TCONS_00068744 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068744
Unique NameTCONS_00068744
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2345

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068744 ID=TCONS_00068744|Name=TCONS_00068744|organism=Clytia hemisphaerica|type=transcript|length=2345bp
AGAGTACGGTCCATGACAGGAAACGGATGTGAAAGGAAAGAGGAGGTCTT
CTTGTAACAATTTTAAAGTCAACGAGAACAAGAATTTCACTTTAGCTCAT
TGCCTATTGTTGCTTAAGGAACATCAATTTGGACTAAGaCCGGACTGACC
GTTTCAAAAAAAGTCCGGAGAAAAGAAATGAGTTTCCCGAGGAAAGAACC
TTCAAGCGTTATCGTCACCAAACTCAAGAAACATGCAATGCACatcgaaa
attttcttgGAAAAGGAGCTTGGGGAAATGTATACGCATGTCGTAAAAGT
TTTGGAGGGTCGAAAAAGTACGCGGCCAAGGTGGTGGAATTTGGGAATGA
CCTCGGTGTGAAATGGCAAACTGAAAACGAGATTGAGatctTGAAAGAAG
TTGGTAACCATGGTAATATCGTTGGTTTCCATGGCGTTGTCAGGGACACG
AGCAGCATTGCCATGATCTTGGAGTTTATTCCCGGGGGATCATTTTTGGA
AGGCTTACTAAATTGGCCGGGCTTCAATGAGAATGGCATGAAAATAATTG
CCAAACAATTATTGGAAGCTCTGAAATTTTGTCACTCAAATCGAATCATT
CATAGGGACGTTTGTCCTGAAAACATATTATGGTTTAATGTGCCAACCGT
TAAAAGACCTGACGTCACTCCAGTACTGAAGTTGATCGATTTCAATTTAT
CTCGAAAAGTTCCGGAAGATTCGACGTTTTTACGAGCGGACGCGCTTGGT
AACCCATCTTATATGGCTCCCGAATGCCTGTCGGATGAACCGATCGCCAC
CTTCTCTGGAGATATCTGGAGTGTTGGCGTTCTCATGTTCCTCTTACAGT
CTGGTTACCCACCCTTCTTCAACGATAATTACAATCACCTACTTAAAAAC
ATCCAAGAAGCCAACTTCGTGTTTCCACAACATCTCTGGAGTCACGTGAC
CGATGACGGGAAAGCTATCATTCAAGAAATTCTTCAACAAGAGCCAGAGA
ATCGACCGACAGCCAGTGAATTACTGACGCACCGCTGGTTCCGTACCCGA
ATCAGTACGGCAACCCCGATCATAATCAAAACCACACCGATCAACCAAGC
AGGCAGATACCTCTTTAGAACTCAAAACAACTCATCTACTCTCGAAGAAA
AGATATGGGCTGGTCAGAAAAGATTAAAAGGATTCCTCCGACATCTAAAC
GAGAAAAAGACGAGGGCGAACCATCGGAAATATTCCTTAGTTTTCAAAGA
GCGACAGGCCTTCATTCCGGAATCTCACATGATCACCATACCAACAAGCG
CGCTCATCAATGAGGTCGATTTCTATCAACAAAAAGTCGCCGCAACCGCT
TCCAAAACTCTCGAAAAATTGAACAATAGTATTGAAAGTCTAGAATTCAA
AAGACAAAGTTTTCATTGGTAGTTTGAGCCCCTTAACGTACAGAAGGATT
GTATGTAATAAAAACTAAACCCCTGTCGCAGAAAATTACGAATAACTCTG
GAATAgctttttgagacaggggtgtagacGTATTTAGCCTAGTaaagaaa
aacttaattttttagttACATGCTTCTCATAATAATCATTTAATTAGTGG
TATGTCGCACCCAGTTTTTTAAACCAAAACAGCAAAGTTAATTGTGTGTC
TAAGATGATTATTTAAAGCTGGGTGTGGCCATGCTATAGGTAATAATTTA
TAACGGAAAAATAGTAGAGTAGAAAAAAATACTTATACATTCAAAACGga
aaaaactttgtaaatattttcttgtatagagtatattatatatttttaat
ccCATGTGTATATTAGTTGTAACACCGAATTAGTTCTTGAAAATATAATA
GTTTATTTTTTGGGCTCATGTttattttgagcttttttgatTCATGTGTG
AAAGGCGAAAGACTCGTTTTTCTCGCTCTCTTACGCGAGTTACGATTACC
ATAGCTAAAGATAACATCTTTTTTGATGAATATTCAAGTTTGTTACGAAT
TGATTATCTATTTTAACTCGCAATTTCTAGTGTGTGACCCTCTCAATATT
TTGCTTTCATCTTGCGAATAGAGTGACTTGTCTGGACCGCTTTGCAATTT
TTTTAGATGTAAAAGGTTTCGAAAATAGAAAACTCTTTCCCGAGTGTCCG
AGATATACCAAGATGTCCGTTATCCGCGGAGAGCAAGAAAAGAATCGTGT
GATAGACTGAACCATCTTTAAAATtgattgatttcttttttataaatagg
ttTATAATAAGTGTATTTTGAGTGGATTAATATGATGTTTAAAATATAAT
CTTTGTAAATAACAAAATtccaaacttttattttttgaccCTACC
Run BLAST on NCBI

