TCONS_00068383 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068383
Unique NameTCONS_00068383
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1067

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068383 ID=TCONS_00068383|Name=TCONS_00068383|organism=Clytia hemisphaerica|type=transcript|length=1067bp
ATTGATTTTTAGGCGCCCCTCGATTAAGCAATAGTGCCCAGCTGGTCGAT
TTGGCTGATGCAAAAACAGTGCAATCGTATGTTCAGTTACTCACAAATAC
TTTATCGTAGTTCTAATCAAATTTTACATAGAAGAAGCAGGAATATACTC
CAACAAATAAGAAAAATGACAGGACAGTTAGagctttttcaaaacattgg
gTTGACCGAACAAAAGGCCAAAGAAACAGCCAAAAATAAAGGACTTGCTG
AAAGACtggaaaaattaatcaaacagACATCTGGCTCAGATGGTTCAAGT
GTTGACAAGTCAGTTGGAACCCTTTTGTACACTTTGGCGTCAGGTTCTAT
TGAGCTGGAACGACTCAAATTTGTAGTGGACTATGtgcaaaaaggaaaaa
ttgCCTCAGTTCAACAATTAAATGCTGCAACAACTTACCTCAAGAGTAAC
CCAACAACAAATGGAAATGACCAAGCTTTCAAATCAGCTTGTGGTATTGA
TGTTTCTTACACTCCTGACCAAATTGAAGATTGTGTGgaagaaattctta
aaaaacaCAAAGCTAAAGTTATTGAACAAAGATACCAATTCAATACTGGC
ATGTTACTTGGTGAAGTCTCAAAGAACTTGAAATTTGTTGATATGAAGAA
AGTAAAATCAGAAATCGATATGCAGcTGTTAGACTTGTTGGGACCAAAAA
CGGAAGCTGACAAAAACCCTCCCAAAAAGggtaaacaaaacaaagaagaa
gGTGGGAAGAAAAAGGAagtcaagaaagaaaaagaagcacCAAAAGTCCT
TGAtcggaaaacaattcaaaatatgatCGATCCAAAAACCATTTACTTGA
CTGGTGAAGCAGCTAAATTCCACAAACCTGgtgAGAATTACACCACAGAA
AATTACATTATGACACCCACAACAATGAATCATATGAAAGAACATTTGGA
CACTTACGGAAAACAAATTCGTACACGATTCCCTCCTGAACCAAATGGTA
TCTTACATATTGGACACGCTAAAGCTATCAACTTCAATTTTGGATATGCT
AAAGCTAACAATGGTAT
Run BLAST on NCBI

transcript from alignment at scaffold_483:348649..360531-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068383 ID=TCONS_00068383|Name=TCONS_00068383|organism=Clytia hemisphaerica|type=transcript|length=11883bp|location=Sequence derived from alignment at scaffold_483:348649..360531- (Clytia hemisphaerica)
ATTGATTTTTAGGCGCCCCTCGATTAAGCAATAGTGCCCAGCTGGTCGAT
TTGGCTGATGCAAAAACAGTGCAATCGTATGTTCAGTTACTCACAAATAC
TTTATCGTAGTTCTAATCAAATTTTACATAGAAGAAGCAGGAATATACTC
CAACAAATAAGAAAAATGACAGGACAGTTAGAGCTTTTTCAAAACATTGG
GTTGACCGAACAAAAGGCCAAAGAAACAGCCAAAAATAAAGGACTTGCTG
AAAGACTGGAAAAATTAATCAAACAGGTGATTACATATATCTCATTCAGT
CAGGAGTAATACCTTAAACAAGGCGTGTACCTTGTTTAGGATGTACCTTA
AACAAAGTACATGTATATACCTTGTTTAAGGTAGGGGTACCTTGTTCAAG
GTATTTTTTAAGATTTCCTCAAAAAACATCAATTTTAAATGTGTTAAGGA
AAAAGGGCATGTTGAATTTTAGCACAAAGGAAAGAGGAGTCCTTGATTGA
CCAAGTAGTGAAAAAATTATCAAAATCTACGGACGGAATCTTTTTTCTTT
TCATCTTTGTTTTATCTTTGGAACTAGGTTTGGAACCATAAATTCAGGGG
AAGAAGACGGGAAGCAAAGAAGAATAGTTAATAATACCTTAAGGGAAGAA
ATTTTCGCGGGAATTTAATTTCGCGGTTGGTCAAATTATTTTTTTCGCGG
GAATTTGATTTCGCGGTTCATCGATTTTCGAAAAATTCGCGGGAATTTAA
TTTCGCGGTTGCAGGATATTTTTGGCCAAAAGCGTTATTAAATAAACAAA
