TCONS_00069011 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069011
Unique NameTCONS_00069011
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2204

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069011 ID=TCONS_00069011|Name=TCONS_00069011|organism=Clytia hemisphaerica|type=transcript|length=2204bp
ATCTTCATATACCGTACTTCAATCGGACGACGACTTATGAAGACGTTCCG
TTTCGCGTAAACCGCCCCGTCGGTCGGGATACGCAATCAGTCGAAGAGGG
CAGAaagatcaaagatggcggataaattttaacattttcaactTTGTCAT
TTGTCTTTAAAGTTTAGTTGTCAATGGTTGCCATCTATCCCAATTGTTTG
GAATGTCATTAAAGGGAAAATGTCAGTATCTGGTATCAAGAGTAAAAGac
aaagtgaaaaaagttcacggaaaTTGAATCAGAAATCAAAGAAGCTGTCT
AGAAGTTGGCCGAATAAtatccagaaaatatttgaagataATCACGGTCC
AATGGTCCACAATGCTACAATTTCACGTcaacctaatttttcatcaatct
CAAGCTTGGCAGAACTTCAGATAGAGGATTCAAAGCACTCACATTCAGCT
AGGAGCCACTTAAGCAAGTTATTTGGGCTTTTTGATTGGCCATGGTTTGC
TACTTCAAAAGAGGAAACTAAAATGGAGAACAGCTCAGAAGATTATCCTA
TCCATATACCTTACAAACGATTTTTAAACACTTCAAGAGTTAAATTATTC
TCCAACAATTTGGAATTCGATGACAAAATCGATAAATTGTCACATGTCAA
TGTTTTGAGCTTATCAAAGAATCAATTCTCTTCTGGAGATGGGATTGTGT
ATTTGCCACCCTCATTCTCAAGGTTAGAGAGCATTAAAGAACTTGATCTA
AGGGGCAACCCCCTGAAAACATTCCCAGAAGTTATTTTAAATCTTCAGGA
ACTATGCACCTTGAATATGGCTGATTGTCAGCTTGAAGACGTTCCGCGAA
ACATCACCAGACTGACCaagttgaaaaaacttttattggaaaataatcaa
attaaattgcaaaatgttGTACTTGATTTTCCAAACTTAGAACAGTTATA
TTTAACAAACAATAAGATTTCAGATATAAGTGGAATTCAAATGAAATCTC
TTTTGAACCTTGATGTTTGTGAGAACTTTATTGATCAAATTCCAGATGTT
TTAACAGAGAAATGCTGCTCATTAAAACAGCTTGTAATGAAAGGTAACTC
TATcaccaaaataccaaaatccatcaaaaacctAAAAGCGttaaaatggt
tggatttgagTCAGAATTTATTAACTAAGATACCAAAAGATATTGGTGAA
GTATCTACATTACAATATTTGAATTTATCTTGGAATGATCTGACTGCACT
ACCAGAAAGCATCACCAAGCTGAAtaaattgaagaaattttattgtggAG
AGAATCCTTTACAACGACCACCATATGAGATTGCTAAAGAAGGGCCAGAT
TCCATCAGATCGTATTTCAGAGCTTTGGATGGTTCAGCTGCGTTGACCAG
CAAACGATTGAAGCTTATGATCCTTGGCAATGAAAAATCAGGGAAAACGA
CGTTAGCGAAAGCCATTTATTCCTATGAAGAACCTGAGCCAGTTGAGGAG
CGCACCATTGGAATGGACTTCTTTGAATGGAAAGATAAGAATGGTTTGAA
TGTATTGATTGTTGATTGTGCTGGTCAGAAGAAGTACATTCTTACACATC
AGATATTCATGCAAACTGgtATCCTTTTTGCTgttgttttaaatttgaaa
gattACAATATGACGGAGGAGGCTTACAATACCATGATTGGAGAATGGAT
CGAGCTCATTTTAACATCTGTTCCCAATGCCGTCATTCTAATTGTACCCA
CATTCATCGATCAATGCGGGTCTCTGGAAGAGATAAAACAGAAGTGTCAA
CACATTTTAACATTAGTGGATAAGAGGCGTCGCAAACGACAAGAGATCCG
TATCCGTTATGAGACACGCAGCAAAGGTTCTTTCGAACGTGCTCACAAAC
TGAAACGTGATGACATACCAACGCTGCCAGCAAGTTTTCTGTTCAGAAAT
AGTGTTGAAGAAGAGACCAAGATTCACCATCTTCATAAAGAACCACGTGG
AGGAGAGGTTTCTTCTACTGAAGCGGTGACGTTTACTCCGTCAGCAGACA
ACAAATCAAAAGTCTACCTCATCCCTGTTTCAAACAGGAAGCATCTTCAT
GGGTTAACGTTGCTTNAGCcacatggaattattatgaTGACATTTAGCAT
TCCTTATGGGCAAAAGAGACCAGATTTGATAGCAATGAGTTTGCCTCAAA
AGGC
Run BLAST on NCBI

transcript from alignment at scaffold_491:443636..459676-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069011 ID=TCONS_00069011|Name=TCONS_00069011|organism=Clytia hemisphaerica|type=transcript|length=16041bp|location=Sequence derived from alignment at scaffold_491:443636..459676- (Clytia hemisphaerica)
