCATTCGGCTTCTCCACCACCTCGATC
AGGATCCGGACACCATCACCCAGTCAGTAACGGAGGTGTGGTCTACCTAC
CCTACCCGCCACCGCCACACCATATCCACGCCATCCCCACCCACGTACCC
GATGATCGTGTCAGTTCACCTCATCACCGTGAAAGAGAAAGAGAGCGTGA
GAGAGAACCACGATCTCCACCTCAATCGAACTCGCCACGAAAACATTCTC
ACCATAAACCAGCCCCTGGCGGTCATTACCACTTACCGGCTCCACACTAT
TACCCAGTCCATCCAGCTTATCCAATCGGACGGCCCGTAGCTTTAAAACG
CGAATCGCCTGGAGACGAAAAAAGCCCTAAAGATGAGAGATACCCACCGC
CCGGATTGATTGCCGCCCACCCAGAGGAATTAATACATCGACCAGCTATT
GAGGCATCAGCACACCCACCAGGTCCACCATTAACGCCCAAACAAGAAGG
CGGATACCACCCTGTAAGGCGTCGTGGTGAGGCGGCAGCTATGGTTGACA
TTGGGCATGGTAAGGAAGACATAGGTTATCAACTTCGCACAAAGGGTAAT
CTATACCAAGACCCAAACATCAGGCCACCTTACACGTATGCCTCACTTAT
TCGACAAGGTGTTTTAGACTCACCTAATGGAGAATTGACTTTAAACGAAA
TTTACAACTGGTTTATCAAAAACTTCGCTTTCTTCAGAAAGAACACTAGC
ACTTGGAAGAATGCCGTTCGACACAACTTATCGCTACACAAATGTTTTGT
TCGAAAAGAAAATCACAAAGGAGCTGTATGGACGGTCGATGATGTTGAAT
TCTTCAGGAGAAGAATGACAAAACCAGGACTACCACGAAGAGAATATTAC
GCGCCCGAAGAACGCCCCAATTCTCCACCCGAAAGTGGTGGTGAATATGT
GACGGATCTTCCATCTATGGCCATGTCAAGAAAGGAAGATTCAGAAGAAG
ATAATTCACCGCCACCTCCGCCCACGCAACAACATCACGCTCACGAAGAA
AACGGTGAACAAGAAAATTCGATGGCAATCAAAGAAGAACGAGAAGAATA
CCTCCAGCATGCaGATACAGTGATGGTGACATCTTGAGAGTTTCAACAGT
GTTGCAGTAACAATTATGGAGACTGACAGTTGGAGTTGGTAGTACTTGAC
AATGAATTCAACTTCGAGACCCCTTTTTTGGAAGTTCGTTACTTAAATTT
AGTACTAGCCCATGTTGTATGTTATTTTctaataatatttattttatggA
CTTTAGAGGATATAAATTTATCTCCTCGAATTTCTCGACAATCTCTCGAA
CttgaaaactattttctttttagcatAGAACTTTTTTAAGTGGGGCAAAA
ATTTCTGTAGAACCTGTAGAAATCTCAATTTTCAAGAGATACCTTTTTTT
GTTACAGTAATCCTccttttaaaaacctttgtttagtatattttgtttta
Run BLAST on NCBI

transcript from alignment at scaffold_483:77882..89258-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068372 ID=TCONS_00068372|Name=TCONS_00068372|organism=Clytia hemisphaerica|type=transcript|length=11377bp|location=Sequence derived from alignment at scaffold_483:77882..89258- (Clytia hemisphaerica)
CTTCTTTTGAATTTTGTTGTCATTAAAAGTAAGCTTTAATATTTGTGTTG
AAAGACACAGTATAGATTATATCTTGGCGAAAAGAGAAACTGGGTTGTTT
TTTTGCATAATCGAAGAAAAAAAACGATTTTTGTTGTTTATTTAGCAATA
AAAAGAAGGTATGTAAAACACCAGTAACTATTTTCTTTCCTATACGTTTT
TATTTATGAAGCACCTATTGCAGGTTGCTCTGTTGTTGAAAACTTCCTAA
AGGCTAACCTTTGTGATTTCAAGCAGCACGATAGTAGAAAAACAAAAGGA
AAACCTGCAAGAAGTTTACGCCTTCAGATGACCCTTCAATTATTGTTACA
TTAAAATAAACATCTGGCAAACAGTATGTGTTGGTGAAACACAAAAAAAC
ATTTTTTTTATGATTTGTAAAAAAAAAACTCTGTTTCTCAAAGTAAATAT
GTGTGTTGAAGTCAGTTGGGCGCTTTATGTTCGCTTTTCCTCTTTCAATC
