TCONS_00068624 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068624
Unique NameTCONS_00068624
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1852

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068624 ID=TCONS_00068624|Name=TCONS_00068624|organism=Clytia hemisphaerica|type=transcript|length=1852bp
GAAGCAAGTAATGTGgatttttaatactcaaattcAAGTTTTAGCATCTA
GTATTACCTAGTATTACctgaaaaaaagttaataatCGGGTCTGTCCCTT
TTTCATTAACAAGAAATGCTTGCACATTTGCATGGCAACTATAAAAATAT
CCCCATTAGGATCCACATTATAAGAAGTACAATGAAAACTCAAGAAAGTT
TAGTCTAATCAGTCGATAAGACACTTCCTTGTTTGTGCTTATGCTTGAGT
TCTTATAAACCTGAgattttaattcttataaaaattttacATTCCAGAAA
AAGTAAAATGTAAAGCAGATAATAAACAATGTGTCTGATAGTGGTTTGAT
TATATAATCAATTATAATATATACCAAAATCTCTACACAAGACAACCACG
ATGAACAAATTAAAGTCATCACAACGTGACAAGGTCCGGCAATTCATTTC
TTTCACCAACACTGGCGAGAAGACGGCAATCTTCTGTTTGAGTTCTCATG
ATTGGCGAATGGACATTGCTACGGACAATTATTTTCAACACCCAGAACGT
TACTTCAAGGAGAATAGCAAAAGTTCCTCCTCTGATAAAAATCGAATcga
caagaaaaaaattttacacttgtttgaaaaatataaagACCCACATGAAG
ACAAAATGCTAGCCAACGGTTTATCCAAATTCTGCGAAGACATTGATCTG
GATCCAGCAAGTTTTGAAATCTTGTTAATCTGCTGGAAATTCAAAGCAGC
TGTTCAGTGTGAATTCACAAGGAAAGAATTTACCGATGGCATGTTAGAAT
TAAGTGTCGATAGCTTGGATGggttgaaaagaaaaatgccCAGTGTAGAA
CAAGAGTTAACAGACGCTGCAAAGTTTCGTGATTTATATCAATTCACTTT
CAATTTCGCTAAAAATCCTGAACAAAAAGGATTGGATCTAGAAATGGCGA
TTGCTTATTGGAATATTGTGTTCAAGGGTCGCTTCAAGTTTCTCGAATTA
TGGGTGCAATTTCTTACTgaaaatcaaaaacattctaTACCAAAAGACAC
GTGGAATTTATTGTTGGATTTTTCTAATTCTGCCAACGATGATATGTCGA
ATTACGATGAAGAAGacGCATGGCCTGTTTTGATCGATGATTTTGTAACA
TGGTCCAAACCCAGGATACAGAACAAAAAAACAACGCTGGTTTGAAGCAG
GGAAAGTTCAAAGAAATTCAAATAAATCTACgatcatcaaattttgaaga
agATTCACACTACAGATTTTTCTCCATTGAAATGAGATGGGTTTGTTGTT
GTCGCAGGTACCTTGAGGAATGAAAACTCTTCTCATAGGTTATCTTCGCA
CTGCAAACGCCTATAAGAGAATTCTTATATCAAATCCGTCctttaagacc
atgttcacacgttacggttccgtttcgctctaGTATGATTTTCTTTACtg
atcgagagtgttcatattggtttcggaatgtttcggagcaagaaaacgaa
gcagttccgttccgataaAAAAAGTGGAGCAAAACCTtctcgatctgttt
tgctttgttacgttatcttttttgacgtttcgaattttgacgttcacact
agTTTCGGAatcgtttcgtttcgtttcgtttaGTTTCGTTTCggaccgta
acgtctgaacatgatcTTAATCAGGATTACGTTTCCATCATCGTTTATGC
TACCAAGTAGTCAATGTAAATAGGTCACGTTCGAAATGAGTAAATTGTTT
TGGTTATAGTAGTAGGGTAgtataaaaaataacttttttaaacaaaatgt
atattgttaaaaagaaacaatttttataCGCAATGGAAAGAGCTGTTGAC
TC
Run BLAST on NCBI

protein sequence of TCONS_00068624-protein

>TCONS_00068624-protein ID=TCONS_00068624-protein|Name=TCONS_00068624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
MNKLKSSQRDKVRQFISFTNTGEKTAIFCLSSHDWRMDIATDNYFQHPER
YFKENSKSSSSDKNRIDKKKILHLFEKYKDPHEDKMLANGLSKFCEDIDL
DPASFEILLICWKFKAAVQCEFTRKEFTDGMLELSVDSLDGLKRKMPSVE
QELTDAAKFRDLYQFTFNFAKNPEQKGLDLEMAIAYWNIVFKGRFKFLEL
WVQFLTENQKHSIPKDTWNLLLDFSNSANDDMSNYDEEDAWPVLIDDFVT
WSKPRIQNKKTTLV
Run BLAST on NCBI