transcript from alignment at scaffold_49:115614..129990+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068744 ID=TCONS_00068744|Name=TCONS_00068744|organism=Clytia hemisphaerica|type=transcript|length=14377bp|location=Sequence derived from alignment at scaffold_49:115614..129990+ (Clytia hemisphaerica)
AGAGTACGGTCCATGACAGGAAACGGATGTGAAAGGAAAGAGGAGGTCTT
CTTGTAACAATTTTAAAGTCAACGAGAACAAGAATTTCACTTTAGCTCAT
TGCCTATTGTTGCTTAAGGAACATCAATTTGGACTAAGGTAACTAACTAT
ATGCTGAAAAAGGTTTTCGCAAGGAGTATTAGCccagggtccacttaaag
ctttttttatagactagatggcgcgattaagtggccctgtagtatatggt
aatatgcttttgcttaggcggactgtaaaatagtccgccagattttagtt
gtttctGGAAGGCAAAAACAAtatgaagcaatatttttatttgagaataa
gggattgcaaatctgttattgatgtttgtttctcatttttgattatatat
ttcgactccaagtagttttattgttatttagatttttaacattttctctc
gAAATGGCGACCTCACCAAACGCCCTtgtctgatattccgatggtggatt
ggcggtcgcccacgctaaagctctaaagggagcgggccaatttcccatcg
gagaggaatgatagtcgggctttgatgtgccgcatccccagtcaggttca
acagcccttgactttaaacctaaaaatatttcggttggacccgctaatcc
ccgaaaacgaggactgggttaccagacctcctgCTGCAAAATCCTTAACG
TGGTCTCGCGAAATCCCGtgatctaaaccttccagatgttgtaaattttc
ccgaccttcagtgCTTTAGCGtatgggatgaaaatttcaccatctggttG
CCAGATAGAAAACGCCCAAGCCTTCTTCACTcggcgtcataaaaaattat
caaaaagcaaagtgtAGCCAAAAGTAGACTAAAATAGTATGTGAATTTTT
CCCGTTGGCGAATTTACAGtagacgctctctaattcgattttcaagggca
TTTTCATCTaataagggagcgtattgaatagtagagcgtcaTTTATGCGA
GTGTCCTATTGACAGTGGCTTTCAATATCATCGAATAATGAAGCGTAGCG
AACAGTAGAACGTCAGTTCAACGAGCATAAAGTGCACTTTTTAACGGCTT
CAGTATCATATGTGCTCACTTTTTAAGTGAGTAGTAAAATTTTCTAGAAA
AAGTCAATGCTCATGCACTTTGAACATGTTTATAGCATTGTAGGTATTTC
ACCATGGAAGTTCTTTGTTGTACCACGAGACCTGCCCGCCTACTCGAAAT
CTTAACCAAATATACTCTTACActcaaatatttgaaaataatgaaataga
aGGCTTATTTCTCACAGTGTTTGGATTTCTGATACTCGTATATCGTATGT
TAATCGATATTCTATTTGAACTTAATTTCGCAAAGTTTATTAATCCTTGC
TGATAGGTAGTTATGCAAGCAAATAAATATGCCTCTACAGCGAGTTaata
agttgattttttttggctgaaGCTCATTTCCGATGGAAACCTGTTGAATA
TTCAAACATAATTTGAATTCATTTAAAATTAGTAGAGCCGGAGTTTTATC
GGGTTTCTATTTTTTGCTTCGGAAATCTGCAACTGGGTGGAAGGTCTTTC
ATACTAGGAAATAGCTGATTTTGCATGTTGGAggatttttcatttgtttt
tgacAAGCCATCGTTCTGTTGTCCtgttacttttattttcaaaatgtgat
TTCATGCTGATCCGAATATTTTGAAGCTTTCCTGACTCCACGAGATGATA
ACATACCAAgactttgtttttttctccacATGTTTATAAATCTTAAGGAA
GtaagaaaagaaattaattttgatagCACGGTTATGAAATTATTCAGTAT
CGTCATATTTAAAAGGTGTGTTTAAAACAGTTTTGAGGTCAACTTGCATA
ATAAGTGGTTCAGACATTTAGTGGAGTATTCAAATACTATAGTAACTTCA
GTGGGTGAATTTTTATGACCGTCAATGTCTGGTCTAATCTGCAATATTGG
GATTATAAGCGATCATGGtatgtttttcttctttcagttttcagtttttt
tctcaTTCTGGGACATGCTGATGCTGACCGCTATTTCTTTCCGCTTGAAA
CCTTATGAGATGATTCCATATGGGGTGGTTTATATCTACATAAAATATCG
AGATCATCGACATTTGATCATAAGAATCTCAAATAGTCAAGAATTGTAAG
CGTTGAAGTTAAGCGTAATGTGTCCAGGGTTAAAATGATGTCAGTGTCGG
GATGTCGAGATAAATATTCGTTTTTTCATAGTTACAATAAACCTTTATTT
TTGCCGCTTTAATTTACCATTTTACTTTTCCATATTCAAATAATACTCTC
AATTATTTTTTGTTGCAAAATTTGCTTTTCCCAAAAGCCTTAGTGTGATT
ATCTCTAAATAATTTACTCCGATCTTTTTTTTGCgaaataatttttcctt
tttgagAGGAGATTGTTCgttgaaagaaattttgctgTTATGTCTCTCGT