TCTTTCATTCATTGTGTTAGGATTTTTCAAAGAAACAGTAGTAGTAACCC
TTGTTGCAGTATCCGTGTGGCAGGGTTGGTGTGAGTTTTGTTATCAGGTT
TTCGTGGAAGCAACGTTTATGATGACCAAACTATAAGGATAGGTAATTTG
TCTCAAGATTTTTAAATTTTTTATTTCTATACCTTCAACTAATCGGCGGC
GTTGACAGAGGTTCGCCACTAAAATGCGACAAATCCTCCATGAGACTCCT
AGACTGGAGTCGTTTATAATTTGTGTAATACAGTAGTATAAGCATTATAT
GATAATACGATTATTGTTACGGGATTTAGTTTGTATAAAACTAAAATTTG
CTCCCTCCATTACTTTTTTCTACTATGTCTAAATTAGTCGTCTAGCTTAC
TCCCGTTAAATTCAATCCTGGTTTACATACCGCCTTTCCTTATCATTAGG
AGTTTTTGCCTAATTTACTTGTTCTATCTTTCGAGTGACCTTACTAATGT
AACATTTTTAAAACCGATTCTAAATTCTACTTTTAATTGGCTTTTCTTAG
GCGTATTCTTACATTTTGAGGAAGGCTTCTTTTTTTCCGTACTTTATAGG
CCTTTGACAACAAGGCGTTCTAATACTTCGATTCTTAAGCTCAGAACAGC
AAACTAAGGTTGTCTCATATTGAAAGTGTTTTGTTCAGAGTAAACATCCT
ATCGGAATTTAAATTCCCTGTGTTTAGCTCCTTGCATAAAATATTAGATT
TAACTTTTTTTTTACTGTTTTGATCTAAAAGCTGCAAAGCCGTTTGGAGA
TTTAAAGTCACTTGGTACTGTTGAATATAGACCTTTAGGAATGACATATG
TCGATAGTATTTTTACCCGAATTAAAGAGCTTGATTTCTAAAAAAATACC
TAGGCCTAGTTATTGAAAAAATGATCACTGCCTAAATTTTAGCGTTCGTC
ATTTATTGGATATTCTTATAAAAAGAAGTTGACGGCCTAAGGGAAGCAAT
AGCAGTGAAACTATGTATTATGACGCGGTCTCAATTTCAAAACAAACAAA
TAGAGATGTTTATGAAAGCTTTTCCAAACGAGACCTTTTCACCTTCCAAG
ACATGTCAATGAAATCTTACTGTTTTCAAATTGAAACCAGCACCTTATGT
TGATTCGCTACATGGTTTCTATTAACTAGAAAGAGAAATTGTAAATGCAG
CGCTGAGGGAAATAATCTGTGACCTTGCCTCGAGTTTTTGGTAACACGTA
TGGCTCGTGCTTTTCAACCATCTACCCTGGCACTTTTCTAGCACCCTTGG
GATATCCTTATTGCCCTCTTGTTAGTTAGCCTTTTTAAAAGAACCGCTAA
AAATTTTTCAAATTTTGACATTTTAAGAGCTTTTAAACCTCAAACTTTTC
CAGGCTCAGACCTCAATGTTCTTCTTAAATTGTTCTTATCTTTTTGTCCG
TTCTCATAAAAAAGGGTATCTGGTAGATCATTCAGAATTTTTAATTCTAA
ATGTCAGCGTGAGAACCGGGTCATTCATTCGTATGAAACGTGGTTTCTAC
ANTTTTAATTCAAAATGTCAGCGTGAGAACCAGGTCATTCATTCGTATGA
AGCGTGGTTTCTACGCAGGAACTGGATACGGCCTTTAGTGGTGAGAGTTC
GTGTTTTTAGAAATACAATTTTCACTGTTTATGGGTAAATAAATAAAAAT
AGAGTAAAAAAAGATGTCATTAACTGAAAAAAGTTTTTCTTATATCACCT
TACACTGAGCTCTTTCTTTCATTCATAAGAACAAATTGTCTGTTCTGATT
ATTCCAGATACTTATTTTGAACTCAGCTTATAAGTTCTTTTGTATTGAAA
ATGATGTTCCAAAGACTGGCGCAACCCGATTCTAGAAATTGTTCCGAAGA
ATAATCGAAAGTTAATAAGATAAGTGCCTTTGAATGAAAATCGGTTCTTC
AGTTTTTTTTGAGAATTCTTATAAAATAATTTAAGAAATTTTGAAAAAGA
TTTTTTTTGTACAACATTGTTAGTGTTTATAAGGTCACATTGTAAAATCA
ACATTATCATGCTTTAAAGAAAATAAAAATGGTGACGATGATGGGCAATG
ATATAAAAATGTTTATCATAAATTATAAATTTTTCTCTCGAATGCAACGT
AATGTTTCTGATCTTGGATTCGTTCATTTAAGATTCTATTAATCTAGCTA
ACTTTTCTTTCAATTTTCGTCATTTTTGGCCTGGTCACGAAGTTTTAATC
TTCTTTTGTTTCGACATAGCTCTGATGGTTCTTTTTTTCCAACCTTTTAA
TAGTTAAATATCTTTCTTTTAAATGCCACAGGCGTTTTTCTGTCGTGCTT
