TCONS_00068973 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068973
Unique NameTCONS_00068973
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1126

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068973 ID=TCONS_00068973|Name=TCONS_00068973|organism=Clytia hemisphaerica|type=transcript|length=1126bp
gttttttttcatgttttggaATGAATCTTGAGTACTTACTTTGTATAGAT
ATTGATTGAGTAGCTACGATGATGCAAATTCAATAAATTCTTAAGTCTTG
TTTATTGAAATGACTCGATTACTTTTGAAGTTGACCATCGTCTTACTTGC
ATTTGAAACGGtTTCGCTGTCGTTAAAGAAAGGCATAGTAATACCTGGTA
tCACAGCATGCGGTTCGGCTGAGCTACATAACAAATATAGACGTTTTCAC
AAATCAACGCCGGACGTTGATGGAAGCAACGAGTTGGTCAAACTCTCTCA
ACAATGTGCAAGTCAAATTATTCAAACTGGAAAAAGCACGTGTGACCATG
AGGATTCTTATGGAATCAATATTGCAATACTTCCCTCTGTTTCTCGGACT
TCACACTTAGAAGAACTTATGGCAGCATGGTATTCCGAATTGGATTCAAT
CAAATTTAACAGTAAAGGTTACGAAAATTTACATTACAACGCTTCTACCA
TTGCAAACGCTACTCAGATTATTTGGCGATCCACCCAAAAGGTTGGGTGC
TCGGGCGTGACACACCCAGGGCGTCATCAATCATCAgtttatgtttgttt
ttattcacCACGTggcaattattttgataaaccGACTGATATCATACTCA
ACCTCAAACCGAGAATCACACCCATTGAAGCCAAAACTAAATTCGAGGAA
TGCAAGGACGACTACCCAGAAGAGTGCAAAGCCATCGAGCGCCGAAAAGC
GGAACATGTCTGccattttgatttggttggatTCAAAGGAAAAGTCAACG
AGTATTGTCGAAAAACATGTGGACTTTgttcttgaaatgttttttttaaa
agattatcTAATTTTAAAACATGACTTTTGTGACAAAACCTCGGGCAAAA
CCTGGACCATTTATTTGAATCTGGGACACTTTCGAACGgtgtgttttatt
tttaatttcgctttCGACCAAAATATTGTTAATAACAAAgcttttgaaag
tttcatttgaatttttaGTTTCGTTCTCGTGAAATTATTTCATCGGATAG
ATTTTCCCGAATCCCGAATGCCATCATCCCCATTGGAAAACTACATTAAA
TTATTATCCCGAATAAAAAAGACact
Run BLAST on NCBI

protein sequence of TCONS_00068973-protein

>TCONS_00068973-protein ID=TCONS_00068973-protein|Name=TCONS_00068973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MTRLLLKLTIVLLAFETVSLSLKKGIVIPGITACGSAELHNKYRRFHKST
PDVDGSNELVKLSQQCASQIIQTGKSTCDHEDSYGINIAILPSVSRTSHL
EELMAAWYSELDSIKFNSKGYENLHYNASTIANATQIIWRSTQKVGCSGV
THPGRHQSSVYVCFYSPRGNYFDKPTDIILNLKPRITPIEAKTKFEECKD
DYPEECKAIERRKAEHVCHFDLVGFKGKVNEYCRKTCGLCS
Run BLAST on NCBI

transcript from alignment at scaffold_491:134357..144167+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068973 ID=TCONS_00068973|Name=TCONS_00068973|organism=Clytia hemisphaerica|type=transcript|length=9811bp|location=Sequence derived from alignment at scaffold_491:134357..144167+ (Clytia hemisphaerica)
gttttttttcatgttttggaATGAATCTTGAGTACTTACTTTGTATAGAT
ATTGATTGAGTAGCTACGATGATGCAAATTCAATAAATTCTTAAGTCTTG
TTTATTGAAATGACTCGATTACTTTTGAAGTTGACCATCGTCTTACTTGC
ATTTGAAACGGGTAAGCAAGAACATTATTCGAAGTatgcacccccttctc
acagtcacagacccggtaggattttttcagtcaatggggataaaaatgac
ggactaaaactcgattGGGATtcatattcccatgtttttcatggctgggg