CTGGTAAACTTTTGCGGTGTGTAGAGTGTAAGCATCTATACCAGTTGAAT
ATATTTTAACAAATATGGCAAATCAAGAACTGTGTTTaagttttcgtttt
ttaattCCATTCGTAATCTTATCTCATAGGCGAGTTAACTTATCGACGGA
ATCCATTACAAATCAAAACCGCTTATCCTACATAAAGTGATCAAATGTTT
TAGTTTCTACGCCCATGAAAAGCTCTTTTTGGTGAATAGATTTATATAGT
CATTTTTgctatttcatatttttgatctcatttctttgaaaagttcgtga
atttttgaaatcctttaaaatttgatatttatattAACACTGCAATTTGT
GCATCTGAGCTTTATAAAGGTCATTTCTTTCTGCAAACGAAATTTTCTAC
CTTGTACGTTACCTTTGATCGCATCGTCGAGTGGTATAAAATCGATAGTT
GCCTTGTTTTATGAAATGTATAAGTCACTACTCCCCGAGTCGGGATtggg
taattttcgcgcctgctgccttccttagatgtggtagccGTTTCTCAGAC
CCTCTCTCTGGAAAGAATTCGGTTTAAGCAGGTAATCGGttgacattgaa
aaaaattcatcttAGAAGGCTTCGTCGCAAAAAGCAATTTCTTGAGAAGG
ACATACAAATTAATTATGACTGATTGGATTACATTAAATATGCCCGCTAT
TTCACTTAAACGTGCTTATCCTCTTTGTGAACCGAAAATGCCGACTTTCA
TCCCTAGTCCTTTTTTAGAACATATCAAAAGCCGGGTAAAAATTGGATTT
AAGTCTATTTCTAGCTGGGGTTTCAGCCCCAAAGATTGAGTGCTACCCTT
ATATATATAAGGTCATTTTAGGAGGGAAGACACTCTTCCCCGTTTCTGTT
TTCCTCTAACTAGGCCTATATTGGATTACTTCTACTTCGCATATAAGATA
AATAAAACGGAGAAATTTAAGATGGTATGAAATATCAAATTCGAACCAGG
GTGCTATTCTCTTTCGGATTCATCACttctcaaaaaaaagtcaattaGGA
TTTAATAAGTGGATAGTACGAACTATGGGATaaacaaaaaaggttaagaa
atttCTCGGTGCTATGTTAAAATGCCTGGATGTCAAAGAAAAGGTTTTTG
AGGATATTGAGTCAAGTGGACGCGGACATAAATTTATTGCTTTATTGCAG
TGCGGTCTGTGTTCGTACGGATGAGCGGAACTTTGAGGTATGTGTCACTA
TATCTGAATCACCCACTAATCAATGTTGGCAGCCCGTGTTTTAAAGTTTA
TATTGTGTTGCAACAACGATCTGGGAAGAGTTGGACTGAGTATTAACGAA
CAGGAAATTGTGAAATTGAAGAATCGCCTCAATTTGCACACGTCACGTGT
GATGGTTTGACGTGTTCTgcgtttgatgacgtcagcagattCGTTTTTAT
TTAATAGCGTATGTTTGGCATAACTAGCCCTAGATTTTAAACTCTCGTTC
AGTTTGTTGTTTTGGATTTCTTCTTCTGGTTTGCATAACTTCAAACCGAA
AGAAGAACTTATTTTTTCGTTGGGTTTCCCGACTTCTAAGCGGTGTCATT
GAGACTAATGCGTCGATCTTATAATGAAAACAAGAAATTCAATCGAAATT
GAATATGCATGTCGATTCCCGTAGTGCGGGCGCGCCATCAATATTTATTT
TCCTCCAAAAACATTTGCTTCTGAAATATGCATGAAGAAATTGAATCCGT
TTGAATTGGGTTTTTGAATAATCGGGGAATGATTGCTCATTCGATACTGA
ATATCTATTGCTCTCTTATCAAATGGCGTTAGAGAAAATCTTGGTGTGAA
TTTAAGTTGTATTAGAATGTCACCTCAAAACTGGCTAAGAAAATCACTTC
GTGCTAGTTAGAGAAAACTTTGGTGTGAATTTAAGTTGTATTTGAGTGTC
ACCTCAAAACTGGCTAAGAAAATTACTTCGTgctaatttgaatatttttt
gatgttacttaatctttcttttttattatagaCCGGACTGACCGTTTCAA
AAAAAGTCCGGAGAAAAGAAATGAGTTTCCCGAGGAAAGAACCTTCAAGC
GTTATCGTCACCAAACTCAAGAAACATGCAATGCACatcgaaaattttct
tggtAAGATTATTTTCTCCTTGACCCTGTCTCGAAGTAATGATTTTGTAC
AGTTTCTGTAGTACTATGTATTCGAGTATAGGAGTGATTCGAAAGTTGCG
TAAAACATCAGAATTTATGAGcaatagattttaaaattttattgcaGTGT
TTtgcatttttgcaattttaatcTCAAAGAATAGTTTTGAGGATAGGTCA
CTCATAATGACCGTTACTTGCaactattttacaaatctaaaATCCAAACT
GGATTAATTTTCTTTAAGCCGTGAGATTAGATCGGTTCCCGACTGAATAA
TGCATAGTTAACGGCCGATCAGTCTATTCTTTAATTCACAGAAAGTTTTT
AGTTAATCGCCTGAAGGCTCGGCTGACGTCAATAGGATATATATTTAGAA
GAGTTTAGTTTTCAAAACCCATGCATGCCGGTTCACGCAGTGTTTGGAAT
CCCTGTTAAGTTCGTTACATTTGAACTTGCTTTAATTAACCCCTCACAGT
TACTGATGGACTTTGAAATTTATACCCACAGATATTATATAACTGCTCTT
AGATTTCCCGTGGAAGTGTATCCAGTTTTGAAGTCGATTAGTCCGGCATG