GGAAAATATTTCCAAAAGTAATTGGTTGGGTGAGTATGATAAAAAATTGG
CGTGTAGACGCTTCTTATTAAGTACCTGAATGTTACAGTCAATGTTTCAA
GGTAGATTATGGATGATGAATTCCTGCCTCATCTTTTCATCGAGGACCAA
CCCTTCCATTAGTTCGAATTATAGGAAAGATTCGAGAGAAGTTCTGACAA
GAGAAGACTGCCTGTATAGTACAGTTTACTCTCGCTAATTTGAATTCGAA
CTGGGAATCTTATTTATTCGAATTATAGAAATTATTTTAAGAGGGTTTCT
CCTTGACGGATACTGTAAAAAGCTCGATTTATAGAAAGATCTACTAAATA
TAGAAGTTCGAACTAGAGAAGGCTGACCGAAAAAATGGGTAAAAGATATC
TTTCAAAAAATGATGTTGTTGATGATAGGTTATAATAATGATGACAAAGT
TTATGAAATTTTATTTGTTTGTTTTCTCGTCAATAATAAAAACGAACTTG
TGTCAAAATAAGAAAATTACAGTACGGTTTTGTTGTTGTGATGTAGTTCA
AAAAAACTCATAAGCCTCTTAGTGTGTGTGTTTACATGTCTATTTGATGA
AGGGCTTAAAGTCAATCCTTTTTTTGTGTTTCTATTGGTCATAAAAAACC
ACAATTGTGGTTTTGGATTATGGAGATTTATTGATTTGTTGTTTTTGAAT
CGTACCAGGAATAATGATGGTTTTGTAAGACCCTCCTCTTGAAATAATGA
CTTGTTTGCGTTTTGATTTTTAACCATGTTTGCAAGTGATGTAAGGTTTT
AAGTGTGTGTTGCTGGATCTAGACAGCTAAATCTTCTTGCAACCACTTTT
TTTAACTTATGTACTATGTGTGCCAGTTGCCAGTTGTTTTCATATAAAGT
CACTAAATTTGTTTCGACGTTTGAAAATTTAGTAGCCCCATCTGCTTGTC
TTCATATCAAGACACTCGCCGTTTGAAAATAGCGAGTTTATATACTTGCG
TATTCGAGGACGGTAAAGTGACTGAAGCGATTTGGAAAAACCCGCACTTC
TGACTCGCAAAATCAAGGACGGTAAAAGTGCTGATTTACCGTCGTCCTCG
GCTGGTCAGGATCTAGTCAAATCAGAACCTTATCGTCTCCGTCGTAGAAA
AACACACATAAATAAACTCGATACATTCCTCTTACTATTACTTGCTTCAC
TTATACGAAACAGGAACTAAAATGCTCTTCCTGCGCTTTTTTCTTTGGAA
TTCGTAGAAAATGTTTCAAGTTCTTGACGCCTCTTCTGAAAGAAATAAAT
ATACTTGCACTGTTGACTATAAAAAGCCACAATTAAGATTAATTTGACTG
GATTATGATTGGAATTTAACTTTGATTTTGATAATTCAACCATTCTTTTA
AATTCATCCTAATTCCTCTTCCAACAGAATAGTAATGAAAATTGATAGAA
ACACAGATTTCTTAGAATTATCAACGAAAAACGTTACGGCAGACGAGGAC
CCAGAGAGCGGCGCCATTTTGAAAAAGGCGTCATTTATGGACCTAGAAAA
TTCATCACCCATTAATACAAACAACGGTGAACCACCACACAAGAAAGGGC
GGAACAACATCCTAAATAACAACGAGGTTTTAACGCCCGTTGAAACCACC
CAACACGCCCCAAATTACCGTGTTGACATGAAATTGAAAAGTCCGAGCCC
GACTGAGGATGATTATATAAAATCAGATAAAGTGCACACGCATCACGGTC
GTGTTACGCACTATTATCGCGATGAACCGAAACATGACATGCTTCTCGCT
GTCAAGGTAACTGCAACGGCAAAATTCATTCAAAATACACCTATTGACAT
TTTTGCTTAAAAGCTTCGTGAATTTAGGGTTGGGTTCGAGTTTGCCATGC
TCGATTGTCGTCAGATGCTTGAATATCTGCATTAACATTCTCGCAGATAC
TAATATTTGACTGTCATCTAAACCTCGTAAACCCGATTAACGATCCCTTG
TTCTCGAAGTACTGCAGGTTTATTTGAAAGAAAATTCCGGCGAACGATCT
TCTAAAAGTCCCTAACTTATTCTAGACGTTTATCTTTTTTTCTCGTACGG
TAACACATAGTTTGGTTTTTACTCGCTAGTAGCAAACCCTGTGCGACAAG
TTACACTTTTCTGTAACCCGAAATTGTCTGCTTCATATTGATTTTAATAA
TTTATTTTTTTTATTCAGCCTTATAAGGAGATGGTGACAACGGACCAATC
AAGATCGAATTCACCGGCCCATCATCATAGATCGATGTATGTATTATTAA