transcript from alignment at scaffold_486:165329..173005-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068624 ID=TCONS_00068624|Name=TCONS_00068624|organism=Clytia hemisphaerica|type=transcript|length=7677bp|location=Sequence derived from alignment at scaffold_486:165329..173005- (Clytia hemisphaerica)
GAAGCAAGTAATGTGGATTTTTAATACTCAAATTCAAGTTTTAGCATCTA
GTATTACCTAGTATTACCTGAAAAAAAGTTAATAATCGGGTCTGTCCCTT
TTTCATTAACAAGAAATGCTTGCACATTTGCATGGCAACTATAAAAATAT
CCCCATTAGGATCCACATTATAAGAAGTACAATGAAAACTCAAGAAAGTT
TAGTCTAATCAGTCGATAAGACACTTCCTTGTTTGTGCTTATGCTTGAGT
TCTTATAAACCTGAGATTTTAATTCTTATAAAAATTTTACATTCCAGAAA
AAGTAAAATGTAAAGCAGATAATAAACAATGTGTCTGATAGTGGTTTGAT
TATATAATCAATTATAATATATACCAAAATCTCTACACAAGACAACCACG
ATGGTAAGTTTAGCTATTTTTTTATTGGTTAAGCTTTAATAAGGAAATCT
TTTACTCTTTTATTTTGTTTTACTGTATACCTTATTTCTGAGTTCTACAT
GGTTGTATATATTACATGAATATAAGTATCTATGGAAGTATTTAATGCAT
TGAAATTAACACAACATCAAATTAACACAAATGAGCAAGTTTTAACTTTA
GGATAGACAGGAGATAGGAGAGCTTGTCTTTGTATTTAAATCTGATGTTT
ACTTGACTGGTCAGAGCTGTGAGTCCATTTACAGACTAAAAAGCAAAAAA
AGCTCATTTTGTCGCTGGACTCACTTATATTTCATTCGGAAGTGAGTGTG
ACCACCGGCACAATAAAGTATTTTGATTGGCAGATTCTTATCAACGGTTT
TTTGGTGGGAAATTTGAAACTTTCAAATCCTCAGCTCTGGCCATGCTATT
CATTTCGCCATCAGTATATAAATAAAGAAATCATAGCATGGATCTCCAGG
CTAACTTTAGGAGTGAGCCTTCAAAAATTAACAAGGTTTTTATTAAGACT
AAGAGGAAAATTTTCTATTTGTGTTAATTACACATCTCCTAATATTCATG
TAATAAGGTACACATCTTTTTGGAGCAACCAGATGGCTAAGGCTTGGGGC
CTTGAAATCTGCCAATGATTTCCCTCCCAAACAAGTTCTTGGTAGCAGAG
AATTGGCCTCAGATTTTAGACATTTTGTCAGTCCACCATCCAAAGCCGGT
TGCAATACTTTAATAAAGAGGTTTTCAGATTGACTGAGTTGCATAAATTC
TGCCATTGTGTATGCAAACTTTTGCGTAAGGAACTGCCTCTACAAATTGA
AACGTTTTCTTCCATAAAGCTTTTTTCACATGTACGTAAAATTTTACTTT
AGACCTTACGGTAAATCGTTCGTAAGGCTGTCTTTTGGGAATTTCCCCGA
CATTATGTAGAGTTTTTGTTGATTAAGAGGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAAGAGGGTCTTACGTGACTTTTCCTTCCGTTCAAAACTTTTTGA
ACGTAAGCAAACTCTACATAAGGTCTTAAAACACTACGTAAGCTTAGGGA
AATCCCCCACCCTTCAAGGTCTTAAGTAAAATTTTATGTACATTACATGT
GAAAAAGCTTAATAGTGGATTTTCCTTGAGTAACATAACTTTGACAGAAC
CTGAAAAGCCTCTAAACTATCTCTGAATTGTCAAATTTTCGTCATCTTTA
TTTTTAATTGAGTAACTTTTACACCTGTGACTTTTATCTTTGTAGAACAA
ATTAAAGTCATCACAACGTGACAAGGTCCGGCAATTCATTTCTTTCACCA
ACACTGGCGAGAAGACGGCAATCTTCTGTTTGAGTTCTCATGATTGGCGA
ATGGACATTGCTACGGACAATTATTTTCAACACCCAGAACGTTACTTCAA
GGAGAATAGCAAAAGTTCCTCCTCTGATAAAAATCGAATCGACAAGAAAA
AAATTTTACACTTGTTTGAAAAATATAAAGGTATACATCATTCAGTCCGT
TACAAAGCGATTGCAACTTTTTTATCTTCTTTTTATTAAATAAACCATCT
GTTTGGATATTAATTGAATTCAAATAGGAATGGTTTTGACCTTCTTTCAA
AGGTTGACCTCAACGGGTAGAACCCCCCCTTGATCAAGTGGGATGGGCTT
GGAGCAAAGATCTAGTATAGGGGGAAACTTTTATTTAGCTAGCGAGAGAG
TAATTTAGGTTAATAGAGAGCAGGCGCAGAGGGACCTTATGCTAAGGAAT
AATACCCAAATCTAATTGAAACTCTTTTAGGCACCTACTCTAATAAGTGC
TCCCTAAAAGTTCTTTGCCATTATATTTTTCTCCCAAATCCCAAAAAATG