TTGTTTACCAATTTATCTTAGGTTTTCGAACCTTTGAATTTCAAAGCATT
CGAATCGTGCTGTTGACgaacaaaattgaaaacaagatgacATAGACTAG
TCAGCTCTAAATTTGGACACGCTTCCTATATACGGATAGCCCTATCCAGT
CAAATAGTTAAGATCAGTGTTTATACTTTATTGGTACTAAAAGCTATGGT
GTTTCATGATATTGTGTAACTTAAAACAAATGCGTAACATTGAGTTTTgt
taagtaaaaagtaaaaacttagcattataaaattataaaagcTAGGTCAT
TTGGATTTTACATTGTTTAACTTTAAGTACATTTGTGTACATTCGCGATT
TGCGATATTGAATTTTTAGTTCAACCAAATTGTTAAACTAAGGGACTGAA
GCATCCATACTAAATCCTTGTTGGTATGGCGCAAATCTACTGGAATAAAA
AATCATCTTTCCACAAATTGCTTTAAAATTTGCTACGCTACTATCGCCTA
CTTTTTACCAAAAAGTCAATTTCCGATTTAAAGATCGTGGTATATGTTAA
TCTTAAAGCACTTAGAGACGTGACTTAGCCAATTCTAAATAATTGATTTC
AAAGACTCAAAGGAGAAGGAAAAATTCTGGGATGCTACGGATAAGAGTGA
AGGAAAAAGGGTAATAATCCTGAGGCATTTTGATTTCTTAATCAACAAAC
AGACGATAAGCTCTAATTGTAATGGCCTGCTCATTAAGAAGCATGATTAT
TTTTGTAGATTAGCTTCCCGCTGAGATGATTTATCTTAAAGTCTCAAACC
TTCGAATGCGTTCAGCCTATTTCATTTTTGCAAACATCGGGGGCTCATAA
ACATAGATTAAGGTTTTCAAAAGAAAGGGGAGGAGATGTAAGTCTGGGAA
TTACGTGTTGCAAAATAAGCGTTGGAcgtttttaaggcttgaaaGCTTAG
TAAGAAGCGTTGAACGTCTCTAGGGGTTCAAAGCTTAATCAAGAAGAGTT
GGCCGTCTTTCGCACCAGTTCTAATGATGGATTAAATATTTTGGCTGTCA
GCCGTTGGCAGATGACCAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTTCTGTAGTACTATGTATTCGAGTGTAGGAGTG
ATTCGAAAGTTGCGTAAAACATCAGAATTTATGAGcaatagattttaaaa
ttttattgcaGTGTTTtgcatttttgcaattttaatcTCAAAGAATAGTT
TTGAGGATAGGTCACTCATAATGACCGTTACTTGCaactattttacaaat
ctaaaATCCAAACTGGATTAATTTTCTTTAAGCCGTGAGATTAGATCGGT
TCCCGACTGAATAATGCATAGTTAACGGCCGATCAGTCTATTCTTTAATT
CACAGAAAGTTTTTAGTTAATCGCCTGAAGGCTCGGCTGACGTCAATAGG
ATATATATTTAGAAGAGTTTAGTTTTCAAAACCCATGCATGCCGGTTCAC
GCAGTGTTTGGAATCCCTGTTAAGTTCGTTACATTTGAACTTGCTTTAAT
TAACCCCTCACAGTTACTGATGGACTTTGAAATTTATACCCACAGATATT
ATATAACTGCTCTTAGATTTCCCGTGGAAGTGTATCCAGTTTTGAAGTCG
ATTAGTCCGGCATGTTGTTTACCAATTTATCTTAGGTTTTCGAACCTTTG
AATTTCAAAGCATTCGAATCGTGCTGTTGACgaacaaaattgaaaacaag
atgacATAGACTAGTCAGCTCTAAATTTGGACACGCTTCCTATATACGGA
TAGCCCTATCCAGTCAAATAGTTAAGATCAGTGTTTATACTTTATTGGTA
CTAAAAGCTATGGTGTTTCATGATATTGTGTAACTTAAAACAAATGCGTA
ACATTGAGTTTTgttaagtaaaaagtaaaaacttagcattataaaattat
aaaagcTAGGTCATTTGGATTTTACATTGTTTAACTTTAAGTACATTTGT
GTACATTCGCGATTTGCGATATTGAATTTTTAGTTCAACCAAATTGTTAA
ACTAAGGGACTGAAGCATCCATACTAAATCCTTGTTGGTATGGCGCAAAT
CTACTGGAATAAAAAATCATCTTTCCACAAATTGCTTTAAAATTTGCTAC
GCTACTATCGCCTACTTTTTACCAAAAAGTCAATTTCCGATTTAAAGATC
GTGGTATATGTTAATCTTAAAGCACTTAGAGACGTGACTTAGCCAATTCT
AAATAATTGATTTCAAAGACTCAAAGGAGAAGGAAAAATTCTGGGATGCT
ACGGATAAGAGTGAAGGAAAAAGGGTAATAATCCTGAGGCATTTTGATTT
CTTAATCAACAAACAGACGATAAGCTCTAATTGTAATGGCCTGCTCATTA
AGAAGCATGATTATTTTTGTAGATTAGCTTCCCGCTGAGATGATTTATCT
TAAAGTCTCAAACCTTCGAATGCATTCAGCCTATTTCATTTTTGCAAACA
TCGGGGGCTCATAAACATAGATTAAGGTTTTCAAAAGAAAGGGGAGGAGA
TGAAAGTCTGGGAATTACGTGTTGCAAAATAAGCGTTGGAcgtttttaag
gcttgaaaGTTCAATTAAGAAGCGTTGGACGTCTCTAGGGGTTCAAAGCT
TAATCAAGAAGAGTTGGCCGTCTTTCGCACCAGTTCTAATGATGGATTAA
ATCTTTTGGCTGTCAGCCATTGGCAGATGACCAATAACGTCAGATATTCC