AAACAGGACCCTGCCGACGCACCGGACTTAACGAACACCGGACAGGCGAA
AGTTCGGTGTGAAATGAGAATTTTTTTTACCACCGGACAATTTCTACACC
GGACTTAAGGAAGTCGGAAGTCCGGTGTCGGAGAAGGATATTTTTTCCCA
CCGGACAATCAAAACACCAGACATGACCAGTCCGGTGCGCCCGGTGTTTC
TAAATTTTTTGTTTCATAAATGTCCGGCGTCCAGAATTCCCTGTATGCAA
CACCGGACTGGCACCAGACTTATTGCGTCCGGTGTAGCGAAAGGATACTT
TTTGCCACCGGACAAATACACCGGACAGTCCGGTGCGTCGACAGGGTCCT
CAAAAAACCTGTTTTCAGGCTTGAAATAGTACGAATTTGGGGGAATGCGT
GAAAAAAATTAAATTTCGCGGATTGACGATTTTGTAAAATTTCGCGGGAA
CTTAATTTCGCGGTTTTAGGCAAAATCCGCGAAAACCGCGAAATTTTGTT
CCCGCGAAAATTTCTTCCCTTAAGGTACCTTAAACAAGGTGTACACCTTG
TTTAGGATGTACCTAAACATGCATATACCTTGTTTCAGGTAGGGGACGAC
CCTCGACATGGCCCGAGAATTCTCTGGCCTCTTCGGGCCATGTTCGGGCC
GAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTCTATCAATCATTATGAT
TTTTCTATGAGGGCTAATCAAACAATTCTTTTTTCAGTTAGTAGATACTG
TTGTGCTAAACATTTATCAGAAGAATGAATGGATTTAAATCATTTTTTCA
TAAAAAAAATTACCATTGAATGGCAAAAAAATACTGTTTTCGAATTCTTT
TTGCCTTTCTCTGGTCACGTGACACGCTGATGACGTCATTTTGCAAATTT
TTTTCTATCAAAATTATCCTCATACTATGAGTGAAAAAGGGTGAAAACTT
GAGAGGACTAGGTTTAGTGATTCCAGAGATATTGAAGCATGAGTAAATGC
ATTCAAAAACTCGTTTTACGGCTCTGGGAAAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCATACCAAATAAGACATTTAATATTTATATGAATTTACAA
CATTCATATATTTAATATAATTAAGAGAAACCAAGTTTTTCTCAAAGAAA
ATGTTAAAAAAAATTCAGTCCTGAAATTACACGCCTGTTTAAATCATGTT
TTCAAAAATTGGCCCGAGTGTGGCCCGTGCGTGGCCTGCGTGTGGCCTGC
GTGTGGCCCGAAAACGGCCCGAATTCTCGGGCCAGCTCGGGCTTTACGCG
AATTCCATTAAAAGTTTTGGCCCGAGAATTCTCGGGCCATGTCGAGGGTC
GTGGTACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACAAACCCTTTACAAT
CTCATGCCAGTTATCCTGGGAATGTGTTCTAAATAGCGCAAAAAGATTCC
GGAAAAGTGGCAAGGAATCTTAGTGCAGAAATGGGGGAATCTTTATACAA
AACAATGGTAGATAATATTACCTATAGTATAAATAAGTTTTGCATAGTTG
GCAAATTTTGAGATTTTGAATGTTGGATGAGGTAGGCAGTAATGGCTTAA
ACTCATACAGTTAGTGGAAGTATTTCGATTTGTGAAGCGTCTTTACTACG
TCACACAGAACAAAAGAAAATAGCAGAAGAACAAAGGAATTACCCATAGC
TACCATTTCACAACCATGGGGGAATCGTGATTTTATTGAAATGGGAATCC
TCATATCGAATAAAGCATCTTCTGAAAATTTCATTCTTCCCCATAAATGC
GAAAATGAAAAACGAAGAAACTTTCGTTTTTCAATTGTCTTTTTAATCTG
CCATTAACAGGGATTTTTTCAAGCACTTTGAGCTACTACTGTTTGTGTAT
AATTAGATCGTTGCGAACGGTTAACCCGTTCGTCACGAATGGAAAAGTGT
TTGTGTGTCCGAATCGAACAGTTTCTGACCCAGTAGTGTTGTCTTTACTC
TTTATATACTGATTAAAAACAAACAATTGGCGTTTCTGAGAAAATTGCCT
TGAAACTTTTTTCTTGTAAAATCTTTTTTATATTTCGGATTGAGTTTCAT
AACTCAATCTTGGATTGAGTATTTTGCCGGTATACGGTAGTAAAAAAGTG
CTTAGAAAAATCCCTGCATTAAGTGTATAAAATTCCTTATTGAATGACAC
GTTCTTCTACTGAGAGGTTTAAAAAATGACGTAGAAACAAGAAACTGAAA
ATCAATTACAAAACCTACCTCACAACCATGGAGTGCTGACTTTTAGTTTT
AATGACTTGTTCTCACTTGTTTGGTTTCCGTGATAAAAAGAAAGTCGTTA
TTGTGAACTTTGAACATGCTTTAAATGAAGGTATTTCCACTAACTGTCAT
ATATTACAGGTTTTGGAGTGCAGGCTGATTTTACTTTTGTTTTCAGTGGT