CTTATTTGAATTTTAAATTTTTGCCCGAAAATATTTAATTCTTTACCCTG
GTTTTAAGTTTTTACAACCCTTTCCAAAGCCTTTGGATTTCAGATGGAGA
GGATTTTGGAGATAGTCATTCTAGCTGCCAGAAAAATGTCTAGTTAGATT
ATTCTAACATATACTTTTGATGTTTCAACAAAAGTTTCATATGTCACTAT
AAAAATCAATTTTCGTAGTTTTAGAAGGAACTTTTTAAGCTTTATTGTCA
GGAAGAGCTGCAATCACTTTGATTATATTTTGACTGAATTCTGGCATCAA
GATACTATGGTTTGAGATTATAATAGTCTCATTATCAAACAAAGCACCTT
ATCTCTAAAAAGTGTGTCCCATATTTACCCCGTAGTGAAATCTTAATTTT
GGGGTAATTATGGGACACTAAAGTTTGAGTTTCAAGTGTTTATTTTTTAT
AAGAAAATTACAAACTTGATTTTCTAGTTTAATGGAATCATAACTACACT
CTAAGTCTTTCAAAACCTGCAAAGGTTTGCATCTAAATTTACTTCAGTTG
GTCTAGATTGCTCTATACAAATATTACTGTTTAAGTGTCCCGTTATTACC
CCCAAATGGGAAAAAATCTGGGGTAAAAACGGGACACTGTCACTATTTTT
GTTGAAAATCCTTTAAATGATATGTATGTAGCACTTGGATTTGAAGTCAT
CAAGTGAATGCAAAACCTCAAATATCATGACCCTTTGGAAAGATATCTGG
ATTTTTCAATAACATTTTATACCTGTCCCATATTTACCCAAAGGATGTCC
CGTAATTACCCCCAAAATGCGGAGTAATTACGGGACACCTTTAAAGTAAA
TTTTAGGAACATCTACTAAATTTCAAGGAAAAGTAATACATCTTATGTAA
AGGTCATACTTTGAAAAATAAAATATCAAAAGATCGGATCTCTAGGATTA
ATACTTTCAGAGTAATGCCCAAATAAGTCAAAATCGTCCCGTAATTACCC
CAGATGACTATACACTTGTTCCTTGGGTAAATCTCATCTGGTGGACAATT
TTTAAAAATTTAGATTTTCGGGGTCTGGGGACGAGTTTATGCACCTTAAA
TGAAGTTAGAACATATTCTTAGTTGATTATACTTCTAGAACGCTCAGATT
TTTTTCATCAAACTTACCTATTAATCTTATAATTTGAGCCTACGAATGAT
GCAAAATAATTTGAGCCCACATTCGACAGTACCAATATTTTCTTCTCGTT
TTTAACGAGTTTATAAATACTTGATTCTCATGTTATTTAGACCCACATGA
AGACAAAATGCTAGCCAACGGTTTATCCAAATTCTGCGAAGACATTGATC
TGGATCCAGCAAGTTTTGAAATCTTGTTAATCTGCTGGAAATTCAAAGCA
GCTGTTCAGTGTGAATTCACAAGGAAAGAATTTACCGATGGCATGTTAGA
ATTAAGGTACATGATTTTTTATAAACATTGCATTCATGATATGGCAAAAA
AAAAATAGCATTTGCTCAGCATTACGTGACCCTACATTTTCTGATTTTTG
CTGTTTTTGGCTAGATTTTACGGATATTTGGGATTTCCCTAAAATTTTGC
TTAGTAGGATGTAAGCATCCTTCAAGTATTTTTCAGCCTTGTCAATCTCT
AGGTCCAAGCCACCTCCGAGCCATTTATTGGAACTTTATGTGCTTAATAA
AAAGAAACATGCTACAAAAATGAAGAAAAAAAAATTTTTGTAAACATTTT
CTAGTTGTATGTAAGGAGTTTGTGTATTTTTATGTTGTTCTAAAAATGCG
TTTTTAGATAAGTGCTGAATCTGGCTGAATGTATTACTTTGCTTAAAATT
AATATAAGGCGAGGCCACTTTGATTAGTTGTTTTACGGGCTCGACCGACC
CTGAAATTCCTAAAATTGAAATAAAAACTTTGGTAGTTTTTCCATGGTTT
CGAGAATTCTATGTTCAATTTTTGATTTTATACATGAATTCGAGCTTTTT
GTGCCTTTTTATTTTCTATTTCGCATTTTTGTTAAGATGTAGCAGTTTTT
GCTGCCTTTTTAGGAGATTTTAAAGGTGAAATTCTACTTTTATTTTTATT
TTTTTGCCGACCGACCGACCCTCTTTTTTGGGTAGCTTAACCCATAAAAC
AACAAATTAAATTGACCTCGCCTAATCAATTCTTTTCATGTCTTTTTATC
TGTCCAGTGTCGATAGCTTGGATGGGTTGAAAAGAAAAATGCCCAGTGTA
GAACAAGAGTTAACAGACGCTGCAAAGTTTCGTGATTTATATCAATTCAC
TTTCAATTTCGCTAAAAATCCTGAACAAAAAGGATTGGGTGAGAAAATTA
TCTTTTCCCAGTATTTCAATGCTTTATTATACCTTTTTTATATCGATGAT
TGTATTGCTCTATAGTACTGAGAATCGCTACCAGTAGCAAACATCAAACT
GGATAATCAGATGGTCAGATGGTTTGAGATCTTTTGACTTAGATTTCATC
CATGATCCTGAGAAAAACCTTTATATCTTTCTACCTGACTCCTTTCCTCC
AAAGTCATGAAAAGTTAATTTGACATTTCTAAAAATGGGTTCTTACACGG
