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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069037 ID=TCONS_00069037|Name=TCONS_00069037|organism=Clytia hemisphaerica|type=transcript|length=197bp
ATGCATCATAGCAATTTTTGTCCCTTTTGTGGTTTTGGCTGGACTCATTG
GCTGGTCTTGCATCAAAGGtCCAACTCATCAGTCCGATTTAGAGGAGGAG
GAGGAAATTGAAGCAAAGACCCCACAgaAACACCACCAGATGATGTCAAC
GCCTGCTTGCAATCCTGCGGTCTTTCGGTCCTAGAGTTTTTCCTGGT Run BLAST on NCBI transcript from alignment at scaffold_492:91797..93171- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069037 ID=TCONS_00069037|Name=TCONS_00069037|organism=Clytia hemisphaerica|type=transcript|length=1375bp|location=Sequence derived from alignment at scaffold_492:91797..93171- (Clytia hemisphaerica)
ATGCATCATAGCAATTTTTGTCCCTTTTGTGGTTTTGGCTGGACTCATTG
GCTGGTCTTGCATCAAAGGGTAGGCCTAATGATACCTTATGGAGATCAAT
TTTTGCAGATATTTATGAGGTTTTTTCAAACTCTGGAAATTTAATCCTCC
CAAAAATTAGTCTTAAATAAAATTAAAGTTATTTAAAATTCATGAATGGA
TTTTTGAATTTGTATCATTTTAAAGCACAAAAAATTTCAAGTGTTTTTNT
TTCGAACTCTGGAAATTTAATCCTCCCAAAAATGAGTGTTAATTAAATTA
AAGTTATTTAAAATTCATGAATGGATTTTTGAATTTGTATCATTTTAAAG
CACAAAAAAATTCAAGTGTTTTTTTTAACATTATCTTTTTATGCCATAAT
CCTACCTACAATTGCTATTATCATAATTTTTTTAACGTTTTCAGTCCAAC
TCATCAGTCCGATTTAGAGGAGGAGGAGGAAATTGAAGCAAAGACCCCAC
AGTAAGTGAAGATTCCGACTGCTCTTTTAACTTTTTGTTGTTATGAAATT
TTATTTTATTTTAAAGTCTTTGGAGAAAGAGTTGCCAAAACAAGTTCCCG
TTAAAGTTAATTAACATTTTGCTAAATTTTCTCGTTAAATAAAACAAAAA
ACAATAATCAGCCATTTCATTCTCCAAAAGTAATTTCTCATAAGAGCTTT
CATTATTTACAAAATGTTATAGAAGGTATTAGCAATAGCTTTTTAAAGTC
AATAACCATCATCTTTCTGATGACAGCTGTAGATTATTTAGGTTATTTTA
GTAGAATAATAAATATTTGCTTTTTAATTCATTATTCAGATCAGTGGATC
CAGTCCAGATCAAGTCAAGTTATGTTTAGATTGAGTCTAATTATGATAAT
ATATTTTTTATGTTCCTTTGTTATCTATTTTTTATAATTTTTTTTATATT
ACTGTAAAAGAAGAAGAAAGTAAAAAGGTTATAAATTGGAGCTAATTTAT
TAGCTTAGGTTAATTATCGATCCCGCATCTCCCGCACTAGGCCTTTCAGG
GATTGCTCATCCCACTTCTACAGGATATCTATGTCGTCAGCTCTTTGCTG
CCATTTTATCTATTTCGGTATCGGCTGCCGGCAATTTATCTTCAGCTAGT
CCCGCTTGCTATATCTCCTTAAATTGATCTCACTCCTATTTCCTACCTTT
TCTACTGCCTGATCAGATTGAGAATGAATTTACCTTCCACCCACCCAACA
GTTGTTTTTTTCTTATCCTCGTTGTTTGCTTTTGCTTTTATTTTCTATTT
TTAGGAAACACCACCAGATGATGTCAACGCCTGCTTGCAATCCTGCGGTC
TTTCGGTCCTAGAGTTTTTCCTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069037-exon-scaffold_492-1575043694:93103..93171 | TCONS_00069037-exon-scaffold_492-1575043694:93103..93171 | Clytia hemisphaerica | exon |
| TCONS_00069037-exon-scaffold_492-1575043694:92671..92727 | TCONS_00069037-exon-scaffold_492-1575043694:92671..92727 | Clytia hemisphaerica | exon |
| TCONS_00069037-exon-scaffold_492-1575043694:91797..91867 | TCONS_00069037-exon-scaffold_492-1575043694:91797..91867 | Clytia hemisphaerica | exon |
| TCONS_00069037-exon-scaffold_492-1510915933:93103..93171 | TCONS_00069037-exon-scaffold_492-1510915933:93103..93171 | Clytia hemisphaerica | exon |
| TCONS_00069037-exon-scaffold_492-1510915933:92671..92727 | TCONS_00069037-exon-scaffold_492-1510915933:92671..92727 | Clytia hemisphaerica | exon |
| TCONS_00069037-exon-scaffold_492-1510915933:91797..91867 | TCONS_00069037-exon-scaffold_492-1510915933:91797..91867 | Clytia hemisphaerica | exon |
| TCONS_00069037-exon-scaffold_492-1491911889:93103..93171 | TCONS_00069037-exon-scaffold_492-1491911889:93103..93171 | Clytia hemisphaerica | exon |
| TCONS_00069037-exon-scaffold_492-1491911889:92671..92727 | TCONS_00069037-exon-scaffold_492-1491911889:92671..92727 | Clytia hemisphaerica | exon |
| TCONS_00069037-exon-scaffold_492-1491911889:91797..91867 | TCONS_00069037-exon-scaffold_492-1491911889:91797..91867 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_492 | supercontig | scaffold_492:91797..93171 - |
Blast
The following BLAST results are available for this feature:
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