TTCACTGTACCGCTGATTTAGGCAAAAAGGGCAATTTTAGGCTGGTCGTA
GAATACACAATACCTGCAGTTCTAGTTCTATTGTTATTGATTAATCACAT
GTTGGACGGTGAAAAAGAATGCCGCTATTATATTTTGATTTTTGATTATN
GGGATGAGGTAGGCAGTAATGGCTTAAACTCATACAGTTAGTGGAAGTAT
TTCGATTTGTGAAGCGTCTTTACTACGTCACACAGAACAAAAGAAAATAG
CAGAAGAACAAAGGAATTACCCATAGCTACCATTTCACAACCATGGGGGA
ATCGTGATTTTATTGAAATGGGAATCCTCATATCGAATAAAGCATCTTCT
GAAAATTTCATTCTTCCCCATAAATGCGAAAATGAAAAACGAAGAAACTT
TCGTTTTTCAATTGTCTTTTTAATCTGCCATTAACAGGGATTTTTTCAAG
CACTTTGAGCTACTACTGTTTGTGTATAATTAGATCGTTGCGAACGGTTA
ACCCGTTCGTCACGAATGGAAAAGTGTTTGTGTGTCCGAATCGAACAGTT
TCTGACCCAGTAGTGTTGTCTTTACTCTTTATATACTGATTAAAAACAAA
CAATTGGCGTTTCTGAGAAAATTGCCTTGAAACTTTTTTCTTGTAAAATC
TTTTTTATATTTCGGATTGAGTTTCATAACTCAATCTTGGATTGAGTTTC
ATAACTCAATCTTGGATTGAGTATTTTGCCGGTATACGGTAGTAAAAAAG
TGCTTAGAAAAATCCCTGCATTAAGTGTATAAAATTCCTTATTGAATGAC
ACGTTCTTCTACTGAGAGGTTTAAAAAATGACGTAGAAACAAGAAACTGA
AAATCAATTACAAAACCTACCTCACAACCATGGAGTGCTGACTTTTAGTT
TTAATGACTTGTTCTCACTTGTTTGGTTTCCGTGATAAAAAGAAAGTCGT
TATTGTGAACTTTGAACATGCTTTAAATGAAGGTATTTCCACTAACTGTC
ATATATTACAGGTTTTGGAGTGCAGGCTGATTTTACTTTTGTTTTCAGTG
GTTTCACTGTACCGCTGATTTAGGCAAAAAGGGCAATTTTAGGCTGGTCG
TAGAATACACAATACCTGCAGTTCTAGTTCTATTGATTAATCACATGTTG
GACGGTGAAAAAGAATGCCGCTATTATATTTTGATTTTTGATTATTTATT
GATTAATCACATAATATGCTAATATACATTATCATGATATTAGCAGGTGG
CCAAAAATAGTTGTTTGGGAGAACAGGTCAACTAAAGTTGTTTTGGCGAA
CGTGATGGTCTTTTTATTGGCATTTAAAAAAATCAGCAATTTGTCAATGG
GACAATCATTTCAAAATCTTTTTTTTTCAAAACAAAAAAAGTACTTGTAG
GGTTAGTAGCCAAGTAGCTAAAGGCTTGATAACAAGATAACATAGATAAC
AAGCATTTAGCTACTTGGCTTTAAAAGCTCTACAGATCAAAGAAAAATTA
TTATGAAAACTTTTCTCTTTGTTAAGTGTGTAAATGAAACTACTCATGAA
CAAAAATTGGCCAAGTATGCTGCTGACTTGATGCATTTTTTATACCAACA
ACCTAAACTCATACTGTCATTTTATTTCATACATTACAACCAATGAAGTT
TGGAGTACATAAGCAATATTTTACAAATCTAAAATAAAAAACACACAGGC
AAAACAGAAGTAAAGTAAAGTAAACCTTTTAGCGCCACAGGCAGAATTTC
TTTTCATTGAGATAAAAATTTCAATTTTTACCCATTCATATTTGAGGGGA
ACCCACCCCCCTTAAGAAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCCCCCCCCCCTAACTGGCAACCCATCCTTAGAAAATTCAAACTTTCA
ACACCCCCTTGCTTGGGTTTCATCAAAATCTGAGACCCCCCTAAATGTAG
GGAGGGTTAGAAATTACAGGAGATTATGATAAAATTAGATTTTTGTATCC
ATCAGATTTTATCTTTGGCATACTCACATGTTATGACCTACTAGGAGAAC
CTAATCTCCTCAGCTCTTGTAAGCTAACAACTTGTGATGTATGCACTTCA
GCAATGGTTCTTTTATAAATCAATTTATGTTTTTTTAGTTTATTTTGAAT
GCCCCATTAAAATCAGTCAGGGATTTCTCTCCATTGTACCTACACCAGTG
GTAGTCTTGATTTCTGTTTAGCATATAACAGATGCATAAGCTGGTTAGAA
AAGAAGATCTTAAAAACAGTTTCTGATCTATTGCAAAAAGAACTTAATAT
CTGTGTATTAAAATAAACTATATTTTCATATTTACAGACATCTGGCTCAG
ATGGTTCAAGTGTTGACAAGTCAGTTGGAACCCTTTTGTACACTTTGGCG
TCAGGTTCTATTGAGCTGGAACGACTCAAATTTGTAGTGGACTATGTGCA
AAAAGGAAAAATTGCCTCAGTTCAACAATTAAATGGTACACACAGATTTT