GCATCTGACTTGGAAAGTTACCCTCGGGCTTTGTTTTTTAAGATTTTGCC
TTCCTTTACCCTTTAGCTTTTTTGACTGTGCTAAATTTCCACCAAAACTT
TCATTTTTCTCATCTCACGTTCAATTACTTAATCTTACCATTGCATAACA
ACCCCGGGGGGGGGTGCTTAGGCAAATGGAGGGCACGGTATGTGCCGCCC
TTAAGGGTACCTTTTTTGGACTTCCAAAGTCCCGCTAAGGGTCGGAAAAA
TCAGGAAATCTAATTTCAGTCCCACTAAGGGTCGGAAAATTGGAGAATTT
CAACTTTTTACCCCCTGAAAGATCAAAATTTGGTCAAATTTGGTCAAATT
AATCCCGCTAAGGGTCGTGAAATTCCCAAAATTTTCCTTTGTTTTCTCCT
TTTTAGTCCCGGTAAGGGTCTAAAGTTCGAAAGTCAGCTCGCAACCCTAG
TACCCCCCGGGATAACAACTCTCTTTGTACTGGTTAGAACAAGCATATCA
TGTCAATGTCGATATATTTTTTATGATGGTGTGTAGGTGTAACTTCTTTA
CCCCTGCGTGAGCCTTTTGATGTTTACTGATAGCGACATATAATTTTCTC
TGGTGTCCATGAGTAACATGGAGTCTAGGATAAAGGGACAAGCTGGAGTT
TTTACAAGCTCTTTCTTGATTTGGTTGGTCGTTAGCCTGTAATAAAACAA
TTTTGTTACTTTTTCTAAAGAACGAGTCATCTCTATTATCTTAAATGACC
AATTAGTGAAGTACAAAAACTATATCTTATAAAAACTCCAGAACATCTCA
GGATAAACGGGGACGAGGTTGTGTTTAGGTAGCAGGTAGACCCTTTCTAC
AAAAAAAAACAGGCAAATAACTGATTCTTCTATTGGTTTATTTTAGTGGC
GAGAGGCGTGGTGAAAAAAGAATGGATGAGCACGCCAGTAAGTTACATTC
CATACAAGTACTTGGTTCTTGCTATTGCACGCCAATTATCTATACAAAAC
CTAGAGATAACAAAAGTAAAAAAGTGAATACTTTGTATAATTTACTAACT
CCCACTCTCAGAGTAAGACCTATAGATGCTTATTGTCCATGTAAAGTGTA
TTTTTTCTATTTTATACTACCGTTGACGCTCTCTTATTCGACGTTGTACT
ATTCGATAGGCTCCCTTATTCGATGAAATTTAAATTCTCCGTCAATAAGA
AACTCTCATAAACGACGTTCTACTATTCGATAAGCTCCCTTATTCGATGA
AAATCCGATTCCCCTTGAAGATCGAATTAGAGAGCGTCAACTGTATATCC
TAACTTATTTTCACTTTTCTAGTCATTACGCGCTTGTTTGCCGATGGTCG
TTGTCTATGGCCTTCTTGTAATACCTCGTGTATGGATAAACACGATTTTG
TAAGGTAAGCAAATCTAAAGAACGATAACAATTATTAATGAAAGTTTTTT
GTTTCCTTTTCTATGAATTAGGAATTGTATCATCTTTTATCATATTAACA
CTATATTTTTCTGGATACTCATCTAACACAATCAAATTCCATAGGGTAAT
CACTTTTTTTGTCATGTTTTCGCCTTTAATTTTGAATGAGATTCTATTTG
GTAACTTAAAAAATGGTTACTAACGATTGAGTTAATCGAAATTCAGTACT
CATCCACACCTGAAAATTGCAGTTGTTATTATCCATTGGAACTTGATTTT
TACCAAATTTTCCCATGTTGACAGTCGTTACATGGAATTAAACGAAATAA
AGAGATTTTTACAACCGATGAACGTTTTCCTTTACGATTTAGACACTTAG
ATACAACCCATGCAATGGACGAAAAAGCAGCAGCTCAGGCTAGAGTTCAG
AAATATGCCGTCGAAGAGTTGGAGGAAAGGGTAAGATGTTTTTAGTTTAT
CATCTTAGTATCTTAGACCATAAAAGGTTTCATGTTTACAACTTTTTGTC
TTATGCTTAACTTGAAACTTCATTCAATTGGAGATGTTTTCTCCAATTGA
GTATGTATTGATTGCTTTTACTTTCCAAAAGAGGACTCAGGGTAATGTAG
AATAGATTTTATAAAGGCTTCTTTCATTCTTCCTTTTTAGTTATCATATG
AACGTTCAAGGCTGTCAGCCATGTTGGCACATTTGGAATACGCTTCTGAT
AAAGGGTACGTTCTGCACAAGTCGGCTCATTCGGCTTCTCCACCACCTCG
ATCAGGATCCGGACACCATCACCCAGTCAGTAACGGAGGTGTGGTCTACC
TACCCTACCCGCCACCGCCACACCATATCCACGCCATCCCCACCCACGTA
CCCGATGATCGTGTCAGTTCACCTCATCACCGTGAAAGAGAAAGAGAGCG