TTCTTACGTTAGAATATTTTCATCCTAAAAGCCAAAAACTTTTCACTGGA
ATATCTTGGCTTTGGAAAAGAGGTTTGGAGGTTTTGCTGGGAATTGTAAG
AATCTACAGGCAAAACATCTAAAAAAATCTAATTAGTCCCTTAATTGTAA
TTTCATTAACAATCATATACTTTGTTTCAGATCTAGAGNCTAATTAGTCC
CTTAATTGTAATTTCATTAACAATCATACTTTGTTTCAGATCTAGAAATG
GCGATTGCTTATTGGAATATTGTGTTCAAGGGTCGCTTCAAGTTTCTCGA
ATTATGGGTGCAATTTCTTACTGTAAGGATTTTTTTGGTTTTCCGACTAG
ATCTACTTGTTATGTTATAGTCAAACATTTATTAAAATCAGATACTCCTC
AGAAACGTTTTAGAATACATCAGGCCTACAAACTTTTGCGAGCAGAAACT
TTCGCCCTTTTCGCGAAAGTAAACGTCTTTGAAAATTCTTGATAGAACCA
TTCGCGAGTATCAAGTAAATTTTTTACGTGACAAAAGTTTATGCTAGCGA
AAAGTTCTTACCATAATAGAATAACTGTAAAACTTCTAATTTTAAATAAA
TCGTAGGGATTATACAGTAGACTTTCGGTTATTCGAGACTGCCTATTCGA
ATAGGCAGTCTCGAATCCCCTTGGATTTGCTTACCAAACTCACGCAAAAA
CACTCTTAGCTATCCGAACTTATTCAAACTCTCAGTTACTCGAAGCATTT
CTATATATATTCTGTCAAATTTGCGAAAGTCAATCTCGTAAATGTAGCGA
TTTTTCGACCTCGTGAAAGTTTGTAGCATCTTCTAACTGTTCCGGAATAT
TAAATAGATTCTATACAAGCCAACCCTAGGCGAGGATAACATCTTTTAGC
GTCTTCTACACTGTCTGCACCACAAAATGTAGGTTCACCACAAAAATTAG
GGTTTTTGGTTTGACGTCCGTTGAAATTTATTCAGTGTGTGTTTGAAACC
AGAAAACTTTGGAAATGGAGGACCTATGATGAATATATCAACATATCTAA
ATTGTAATCATTGCTTTTTTTGATAGTTTTCTTGCAAAACCAGGGATTTT
TTTCCAAAATTAAAAAATAAGTTTGTCCTACAAACTGGAGCCAATTTTTA
AAAGCTTTGTCCGTCCTGAACATTGTGTCAACATTTTATGTTGGAAAAAC
AAAGAAAAACATATTTTTTGAATTTCTATTGATTCTGTATTGTATTAGGT
TTTACCACACAAAATTAACAAGAAGATTTGTTGATTCCGACAGAAGTTAG
ACGGAATAAGGCTCGCCTATATCTGTGGGTGGAGCAACTTTAAAACTGAA
AGTTCGAACTTGACTGATTTTTATCCATAATGGTTTTTAGAATTGATCAC
TATGAAAAAAATTTTTGTGACAAGTAAGTGCCATAAGACTCAATTTTGTA
TTTCCAATGATTTCTTAAGGCATCAGAAAAATGCAGAATTTATCGACATA
TTGGGGCGCCGGCAGTGTACCCGAAAATAGTTCCCATTTTGTCATAATTG
TGGTCTTACTCGACCAATTGTAGCCATGTTGTTATTTTCTCCCCATGCAG
GAAAATCAAAAACATTCTATACCAAAAGACACGTGGAATTTATTGTTGGA
TTTTTCTAATTCTGCCAACGATGATATGTCGAATTACGATGAAGAAGGTA
CTTATAGCTCTTTTTTTCTTTCAATTCCCACTTTCTTTGTCTTAATTTCA
TTGGGTAAACTTTTATGGGGATTAAATTTGTCCCTCTTTTGATTTCGGTT
TTTTTGTGGGTCATCCCTAAGCTAAAAATTTGAAATTTGACTTAATCTTA
TTTCTAAAAGGTCTAATGAGTAGATTTTCAAAGAGATGGACACTCTATTT
TCGCATTTTTTTTCAAGATCGTTTCATTTCGAGATTTGAATTCTGCAAAG
TTATACATTCCAGTATGTTTAGATTTTTCTCATTTTTTAGACGCATGGCC
TGTTTTGATCGATGATTTTGTAACATGGTCCAAACCCAGGATACAGAACA
AAAAAACAACGCTGGTTTGAAGCAGGGAAAGTTCAAAGAAATTCAAATAA
ATCTACGATCATCAAATTTTGAAGAAGATTCACACTACAGATTTTTCTCC
ATTGAAATGAGATGGGTTTGTTGTTGTCGCAGGTACCTTGAGGAATGAAA
ACTCTTCTCATAGGTTATCTTCGCACTGCAAACGCCTATAAGAGAATTCT
TATATCAAATCCGTCCTTTAAGACCATGTTCACACGTTACGGTTCCGTTT
CGCTCTAGTATGATTTTCTTTACTGATCGAGAGTGTTCATATTGGTTTCG
GAATGTTTCGGAGCAAGAAAACGAAGCAGTTCCGTTCCGATAAAAAAAGT
GGAGCAAAACCTTCTCGATCTGTTTTGCTTTGTTACGTTATCTTTTTTGA
CGTTTCGAATTTTGACGTTCACACTAGTTTCGGAATCGTTTCGTTTCGTT
TCGTTTAGTTTCGTTTCGGACCGTAACGTCTGAACATGATCTTAATCAGG
ATTACGTTTCCATCATCGTTTATGCTACCAAGTAGTCAATGTAAATAGGT
CACGTTCGAAATGAGTAAATTGTTTTGGTTATAGTAGTAGGGTAGTATAA