TTGATAATATAAATACCAACAAATACTGTTTTGAAAAAGAATTATCTGTA
CAGCACCTGTGACCCCGAGAATGTAGTACACCCCGAGAATGTAGGTTTCT
CATTTTTTAGCATTGTAGCCTTAACGATAGTTCAACTTCATGAAAAGTTG
TTTCAGAGCATACTGTTACATACTACTTATTATTTCTAGACATAAAATTC
TAACTGGGATTTATTTTTTCCAGCGAAAATCTGAATCGAAGTTGATTGGA
TACTACCCGAATTGAGACATTCTTTAAATAAATCCTCTCTAAATCGAAAT
CTATTGGAATTGAGTTATGATGATAGGATATTTTCTTATTCCTAATGAAC
TAAAGAAATTGGGAAAATAGTCCATTTCAATATTTATTGTTCTAAGTTAG
ATATTTTGACGAAAATGTTTGACCTACCTTTTGGGGTTATTTGACCTACA
ATTTGGGGGCCTTCATAACCCGACATAAAAAATCTCTCAAATTATATAAA
ACTTGCTTGTTGTACTTTCATAACATGAAAGTATTACCTGAGAGATGATT
AATGTTGACATTTTGAGCTTTTACGACGTGCCCCAGATTCGCTGGGACCC
CAGGTCAATCAGAAAATTTTGCCTAAGTTTGGAACAATAGAATTTCCATC
TCCATTGGGAATTTTTGGATCCGATGTGGGAAAAAGTTCCACCGGGGCTG
TGAGGCAGGGGTGTTGTTACATTATTCACATATTTTACCACAGAATTTTC
AACCTACAAAATAAATACAACTTTCTTGTCTCTTCTTTTCATCCTTTCAT
TTACTTTTCATCATTTGCAGCACGATGAAATTAATATCTTTGTTAATTTT
TTGTCAGAGTATATTTCTAAAGTATGAATTTCACTTAGAGAACAATAATT
TCCGATGAATACTAAAATTCCGCTCTCAACAACCGAATCTTTTCACCTAC
ATTCTCGGGGTTAAAAAGCGAAAAAATCCAATTTTCAGAATAACAAAATG
CTCTTTAGAATATTGTTTGGTATAAAATATTTCTAAAATTTGCTGTTATA
ACTAATCAGATTGAAAAAATATCAACATTATACTATTACTAGATTTAAAG
CCATAAAACCAAACCTACATTCTCGGGGTTATAACGAAAATGGGAGTCAA
CTTCAAGGACCAAAAAAAATAGCCTATCTATCAAAAGTAATAAAACTAAC
CCCTGGGAAAGGATTTTGGGAGTTCAAAATTTCGTTGAAAACATTCAATA
TCTTTTTAAATGCAAATCTACATCTTTCAGGTCCGATTCAAATTTCACCT
ACATTCTTGGGGTTAGGTGCTGTAGGCTTTGTAAAATAAAGCTAGCTAAA
CAAAATAATCATTTTCAATTTCGGTAAAAACTGAAAAAGTTATTTGAAAC
TTTAAAGTTTATGCAGCTCAATTGTGCTGACATTTTTAGACATTTTTTAT
TATTTCACTTATTTAGCTGCAACAACTTACCTCAAGAGTAACCCAACAAC
AAATGGAAATGACCAAGCTTTCAAATCAGCTTGTGGTATTGATGTTTCTT
ACACTCCTGACCAAATTGAAGATTGTGTAAGTTTATAAAACATGTTTGAT
AATTTCACTCATTTCAAAGTGGCATGTTTTTACGTCTTAAGGAATATTTT
TTTTGAAATTTTAAAAACATATTTCTGGCCACAGTTAGACAACAATTGAA
GAGGTATAGGCCTTTTGAAACAATTGTTCTTAATTTGTATCATTAACTTT
ATTGTTTAAAAGGTGGAAGAAATTCTTAAAAAACACAAAGCTAAAGTTAT
TGAACAAAGATACCAATTCAATACTGGCATGTTACTTGGTAAGTGTATCA
TGAAGTAGATTAAAATATCATTACAATTTTGGCTTTTACAATTTGAACTT
TCACTCTGTTAAACAAAGGTTACCTGAAACTATTCTCATAACTCTTCATC
CATTCTGCACATACCACGCTCTGCTCTAAAAAAATGAGGGAATGTAAAGA
TCTGACCTGGTTGTTCAGCCAAAAAAATTAAAACCGCGTTACTTTTTGCT
TGAAAACGAAAGCGAAAGTGATTGGCTCTAATGTTTATGTTTATGATTGA
ATCTTAGTTTAGTTGCGAATGTTTTGCTTAAGCCAATCACTGCGCTCAAA
AGCTCATTTAATATGTATTTTGAATCTGGATGAAATTTGCTGTTTTTGAC
ATTGAGCAAACTGAGCATTTTCCCCAAAGCATGTTTTGCTCTTGATTGCT
CAACTTAAGTTCAACTGTAAGCTTTTTAACACTCATTGATCACTTCTCTT
TTGCTTTGATATTTCAGGTGAAGTCTCAAAGAACTTGAAATTTGTTGATA
TGAAGAAAGTAAAATCAGAAATCGATATGCAGGTAATATTGAAATATATA
CCATCTATATCTATTTATTAAGGAGTGGTGACCGAGTGGTCAAGGCGTCA
GCACCTGAAGCTTGGGGTTCCCGGTTCGAATCCTTGCTTCTTCCATTGTT