atttcaatattttggccaatttttccagtgggaaggggttccagtggatc
tgtgaaaagggggtgtaAGTATGTCAGAAATACATTGCTgaaatttatac
tttttcctAAAAGTATTAAAggccggggggagggggtctttagCCAAAGA
TTTTGTGAAATCTGGCCTTTTATCATCGACTGGCTCAAAAGTTCCTTTAG
ACGGAAGACTCTTGCCCGTTAAGACTCTCTTACGCCTGGGCTGTACCCGT
TTTTACAAGATTATTCTTATTCTCTCTTCGCGTCTAAACTATTCGAGACA
GCGTCCTTATCTAGAACTGTTGAGGTTGTCTAACACCCCTGCTGTGACCT
TGAGAATCGTCATTCTAGGCCTTCAGGCCTTAAATGTTTTCTTGTAACGA
TTACTAACATCCTATTTCCTAACTAACAaataattaaaggttttgttttt
aaataagagtgatatcgtttgcttacccatcaattttaatttacaagctt
tttcacgcacgtatgtggagcaagattggtcagaaagagtaaaaaaacat
tttttcgcttatatcagcataatatacgGGAGGCAGACACTTTCcttata
tgaaatatgtgtctgatatgaaacgggaacacttatgtaaaaataaaacc
tttaaaataaaataataattatccACCTTCCAAGGAGTAGACTTTagcat
tttcaaaattcaaaacacatGCCACTTTTGATGTCGTTGGTCCTGTATCG
CCAAGATTTTTGAGAATAATAAGTTGTCCTACAGTTCCTCTCTTTTTTAT
AGGTTTATTTTatagtgttcccgtttcatatcagacacatatttcatatc
acaCATATGTTTTatatcgggacagtgtctgcctattgttattaCACTGA
ATTAACCAAAAGAAATGTCTTTCCtttccacatctgtgtcaatccaatgc
gaaaaagcttgtgaattaaaatagATGAGtaggcaaacgatatcactctt
atttaaaatcaaatccTTTAAGCTCGACATGGTCTAAAATCGCCTTACAT
ATAAGTGGTCGAAAATATGGTACATTGTAATAAACTTGAGCACACAATTT
CGAAATAGTTCTCTACCATATGATGACTAAAGCTTAAGGCAGCAATGAAA
ATAAACGGAAGTTTGCTTCTGATACCCCCTCACAGTATAATGAAACCCGt
gtttttatttgtatttttagtTTCGCTGTCGTTAAAGAAAGGCATAGTAA
TACCTGGTAGTAAGTGACTTAAAAACGAATTTATTGTAAATGTTGTTGCC
AATAAAAATGACTGTCTACATTCTATGTATGTATAAAACGTCTCGCTAGG
CTGAATAAATGTATTTAAAGTActttgatatttaaaaaaaagatatccTC
TAGTTTAAAACTTGAGGTAATGCTTCTTTAAATTTGATAGTTTTATAACA
ATCAGCTTTTATAGCCGAAATAcccttttcggaaagtgtaaaaaacacgt
acaAAGGAGTATCAATAATTAGGCAATTCTAGGTGTTTGCTTTATGAAAT
GTTTTAGTGACTTTCAAAAACTgtactttaaattttgataacATTCTCTA
ATTGAAAAATGTATACCTTATCGGAAAAACAGAGTTGATGGGAAGTGATC
AAAATCTTTTGACAGAACTTTCCATTACTCGCCCtataagactttttaat
ggaaatTTCACACTCAAACTCATAAAAAATAGAAGTTCCCTTTTGGGTAG
AATACCTTCAAGAGGGACTTCAATGAGAACTGActaatttgaaatctttt
tttgtggAAATGTAAGGTGACAGGTGATAATTTCCCCCACCGCTATCTGA
AAACTAcatatattttcttttcagtCACAGCATGCGGTTCGGCTGAGCTA
CATAACAAATATAGACGTTTTCACAAATCAACGCCGGACGTTGATGGAAG
CAACGAGTTGGTCAAACTCTCTCAACAATGTGCAAGTCAAATTATTCAAA
CTGGAAAAAGCACGTGTGACCATGAGGATTCTTATGGAATCAATATTGCA
ATACTTCCCTCTGTTTCTCGGACTTCACACTTAGAAGAACTTATGGCAGC
ATGGTAAATTTTTTAGAATCATGAAATATTTGCCATCACGGGAAACTTAT
AGCGAATACTGCACATGATTAAATACACGGGGTACTGGTAACCACTGAGT
TTGAAGCCCCaggggctagagaggaatcttcaacccttctcaagcaagaa
aaagtgaagtttGCCCCGTATTTAGAAttcttgtttgaaaaacacacgGG
TCACGTGttctgaatgggaaataagtgactTTATTTGtggactagcaaac
tagtctgttaattacttatgtcagagggcgggaacataaaggcggtggGC
GATTGCTAGAATAAGAGCTGCGTAGGAacaagcaaaagttggtgagaggc