ATCTTCATATACCGTACTTCAATCGGACGACGACTTATGAAGACGTTCCG
TTTCGCGTAAACCGCCCCGTCGGTCGGGATACGCAATCAGTCGAAGAGGG
CAGAAAGATCAAAGATGGCGGATAAATTTTAACATTTTCAACTTTGTCAT
TTGTCTTTAAAGTTTAGTTGTCAATGGTTGCCATCTATCCCAATTGTTTG
GAATGTCATTAAAGGTATAAAATTTCAAGTCTTTACTTAATTTTTAAAGA
AATTATATGTGCTACTTTACTTGTAGCCTGCCTGCTGGCAACGCCAATAT
ACAAAATACCTTGTTGCTCAACATTCATAATAGTCTGGAGACCATACTCT
GTACAAAAATATTTCTATCCTGTTAAAATCCCAACAACTTCACTGAAATA
CAGAGTATGGAATTATTGACTCGATTCAAATCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNACTTTTGTTTATCAAATCATAACAATAAGATATTAGCCAATC
AAATTCTGCGATTAATTCTTGCATCTTGTATAATTCCCGGCTACTACTGT
CTATACTTTGATACTTTTTTGAAACCACATAGACAGAGAATTCGGGTCTC
CCAGCTACATTCATAATACAAAGTTCCTAAAATTTTAGAGTCTGGTGTAA
CTAAAAAGGACCCTGCCAACGCACCGGACTGTCCGGTGTATTTGTCCGGT
TGCAAGATCCCTTCGCTACACCGTACGCAACAAGTCCGGTGTCAGTTCGG
TGTTACATATATACAGAGAATTTTGGACGCCGGACAGACATTTATGAAAC
AAAAAGTGAAGAAACACCAGACGCACCGGACTGGCGGCTAGTTCGAAACA
CGGGTCTGGGTCACAGGGCACGGTTTATGGGGCACAGGTCACAGGGTGAC
GGGGCAGCTCAGATCAAAGTAATTCAAACAGAAAATGTTTTAAAAACACT
AAAAATTATCGAAAAAATCAATTTTAAGGTTTTTTATCCACGTATGACTA
TTTTTAAAACGCTAAAACCTAACCACGTGCTTTCCACGTGCTTTCGAAGT
TTGCGTCGTGTATAATGCAGACCAGAAAACACGGCAACATATTACATACA
TACAATACAGGTATATGTACCACAAAACCCACAGGTACCTCAAAACCAAC
AATTTCATTTCAGGAGTTCTAGAAAAATCTAAAATGTTTTTATCAGCAGA
ACTTTTTAAGATTATGTTGGCATAATAGTTTCTTTATTATTATTTAAAAC
AAAATTGAGCATTATTGATTGGGTAAAAGTTTTTTATCAAGATTTAACGC
TAGAAATCTAACTTCAAAATTTTTGATTTTTTTTCAAAAAATGGTCAGAT
AAGTCACTTGCTATTGACTAACCTATCAATCTTTCGTTTTCTATTACCTC
TACACATAACACAAATATAGGAAAAAAGTGCTGTAAGCAATGTGTTTATT
TTAATTGCTCTCAAAAAACTCACTTTTTAATTGTGGGTTTTGAGGTACAA
ATGAGAAAAATTGCGAGTTTTAGAATTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTCAAAAGC
TTAAAAAAGTATGGATATTACATCATATTTACTAAAGCTAGACGGTTTAG
TCCTGATACTTTGTTAAACATATTTTCAATTGAATCATAATCTGGAATGT
TCATTTTTTTCCTCGAATGACCTTTAATGGCCCAGCTATGATGTCATGAA
CTGGGAAAATGCTTATATCTGGAAGATGGTCTGTGGTGTTTTCAAGAACA
GTGCCATTCCTAACTTTAGGCTTTAGACAGTGTAACTGAATTGAGTTAAC
AGTGCCATCTTCATCTTTTAAGAATCTCTTCAACAAACGACCAATATACA
ACCTTTTTGTTTTCTTGGTGGTGTAGATGGCAGCATACCATAGTCTCTTT
TGTTGGCGGTGCCAGGCCTTTCCAGCAATTCTTGAGTTTTTTTATGTCGC
TTTCATCATCAGTTTCATCTTCGGACATTTTGCTTACTTCAGATTAAAAT
TCCTCACCTTCCTCATCTGATGACGAATCCTCCTCAAACAATCGTTTAGA
GATTGAATGTTGTTTGGTTGGTAATATCATCAGTGGTTTGATTCCATTAA
CTTTATAGCTTGCTTTGCTGCAAACTGAACGAAGAAAATAGACATACTGG
GGACTGCTTTAATCCCAAAGCCAAGCATTTTTGTTGTAAACAGATACATT
AAGTTTTTGCATTTGATGAATGTTTCTCTGATCTCCTCTCTCTTCTTCTT
TGTTTCTTCTTTTTCAGTTTCCTTCTTCAGTTTCTCATCCCTGATTTCTT
TGACCTTGGTTGCTACATCTTTAGCCCTCATTGAGTTGTGTACCTGAGTC
ACCCTTGTAGTTGTGGTTGCTTTCTTTTCTTCATTTGGCTTAACNNTGGA
GTCGATGTAGATGTTGATGGAGGCATTTCTTCTCGTATACATGCTACTGC
TCTGTCAAACTTATCTTGCTGCATGAAGTTTACGCCCAATCCACTTGATG
TTATTCCAACCCGCTTGGCACATGAAACTAATGTATCTTTATCTGTCCAT
TTAGGCCATATCTCTCCCAAGATAGTCATAAAAGCCTCACGATTTATGTT