CTGATCAGTTCAAAGATCAGCTACCTTGAGGAAAAGTTAAAACAATCGAA
AGACTGCCTGAAAAGTCTTAGGTTACTGGGCTATCTACGTAGAATACTCT
ACCTATCTATATAAGAAGGGGTTTATCAAAAGAATCCTGAACGACAAATT
ACGCATGCGTGTTACAATGCAGGATTCTTTAGAGGAACAGACTGTAAAAT
ATCAACTCTGCCTATGTACACAGTTCTTCTTCCCCTTTTTTCCTTTACTC
ATAAAATTTCCATTTTCTGATATTTCTTTCTTTTAGCTGTTAGACTTGTT
GGGACCAAAAACGGAAGCTGACAAAAACCCTCCCAAAAAGGTTTGTATTG
TCTGCCTCCAAAAATGACTTGATAAACATGACTGAACCAAATTAACCGTG
AATAATTTTTTATCTAACAAATAAGATTACTTGCATTTCAAATCTGTATG
ACTAAATTCAACCAAATTATAATACCTTATTACACGAAAATAAGTAGACA
TGTAGTTAACACGAATCAAAAATTTTTGTGTTAATTAAAACCCCTTTGAT
TAAAACCAGCCGTGGTGTCCTTGAAAAAACAAATAAAATTCATGTTTATT
TTTTGCGTGTTAATTTCAAGGCCGTTGAATACTTGCCTACTAATGTTCGT
GTAATAAGGTTATATTTATATTGGGTAAAACTTGTATTGGGGAAACAGGG
TAAACAAAACAAAGAAGAAGGTGGGAAGAAAAAGGAAGTCAAGAAAGAAA
AAGAAGCACCAAAAGTCCTTGATCGGAAAACAATTCAAAGTAAGTCCTGT
CCTAAATTATCCGCTTAAGATTATCTTTTCAACAAGGTGTTACTTTTAAT
TATAACATTGCTCCTTCCTGCTCCTTCAAGGGCAATGTGTTAAAATGTAC
GAACTGCGAATTTTTTGGAATAGACTTTAATAAGTAATTAAATTCATGGA
AGATTTTGAATTGTGTTTCATTGTATAAATTTCCACAGTAGATGATTCAC
TTAATTGTTTGTTTTGTTGTTTCATTTTCAGATATGATCGATCCAAAAAC
CATTTACTTGACTGGTGAAGCAGCTAAATTCCACAAACCTGGTACGGACT
TTATTTTGTTTCATAAAAAATATTTGCTCACTCGTTGTTCAAAAGTGGAT
TAGTGACCGGTTAACTTAATATTTTATTAAATTTCGATTAGCGCCGATTA
GCACAGAACCGTTGGTTGTTCGAAAATCCCGATTAAAAAGACAAAATTTT
AATCCTGCTCTGACCCAGGATTAGCGAGGATTAAGAAGCTTTTTCCTACG
AAAAAACTGAATTCGCTGAATTGAAGTGAGCACAACCTGGCCACAAACCT
GGTATGGACTTTATCTTGTTCAAAACTTGTTAATGATTTCATTTGATCTA
ATGAACTAACGATACAAGTAATGACTTCTAGCCCATGACACTGCATGTCA
TATAAAATCAACTTTTAAAAATCATGCAGGCTCGTGAAATTTCGTATATG
GTGAAGATTAAAGGTCTGACCTTAAGAAAAGTGCTATAATTATGTGTTTT
TGAATAAACAAACCTTCACTTAGTTAAACCATAGAGTTTGTTTCCCCCGC
GAAATATTTTCACCTTGTGTATTGAAAAGTGTATGACATCCCTTAACAAA
AGAATCTGGAAGAATGTTTTCTTTAAAGGTTTTATTTTTACATAAGTGTT
CCCGTTTCATATCAGAGAGGACAGTGTCTGCCTATTGTGCTGTTATATTG
TGCTGATATAAGCAAAAAAATGATTTTCCTTTCTTCTCTCTGACCAATCT
TGTTCCACATCCGTGTCAATTCAATGTGAAAAAGCCAGTGGAATTAAAAG
TGATGAGTAAACAAACGATATCACTCCTATTCAAAAACTAAACCTTTAAA
ACCTTTGCTAACGCTAACGATCTTATATTCCTTTAAAAATCTTCAGGTGA
GAATTACACCACAGAAAATTACATTATGACACCCACAACAATGAATCATA
TGAAAGAACATTTGGACACTTACGGAAAACAAATTCGTACACGATTCCCT
CCTGAACCAAATGGTATCTTACATATTGGACACGCTAAAGCTATCAACTT
CAATTTTGGATATGCTAAAGCTAACAATGGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042675XLOC_042675Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068383-exon-scaffold_483-1575043694:360256..360531TCONS_00068383-exon-scaffold_483-1575043694:360256..360531Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1575043694:353297..353444TCONS_00068383-exon-scaffold_483-1575043694:353297..353444Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