tgctggtTAACAGCTTTCAGCCatccgccgacaaaatttcacGCTCACTT
TttccgcgtgataccgttccagtgCGGCTGCTGTGCCAgatcttttcatt
tcttttcatttctcATCATGTTGATAACAAGGACTTCAAGTATTCGGGCT
TTCTTTTTTAGGTATTCCGAATTGGATTCAATCAAATTTAACAGTAAAGG
TTACGAAAATTTACATTACAACGCTTCTACCATTGCAAACGCTACTCAGG
TAAGAATCTTCGTTTTAAAAGGCGGAAATAATTAAAGGCGAAATTGACGA
ATTTTGCCAGGGTAAGTCAAGTTTTAGCTCttgctaaaattcaaaaaatt
actgCCCCGCATAATTTAAcagtaatacaccttttcgaccgtagtcgcgc
agtagggcgcgtgccactttattatttaatttaccaccctaaactcgatc
caatcctttttttacatttttttctattgtctttatgtgcGAAAAAAAgg
ctgggacggttttagggtggtaaaacggacagaAAGATGCCCGCGcagca
attggtggctacggttgAACAGGTGTATAGTGCTTCTTGATATCGAAATA
AACTTTTGCCCCCTTCTAAATAATAGATGATATTGTCATCCGCAGAGGTA
GTAAACGGGGAAAATTAAAGATGTGCAGATTTAACAAACAGCAAGATAGT
AGTTAGAGAAAATTGCCGCGATAGAGTTTCGAAGAATAGCCGTCAATTCT
ATCGCTGCGGAAGGGAAGCccatgtttgattttttttttcggttaaATAA
TGACACTGTCTTAAACTTTAGCATGGTCTACCATTCTAGAAAAAGACCAT
ACCCCTCCCCGTACTACGAAACCTTTTCTGTGTTTCACGTTATCGCTAAA
CCGACCTTTTATCCAGTTTCagccacagatttataaagcccgaggGGCTA
AATGTCATGCTTTAatctcttccaagcaaaaaataaaaaaatattcttgc
tattgttttcgaaagcccgcgaagcttctgattggtggcgctgaaattct
attgtaatgtcatgtGACCTagataggatttcctacctacgACTTTGCAC
TTTtcatctagctcttcgggctttatacATTTGTGGTTTCAGCGTACTTT
GCAATAAAAAAGTcagtagaaaataaaaagaatcttcCATTCAAAGTCTA
CTCTTTATTAGAAAAGCTAGAAAAAGCGTCATTATTCGAAACTCTCACAA
ACCTTGTTTTCTTGCGTTTGCAAAAAACATAGATATGAAACTTGGGGCAA
AAAGGGGGAGTTCTAACCGCGTTTACAATCTGTTCCTTTTTGTATCCCGT
TTCTTGGTTTTCTGGGTTTTagtttaaataaaaattatgtttaaGTTTCT
TCATTCCAAATATTTGACTTAGCCATAAAAGTGACCAGCGACAGACTTCT
CTATTCCCTAATCAAGTATATCAAGCAAGCATATAAAGTGAAGTAACTTA
AGAAGCTTAAACTTTTCATCATGTCTGGTCACAGACTTGTTAGAGGGATG
AAGTTggcgctctcttattcgacgtcCTACTATTCcaatacgctccatta
ttcgacaATATTGAAAGTCATCGTCAACAAGTAACTCTCATAaaacgacg
ttctactattagATACGCTCTTTAAATAAAATGATGACTATTTCGGATGA
AAATTTACTCCTTTAGTTTAGATCAGAATTTCATTTTCTATATAAAACTT
TTTCCTTCCTCCTTTCAATAATAAAACTCAAATGTTTGTCTCGGAAGACT
CTTGGCGAATCGATATCTTCTTTTACTTAGTAAACTTTGCCGCGCctttc
ttgagaaaaaatatttttctatgtttatcaaatttcataaaatttaaaat
aattaatCATAAAGAATTATCATATTTATTAAAATTGTTTCTCGCGTGTT
AGTAAATTACCCCCTCGGCGTATTTAACTCTTCTAAATTATTAACTCCCC
ACTTTTAATATAACGAGTTCCTCCCTGTTATTAGGAAGGAGATATTCCTT
TGANAATTTCATCAGCATTGTTCATCTCATTTATTACTTCGATATCAAGA
TAAGGTTCgtgcatggaggtataaagaaacaggagaagtatgctattgta
accatgctcgccctacgaataaagaaattacgaggtatgcatgctcataa
tctcatatatcgtgcatttttaatgagctcttttgttgataggtgaaatc
ttattggctcagggccggcgaaactaggggggccgggggggccatggccc
ccacacttttttgctaagaaaGGCCCGTCGgcgccattgagtttcaagcc
gaaggctagaggtcaatctccttggtaggatttgaagccaacaaatccta
ccaaagttgagcggccttgagcgacccgcctggtttttacacaaatgaca
gattgaaactaaaatttaccgcttaattttgagaaatatatcagtcgaaa