TTGCATGGGATTAAAAAGGGGTTCTTAAGCTTTTCGATATTCATGGTGGA
GATTTAACTGTAATTGCACTGTAATTTCAACAACCTCAAATGCTTTGCAA
AGTCTCCTTTTCATAGTAGAATAATAGTTTCATTTGCTTCAATTAATGCC
TTAAATCAGTTTGATTCACTATCCAGACTATGCAAAAAAGTTTCTATCAT
TTGCAATAAATAACTATGTACGGATGTTTTGTAACTTTCATGAGTGCTAA
CAATAGTCAATGCAGTTTCCAAAATCATTTTAACACAACTAGGAAAACAT
GTAAGCCTTAATTTTTACATACAAAATACTTATATGAAATACAAAATCAA
TTGTCAAAAAGTTTCAGGTAGAAATATAACGAGGGGAGAAATAATTTGCA
AAACTCCCTTGTGGGTTTTGAGGTACATCTATTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTATTGTGGGTTCTG
TGGTGTAATAGGTAATTCTATTGAGACTAACTTATCAACATATGAATAGT
TCTACAACAAACTTACCTAGATGTACAGGTGCAAATTTTTACCTTGATTG
ACCCAGTGGACTTAAAGATATTGTCAATAATATAATTTATAAATGTGGGT
TTTGAGGTACGTATTCAAAAAAAGGAAAAATTTTAAAAGACAATGATATA
AAAACAATCTAACATATAACATTGAAAAATATCAGGAAGAACTCTTTTCA
TGGGACTCCTCGCACCATCAAACAATTTTTTTGATAAAGGCAGCCCAAAA
AATAATTATTTAGGTCAGAAATTTAGTGTGGGTTTTGCGGTACATATACC
TGTAAGCTTATATTATCAATAATACACTTAGTGTTATATGCATGTTATAT
GTTATACGTAAGTAATATACATATTACAATTCCCATCGCCTGAAAAGCGA
GCTTTCTCACGAAAATGATAGTACGGCTATTGTTAAATCATATCTCATAG
ACCTTTTCGCCTTTCCGTCCGCCATCTTGAATTGTATGCAAAAATACAGT
ACAGGAACGAAAATGCCGTGGCTGGATTTAGTTGGAATGTATGCAAAACA
TATGCAAGTTTACACAAAGATTAAAAAGACAACAAAGCATCTTATAAATA
AATATTATGATCATTAGAACAATAAAAGATGGAATTTCTTAATCTAAAAG
GAAATATTTACAGAACAACAAAAGCCTTTTAGGAATTTGAATTGAATTGA
ATTGAATTGAATATATTTTTGCTGCAACACAGCCGGATAACCCCTTACAA
AAAAAAATAGATTTCTCTAATACAATGGGGAACCTAGAAGAAACTGAAAA
ATTATTACAGAACTAAAGAAAAAATGAATAAACGATTATCATAATATTAA
TAGTGACAACAAAATAAATGAATATAAGAAATATTATTTTTATTTTATGA
CAATTTCTTTGAGTAGTTTTATTTATAAAGTTCTTCCTGTTACACCACCC
ACCCCCTCCCACCCTGGGAAAACACACTAAGTTCACGCACACACAATACA
CGCACACATACACACACACCCACAAAGATTATTCGTCTTCAGCTTTGTAT
TTGTCTAAATAGAATTTTGTAGCTAAAGATTTTAGTTCATCAGTATCAAG
GTTGTGAAAATCAGTGTCAGGATGATTTATTAGTAACTCATTCCATTGTT
TTGACGAAAGACGAGAGAAAGAGTTAAGTCCAAAATTTGTGGTTTTGACC
GTTGAAAGTTTTAGTAGTTTAATAGCTTTGCCCCTGGTGCCAGTTTTGTG
ATCAATTTCATCAAAATTAAGTGTTGATAGGACATCAGATGGAAGATTAC
CCTGGAGGTATTTTTGAATAAATAAGATATTCATTACTTTCACCTGATCA
AAGATTTTGAGTAATTTAAGCTCAGCAAACAGGGGATTGGCAGAAGTTCT
TGGCTCACTAAAGGTCATGAGTCTTAGTGCAGTGTTTTGTCACACAGTCC
CCAGAGTTGACTAGCATAGCGAACATGAGAAGCAAAAATTGCATGATAAA
TGTTTAGAAGGATGTGAAATTGGAACATAGTGACGAAGTTTGGATATTGC
CCTATTTGCCCTTCTCAATGTAGCATCAACAAAAGAAGTATGAACCTTCC
AGTTTAAATGATTGTCAAGGTGAACAGCCAAATACTTCACACTCTTACTT
GGTGATAGAATTTTCCCGCAAAGCTTAATTTTTGGAATACAGTCCATCTG
TCTCCAAGGGGAACGAAAAATAACAAACTCAGTTTTGCTAGCATTCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAATCTGTAT
CCAGTCACATGATTAGCATCCTATTGACTATGAAAAAACATTTTGCTGTA
AATTGGTTCAGAGGCCTTATATTTCATGATTTTGACAATGTCTTCAATAT
CATTTTGTCAAAATTTGTAGGTGACATATTATTGAAAAATTTTCATGATA
ATACTATTCGTATATAATTGTTTCAGACATAGTATTAGTACTATTATTTG
TGTTATGTAGTACGTTTTATGGATTATACATCATGATATCGTTATATTTT
TTCGGGTCTGTAGATTGTATGCCCCGTGACCCGTACCCCGTAACCTGTGA
CCCGTGACCCGTGTTTCGAACTAGCTGCCGGACTGGTCATGTCCGGTGGA
AAAAAATATCCTTCTCCGACACCGGACATCCGACTTCCTTAAGTCCGGTG