AAAATAACTTTTTTAAACAAAATGTATATTGTTAAAAAGAAACAATTTTT
ATACGCAATGGAAAGAGCTGTTGACTC

Coding sequence (CDS) from alignment at scaffold_486:165329..173005-

>TCONS_00068624 ID=TCONS_00068624|Name=TCONS_00068624|organism=Clytia hemisphaerica|type=CDS|length=5565bp|location=Sequence derived from alignment at scaffold_486:165329..173005- (Clytia hemisphaerica)
ACGCATGGCCTGTTTTGATCGATGATTTTGTAACATGGTCCAAACCCAGG
ATACAGAACAAAAAAACAACGCTGGTTTGAGAAAATCAAAAACATTCTAT
ACCAAAAGACACGTGGAATTTATTGTTGGATTTTTCTAATTCTGCCAACG
ATGATATGTCGAATTACGATGAAGAAGATCTAGAAATGGCGATTGCTTAT
TGGAATATTGTGTTCAAGGGTCGCTTCAAGTTTCTCGAATTATGGGTGCA
ATTTCTTACTTGTCGATAGCTTGGATGGGTTGAAAAGAAAAATGCCCAGT
GTAGAACAAGAGTTAACAGACGCTGCAAAGTTTCGTGATTTATATCAATT
CACTTTCAATTTCGCTAAAAATCCTGAACAAAAAGGATTGGACCCACATG
AAGACAAAATGCTAGCCAACGGTTTATCCAAATTCTGCGAAGACATTGAT
CTGGATCCAGCAAGTTTTGAAATCTTGTTAATCTGCTGGAAATTCAAAGC
AGCTGTTCAGTGTGAATTCACAAGGAAAGAATTTACCGATGGCATGTTAG
AATTAAGAACAAATTAAAGTCATCACAACGTGACAAGGTCCGGCAATTCA
TTTCTTTCACCAACACTGGCGAGAAGACGGCAATCTTCTGTTTGAGTTCT
CATGATTGGCGAATGGACATTGCTACGGACAATTATTTTCAACACCCAGA
ACGTTACTTCAAGGAGAATAGCAAAAGTTCCTCCTCTGATAAAAATCGAA
TCGACAAGAAAAAAATTTTACACTTGTTTGAAAAATATAAAGATGACGCA
TGGCCTGTTTTGATCGATGATTTTGTAACATGGTCCAAACCCAGGATACA
GAACAAAAAAACAACGCTGGTTTGAGAAAATCAAAAACATTCTATACCAA
AAGACACGTGGAATTTATTGTTGGATTTTTCTAATTCTGCCAACGATGAT
ATGTCGAATTACGATGAAGAAGATCTAGAAATGGCGATTGCTTATTGGAA
TATTGTGTTCAAGGGTCGCTTCAAGTTTCTCGAATTATGGGTGCAATTTC
TTACTTGTCGATAGCTTGGATGGGTTGAAAAGAAAAATGCCCAGTGTAGA
ACAAGAGTTAACAGACGCTGCAAAGTTTCGTGATTTATATCAATTCACTT
TCAATTTCGCTAAAAATCCTGAACAAAAAGGATTGGACCCACATGAAGAC
AAAATGCTAGCCAACGGTTTATCCAAATTCTGCGAAGACATTGATCTGGA
TCCAGCAAGTTTTGAAATCTTGTTAATCTGCTGGAAATTCAAAGCAGCTG
TTCAGTGTGAATTCACAAGGAAAGAATTTACCGATGGCATGTTAGAATTA
AGAACAAATTAAAGTCATCACAACGTGACAAGGTCCGGCAATTCATTTCT
TTCACCAACACTGGCGAGAAGACGGCAATCTTCTGTTTGAGTTCTCATGA
TTGGCGAATGGACATTGCTACGGACAATTATTTTCAACACCCAGAACGTT
ACTTCAAGGAGAATAGCAAAAGTTCCTCCTCTGATAAAAATCGAATCGAC
AAGAAAAAAATTTTACACTTGTTTGAAAAATATAAAGATGACGCATGGCC
TGTTTTGATCGATGATTTTGTAACATGGTCCAAACCCAGGATACAGAACA
AAAAAACAACGCTGGTTTGAGAAAATCAAAAACATTCTATACCAAAAGAC
ACGTGGAATTTATTGTTGGATTTTTCTAATTCTGCCAACGATGATATGTC
GAATTACGATGAAGAAGATCTAGAAATGGCGATTGCTTATTGGAATATTG
TGTTCAAGGGTCGCTTCAAGTTTCTCGAATTATGGGTGCAATTTCTTACT
TGTCGATAGCTTGGATGGGTTGAAAAGAAAAATGCCCAGTGTAGAACAAG
AGTTAACAGACGCTGCAAAGTTTCGTGATTTATATCAATTCACTTTCAAT
TTCGCTAAAAATCCTGAACAAAAAGGATTGGACCCACATGAAGACAAAAT
GCTAGCCAACGGTTTATCCAAATTCTGCGAAGACATTGATCTGGATCCAG
CAAGTTTTGAAATCTTGTTAATCTGCTGGAAATTCAAAGCAGCTGTTCAG
TGTGAATTCACAAGGAAAGAATTTACCGATGGCATGTTAGAATTAAGAAC
AAATTAAAGTCATCACAACGTGACAAGGTCCGGCAATTCATTTCTTTCAC
CAACACTGGCGAGAAGACGGCAATCTTCTGTTTGAGTTCTCATGATTGGC