TGAGAGAGAACCACGATCTCCACCTCAATCGAACTCGCCACGAAAACATT
CTCACCATAAACCAGCCCCTGGCGGTCATTACCACTTACCGGCTCCACAC
TATTACCCAGTCCATCCAGCTTATCCAATCGGACGGCCCGTAGCTTTAAA
ACGCGAATCGCCTGGAGACGAAAAAAGCCCTAAAGATGAGAGATACCCAC
CGCCCGGATTGATTGCCGCCCACCCAGAGGAATTAATACATCGACCAGCT
ATTGAGGCATCAGCACACCCACCAGGTCCACCATTAACGCCCAAACAAGA
AGGCGGATACCACCCTGTAAGGCGTCGTGGTGAGGCGGCAGCTATGGTTG
ACATTGGGCATGGTAAGGAAGACATAGGTTATCGTGAGTTGACGTTCTTC
TCTTCTAATTTTTAACTCAGACCCCTTTTTTTAGAAGTTTCGTAAAATGA
GGTTTTTCAAATTTTTTATATAAAACGATTCTCAAGTTTAAATTTTTTTT
ACAAAGTCACAGTGACTCTATTTCGAGTTTTGTATTCTATTTGCAAGTTC
GATTTTAATTAGTCTCGTTATGCCGTAACATTTCAGTATCATTTAGAATT
ATGACCCTCTTCAATTCGTTCAAATACTAAAGATTAACTTTTTCCCCCTT
TTTTCACTATCCAGAACTTCGCACAAAGGGTAATCTATACCAAGACCCAA
ACATCAGGCCACCTTACACGTATGCCTCACTTATTCGACAAGGTGTTTTA
GACTCACCTAATGGAGAATTGACTTTAAACGAAATTTACAACTGGTTTAT
CAAAAACTTCGCTTTCTTCAGAAAGAACACTAGCACTTGGAAGGTTGGTT
TGAGTATTCATTTTTACGGTACAGGGAAGGAGGAACTATCTTTTAAGGTT
CAGAGATAAAATTTGCATGCTAAGAAATGGAGAAAATCTACAGTAGCCTC
TCGCGTATTCGAACTCCTATAATTCGAATCCTTCTACCATTCAAACTAAT
TCTCAGCTCCCACCAAGGGAAACCCTCATAAACACTTTCTCTAGTTAGTG
AATCTCTCTGTAATCTGAACAAAGAATTAATTGGGCTCTTAACTGTAAGA
TTTTTCATGGTATCATATATTTGACCGTATTATAAAAATTCTATTGTATA
GAATGCCGTTCGACACAACTTATCGCTACACAAATGTTTTGTTCGAAAAG
AAAATCACAAAGGAGCTGTATGGACGGTCGATGATGTTGAATTCTTCAGG
AGAAGAATGACAAAACCAGGACTGTAAGTTCAATTTGAAATCAATAACGA
ACCAGGGGGTTCAGGGTTTCTTTTTAAACTTGTCACGTTTGTCCAAAAAT
TGTTTAAGGAAGGGAAGCTTGTTTGTAAGCCGATTCACCACCAAAGACAA
CTTAAAATAATTTTTCAAAATTCATTCTGATTCAGACCACGAAGAGAATA
TTACGCGCCCGAAGAACGCCCCAATTCTCCACCCGAAAGTGGTGGTGAAT
ATGTGACGGATCTTCCATCTATGGCCATGTCAAGAAAGGAAGATTCAGAA
GAAGATAATTCACCGCCACCTCCGCCCACGCAACAACATCACGCTCACGA
AGAAAACGGTGAACAGTAAGTACAACCTGTAATTTGTCACACGCTTTTGC
ATTAGAAGTTTGCGAAACTTGAGCCTTTTGAGTTCACAATTTTTTCGATC
TTACTTTCCAACCAGTTCTACAATTGTTTGCAATGGTTTATGCCTAGTCC
TTTAGTATTCTTGAAACTTGACAGATCAAAATCTTGACAGGGGTCTATGA
AATTAGCTCGTTTTATAGATTTTATTTCAAACATTCCGTCTTCGATAATG
CTATTTATACCCATAATGCATCGTATAGAGAAAATAAGAACTGCAGTGGA
TTGTAGATTTCGTTTCAATAATACATCACAGAATTTACTAGATTAAAGCA
CGTGTTGAAATGATTGTTTCTCGTTTTTGTTTACAGAGAAAATTCGATGG
CAATCAAAGAAGAACGAGAAGAATACCTCCAGCATGCGTAAGTCTACTTT
GACCTTCCTTTTTATATATCAGAAATCCACCATTATGGATTAAAGCAACC
GATTCGAAGAGATGATTGGTTAAGCGAATCGAATGTCTTCCATAATAGTG
GGGGTTAAGGGTTAGGGTTTACTGAAAACCACTACACGTTTTTTTTTTTA
TTAGAACCTAGTTTACAAGAACATATAGGCTGAAATTCGTCGAAAAATTA
AGAACATCTTAAGAACATGCCCAGCCTCCGTTTGGAAAAAAATGACAAGA