acaaaggaattgctagattcaatccgtcatcaaaaatacggcgcatattt
taaggcttcaatttttcttgcctgagaaaggttagagattgacctctagc
ccttcgggcttgaaactcaatggtcggcgccaaccatggtggcgcctcct
tagacacttactatttggcccctccactttcaaaattgattcgccggccc
tgtttgagaccttttataagaacaggtGCATTTTGGGTGAGACTCGCCTA
TTCTAATCTTTTCGTGATGTTaaggttttaatgtttttaaaatgttcttg
ataaTCTTTTCACACTATTTGCCAACCTCGTGCCCAGAGTcacttgcacc
actttttgattttattgatttgatgAACGTGTAGAGTCTACTtatggctg
aactttgctttgctttttgataattttttatgacgctcagtccagtgaag
tagaccaGGAGCGTTTGGCAAGGTAGccatttcgagaaaaaaatgttaaa
aatccaaataacactaaaactacttggagttgaaagatataagaAAACTT
AGTAAACTAAGGGACTTGGTTTGAGAGTGTGATTGTCTTAAAAGGGGCTT
TTAATCAGCATTTCTCTTTgtgatttctgaaatctgaggctcaagTTGTT
CTTCATTTGCTCTTACGTTTTGGCCAGATTTAAGCcttgttttcttataa
aaaaccgtgtTTACCATACTGTTCGTATAAAAACGAACTCTCTCAACACT
CAGTTCCAAACCTTTTTATTATCCACCCACTGACTGAATGAGTGCAAATT
TGTATAATGCGAATCGCTACAGGCTTCCTAATAAACACTTCAGAAAATCT
GAAtttacaatttaaaaatatcatggtggatgaatttttttatgaaatct
ttGAATTTTGTAAGAAATTTCTGTGTGAATTTAACAGTTTTTCAGTGTTT
GTGATTATATCTATTTTAAGTATTAAAAACTCAATAATTTAGGCCCGCAT
TGGATTTGGAAGCTTTGCCATGCTGATATTATAAACCTCacgtttacttt
gtaagaaataatcaccgaaaggtatatcacagaaTTTtcgatttgattct
tacaaagtaaTGCTTAAGTTACGCCAGAATTAAACGCCCACGACTTAATT
TCCACCGCAAaatgaggttaagcataccaggataatcacgacggaagaaa
aatgtaataggctagtgaaaatatgaaatttgattggttgaaactcacta
acCTGTTAAAATTTCGTtagtcgtcgtgattttaccgttTTACTTAACTT
CACTATAGAACGTTATCGTAATACTTGCGCTAATGCGGGGCTACCCTAGC
ATTACCTATTAGTTTTTAATGGCTTTTTCTCGCTGTTTTACCCTATTACG
CACTCATGATTTAACAAttctatgattttttttaattttgtttcttaGAT
TATTTGGCGATCCACCCAAAAGGTTGGGTGCTCGGGCGTGACACACCCAG
GGCGTCATCAATCATCAgtttatgtttgtttttattcacCACGTggcaat
tattttgataaaccGACTGATATCATACTCAACCTCAAACCGAGAATCAC
ACCCATTGAAGCCAAAACTAAATTCGGTAAGACAACATTTGAATTTTCTA
GAGATTATTACGGCTAGTTTCGTTTGTATCTATAAGATTAGTGTCCATAT
GGAAACGAAATTTCGCACATAAAATCGCCTCATAACAAGTCAAAAGTAAA
AGAGAAGAAGAAGAGTTTTTTAATACATCTAACAGGTCATAAGTTCCAGG
GCACTTCTACCCCTTCCTCATCCCGGGTtggatccctctaaatcggaatc
aagatcATTCCTGATTGGAAAGTGCTAGGAGCTTGTGCTCTTTTATGCAC
TTTTAAAGAGAGACTAAAGAGAGACTAAACCTacccaaaaacaaagaaag
tatttttggcGTATTCCCAAAAGTAGCACCTTCATCTTATTGGTCTCTTT
AACCCGGGGGTCCCAAAGAAAACGCTGATCCAGCCTTGAGATTACACTAA
CTTACCTTACCAGGTCGAGCTTGCTCGGCTTGCGATGACACGTTCTCTCC
ACTGTTGCTGATGTCCCATAGCATTTGGAAGGTCTTTCTTTAAGCAGCTT
GCATCATCTCTCAGTTGGTCGATGTAGGTTTCGTTTGGTCTGCCCTGCGG
TATTTTTCCATAAAGGGGCTCGCAAAGTATTACCTCCGAGGATTGCACGT
TTTTGCTAAACCAACAGTGGCCAGCAAAACGTAGACGCTGTTCTCGAATC
GCTGATGTAACGCGAGATATCTTACGATAAAGCTCGATATTAGTAAGGTG
ATCTTTCCAGGATTTATTTAACGCTACTTTCACAATCTTGTATAATCCCC
ATCGGCTCGATATCTTGGACATTGAATTCTACACTGGGAAGAAATGGGGC