TTGGTAAACTGTATACGATGACCTCAACAAGGAACCCTAAAATAGACATC
AGCACGTATTATCCTTTGGAAGTAAAGCTTTAGAATGTCGATGCAgagat
ttcattgaaaatggaACACTCTCCTGTTGACAACGGCATCAGCAAGTTTA
TCTGCTCTGTACTAGAAAATGATTGTTTAGGGAACCTCAATACCAATGAC
CTCAACAAGGAACCCTAAAATAGACAGGACAACCCTATTATGTTAAATTT
AGCTGTGCATCAGACATCCGTAGcatcaattttcttttcacCTTAAAgaa
gaaatgttttcttttttcgttGCCTTCCCCATTTTTCCAGAGCAGATTTC
AGCAACATCCAATCTTCTTGCTGCAGAATAGTGACGATAGGTGTACAAAA
ATTGCTAGAGGAAAATTCTTTACCCTTGAGGAAAGTTAGAAAATCATCAA
TTGAAACCAGAGGGATTACTATCTAGAAATTGAGGCCGacattgattttg
ttttatttaccATACAGAAAATTATTTGTAGTCAGGGGAAGATCATTGTT
TTCACAAAGTGCTTACGTCACATGTCGACAACCATCTCAGGAAAGTTAGA
TAAGAGATTTGGGAGATGATACCATGCCTAATAAGCCATTAGAATTATGG
GATAAGCATACTATGGTATGCGGTGTCGAGGTTCCCTAAGCAATCATTTT
CTAGTACAGAGTAGATAAACTTGCCGATGCCGTTGTCAACAGGAGAGTGC
tccattttcaatgaaatctcTGCAtcgacattttaaagctttactTCCAA
AGGATAATATGTGGTGATGTCTCCTTTGCCTATCACAAAACTGCGAAACC
TTATCATAACGGCTGGTTAATACGTCATCAATTAAATGATAAACTTTGAT
TAAATTAGGGTTCGATCTTATCCTTGATTCGTCTATACTACTCGTGCTGT
GTACCCTCTTCTTACTTaaagtaaaaattcaaaacttcgaataaatttta
aaactttctaaGACTTATTACAAAACTTTACCACAGTCACAAAAGGATTT
GAATTATGCTTGcaacatcaataaattacaaagatttttctttgaaagaa
aatgtcggCTGATTATTCATCAAGAAAGTAAACCGTTAGATCCTTATCTA
AAGGGATGCCATCACACAAGATTTGAGGGCTTGATAAGAGAAGAAACAAC
GATGACTTGGAAATTCAAATGCAAAGAACTTAACGTGAAGTTTTATGGGG
AAACTAATCACTTCACGGTAACTCGAGATAAGATTTGACAGGGTTTTAAT
AAAGTAGAACTCCCAGACAACCCAATACTGAGTTCTAGTTTCAAATAGAA
GTAACTGTGCTAACTATGAATATTTCGCTGTTCGGGAAATTGAAATTCAC
AGCTCCTGCTGGTTCTTTACGTCATAAGTCGATTTTGCTTTCCAATAAAT
TCCCTTTGCTTTCACCCGAGTGTAATGACCTGTATCACATTTTCGGGAGA
GTGCAATTGAGCTATTTCAGAAAAATGTTATACCCCCTTTTTTGAGGAGG
TCGTTTTGGGAAAGGTGACCccttagattttttttcaatttttcggtaCC
CCCTTGGCCAAtcctggatttttacactcaaAAAACTAGACCCATCCGTT
AGATATTTAATTTTCCAGACCACCTTGGGCGTCACATCTCCTCAACTTAG
GGGTTACAGACTATTTATCGGCTAACTTTTATCCACTAAAGATTCTCAGC
TCTACAGCTCTAAATTGCCGCCTTTTCTAAGgttgtttttaaaagaatcg
AACACTNATTTATCGGCTAACTTTTATCCACTAAAGATTCTCAGCTCTAC
AGCTCTAAATTGCCGCCTTTTTTAAGGTTCTTTTTAAAAGAATCGAACAC
GAAACACGAAAGTTACTTATCACTATATTGTAGAGTTAAGTACCGTAAGT
TCATTGAGTCCATTGTCTGAATACCAGCCTAAAAGCGTTGTGAAAGCACC
ATTGgaagaaaaaagtaaatttagcTAGCGCTAGTTTCACAGCTTGTAAA
AAGTACCCACTGTTTAGGTTGGAACCTTCGCtgactttctttcttttttt
tctttgactATTCCCTTGATCTCCTATGGCCGCTAAACTTCACGGTAACG
CGATTCTGTTATTCTGTTAAAAACCTCCATTCATTTCATTCTCAAACGTG
TAGAAATGAAATAGAAAATCTCTGCATGCTGATTGGGGGCCAATAAACAA
TCGCCATCAAACTCAGCGgatcaataaaaagaaatcgGGAGGTTGTAAGA
TGTCAGCTTAAAAAGACATCAAAAACTtctgaaacttttttcataagaac
gtGTTCTACTATtcgctaaaatataaaaacaagcTTGGCACAAAATCTGG
TAATCGTACCAAGATTATTATTTTCAATCCCAACTCTAAATCCCCATATA
TTTTCTTTGAACACGTTTTCGGATTAATTCAGCGTCATTTTACTGATGAA
AGAATccctttttaggtttttatatATTCTTACAATAAATAAGAAATCGT
CATCTAGATAAAGATCTGTATTGTTATGCGAATGAGAATTAATTTCAGGA
AAATAGGTTGATATAACAGAGAGTAGTTCAGAAGGTTAGCCAGTTATTTA
ATCGAAGTTCAGCCTCTCACATCTCAAAGGAacaaagttttatataattt
gactgGTACTATCTGCGTGAAGAAGATGAGAGAAAatctaaaaggatttt