1575043694:351706..351815TCONS_00068383-exon-scaffold_483-1575043694:351706..351815Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1575043694:351444..351519TCONS_00068383-exon-scaffold_483-1575043694:351444..351519Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1575043694:350900..350964TCONS_00068383-exon-scaffold_483-1575043694:350900..350964Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1575043694:350442..350495TCONS_00068383-exon-scaffold_483-1575043694:350442..350495Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1575043694:349993..350083TCONS_00068383-exon-scaffold_483-1575043694:349993..350083Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1575043694:349691..349750TCONS_00068383-exon-scaffold_483-1575043694:349691..349750Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1575043694:348649..348835TCONS_00068383-exon-scaffold_483-1575043694:348649..348835Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:360256..360531TCONS_00068383-exon-scaffold_483-1510915933:360256..360531Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:353297..353444TCONS_00068383-exon-scaffold_483-1510915933:353297..353444Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:351706..351815TCONS_00068383-exon-scaffold_483-1510915933:351706..351815Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:351444..351519TCONS_00068383-exon-scaffold_483-1510915933:351444..351519Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:350900..350964TCONS_00068383-exon-scaffold_483-1510915933:350900..350964Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:350442..350495TCONS_00068383-exon-scaffold_483-1510915933:350442..350495Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:349993..350083TCONS_00068383-exon-scaffold_483-1510915933:349993..350083Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:349691..349750TCONS_00068383-exon-scaffold_483-1510915933:349691..349750Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1510915933:348649..348835TCONS_00068383-exon-scaffold_483-1510915933:348649..348835Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:360256..360531TCONS_00068383-exon-scaffold_483-1491911889:360256..360531Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:353297..353444TCONS_00068383-exon-scaffold_483-1491911889:353297..353444Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:351706..351815TCONS_00068383-exon-scaffold_483-1491911889:351706..351815Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:351444..351519TCONS_00068383-exon-scaffold_483-1491911889:351444..351519Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:350900..350964TCONS_00068383-exon-scaffold_483-1491911889:350900..350964Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:350442..350495TCONS_00068383-exon-scaffold_483-1491911889:350442..350495Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:349993..350083TCONS_00068383-exon-scaffold_483-1491911889:349993..350083Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:349691..349750TCONS_00068383-exon-scaffold_483-1491911889:349691..349750Clytia hemisphaericaexon
TCONS_00068383-exon-scaffold_483-1491911889:348649..348835TCONS_00068383-exon-scaffold_483-1491911889:348649..348835Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_483supercontigscaffold_483:348649..360531 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
41.5836	36.2179	10.0646	6.63142	84.9707	59.5729	98.8565	112.18	66.3962	78.8467	67.0372	59.8096	61.5537	57.5237	57.5123	67.4657	53.3866	60.8607	26.9636	40.4221	38.5277	44.2038	50.5745	54.9306	81.164	76.843	33.9139	31.5951	43.193	36.2278
Blast
[Close]
BLAST of TCONS_00068383 vs. Swiss-Prot (Human)
Match: SYQ (Glutamine--tRNA ligase OS=Homo sapiens GN=QARS PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.424e-78
Identity = 142/305 (46.56%), Postives = 196/305 (64.26%), Query Frame = 1 
Query:  178 LELFQNIGLTEQKAKETAKNKGLAERLEKLIKQTXXXXXXXXXXXXXTLLYTLASGSIELERLKFVVDYVQKGKIASVQQLNAATTYLKSNPTTNGNDQAFKSACGIDVSYTPDQIEDCVEEILKKHKAKVIEQRYQFNTGMLLGEVSKNLKFVDMKKVKSEIDMQLLDLLGPKTEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDRKTIQNMID-----PKTIYLT----GEAAKFHKPGENYTTENYIMTPTTMNHMKEHLDTYGKQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNG 1065
            L LF ++GL+EQKA+ET KN  L+ +L +   Q   + GS++DK+ G LLY LAS   +  RL F+V Y+   KI +  QL+AA  Y++S+P    +   F+  CG+ V  TP+QIE+ VE  + +H+ +++ +RY FN G+L+GE    LK+ D K +K+E+DMQ+L LLGPK EAD     K  + + E                 DR+T +++++      +T+ L     GEA KFHKPGENY T  Y++TP TMN +K+HL+  G Q+RTRFPPEPNGILHIGHAKAINFNFGYAKANNG
Sbjct:    7 LSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLASRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPEQIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPKLEADLEKKFKVAKARLEET---------------DRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKTPGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNG 296
The following BLAST results are available for this feature:
BLAST of TCONS_00068383 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYQ4.424e-7846.56Glutamine--tRNA ligase OS=Homo sapiens GN=QARS PE=... [more]
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