TAGAGATTGTCCGGTGTTGGTTAAGTCCGGTGCGTTGGCAGGGTCCTAAG
ACCTAACTAAAAAAGTCTGATAAGTTTGTTTGATACCGTCAACTGCTCCA
ACTTGGGACTATCTTACGCAACATGGGACGGCCATTCCACCACCATTTCA
CCACCATTTCACCGAACCTCCAAAGTCATTTGATTTGAGTTTAATGAACC
GCGTATTAAAATTTACATGATTTCTCTTTCGCACTGAGTAGGTTTTAAAT
CTCTAATTCTCCAATCAGCATCCGGTCATTTTGAATGAAAACAAAAGTTA
AAAAGGGTGCNGAAATATGAAAAAAATCCGTAGTGGAACACGCACGAGTG
TCTGGAACGAAGAAGACTTAATTAGTAGCAAAACGATGGAGGGCAAAATG
ATTTTAAAGGGAACCAAAAAGTGCATCTGGGAGCTGAAAATTTTTTTTCA
GTTAACATTTTCAAGTTTATATGTATCATTTATCATAGTATCTTAAACTC
GTTTGCAGTTGTTTCTGAGCTACAGCACTTCCGAAACATGATTTTGCCAT
TTTTTAGGCTAAAAAGCCTTGAAATTAAAGCTTTTTAGCCTAAAAAACAG
CCACAGCCATATCACAAAAAATACAATGAATGCTGCAGTTTTAGTTATTC
AAAATCTAACATAGGCCAACAATTGATCAAGAAAACTCATTTACAGTATG
TTGGCCTTCCCTGGATTGAACGGTTGAGGATTTTATTTTCCAAAAATCTT
GGTTACGGAATGACGGAAAAATTAAAAATGCTGTAAAGTTTTAAGGAAGC
ATTTTTAGAGTAAAATATTTGGCAAGTTTTTACCTCTTACTGAGTACTTT
CAAACCAAGCATAAATTAATTGCCATTGGGGGAAGACTGGTTTTTAATTG
AGAAATCATTTTTGGTTACGGAATGACGGAAAATTATCTTACTTTACTGA
AATAAAAATTATGAAATTTTCACTTAACCATATCACCTCAAACATTTTTT
AAGCTGATACAGTAACTTTGTGTCAAAATCTAAGCATTTGATTTATCTTG
AAAACCTTTCCATTAACCCTATATAGGGTTCTAAAGTTAAATAAAATTTT
TACAGCCGATTCTGTTTCATATCATGTGTACCGCATTCATGATAAATTTA
AAAAATTAGTTGAGTGTTACCAAAAATCTTTTTGATTTTCTCAAAGTGTT
ATAGTTGCTATTGCTAAAAATCAAGACTTTGATAGCATGATCATCAGTCA
GTGTCAATTTATTAACCACTTTAACAATGCAAATTTTTGGGTGACACTCT
GTTTCATGGAAAAAATGGGCAGTTTTTGAGCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTAT
TGTGCATCCTCTGAAATTAAAATCATTCAATGACAATCTCCACTTTATGC
ACAGTATCCTTTTGAAATCAAGGTGTTCTCTGGTTCCCTTTAAAATAATT
TTGCCCTGGAGCATTTGACGTCACTCGCACGGCAAGTTACACACTGTCTA
TTTGTTAATCCCATTAACGTTCCCATTAGGCGGTAGGCGGTTAGGCGGCA
GGCGTTCTCTAATTCTCCAATCAGCATCCGGTCATTTTGAATGAAAACAA
AAGTTAAAAAGGGTGTGCTACAGTATCAGTGAAAGTTATCGTGACAGAAA
GTATGATTGATAAACTTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAG
AGATTTAACAGTAAGTGAAAATACAGGCCAGATATCAACAGTTCCCATGT
TGCGTACACTCGTCCCAAGTTGGAGCAGTTGACAGTACCGTATGTTAACC
TTAAACACCGCTGTTTTAAAAAACAGCGCGCACTGCTGCCGCTGTTTTTT
TTCACGGAAAATGTTGTTCATTGACCTCACTCTCTCATTCGGCCTGTATA
TATAACGTACACGGTACGTCGTTCGGCTTCTAAAGGTTAATGAACCCTTT
GTTGACAGAATCTCAAAACTTTGGAAACCCAGGCATACAGACATAATAAC
TTACCATAAAACCTCTTTTACAAACTCTAAAAACTTTCAAAACTACTTTA
GGCGGCAATCACAAATATCTTTGTTTTGCGTTGCCCGACCAACTCTCAAA
AATGAATTGATTCTGTGTGAATCGGTAAATTTATTGTTTTTTTTCTGTTT
TCTTTCGATGACGTTTCCTTCGTTCAAAAATTTTATTATTGCCAATTTTT
TGCAAGTGATTTCTAGCGTATTCGCGGCATTTTTACTTTGTTTATCATTA
CATTCCCCATTTTGGGTCCGAGGTCACAGTGTTCAAAGGTCATAATTTGA
AACCACCCATAACACGCGGTTGTTTTGGCTGCTGGCTAGCTGGTAATTTC
CTTCAAGAATACACTCCAAAAATCGATGATGGAGGTCTTACTTATAATGG
AAAACCCGAAAAAATTTTACGAGTGACCAACTCACTTTTAGACCCAACGA
GGACGCAAAATAAAGATATTTGTTATTGCCGCCTTAAACTGCATCAAAAC
ATCAGCCACATTTATAAAGGCTCCTTTTCAGCCTGTTTCAGCAGCCATTT
TGTTTTGGTTANGGGAGCAGATCTCAAACCTCAAATCTACGCCTGAGATA
TCCGGCGCACAAGCCGCAATTTCTAGACTGGCTAGAAATGAACCTGTGTT
TTCATTTCCATTTGTTTATCTTTTTTTGCAATATCAGCTTTTTCCATAAA