caaatttcgatCCCATCTTAGGAAAAGGAGCTTGGGGAAATGTATACGCA
TGTCGTAAAAGTTTTGGAGGGTCGAAAAAGTACGCGGCCAAGGTGGTGGA
ATTTGGGAATGACCTCGGTGTGAAATGGCAAACTGAAAACGAGATTGAGG
TGAGTACAAAATTAAATAcattgaattttattatttttcctgtttttttc
tAGATTCAAAACTCACTATTTGAGCTCGTAGGTTTTGTAAGTGGTTTTAA
ATCggattccccccccccccaaacccTTGTCCAATTtcgataaaaattat
ttttttcttttttttttttaaattaaaaacccCCTATTTGAGCTCGTAGG
TTTTGTAAGTGGTTTTAAATCggattccccccccccccacacacATTGTA
CAAATTCAgtcaaaatgatatttttcaattgtaatcaacattttctgttt
ttgcctacggtatgctctctctctctctgaaAGCGGATTAAAATATTGAT
GATAGTTTTTTCATGCCTGACCTGAGGTAACTTTAGgttgtttttgattt
tcttttcaactaAAGGTAAAGAtgtatttttaagttttataaACCGCAAA
AGATATTTTCCATCCCTAAGCCTCGAAACTTATATAAAATGCCAAAAATT
TCGAAACGTTTCTTTTCTTACCTATGTTTTCCCTTTGATACAAATTAttc
gtatttttctttttcagatctTGAAAGAAGTTGGTAACCATGGTAATATC
GTTGGTTTCCATGGCGTTGTCAGGGACACGAGCAGCATTGCCATGATCTT
GGAGTTTATTCCCGGGGGATCATTTTTGGAAGGCTTACTAAATTGGCCGG
GCTTCAATGAGAATGGCATGAAAATAATTGCCAAACAATTATTGGAAGCT
CTGAAATTTTGTCACTCAAATCGAATCATTCATAGGGTATGTACACttct
attgttttaactttgagTTTGTCCATGCCCGTATCTACCACGCATTGCGT
ATTATTTTCGACATGTACTTGCGGTTTTTCATTTCCTATAAGGTTTATAT
AAGTTacatttgatttaattttggtTTGATATCAGCCTCTacaatcaacc
aaaattaaattttgaacaaGACGTCATTTTGTATACTGACTTTAAACATG
TGTTTTTTTTGTGTAGGACGTTTGTCCTGAAAACATATTATGGTTTAATG
TGCCAACCGTTAAAAGACCTGACGTCACTCCAGTACTGAAGTTGATCGAT
TTCAATTTATCTCGAAAAGTTCCGGAAGATTCGACGTTTTTACGAGCGGA
CGCGCTTGGTAACCCATCTTATATGGCTCCCGAATGCCTGTCGGATGAAC
CGATCGCCACCTTCTCTGGAGATATCTGGAGTGTTGGCGTTCTCATGTTC
CTCTTACAGGTGAGTGTTGGTTCTTCACATTCTTCTCACGAACCTCTCTA
CAAAAGATAGTCGATTCTCATTCATTAGAATTTGCCATATATTACCGTCA
ATGTgggatttcaaaatattgaattcTAATTCCTAACTCCTTTaagagaa
aattattattttttataatcGTCTGCTATCTTTTCTCCTTCAGTCTGGTT
ACCCACCCTTCTTCAACGATAATTACAATCACCTACTTAAAAACATCCAA
GAAGCCAACTTCGTGTTTCCACAACATCTCTGGAGTCACGTGACCGATGA
CGGGAAAGCTATCATTCAAGAAATTGTaagattttgagaatttttagtTA
TATATGGGAAAGACACTTCTTTATCTTCAAACTTTGCACTCATTTTGGAA
AGGTTACTTTGATGTTATAACCAGCGATAAAATCCgcttcagaaaaaaaa
ctttcattttattttcttcaGCTTCAACAAGAGCCAGAGAATCGACCGAC
AGCCAGTGAATTACTGACGCACCGCTGGTTCCGTACCCGAATCAGTACGG
CAACCCCGATCATAATCAAAACCACACCGATCAACCAAGCAGGCAGATAC
CTCTTTAGAACTCAAAACAACTCATCTACTCTCGAAGAAAAGATATGGGC
TGGTCAGAAAAGATTAAAAGGATTCCTCCGACATCTAAACGAGAAAAAGA
CGAGGTAATTTATGTCGAATTATGCAATTAAAGAAGTATTAAATCTCATA
TCTAGTCTGCATGTTTTTCTCAATCATCATTGGTTTAAAATGCTTGAtat
cttaaaaattgaaatttttttatgaaacatCATTCTTTTCTTTCAGGGCG
AACCATCGGAAATATTCCTTAGTTTTCAAAGAGCGACAGGCCTTCATTCC
GGAATCTCACATGATCACCATACCAACAAGCGCGCTCATCAATGAGGTCG
ATTTCTATCAACAAAAAGTCGCCGCAACCGCTTCCAAAACTCTCGAAAAA
TTGAACAATAGTATTGAAAGTCTAGAATTCAAAAGACAAAGTTTTCATTG
GTAGTTTGAGCCCCTTAACGTACAGAAGGATTGTATGTAATAAAAACTAA
ACCCCTGTCGCAGAAAATTACGAATAACTCTGGAATAgctttttgagaca
ggggtgtagacGTATTTAGCCTAGTaaagaaaaacttaattttttagttA
CATGCTTCTCATAATAATCATTTAATTAGTGGTATGTCGCACCCAGTTTT
TTAAACCAAAACAGCAAAGTTAATTGTGTGTCTAAGATGATTATTTAAAG
CTGGGTGTGGCCATGCTATAGGTAATAATTTATAACGGAAAAATAGTAGA