CGTAGTAAGACAATAGGGCCGTAATTTACGCCGAAACCTATAAAAATTCT
TTGAACCACCTGATGACGTtcaaatttgacgtcaaaaacatattgtattt
tattttctaacgtTATctcatttcactgaagattggtgcctgagcaccat
gaaactccaagtttgaaacaaagatattgtATTATAGAAATTCTTACATA
TGCTTCAAAACAAGGTCCTTTAAACCGTCTCATTTAAAGCCGAACTTTGG
TCCGTTGCGGCCCCAACATCAATTAGGGCGTGCgtaaaatattctttttg
ttgGATGGATAGTGAGCCTTAATAGAACGACTTTGTAAAGTTACTCCTGA
GCCATTTTCAAAAGGCTTGATTTATTGTtcataaaattgaagattttctt
aACCGAAGGTAAGAAACAGAAGGTAAGTAAAGGGAAATTAATCTTTTCTA
CAGatagggaagaaaaaaaaagatggtGACAAAATCGGAAGTCGTATGAT
AATACACATTGACAAAACCAATGGATTTTGATAAGAGATATTTTTCCCCG
CAACTCTTGTCACGAAATTTAGTTTCTCGAAATATTTTCAGGTCAAGACA
ACTTTGGAGGAATATTTCgaagaaggaaaaaaatcatAGCCTAACCGCCA
TCTTTCTATAAGTAGCAAATATTCCCTGCGTCAAAGACACGGTTGGGCCG
CCaaccactggaaaatttggtcgaaatttggtcgccggtggaaaaaatac
cctacaattttagCCTCATtgggaaattaactttgatttcaaccccattt
gaaatttcaatttaaacaattgcactccaaaaccgtCCCCAATGGATTTT
TCGagcttagaacaatagaatttctgtTAAGTGGTCCGGCGTAATTTGGC
AGGCTTCATATTTTGGCTTTacttgaggtggtagcaaataAATGCCACTA
TAATCCAGaccctttttggagaaaaacaaacagaaaaccatgTCCAATAG
accaatttctttcaaattttcgacgtattttaatgtttttattatagttt
cataaactttgatTGGGTTTTAGAGTAATTTTATTCTTTTGCtgttttca
tttaattttttaaaacgaaagtgaaaaaattccaATATGGCgactttttt
atattatttttatttcgttttttatattatagtgctctgaaatatttttc
atcatcAAGGTTTTATTGGAATTGAAGCGTTGATTGGGAAATTAAAAAGC
AAAATATGAATTAGTGGGGGCCCCTTCGTGTGCATACTCAAAGCAAATTA
ACTTGATTCTAAGGAAAAAAGACTTCCTCCCAGTTCTTctagaaaacaaa
aatcattCTTTTCTCGCGAGCTTCCATCGGTGATTTTCGGCTATTCAACT
GTCGCATCAAGGAACAAATTTCAGGCCCGGTGGAATAACcttaaaagtgg
ggaggctgaaggctcaaaatgagatcaAGTTttctaggaatttgagaaaa
aaatctcatttggtCAAAGTTGGAGAGGCTAAattctccccagtctcccc
gcttccgccggggCTGAATTTTCGATTCTCAAAATCAAATGATAGTTATT
GTATGATTGTGAATTATATTAATTGAtggcaaaaataatttttactattc
ttttcgaaaaatttgtttttcatctTCCAGAGGAATGCAAGGACGACTAC
CCAGAAGAGTGCAAAGCCATCGAGCGCCGAAAAGCGGAACATGTCTGcca
ttttgatttggttggatTCAAAGGAAAAGTCAACGAGTATTGTCGAAAAA
CATGTGGACTTTgttcttgaaatgttttttttaaaagattatcTAATTTT
AAAACATGACTTTTGTGACAAAACCTCGGGCAAAACCTGGACCATTTATT
TGAATCTGGGACACTTTCGAACGgtgtgttttatttttaatttcgctttC
GACCAAAATATTGTTAATAACAAAgcttttgaaagtttcatttgaatttt
taGTTTCGTTCTCGTGAAATTATTTCATCGGATAGATTTTCCCGAATCCC
GAATGCCATCATCCCCATTGGAAAACTACATTAAATTATTATCCCGAATA
AAAAAGACact

Coding sequence (CDS) from alignment at scaffold_491:134357..144167+

>TCONS_00068973 ID=TCONS_00068973|Name=TCONS_00068973|organism=Clytia hemisphaerica|type=CDS|length=4356bp|location=Sequence derived from alignment at scaffold_491:134357..144167+ (Clytia hemisphaerica)
ATGACTCGATTACTTTTGAAGTTGACCATCGTCTTACTTGCATTTGAAAC
GGtTTCGCTGTCGTTAAAGAAAGGCATAGTAATACCTGGTAtCACAGCAT