TTATGTGTGTGCATAGAAAAATATCGAAAATCCCGCGAAAATTCTGCTCA
ATGACTGGCGCGTTTTAACCAATTAGATACATGCGAGTGCAAGACAAGTA
TCCCTGCAGGCGAGTTAGTTGGACCAGACCGTAAACCAGAGGCAAAATAT
TAAAAAACTACGGTGAAATAGTTTACGATCTGACTTTCTGGCGCACAACA
AGATTCTTGTTGTAAAATTTTCTGCGGGAGGACTATTTTCCTCAGATGTA
TAATTTTCAAGTGCCTTTAGAGATTTACCGTGCACGTAAGAAAATTATGA
ACAGCTGTTATCAGGTTAGGATACCCAGGCTATATATGTTTCACCTCCAT
ATTTCCAGATTGGGTTAACCTTTTTCATGAAAATTGGCACAAAGGTACCT
TGTTATGAAAGGAATAAAGTCATAAATATATATTTTTTAAATGCATAGTC
ATGTGGTGACGTTTTACACCCATTTCTAATGTTAAGGGGCCACTCACAGC
ACACATCGATTTTTCCCACGCTTAGCGTCATTCTGACGCCAATTAAAAAA
CCCACCCACCCTTACCTTTAGCGTCATATTATAAGATAATACTGAAAATC
AATGTTTTTCCTTTCTCACCTCGGGTATTGATGTTTCACTGCCAGGGAAG
TTGCTTCTCCCGCTACTTACTTGGTACATTTTGCTTGTTTTCCGAGTAGT
GGTTCAATATATAACTTTTACATAGATTGGTTCCCAGACCCGCATAAGTT
ATGACGCGGGGAAAAAAAGATCCCAATCAAAAATAAACCCCTGTTTGTGA
CATTTTTACTGTCAGCCACTAAATTGACCATAATTTGGGAAAATTATGTG
GCTTACACTTAGGATCGCTTTGATGGTTAAGCTGAGGAAATTAGCTATCC
ATTGCATAAAGGGATAATTTTTGTGGCTTACTAGGGGAGTTACAAGCACT
CAATCTAACCCCCCCACCCTATAGCATCGGAATGACGCTAAGCAAGGGAA
AAATTGATATGTGAGTGGCCCCTAAATCTTAAACCTGAAACTTGTGAAAA
CCACTGGAAACCAGTGAAACCCAGTGGAAATCGATGGAAACCCACTGGAA
ATAGGGTGGGGCGAAAATTCATGTCTTTGGGCTCTTCCAGAAAAAAATTG
TACATTGGGGGTGGAGGATAAAACAATTTTTAGTGATTTACCCCCCGGAC
AGGGTGACTTTTGGCCCCCCGGACAATAGGTTTTACCCCCCGGACAAGCA
TCTGCTGACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACCCTA
TAGCATCGGAATGACGCTAAGCAAGGGAAAAATTGATATGTGAGTGGCCC
CTAAATCTTAAACCTGAAACTTGTGAAAACCACTGGAAACCAGTGAAACC
CAGTGGAAATTGATGGAAACCCACTGGAAATAGGGTGGGGCGAAAATTCA
TGTCTTTTTATGAAAATTTAACCTATTGTGAACCATATTCTGCGCAATTT
TTTAAGGTCAGAAGTCCAAAATTGGCCAAACCCACTGATTCACACTTCAG
GCAAAAATTGGAAAAAATGGCATTTGCTTTACTAAATTTATGAGAAACAA
CAAAATAATCAAATTGGGTTGAAAATTGTGCCCATTTGAGCCCTAAACGA
GCCGTTTTAAGCCAATTCTGGGTAGCAAAATGCATTTAAAGGCCAATTTT
GCAACTTCATAAACTTTAAACTGATTAATTCACCTGTCTCAAATTTTTCA
AAATTTGAGAGAGCCTTCAATAAAGTCTTTCAGCAAAATGGATTTCAAGT
TTTTTTCACTTTTTTCAAAAATTCATAATGGCATCTTCAAAAATCGCTTT
TTAGCAAAAAAAAATCATATTTATCAAAAAATAGCATTTTTTAAGGCAAG
CTTCTACAAACTGAGTTTAAATGCTATCTGAAATTTTTTTTTTACAGTGA
TACTGGGTGTCCCTGAAAAAACAAACTTTAAAATTGCTTCATTAGATCAA
AAGTTATGACAAAAAGAGTAAAAAATTGTTTTTCAAAAAGAGCGAAAAAA
GAAGAAAAAATATTTTTAAAGTTTGATATACCAAAATTTAAGTTAAACCC
TCCTCTAAAACTAAACGATTTCGAAAAGTGGGTTTCCATCGATTTCACTG
GTTTCCAGTGGTTTCCACAGGTTTTAGGTTTTAGATTTAAAGGCCGGCGC
AAATGAATCCAACATTCAATCCAACATTTCCAATTCATTGTTGGACAAAA
TGTTAGACGAAAAGTCACGTGGGAAAATTCGAAAAGTTGTATGAAAAGTC
ATTTGCGCAAAAACGTCAAACATTTTCATCCAACATGATTACGCAAATGC
ATCCAACATTGAAACCAACATAAAAGNAAAAGTTTGATAGCGATCAAACT
TCATCCAACATGATTTCCAACAATTTTCTTAATTTTCTTAGAAAGTTGCA
ATTTTATGACTTGCACAAATGAACCCAACATTTGATCCAACAATAATGTT
GGATCAAAAGTTGGATTCATTTGCGCCGGCCTTAATGAATTTCTAATTAT
GGGCAAAAATCTGTGAAAACTGGTAAAATAGGGGTTATCTTTAAGTTGCC
ATAAATTTGGAGTGCGAAAAGATTCAGTTTTGATTTTCGATTCCTTCAGC
AAAAAGGTCATAGAAACTTTCTTACTTTTGCCTATTTCTCCTGGTATAAT
TGAGCTAGAAAGCTGAAATTTTTTACACAACTTCAGGATATCATGAGAAA