AACTACAATTTCTTCCTCTTTTTAAGCAGTTTTTAACCGAATTTAGGGGT
GGATCTTCAAAAGTCGAGTGTCAAATATTGTCTAAATTTTGCTAAATTTA
AGTGCTCTTTATTTTGTATCATATTGTCGATTTACAGTAGTCTGAAAAAT
TAATAACGCATTTAAGAACATTTTAGGCTGAAAATTGCTAAAAAAATAAG
CACATCAGAGCTCGAACCGGTGATGGATTCCGGTCAAAGACAATCCTATT
ATTAAGAATTTTCTGTAGACTGGTTGCTGTAGAAATCTTTTCAATAATAC
TGTGTAATTATAGATTCTGAGCGGGACTACTTCCTGAAAATCAACATTTT
GAGAGCAGTGGCGTTGTGGGAAAATTTTTCTGGAGGGGCCAAAGTCAATT
TTTTTTAAATGGCGCCCCCCCCCCTCCAATTTTTCAAAGTGGTGTCCCCA
CCCATCATTTTCTAAACTTTTACCAAATTCATTTGCCTAGGCATAATGAG
GAAGGAAATATTTAGTGGAGAAAAGTAGATTTATCTTTGATGAATGGAAA
AGGGAAAAACAGGCCCCACCATGGTTGGGGCCGACTAGAAAATATTTTTA
AATCAACTGCCAAGATACCCTAAATCACTAAATAAAAATAGACAAATTTT
ACACTTGCTAGAGTGAAATGAAACTTAAAGAAACAATGTGTTATGCGAGC
GAAGCGAGCGAAAAAATAGATGTTTTATGATTTCAATATTGTTGTCAGCA
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCAATATTGTTGTCAGCAGATTGGTCTTGGGAC
GCAGTTAGCTTTACATTTAATAATGCTATATTGTACACAAAAAAAACTTG
TAAATTAGCTAGATATCAAAAAAGTTACCACTTAACTGTATTGCGAGCGA
AGCGAGCGAAAAAAATTGCAATTATATTTANNGGGGGGGGCCATGGCCCC
CCCGGCCCCCCCTGCCACAACGCCACTGTTTGAGAGGTATTAATCTCGGG
ATATTTCCCAGATTTCAGGATTTTTCCTCTTTGTAACCCTCAGAGGGCGA
CTGAAATTAATACTATTATTCTTTTTTTTTTCTTTACAGAGATACAGTGA
TGGTGACATCTTGAGAGTTTCAACAGTGTTGCAGTAACAATTATGGAGAC
TGACAGTTGGAGTTGGTAGTACTTGACAATGAATTCAACTTCGAGACCCC
TTTTTTGGAAGTTCGTTACTTAAATTTAGTACTAGCCCATGTTGTATGTT
ATTTTCTAATAATATTTATTTTATGGACTTTAGAGGATATAAATTTATCT
CCTCGAATTTCTCGACAATCTCTCGAACTTGAAAACTATTTTCTTTTTAG
CATAGAACTTTTTTAAGTGGGGCAAAAATTTCTGTAGAACCTGTAGAAAT
CTCAATTTTCAAGAGATACCTTTTTTTGTTACAGTAATCCTCCTTTTAAA
AACCTTTGTTTAGTATATTTTGTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042667XLOC_042667Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068372-exon-scaffold_483-1575043694:89101..89258TCONS_00068372-exon-scaffold_483-1575043694:89101..89258Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:84123..84190TCONS_00068372-exon-scaffold_483-1575043694:84123..84190Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:83172..83212TCONS_00068372-exon-scaffold_483-1575043694:83172..83212Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:82705..82786TCONS_00068372-exon-scaffold_483-1575043694:82705..82786Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:82229..82316TCONS_00068372-exon-scaffold_483-1575043694:82229..82316Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:81376..82018TCONS_00068372-exon-scaffold_483-1575043694:81376..82018Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:80916..81094TCONS_00068372-exon-scaffold_483-1575043694:80916..81094Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:80486..80607TCONS_00068372-exon-scaffold_483-1575043694:80486..80607Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:80144..80323TCONS_00068372-exon-scaffold_483-1575043694:80144..80323Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:79722..79772TCONS_00068372-exon-scaffold_483-1575043694:79722..79772Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1575043694:77882..78269TCONS_00068372-exon-scaffold_483-1575043694:77882..78269Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:89101..89258TCONS_00068372-exon-scaffold_483-1510915933:89101..89258Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:84123..84190TCONS_00068372-exon-scaffold_483-1510915933:84123..84190Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:83172..83212TCONS_00068372-exon-scaffold_483-1510915933:83172..83212Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:82705..82786TCONS_00068372-exon-scaffold_483-1510915933:82705..82786Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:82229..82316TCONS_00068372-exon-scaffold_483-1510915933:82229..82316Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:81376..82018TCONS_00068372-exon-scaffold_483-1510915933:81376..82018Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:80916..81094TCONS_00068372-exon-scaffold_483-1510915933:80916..81094Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:80486..80607TCONS_00068372-exon-scaffold_483-1510915933:80486..80607Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:80144..80323TCONS_00068372-exon-scaffold_483-1510915933:80144..80323Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:79722..79772TCONS_00068372-exon-scaffold_483-1510915933:79722..79772Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1510915933:77882..78269TCONS_00068372-exon-scaffold_483-1510915933:77882..78269Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:89101..89258TCONS_00068372-exon-scaffold_483-1491911889:89101..89258Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:84123..84190TCONS_00068372-exon-scaffold_483-1491911889:84123..84190Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:83172..83212TCONS_00068372-exon-scaffold_483-1491911889:83172..83212Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