GCGGTTCGGCTGAGCTACATAACAAATATAGACGTTTTCACAAATCAACG
CCGGACGTTGATGGAAGCAACGAGTTGGTCAAACTCTCTCAACAATGTGC
AAGTCAAATTATTCAAACTGGAAAAAGCACGTGTGACCATGAGGATTCTT
ATGGAATCAATATTGCAATACTTCCCTCTGTTTCTCGGACTTCACACTTA
GAAGAACTTATGGCAGCATGGTATTCCGAATTGGATTCAATCAAATTTAA
CAGTAAAGGTTACGAAAATTTACATTACAACGCTTCTACCATTGCAAACG
CTACTCAGATTATTTGGCGATCCACCCAAAAGGTTGGGTGCTCGGGCGTG
ACACACCCAGGGCGTCATCAATCATCAgtttatgtttgtttttattcacC
ACGTggcaattattttgataaaccGACTGATATCATACTCAACCTCAAAC
CGAGAATCACACCCATTGAAGCCAAAACTAAATTCGAGGAATGCAAGGAC
GACTACCCAGAAGAGTGCAAAGCCATCGAGCGCCGAAAAGCGGAACATGT
CTGccattttgatttggttggatTCAAAGGAAAAGTCAACGAGTATTGTC
GAAAAACATGTGGACTTTgttcttgaATGACTCGATTACTTTTGAAGTTG
ACCATCGTCTTACTTGCATTTGAAACGGtTTCGCTGTCGTTAAAGAAAGG
CATAGTAATACCTGGTAtCACAGCATGCGGTTCGGCTGAGCTACATAACA
AATATAGACGTTTTCACAAATCAACGCCGGACGTTGATGGAAGCAACGAG
TTGGTCAAACTCTCTCAACAATGTGCAAGTCAAATTATTCAAACTGGAAA
AAGCACGTGTGACCATGAGGATTCTTATGGAATCAATATTGCAATACTTC
CCTCTGTTTCTCGGACTTCACACTTAGAAGAACTTATGGCAGCATGGTAT
TCCGAATTGGATTCAATCAAATTTAACAGTAAAGGTTACGAAAATTTACA
TTACAACGCTTCTACCATTGCAAACGCTACTCAGATTATTTGGCGATCCA
CCCAAAAGGTTGGGTGCTCGGGCGTGACACACCCAGGGCGTCATCAATCA
TCAgtttatgtttgtttttattcacCACGTggcaattattttgataaacc
GACTGATATCATACTCAACCTCAAACCGAGAATCACACCCATTGAAGCCA
AAACTAAATTCGAGGAATGCAAGGACGACTACCCAGAAGAGTGCAAAGCC
ATCGAGCGCCGAAAAGCGGAACATGTCTGccattttgatttggttggatT
CAAAGGAAAAGTCAACGAGTATTGTCGAAAAACATGTGGACTTTgttctt
gaATGACTCGATTACTTTTGAAGTTGACCATCGTCTTACTTGCATTTGAA
ACGGtTTCGCTGTCGTTAAAGAAAGGCATAGTAATACCTGGTAtCACAGC
ATGCGGTTCGGCTGAGCTACATAACAAATATAGACGTTTTCACAAATCAA
CGCCGGACGTTGATGGAAGCAACGAGTTGGTCAAACTCTCTCAACAATGT
GCAAGTCAAATTATTCAAACTGGAAAAAGCACGTGTGACCATGAGGATTC
TTATGGAATCAATATTGCAATACTTCCCTCTGTTTCTCGGACTTCACACT
TAGAAGAACTTATGGCAGCATGGTATTCCGAATTGGATTCAATCAAATTT
AACAGTAAAGGTTACGAAAATTTACATTACAACGCTTCTACCATTGCAAA
CGCTACTCAGATTATTTGGCGATCCACCCAAAAGGTTGGGTGCTCGGGCG
TGACACACCCAGGGCGTCATCAATCATCAgtttatgtttgtttttattca
cCACGTggcaattattttgataaaccGACTGATATCATACTCAACCTCAA
ACCGAGAATCACACCCATTGAAGCCAAAACTAAATTCGAGGAATGCAAGG
ACGACTACCCAGAAGAGTGCAAAGCCATCGAGCGCCGAAAAGCGGAACAT
GTCTGccattttgatttggttggatTCAAAGGAAAAGTCAACGAGTATTG
TCGAAAAACATGTGGACTTTgttcttgaATGACTCGATTACTTTTGAAGT
TGACCATCGTCTTACTTGCATTTGAAACGGtTTCGCTGTCGTTAAAGAAA
GGCATAGTAATACCTGGTAtCACAGCATGCGGTTCGGCTGAGCTACATAA
CAAATATAGACGTTTTCACAAATCAACGCCGGACGTTGATGGAAGCAACG
AGTTGGTCAAACTCTCTCAACAATGTGCAAGTCAAATTATTCAAACTGGA
AAAAGCACGTGTGACCATGAGGATTCTTATGGAATCAATATTGCAATACT
TCCCTCTGTTTCTCGGACTTCACACTTAGAAGAACTTATGGCAGCATGGT
ATTCCGAATTGGATTCAATCAAATTTAACAGTAAAGGTTACGAAAATTTA