GAATGGACATTGCTACGGACAATTATTTTCAACACCCAGAACGTTACTTC
AAGGAGAATAGCAAAAGTTCCTCCTCTGATAAAAATCGAATCGACAAGAA
AAAAATTTTACACTTGTTTGAAAAATATAAAGATGACGCATGGCCTGTTT
TGATCGATGATTTTGTAACATGGTCCAAACCCAGGATACAGAACAAAAAA
ACAACGCTGGTTTGAGAAAATCAAAAACATTCTATACCAAAAGACACGTG
GAATTTATTGTTGGATTTTTCTAATTCTGCCAACGATGATATGTCGAATT
ACGATGAAGAAGATCTAGAAATGGCGATTGCTTATTGGAATATTGTGTTC
AAGGGTCGCTTCAAGTTTCTCGAATTATGGGTGCAATTTCTTACTTGTCG
ATAGCTTGGATGGGTTGAAAAGAAAAATGCCCAGTGTAGAACAAGAGTTA
ACAGACGCTGCAAAGTTTCGTGATTTATATCAATTCACTTTCAATTTCGC
TAAAAATCCTGAACAAAAAGGATTGGACCCACATGAAGACAAAATGCTAG
CCAACGGTTTATCCAAATTCTGCGAAGACATTGATCTGGATCCAGCAAGT
TTTGAAATCTTGTTAATCTGCTGGAAATTCAAAGCAGCTGTTCAGTGTGA
ATTCACAAGGAAAGAATTTACCGATGGCATGTTAGAATTAAGAACAAATT
AAAGTCATCACAACGTGACAAGGTCCGGCAATTCATTTCTTTCACCAACA
CTGGCGAGAAGACGGCAATCTTCTGTTTGAGTTCTCATGATTGGCGAATG
GACATTGCTACGGACAATTATTTTCAACACCCAGAACGTTACTTCAAGGA
GAATAGCAAAAGTTCCTCCTCTGATAAAAATCGAATCGACAAGAAAAAAA
TTTTACACTTGTTTGAAAAATATAAAGATGACGCATGGCCTGTTTTGATC
GATGATTTTGTAACATGGTCCAAACCCAGGATACAGAACAAAAAAACAAC
GCTGGTTTGAGAAAATCAAAAACATTCTATACCAAAAGACACGTGGAATT
TATTGTTGGATTTTTCTAATTCTGCCAACGATGATATGTCGAATTACGAT
GAAGAAGATCTAGAAATGGCGATTGCTTATTGGAATATTGTGTTCAAGGG
TCGCTTCAAGTTTCTCGAATTATGGGTGCAATTTCTTACTTGTCGATAGC
TTGGATGGGTTGAAAAGAAAAATGCCCAGTGTAGAACAAGAGTTAACAGA
CGCTGCAAAGTTTCGTGATTTATATCAATTCACTTTCAATTTCGCTAAAA
ATCCTGAACAAAAAGGATTGGACCCACATGAAGACAAAATGCTAGCCAAC
GGTTTATCCAAATTCTGCGAAGACATTGATCTGGATCCAGCAAGTTTTGA
AATCTTGTTAATCTGCTGGAAATTCAAAGCAGCTGTTCAGTGTGAATTCA
CAAGGAAAGAATTTACCGATGGCATGTTAGAATTAAGAACAAATTAAAGT
CATCACAACGTGACAAGGTCCGGCAATTCATTTCTTTCACCAACACTGGC
GAGAAGACGGCAATCTTCTGTTTGAGTTCTCATGATTGGCGAATGGACAT
TGCTACGGACAATTATTTTCAACACCCAGAACGTTACTTCAAGGAGAATA
GCAAAAGTTCCTCCTCTGATAAAAATCGAATCGACAAGAAAAAAATTTTA
CACTTGTTTGAAAAATATAAAGATGACGCATGGCCTGTTTTGATCGATGA
TTTTGTAACATGGTCCAAACCCAGGATACAGAACAAAAAAACAACGCTGG
TTTGAGAAAATCAAAAACATTCTATACCAAAAGACACGTGGAATTTATTG
TTGGATTTTTCTAATTCTGCCAACGATGATATGTCGAATTACGATGAAGA
AGATCTAGAAATGGCGATTGCTTATTGGAATATTGTGTTCAAGGGTCGCT
TCAAGTTTCTCGAATTATGGGTGCAATTTCTTACTTGTCGATAGCTTGGA
TGGGTTGAAAAGAAAAATGCCCAGTGTAGAACAAGAGTTAACAGACGCTG
CAAAGTTTCGTGATTTATATCAATTCACTTTCAATTTCGCTAAAAATCCT
GAACAAAAAGGATTGGACCCACATGAAGACAAAATGCTAGCCAACGGTTT
ATCCAAATTCTGCGAAGACATTGATCTGGATCCAGCAAGTTTTGAAATCT
TGTTAATCTGCTGGAAATTCAAAGCAGCTGTTCAGTGTGAATTCACAAGG
AAAGAATTTACCGATGGCATGTTAGAATTAAGAACAAATTAAAGTCATCA
CAACGTGACAAGGTCCGGCAATTCATTTCTTTCACCAACACTGGCGAGAA
GACGGCAATCTTCTGTTTGAGTTCTCATGATTGGCGAATGGACATTGCTA
CGGACAATTATTTTCAACACCCAGAACGTTACTTCAAGGAGAATAGCAAA
AGTTCCTCCTCTGATAAAAATCGAATCGACAAGAAAAAAATTTTACACTT
GTTTGAAAAATATAAAGATGACGCATGGCCTGTTTTGATCGATGATTTTG
TAACATGGTCCAAACCCAGGATACAGAACAAAAAAACAACGCTGGTTTGA
GAAAATCAAAAACATTCTATACCAAAAGACACGTGGAATTTATTGTTGGA