:82705..82786TCONS_00068372-exon-scaffold_483-1491911889:82705..82786Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:82229..82316TCONS_00068372-exon-scaffold_483-1491911889:82229..82316Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:81376..82018TCONS_00068372-exon-scaffold_483-1491911889:81376..82018Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:80916..81094TCONS_00068372-exon-scaffold_483-1491911889:80916..81094Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:80486..80607TCONS_00068372-exon-scaffold_483-1491911889:80486..80607Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:80144..80323TCONS_00068372-exon-scaffold_483-1491911889:80144..80323Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:79722..79772TCONS_00068372-exon-scaffold_483-1491911889:79722..79772Clytia hemisphaericaexon
TCONS_00068372-exon-scaffold_483-1491911889:77882..78269TCONS_00068372-exon-scaffold_483-1491911889:77882..78269Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_483supercontigscaffold_483:77882..89258 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.19602	1.35372	2.04777	1.82551	10.4818	7.14886	2.73474e-06	1.08727e-05	0	2.68034	3.37679	0.834536	0	0	0	0	0	0	0	0	0	0	1.84088e-09	3.73726e-09	0.00189915	0.510085	0	0	0	1.37331e-05
Blast
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BLAST of TCONS_00068372 vs. Swiss-Prot (Human)
Match: FOXP4 (Forkhead box protein P4 OS=Homo sapiens GN=FOXP4 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.127e-40
Identity = 80/158 (50.63%), Postives = 101/158 (63.92%), Query Frame = 3 
Query:  915 AHPEELIHRPAIEASAHPPGPPLTPKQEG-----GYHPVRRRGEAAAMVDIGHGKEDIGYQLRTKGNLYQDPNIRPPYTYASLIRQGVLDSPNGELTLNEIYNWFIKNFAFFRKNTSTWKNAVRHNLSLHKCFVRKENHKGAVWTVDDVEFFRRRMTK 1373
            + P+ L+H P    SA  P  PL P   G     G  P RRR               I  +L      Y++ ++RPP+TYASLIRQ +L++P+ +LTLNEIYNWF + FA+FR+NT+TWKNAVRHNLSLHKCFVR EN KGAVWTVD+ E+ +RR  K
Sbjct:  403 SFPDGLVHPPT---SAAAPVTPLRPPGLGSASLHGGGPARRRSSDKFC-------SPISSELAQNHEFYKNADVRPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEREYQKRRPPK 550
The following BLAST results are available for this feature:
BLAST of TCONS_00068372 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXP45.127e-4050.63Forkhead box protein P4 OS=Homo sapiens GN=FOXP4 P... [more]
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