CATTACAACGCTTCTACCATTGCAAACGCTACTCAGATTATTTGGCGATC
CACCCAAAAGGTTGGGTGCTCGGGCGTGACACACCCAGGGCGTCATCAAT
CATCAgtttatgtttgtttttattcacCACGTggcaattattttgataaa
ccGACTGATATCATACTCAACCTCAAACCGAGAATCACACCCATTGAAGC
CAAAACTAAATTCGAGGAATGCAAGGACGACTACCCAGAAGAGTGCAAAG
CCATCGAGCGCCGAAAAGCGGAACATGTCTGccattttgatttggttgga
tTCAAAGGAAAAGTCAACGAGTATTGTCGAAAAACATGTGGACTTTgttc
ttgaATGACTCGATTACTTTTGAAGTTGACCATCGTCTTACTTGCATTTG
AAACGGtTTCGCTGTCGTTAAAGAAAGGCATAGTAATACCTGGTAtCACA
GCATGCGGTTCGGCTGAGCTACATAACAAATATAGACGTTTTCACAAATC
AACGCCGGACGTTGATGGAAGCAACGAGTTGGTCAAACTCTCTCAACAAT
GTGCAAGTCAAATTATTCAAACTGGAAAAAGCACGTGTGACCATGAGGAT
TCTTATGGAATCAATATTGCAATACTTCCCTCTGTTTCTCGGACTTCACA
CTTAGAAGAACTTATGGCAGCATGGTATTCCGAATTGGATTCAATCAAAT
TTAACAGTAAAGGTTACGAAAATTTACATTACAACGCTTCTACCATTGCA
AACGCTACTCAGATTATTTGGCGATCCACCCAAAAGGTTGGGTGCTCGGG
CGTGACACACCCAGGGCGTCATCAATCATCAgtttatgtttgtttttatt
cacCACGTggcaattattttgataaaccGACTGATATCATACTCAACCTC
AAACCGAGAATCACACCCATTGAAGCCAAAACTAAATTCGAGGAATGCAA
GGACGACTACCCAGAAGAGTGCAAAGCCATCGAGCGCCGAAAAGCGGAAC
ATGTCTGccattttgatttggttggatTCAAAGGAAAAGTCAACGAGTAT
TGTCGAAAAACATGTGGACTTTgttcttgaATGACTCGATTACTTTTGAA
GTTGACCATCGTCTTACTTGCATTTGAAACGGtTTCGCTGTCGTTAAAGA
AAGGCATAGTAATACCTGGTAtCACAGCATGCGGTTCGGCTGAGCTACAT
AACAAATATAGACGTTTTCACAAATCAACGCCGGACGTTGATGGAAGCAA
CGAGTTGGTCAAACTCTCTCAACAATGTGCAAGTCAAATTATTCAAACTG
GAAAAAGCACGTGTGACCATGAGGATTCTTATGGAATCAATATTGCAATA
CTTCCCTCTGTTTCTCGGACTTCACACTTAGAAGAACTTATGGCAGCATG
GTATTCCGAATTGGATTCAATCAAATTTAACAGTAAAGGTTACGAAAATT
TACATTACAACGCTTCTACCATTGCAAACGCTACTCAGATTATTTGGCGA
TCCACCCAAAAGGTTGGGTGCTCGGGCGTGACACACCCAGGGCGTCATCA
ATCATCAgtttatgtttgtttttattcacCACGTggcaattattttgata
aaccGACTGATATCATACTCAACCTCAAACCGAGAATCACACCCATTGAA
GCCAAAACTAAATTCGAGGAATGCAAGGACGACTACCCAGAAGAGTGCAA
AGCCATCGAGCGCCGAAAAGCGGAACATGTCTGccattttgatttggttg
gatTCAAAGGAAAAGTCAACGAGTATTGTCGAAAAACATGTGGACTTTgt
tcttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042978XLOC_042978Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068973-proteinTCONS_00068973-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068973-exon-scaffold_491-1491911889:134357..134517TCONS_00068973-exon-scaffold_491-1491911889:134357..134517Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1510915933:134357..134517TCONS_00068973-exon-scaffold_491-1510915933:134357..134517Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1575043694:134357..134517TCONS_00068973-exon-scaffold_491-1575043694:134357..134517Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1491911889:135877..135915TCONS_00068973-exon-scaffold_491