GTAGAAAAAAATACTTATACATTCAAAACGgaaaaaactttgtaaatatt
ttcttgtatagagtatattatatatttttaatccCATGTGTATATTAGTT
GTAACACCGAATTAGTTCTTGAAAATATAATAGTTTATTTTTTGGGCTCA
TGTttattttgagcttttttgatTCATGTGTGAAAGGCGAAAGACTCGTT
TTTCTCGCTCTCTTACGCGAGTTACGATTACCATAGCTAAAGATAACATC
TTTTTTGATGAATATTCAAGTTTGTTACGAATTGATTATCTATTTTAACT
CGCAATTTCTAGTGTGTGACCCTCTCAATATTTTGCTTTCATCTTGCGAA
TAGAGTGACTTGTCTGGACCGCTTTGCAATTTTTTTAGATGTAAAAGGTT
TCGAAAATAGAAAACTCTTTCCCGAGTGTCCGAGATATACCAAGATGTCC
GTTATCCGCGGAGAGCAAGAAAAGAATCGTGTGATAGACTGAACCATCTT
TAAAATtgattgatttcttttttataaataggttTATAATAAGTGTATTT
TGAGTGGATTAATATGATGTTTAAAATATAATCTTTGTAAATAACAAAAT
tccaaacttttattttttgaccCTACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042878XLOC_042878Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068744-exon-scaffold_49-1491911889:115614..115751TCONS_00068744-exon-scaffold_49-1491911889:115614..115751Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1510915933:115614..115751TCONS_00068744-exon-scaffold_49-1510915933:115614..115751Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1575043694:115614..115751TCONS_00068744-exon-scaffold_49-1575043694:115614..115751Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1491911889:120145..120265TCONS_00068744-exon-scaffold_49-1491911889:120145..120265Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1510915933:120145..120265TCONS_00068744-exon-scaffold_49-1510915933:120145..120265Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1575043694:120145..120265TCONS_00068744-exon-scaffold_49-1575043694:120145..120265Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1491911889:126635..126762TCONS_00068744-exon-scaffold_49-1491911889:126635..126762Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1510915933:126635..126762TCONS_00068744-exon-scaffold_49-1510915933:126635..126762Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1575043694:126635..126762TCONS_00068744-exon-scaffold_49-1575043694:126635..126762Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1491911889:127331..127549TCONS_00068744-exon-scaffold_49-1491911889:127331..127549Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1510915933:127331..127549TCONS_00068744-exon-scaffold_49-1510915933:127331..127549Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1575043694:127331..127549TCONS_00068744-exon-scaffold_49-1575043694:127331..127549Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1491911889:127780..128022TCONS_00068744-exon-scaffold_49-1491911889:127780..128022Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1510915933:127780..128022TCONS_00068744-exon-scaffold_49-1510915933:127780..128022Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1575043694:127780..128022TCONS_00068744-exon-scaffold_49-1575043694:127780..128022Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