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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068426 ID=TCONS_00068426|Name=TCONS_00068426|organism=Clytia hemisphaerica|type=transcript|length=1158bp
gatttgtgtattgaaagtttttcatttgagttgatttcgttttgagagtt
tgttgttgcttgataaattgttttctcgctacgcaagtttctgcgtagct
agccgctgtatctataaggctggaacaccggattcttccagtcgtttata
caaactaaatcccgtattattattgttagtattggtattattagtattac
acgcattataaacgactccagtctaccctTCAATAGgaaaatcttttcat
ttttaagaacTGTAGAAATTTAACAGGCAAACTActgctattttaatgaa
aatgacaattttaagaatttttagcACATTTAGATATTTAAAGATAATCA
ACAACATTCTAGGGATTAGTTAGTTTATGCATAATATTATTAGTGTCATT
AGTTCTTTTATTACAAATATGACTTTTCCCTTTTTATTTGACACCCTGAC
TTGATGGAGGAGAACACGGTCCAGGCTTCTCTAAATTCCCTATATAAAAT
ATTCGTGATATGTAGCATTGCAATGTTTTCTGGTATTACATCATGGactc
aacagctgattggttgtaagtgacgtattgaaggattttacgtcacttgc
aaccaatcggCTGTTGTGTCCATGTTGAACGTCAGAAAACATTGCTAAGA
TGCACATCGCTCTACCCAAAACTAAGACTCGTGAAATATCTTTTAAATGG
GAAACTATCATACTTGCCTGTAAACAGACCAAAAGTTCAAATTCATTGTC
GTACTATGCTACGTTATACGTGATATACGCTCTGGTACAAAGTACTATTA
AACCTtcattttttctgtattttttttgTTGTCTTTCACTAAGCAATGCA
TTTTTAGTTTAGGTTTTATCTCGTTTCATTTTTTTAAGTTCCTTTTTCCT
GGTATAttccttcttttttttaagTAGTAAATTCTATGTAAAAAGAACTT
TTTAGTTTATTTATACGTAAACTATTATTGTGAATAAATCTAATAAATAT
TACctttttttgcccatttttttgttattgtattataataatgaaaagaa
tttgaaaaaaaagatttcatcagaaattttcaatttgaattttgtATTGT
AATGTAATGACCATCGGTAATTAACTTTAAcacattaaaggttttatttt
tacataag Run BLAST on NCBI transcript from alignment at scaffold_483:505466..506623 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068426 ID=TCONS_00068426|Name=TCONS_00068426|organism=Clytia hemisphaerica|type=transcript|length=1158bp|location=Sequence derived from alignment at scaffold_483:505466..506623 (Clytia hemisphaerica)
cttatgtaaaaataaaacctttaatgtgTTAAAGTTAATTACCGATGGTC
ATTACATTACAATacaaaattcaaattgaaaatttctgatgaaatctttt
ttttcaaattcttttcattattataatacaataacaaaaaaatgggcaaa
aaaagGTAATATTTATTAGATTTATTCACAATAATAGTTTACGTATAAAT
AAACTAAAAAGTTCTTTTTACATAGAATTTACTActtaaaaaaaagaagg
aaTATACCAGGAAAAAGGAACTTAAAAAAATGAAACGAGATAAAACCTAA
ACTAAAAATGCATTGCTTAGTGAAAGACAAcaaaaaaaatacagaaaaaa
tgaAGGTTTAATAGTACTTTGTACCAGAGCGTATATCACGTATAACGTAG
CATAGTACGACAATGAATTTGAACTTTTGGTCTGTTTACAGGCAAGTATG
ATAGTTTCCCATTTAAAAGATATTTCACGAGTCTTAGTTTTGGGTAGAGC
GATGTGCATCTTAGCAATGTTTTCTGACGTTCAACATGGACACAACAGcc
gattggttgcaagtgacgtaaaatccttcaatacgtcacttacaaccaat
cagctgttgagtCCATGATGTAATACCAGAAAACATTGCAATGCTACATA
TCACGAATATTTTATATAGGGAATTTAGAGAAGCCTGGACCGTGTTCTCC
TCCATCAAGTCAGGGTGTCAAATAAAAAGGGAAAAGTCATATTTGTAATA
AAAGAACTAATGACACTAATAATATTATGCATAAACTAACTAATCCCTAG
AATGTTGTTGATTATCTTTAAATATCTAAATGTgctaaaaattcttaaaa
ttgtcattttcattaaaatagcagTAGTTTGCCTGTTAAATTTCTACAgt
tcttaaaaatgaaaagattttcCTATTGAagggtagactggagtcgttta
taatgcgtgtaatactaataataccaatactaacaataataatacgggat
ttagtttgtataaacgactggaagaatccggtgttccagccttatagata
cagcggctagctacgcagaaacttgcgtagcgagaaaacaatttatcaag
caacaacaaactctcaaaacgaaatcaactcaaatgaaaaactttcaata
cacaaatc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068426-exon-scaffold_483-1491911889:505466..506623 | TCONS_00068426-exon-scaffold_483-1491911889:505466..506623 | Clytia hemisphaerica | exon |
| TCONS_00068426-exon-scaffold_483-1510915933:505466..506623 | TCONS_00068426-exon-scaffold_483-1510915933:505466..506623 | Clytia hemisphaerica | exon |
| TCONS_00068426-exon-scaffold_483-1575043694:505466..506623 | TCONS_00068426-exon-scaffold_483-1575043694:505466..506623 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_483 | supercontig | scaffold_483:505466..506623 . |
Blast
The following BLAST results are available for this feature:
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