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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068952 ID=TCONS_00068952|Name=TCONS_00068952|organism=Clytia hemisphaerica|type=transcript|length=937bp
GTGATTGGCGCAAGACAACGGGAAGAAACATTCTCCAAACAAAACCACAT
CATCAGTGAGAAGTATGACTGTCATGCCAAAATATTGCAGTCCCTATCTG
TTGGAACCAACGTCGTCATCAAAACAGTAGTAAGAAACATCAACGTCAAT
GGATTTGCTCTGGGGTGATCGTAGAAACACTCCCTAACAGACAATACAGA
GTCAGAAGCAATGGCTCAGAGAGGGTGACACTGCAAAATCGTCGCTTCCT
TCGACCAGCAACATTTCTATCACCAACAGTACTACCCACACAAACCAATC
TGCTTCCATCCAGCTTCACCATCAACCTCACCATTCATTAGAGACTACTA
CCCCTTTAACCACTCCTCATCCAACAACTCCTATGCCTGCTCTTCCTCGG
CCTCAACACAAGTAACAGATTCCCAATTTTCGTCTTTCTTTTCCAGTTTG
TTTTTCTCATTCTGCTATTAAACTATTGATACTGTTGCTCGAGTTTGAGA
ATGTCTGAAGACTTGTTAGGTCTTCAGTATTtggctctaaagctctaaaa
agaGCACCTAGTAACATGAAAACCTGTAGGGATGTAGGATCTTNAAACTA
TTGATACTGTTGCTCCAGTTTGAGAATGTCTGAAGACTTGTTAGGTCTTC
ATTATTtggctctaaagctctaaaaagaGCACCTAGTAACATGAAAACCT
GTAGGGATGTAGGGATCTTCAagagaaatcaaaacaataaagtgCACTCA
CAAAGATCGATTTGTCAGATGGCACAAATTTAATatcggcactgtcatca
tttgaCAATTCAACAAAAGAACTATGTCAAGAATCTTGTATATAAACATT
CAAACAACCATCCGAAATGATCTGCCGTATGAACTTCtactattttgaga
aaaaaacatgCACAGATTGGGGTCTAGGTCAAGTGAA Run BLAST on NCBI transcript from alignment at scaffold_490:51188..52124 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068952 ID=TCONS_00068952|Name=TCONS_00068952|organism=Clytia hemisphaerica|type=transcript|length=937bp|location=Sequence derived from alignment at scaffold_490:51188..52124 (Clytia hemisphaerica)
TTCACTTGACCTAGACCCCAATCTGTGcatgtttttttctcaaaatagta
GAAGTTCATACGGCAGATCATTTCGGATGGTTGTTTGAATGTTTATATAC
AAGATTCTTGACATAGTTCTTTTGTTGAATTGtcaaatgatgacagtgcc
gatATTAAATTTGTGCCATCTGACAAATCGATCTTTGTGAGTGcacttta
ttgttttgatttctctTGAAGATCCCTACATCCCTACAGGTTTTCATGTT
ACTAGGTGCtctttttagagctttagagccaAATAATGAAGACCTAACAA
GTCTTCAGACATTCTCAAACTGGAGCAACAGTATCAATAGTTTNAAGATC
CTACATCCCTACAGGTTTTCATGTTACTAGGTGCtctttttagagcttta
gagccaAATACTGAAGACCTAACAAGTCTTCAGACATTCTCAAACTCGAG
CAACAGTATCAATAGTTTAATAGCAGAATGAGAAAAACAAACTGGAAAAG
AAAGACGAAAATTGGGAATCTGTTACTTGTGTTGAGGCCGAGGAAGAGCA
GGCATAGGAGTTGTTGGATGAGGAGTGGTTAAAGGGGTAGTAGTCTCTAA
TGAATGGTGAGGTTGATGGTGAAGCTGGATGGAAGCAGATTGGTTTGTGT
GGGTAGTACTGTTGGTGATAGAAATGTTGCTGGTCGAAGGAAGCGACGAT
TTTGCAGTGTCACCCTCTCTGAGCCATTGCTTCTGACTCTGTATTGTCTG
TTAGGGAGTGTTTCTACGATCACCCCAGAGCAAATCCATTGACGTTGATG
TTTCTTACTACTGTTTTGATGACGACGTTGGTTCCAACAGATAGGGACTG
CAATATTTTGGCATGACAGTCATACTTCTCACTGATGATGTGGTTTTGTT
TGGAGAATGTTTCTTCCCGTTGTCTTGCGCCAATCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068952-exon-scaffold_490-1491911889:51188..52124 | TCONS_00068952-exon-scaffold_490-1491911889:51188..52124 | Clytia hemisphaerica | exon |
| TCONS_00068952-exon-scaffold_490-1510915933:51188..52124 | TCONS_00068952-exon-scaffold_490-1510915933:51188..52124 | Clytia hemisphaerica | exon |
| TCONS_00068952-exon-scaffold_490-1575043694:51188..52124 | TCONS_00068952-exon-scaffold_490-1575043694:51188..52124 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_490 | supercontig | scaffold_490:51188..52124 . |
Blast
The following BLAST results are available for this feature:
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