TTTTTCTAATTCTGCCAACGATGATATGTCGAATTACGATGAAGAAGATC
TAGAAATGGCGATTGCTTATTGGAATATTGTGTTCAAGGGTCGCTTCAAG
TTTCTCGAATTATGGGTGCAATTTCTTACTTGTCGATAGCTTGGATGGGT
TGAAAAGAAAAATGCCCAGTGTAGAACAAGAGTTAACAGACGCTGCAAAG
TTTCGTGATTTATATCAATTCACTTTCAATTTCGCTAAAAATCCTGAACA
AAAAGGATTGGACCCACATGAAGACAAAATGCTAGCCAACGGTTTATCCA
AATTCTGCGAAGACATTGATCTGGATCCAGCAAGTTTTGAAATCTTGTTA
ATCTGCTGGAAATTCAAAGCAGCTGTTCAGTGTGAATTCACAAGGAAAGA
ATTTACCGATGGCATGTTAGAATTAAGAACAAATTAAAGTCATCACAACG
TGACAAGGTCCGGCAATTCATTTCTTTCACCAACACTGGCGAGAAGACGG
CAATCTTCTGTTTGAGTTCTCATGATTGGCGAATGGACATTGCTACGGAC
AATTATTTTCAACACCCAGAACGTTACTTCAAGGAGAATAGCAAAAGTTC
CTCCTCTGATAAAAATCGAATCGACAAGAAAAAAATTTTACACTTGTTTG
AAAAATATAAAGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042805XLOC_042805Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068624-proteinTCONS_00068624-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068624-exon-scaffold_486-1575043694:172603..173005TCONS_00068624-exon-scaffold_486-1575043694:172603..173005Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1575043694:171026..171260TCONS_00068624-exon-scaffold_486-1575043694:171026..171260Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1575043694:169200..169365TCONS_00068624-exon-scaffold_486-1575043694:169200..169365Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1575043694:168318..168448TCONS_00068624-exon-scaffold_486-1575043694:168318..168448Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1575043694:167734..167816TCONS_00068624-exon-scaffold_486-1575043694:167734..167816Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1575043694:166359..166455TCONS_00068624-exon-scaffold_486-1575043694:166359..166455Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1575043694:165329..166065TCONS_00068624-exon-scaffold_486-1575043694:165329..166065Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1510915933:172603..173005TCONS_00068624-exon-scaffold_486-1510915933:172603..173005Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1510915933:171026..171260TCONS_00068624-exon-scaffold_486-1510915933:171026..171260Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1510915933:169200..169365TCONS_00068624-exon-scaffold_486-1510915933:169200..169365Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1510915933:168318..168448TCONS_00068624-exon-scaffold_486-1510915933:168318..168448Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1510915933:167734..167816TCONS_00068624-exon-scaffold_486-1510915933:167734..167816Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1510915933:166359..166455TCONS_00068624-exon-scaffold_486-1510915933:166359..166455Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