1491911889:128207..128338TCONS_00068744-exon-scaffold_49-1491911889:128207..128338Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1510915933:128207..128338TCONS_00068744-exon-scaffold_49-1510915933:128207..128338Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1575043694:128207..128338TCONS_00068744-exon-scaffold_49-1575043694:128207..128338Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1491911889:128485..128717TCONS_00068744-exon-scaffold_49-1491911889:128485..128717Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1510915933:128485..128717TCONS_00068744-exon-scaffold_49-1510915933:128485..128717Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1575043694:128485..128717TCONS_00068744-exon-scaffold_49-1575043694:128485..128717Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1491911889:128860..129990TCONS_00068744-exon-scaffold_49-1491911889:128860..129990Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1510915933:128860..129990TCONS_00068744-exon-scaffold_49-1510915933:128860..129990Clytia hemisphaericaexon
TCONS_00068744-exon-scaffold_49-1575043694:128860..129990TCONS_00068744-exon-scaffold_49-1575043694:128860..129990Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:115614..129990 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.195341	0	15.2377	13.9778	26.6915	42.2599	20.1715	20.8938	13.3076	14.3113	5.95794	5.27313	4.61295	5.83157	6.38429	4.78834	5.19016	4.3609	9.8766	9.13983	1.67094	2.63741	6.45325	4.75783	0	0	0	0.524839
Blast
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BLAST of TCONS_00068744 vs. Swiss-Prot (Human)
Match: DAPK3 (Death-associated protein kinase 3 OS=Homo sapiens GN=DAPK3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.231e-40
Identity = 86/271 (31.73%), Postives = 143/271 (52.77%), Query Frame = 1 
Query:  256 LGKGAWGNVYACRKSFGGSKKYAAKVVE----FGNDLGV-KWQTENEIEILKEVGNHGNIVGFHGVVRDTSSIAMILEFIPGGSFLEGLLNWPGFNENGMKIIAKQLLEALKFCHSNRIIHRDVCPENILWF--NVPTVKRPDVTPVLKLIDFNLSRKVPEDSTFLRADALGNPSYMAPECLSDEPIATFSGDIWSVGVLMFLLQSGYPPFFNDNYNHLLKNIQEANFVFPQHLWSHVTDDGKAIIQEILQQEPENRPTASELLTHRWFRT 1047
            LG G +  V  CR+  G  K+YAAK ++      +  GV + + E E+ IL+E+  H NI+  H +  + + + +ILE + GG   + L       E+      KQ+L+ + + HS RI H D+ PENI+    NVP        P +KLIDF ++ K+   + F   +  G P ++APE ++ EP+     D+WS+GV+ ++L SG  PF  +     L NI   N+ F +  +S+ ++  K  I+ +L ++P+ R T ++ L H W + 
Sbjct:   19 LGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN-------PRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 277
The following BLAST results are available for this feature:
BLAST of TCONS_00068744 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPK34.231e-4031.73Death-associated protein kinase 3 OS=Homo sapiens ... [more]
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