-1491911889:135877..135915Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1510915933:135877..135915TCONS_00068973-exon-scaffold_491-1510915933:135877..135915Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1575043694:135877..135915TCONS_00068973-exon-scaffold_491-1575043694:135877..135915Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1491911889:136531..136759TCONS_00068973-exon-scaffold_491-1491911889:136531..136759Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1510915933:136531..136759TCONS_00068973-exon-scaffold_491-1510915933:136531..136759Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1575043694:136531..136759TCONS_00068973-exon-scaffold_491-1575043694:136531..136759Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1491911889:137268..137355TCONS_00068973-exon-scaffold_491-1491911889:137268..137355Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1510915933:137268..137355TCONS_00068973-exon-scaffold_491-1510915933:137268..137355Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1575043694:137268..137355TCONS_00068973-exon-scaffold_491-1575043694:137268..137355Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1491911889:141055..141232TCONS_00068973-exon-scaffold_491-1491911889:141055..141232Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1510915933:141055..141232TCONS_00068973-exon-scaffold_491-1510915933:141055..141232Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1575043694:141055..141232TCONS_00068973-exon-scaffold_491-1575043694:141055..141232Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1491911889:143737..144167TCONS_00068973-exon-scaffold_491-1491911889:143737..144167Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1510915933:143737..144167TCONS_00068973-exon-scaffold_491-1510915933:143737..144167Clytia hemisphaericaexon
TCONS_00068973-exon-scaffold_491-1575043694:143737..144167TCONS_00068973-exon-scaffold_491-1575043694:143737..144167Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_491supercontigscaffold_491:134357..144167 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	5.15048e-06	2.18156e-05	0.000525783	0.00175284	0.465469	0.366835	1.23705	0.888434	1.06328	0.977706	7.74075	7.49228	0	0	1.48122	1.55623	31.4671	30.3408	5.89453	5.41896	1.46535	2.5609	0	1.39653	0	2.15745e-05	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR003582ShKT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068973 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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