TAGGAAAACATACAATAAGGCCATTTCGGTCCAAAACGGTCTTCAAAACT
GCTAATTGGCCCCACCCTGCCATACACCATCTTGAAATAACCTCATTTTG
GGAAAACAGTTATCGAATTATGATGTACATCTGGAAGTGAGTCACTGCAA
AATTTTAGCCAATAACTCCAAGTAGTTCTGTTTTTATGGCCATTTTGATA
TTTACAAGTTCTGCTTGTTTTTGGGTGTCACAGGGAAATTGTTATGAGAT
TTTTTGAATTTTACTTTCTAATATAATTTCAGTGAAAGTCAAAAAAGTTT
TTTGTCACAGTCAGGGTAAATCCAAACTTTTGTAAACTCCCCTTTCTAAA
AAAATCACTGGAAGGGAGGATGGACAGACGAGGCTAAATTAAAGGATAAA
GGGTACAAAGTTACTTTGTGTAGACAATTTAAATAAAGGCAGCTTTTATT
ATCAGGAATTATTTTTTCGAAAATAGAATGAATATGAAAAAACAATTCTC
TTTTTTTCAGGGAAAATGTCAGTATCTGGTATCAAGAGTAAAAGACAAAG
TGAAAAAAGTTCACGGAAATTGAATCAGAAATCAAAGAAGCTGTCTAGAA
GTTGGCCGAATAATATCCAGAAAATATTTGAAGATAATCACGGTCCAATG
GTCCACAATGCTACAATTTCACGTCAACCTAATTTTTCATCAATCTCAAG
CTTGGCAGAACTTCAGATAGAGGATTCAAAGCACTCACATTCAGCTAGGA
GCCACTTAAGCAAGTTATTTGGGCTTTTTGATTGGCCATGGTTTGCTACT
TCAAAAGAGGAAACTAAAATGGAGAACAGCTCAGAAGATTATCCTATCCA
TATACCTTACAAACGATTTTTAAACACTTCAAGAGTTAAATTATTCTCCA
ACAATTTGGAATTCGATGACAAAATCGATAAATTGTCACATGTCAATGTT
TTGAGCTTATCAAAGAATCAATTCTCTTCTGGAGATGGGATTGTGTATTT
GCCACCCTCATTCTCAAGGTTAGAGAGCATTAAAGAACTTGATCTAAGGG
GCAACCCCCTGAAAACATTCCCAGAAGTTATTTTAAATCTTCAGGAACTA
TGCACCTTGAATATGGCTGATTGTCAGCTTGAAGACGTTCCGCGAAACAT
CACCAGACTGACCAAGTTGAAAAAACTTTTATTGGAAAATAATCAAATTA
AATTGCAAAATGTTGTACTTGATTTTCCAAACTTAGAACAGTTATATTTA
ACAAACAATAAGATTTCAGATATAAGTGGAATTCAAATGAAATCTCTTTT
GAACCTTGATGTTTGTGAGAACTTTATTGATCAAATTCCAGATGTTTTAA
CAGAGAAATGCTGCTCATTAAAACAGCTTGTAATGAAAGGTAACTCTATC
ACCAAAATACCAAAATCCATCAAAAACCTAAAAGCGTTAAAATGGTTGGA
TTTGAGTCAGAATTTATTAACTAAGATACCAAAAGATATTGGTGAAGTAT
CTACATTACAATATTTGAATTTATCTTGGAATGATCTGACTGCACTACCA
GAAAGCATCACCAAGCTGAATAAATTGAAGAAATTTTATTGTGGAGAGAA
TCCTTTACAACGACCACCATATGAGATTGCTAAAGAAGGGCCAGATTCCA
TCAGATCGTATTTCAGAGCTTTGGATGGTTCAGCTGCGTTGACCAGCAAA
CGATTGAAGCTTATGATCCTTGGCAATGAAAAATCAGGTTCGATTTTCTT
ATCTATTATATTTGCTCTTTACCTGTTTTCTTCTGCCTCGGGCATTCCTC
TTCTTAGGAATCTATAGAATCTCGAAAAGTTAAAATAAGAAAGTATGTTT
TAGGATCGCAGTCGAGGGCAACTCGAAGGCTCCATTTTCATATAGCTGTT
TTACCTGAAGATAGTGGCAATGTGCCTATGGTTGCCCACTCCTAATCTAT
GTCCTAAAATAATTGAGCATTAAGCAAAGATGCATCAAGAAACATTTTGT
GAATCTTTAGTAGCTGGGGTTGAACCCACAACCTCCTGCACCATATCCAA
ACGCTCCAGCTTTGTGCTGTGGTTGCTTAAAATTATAGTTTAACTAATTG
GATCTTGTGAGAATAGTTTTCAAAGCGTTCTTTTTCAAAGACAGAAGCTT
GTGCCTTGAAAATTTTAGAATTTCCAAGAAAATAATATCCCCTAAGAAGC
GACTCATATTTGTGACCAAAAATCTTCTTCCTGTTGTATTCAAATATTTA
GTCCCTTATTTTTTGGACCTACCTGGAGGTCCTATAAATTAACCTTTGTC
CGTCCGTCCGTCCGTTCGTTCGTCCGTCCGTCTGTNCTTTGTATTTATAA
TCTTATTGATACTTTGAATTTGATGTTTAGGGAAAACGACGTTAGCGAAA
GCCATTTATTCCTATGAAGAACCTGAGCCAGTTGAGGAGCGCACCATTGG
AATGGACTTCTTTGAATGGAAAGATAAGAATGGTTTGAATGTATTGATTG
TTGATTGTGCTGGTCAGAAGAAGTACATTCTTACACATCAGATATTCATG
CAAACTGGTAATCATTTATTGTTAACATTTTTAGGTTGTTTTCTCGGTTT
AGAAGTCAGTTAAGAAGCTTTATTAAAGAGATGTGTTGAAATTAGGAGCA
GTATACTTAATTGTATTTTATTTTTTCTAGGTATCCTTTTTGCTGTTGTT
TTAAATTTGAAAGATTACAATATGACGGAGGAGGCTTACAATACCATGAT
TGGAGAATGGATCGAGCTCATTTTAACATCTGTTCCCAATGCCGTCATTC