1510915933:165329..166065TCONS_00068624-exon-scaffold_486-1510915933:165329..166065Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1491911889:172603..173005TCONS_00068624-exon-scaffold_486-1491911889:172603..173005Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1491911889:171026..171260TCONS_00068624-exon-scaffold_486-1491911889:171026..171260Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1491911889:169200..169365TCONS_00068624-exon-scaffold_486-1491911889:169200..169365Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1491911889:168318..168448TCONS_00068624-exon-scaffold_486-1491911889:168318..168448Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1491911889:167734..167816TCONS_00068624-exon-scaffold_486-1491911889:167734..167816Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1491911889:166359..166455TCONS_00068624-exon-scaffold_486-1491911889:166359..166455Clytia hemisphaericaexon
TCONS_00068624-exon-scaffold_486-1491911889:165329..166065TCONS_00068624-exon-scaffold_486-1491911889:165329..166065Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:165329..173005 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
94.036	96.4824	65.8106	53.472	33.7498	27.9811	49.3323	49.8749	54.4431	45.7316	36.3375	37.7357	27.7742	25.4881	33.5349	33.8939	41.7083	43.9459	17.0549	23.1048	40.9201	36.2018	63.134	57.0828	54.2499	57.8518	36.1818	26.9541	36.085	35.5288
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005176PONY_dom
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00068624 vs. Swiss-Prot (Human)
Match: DCNL1 (DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 8.677e-110
Identity = 160/265 (60.38%), Postives = 204/265 (76.98%), Query Frame = 2 
Query:  401 MNKLKSSQRDKVRQFISFTNTGEKTAIFCLSSHDWRMDIATDNYFQHPERYFKEXXXXXXXXXXXXXXXXXLHLFEKYKDPH-EDKMLANGLSKFCEDIDLDPASFEILLICWKFKAAVQCEFTRKEFTDGMLELSVDSLDGLKRKMPSVEQELTDAAKFRDLYQFTFNFAKNPEQKGLDLEMAIAYWNIVFKGRFKFLELWVQFLTENQKHSIPKDTWNLLLDFSNSANDDMSNYDEEDAWPVLIDDFVTWSKPRIQNKKTTLV 1192
            MNKLKSSQ+DKVRQF+ FT + EKTA+ CLS +DW++D+ATDN+FQ+PE Y +E+ K S   K          L+ +YKDP  E+K+  +G+ +FC+D+ LDPAS  +L+I WKF+AA QCEF+++EF DGM EL  DS++ LK ++P +EQEL +  +F+D YQFTFNFAKNP QKGLDLEMAIAYWN+V  GRFKFL+LW +FL E+ K SIPKDTWNLLLDFS    DDMSNYDEE AWPVLIDDFV +++P+I   K+T V
Sbjct:    1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLE------QLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV 259
The following BLAST results are available for this feature:
BLAST of TCONS_00068624 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCNL18.677e-11060.38DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=... [more]
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