TAATTGTACCCACATTCATCGATCAATGCGGGTCTCTGGAAGAGATAAAA
CAGAAGTGTCAACACATTTTAACATTAGTGGATAAGAGGCGTCGCAAACG
ACAAGAGATCCGTATCCGTTATGAGACACGCAGCAAAGGTTCTTTCGAAC
GTGCTCACAAACTGAAACGTGATGACATACCAACGCTGCCAGCAAGTTTT
CTGTTCAGAAATAGTGTTGAAGAAGAGACCAAGGTAACCTTTTTTTTCTG
TCAGATCTTCTTGACGAAAAGAGCATAGCAACCATCTTAGTCTCAATTTC
ACAACATGGATTTTTGATATGTTCACTCGGGGTTCACTTAATCACCAAAC
TGTTACTCAATGTCGAAAATAGATAGAAAGAAACGGGATCTGATAAATCC
CCGGGTTTTCTTTTTTTAATACTTTTAACGTATGCAATTCCATTTCTAGA
TTCACCATCTTCATAAAGAACCACGTGGAGGAGAGGTATTTATGTCTTCA
AAAACACTCCTCAGGCTTGGGTTTCTTTTCTAGCAATGGTTAAAATCCTT
CTCGGCTTCGGTTCAGTTTATACAAGTCTAAACATTTTAAACAAAAAAAT
AAATAGAGATGTGTCTGATGCGAGCACTACTGAAAAAGAGTAGGATAGCT
TATTTAGTGACTTGAANATAAATAGAGATGTGTCTGATGCGAGCACTACT
GAAAAAGAGTAGGATAGCTTATTTAGTGACTTGAAAACTTATGATTTTAC
TATCTTAACCTGATTTTAAAATCATGGTTCCGGTTGAAACCCTGAAAAGT
TCCATTTTTTCGCTAGAGCATGGCTTTGAAACTAAGGTATGGTTTGAAAA
GGAGTTAAAATATTCTTAATAATAATAGAATAAACTCATTTTAGGTTTCT
TCTACTGAAGCGGTGACGTTTACTCCGTCAGCAGACAACAAATCAAAAGT
CTACCTCATCCCTGTTTCAAACAGGAAGCATCTTCATGGGTTAACGTTGC
TTNAGCCACATGGAATTATTATGATGACATTTAGCATTCCTTATGGGCAA
AAGAGACCAGATTTGATAGCAATGAGTTTGCCTCAAAAGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042999XLOC_042999Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069011-exon-scaffold_491-1575043694:459463..459676TCONS_00069011-exon-scaffold_491-1575043694:459463..459676Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1575043694:445790..447016TCONS_00069011-exon-scaffold_491-1575043694:445790..447016Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1575043694:444970..445146TCONS_00069011-exon-scaffold_491-1575043694:444970..445146Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1575043694:444494..444846TCONS_00069011-exon-scaffold_491-1575043694:444494..444846Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1575043694:444242..444277TCONS_00069011-exon-scaffold_491-1575043694:444242..444277Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1575043694:443636..443832TCONS_00069011-exon-scaffold_491-1575043694:443636..443832Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1510915933:459463..459676TCONS_00069011-exon-scaffold_491-1510915933:459463..459676Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1510915933:445790..447016TCONS_00069011-exon-scaffold_491-1510915933:445790..447016Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1510915933:444970..445146TCONS_00069011-exon-scaffold_491-1510915933:444970..445146Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1510915933:444494..444846TCONS_00069011-exon-scaffold_491-1510915933:444494..444846Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1510915933:444242..444277TCONS_00069011-exon-scaffold_491-1510915933:444242..444277Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1510915933:443636..443832TCONS_00069011-exon-scaffold_491-1510915933:443636..443832Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1491911889:459463..459676TCONS_00069011-exon-scaffold_491-1491911889:459463..459676Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1491911889:445790..447016TCONS_00069011-exon-scaffold_491-1491911889:445790..447016Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1491911889:444970..445146TCONS_00069011-exon-scaffold_491-1491911889:444970..445146Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1491911889:444494..444846TCONS_00069011-exon-scaffold_491-1491911889:444494..444846Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1491911889:444242..444277TCONS_00069011-exon-scaffold_491-1491911889:444242..444277Clytia hemisphaericaexon
TCONS_00069011-exon-scaffold_491-1491911889:443636..443832TCONS_00069011-exon-scaffold_491-1491911889:443636..443832Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_491supercontigscaffold_491:443636..459676 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.302161	0	0	0.0227377	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00069011 vs. Swiss-Prot (Human)
Match: MFHA1 (Malignant fibrous histiocytoma-amplified sequence 1 OS=Homo sapiens GN=MFHAS1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 1.068e-35
Identity = 118/417 (28.30%), Postives = 198/417 (47.48%), Query Frame = 1 
Query:  625 KIDKLSHVNVLSLSKNQFSSGDGIVYLPPSFSRLESIKELDLRGNPLKTFPEVILNLQELCTLNMADCQLEDVPXXXXXXXXXXXXXXXXXXXXXXXV-VLDFPNLEQLYLTNNKI----SDISGIQMKSLLNLDVCENFIDQIPDVLTEKCCSLKQLVMKGNSITKIPKSIKNLKALKWLDLSQNLLTKIPKDIGEVSTLQYLNLSWNDLTALPESITKLNKLKKFYCGENPLQRPPYEIAKEGPDSIRSYFRALDGSAALTSKRLKLMILGNEKSGKTTLAKAIYSYE----------------EPEPVEERTIGMDFFEWK--DKNGLNVLIVDCAGQKKYILTHQIFMQTGILFAVVLNLKDYNMTEEAYNTMIGEWIELILTSVPNAVILIVPTFIDQCGSLEEIKQKCQHI 1806
            ++  L+H+  L +S N+ +      +LP S S L  ++ LD+  N L  FP  +L L  L  L+++  +L  +P +I+ L  LK L L   ++        +  +LE L L NN +    +  S +Q   +LNL    N  ++ P  L      L++L +  N +T +P  I  L  L  L L  N +  +P  I E++ L+ L L  N +  LP+   +L+++  +   +NPL +PPYE+  +G   I +Y + L  S      RLKL+++G++ +GKT L   +                     P PV +   G++   W      GL  ++ D AG + Y +    F+  G L+ +V+NL  Y      + T +G ++  +   VP+AV+ IV T  D CG   E+++KC  I
Sbjct:  153 QLGALAHLEELDVSFNRLA------HLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLS--SNLFEEFPAALL-PLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKELAHSQPAVQPRLKLLLMGHKAAGKTLLRHCLTEERVEGCPGGGDKEKCYPPSPPPVSK---GIEVTSWTADASRGLRFIVYDLAGDESYEVIQPFFLSPGALYVLVVNLATYE--PRHFPTTVGSFLHRVGARVPHAVVCIVGTHADLCGE-RELEEKCLDI 554
The following BLAST results are available for this feature:
BLAST of TCONS_00069011 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFHA11.068e-3528.30Malignant fibrous histiocytoma-amplified sequence ... [more]
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