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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069045 ID=TCONS_00069045|Name=TCONS_00069045|organism=Clytia hemisphaerica|type=transcript|length=1027bp
ATGTTTCTCAATACTTTAGCAATAAATGACAAGAGGGTTAAATCTGCTTT
GAGAAAGAAGACTGCAACAGGAACCCCAGCCGAAGATGGTAGAGGGAGAC
ATGACAACCACAAGAAATGTGAGCAACGTGAAGAGTACGTCAAAGAACAC
ATTAAGCAATTCTTCGTCGTTGAATCTCATTATGTAAGGAAAGATTCTAA
ATACGAGTATCTCCCCTCCGAGCTAACAGTAGCAGAAATGCACCGCATGT
ACAATAACTGGCGTATTAAAAAAGGGTATCCACAAGAAAGTTACCCATTT
TATCACAGAGTCTTTCATGAATGTTTCAACCTGAAATTCCAACTTGTCAA
AAAGGACAGGTGTGACACTTGTGAGACtttcaaaaatcttgacaaCAGCT
TAAAGACAGAGCAAATCCGTGCtgaccaaaagaaaaagatacTGTTCGAG
CATTGAAAAACAGTCTAAAAGAACAAGCAAAAGATGACCCATCGCTATTG
GTAGCAGCATTTGACCTACAGAAGGTATTGCTAAGTCCATATGGTCAAAC
TGGATCGTTTTACTATTCACGTCGTTTAGCAAACCACAACTTCACCATTA
CAAATGTAGCTGACATGGAAACATTTTGCTATTTCTGGACGGAAGCAGAA
TGCCAAAAAGGGTCATACGAGGTTTCTACAAGTCTATTGCGATACATTAC
AGAGAAAAGTTCAACCGGTATTAAGAAATTCGAGTTTTTCTGTGATCGTT
GCGGTGGCCAAAACGATAACCGCATGGTCTTCATAATGCTGAGCTATGCC
TTGAGTGTCTATGACATTGATTCGATTACCCTCACCTTTCTAGTGTCGGG
ACATTCTCAAAACGAAAATGATAATGCCCATTCTGTTATCGAAAGAATGG
TATCCAAGAAAACCATTTACACCCCAGCCGAATGGGAAGCTGTAATCCAA
TGCGCCTTCAAAACCAACCGATGTGTTTTTACTGTGCTCGAGCATGGCGA
Cattattgattttaaaaaagaaagagc Run BLAST on NCBI protein sequence of TCONS_00069045-protein >TCONS_00069045-protein ID=TCONS_00069045-protein|Name=TCONS_00069045-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
MFLNTLAINDKRVKSALRKKTATGTPAEDGRGRHDNHKKCEQREEYVKEH
IKQFFVVESHYVRKDSKYEYLPSELTVAEMHRMYNNWRIKKGYPQESYPF
YHRVFHECFNLKFQLVKKDRCDTCETFKNLDNSLKTEQIRADQKKKILFE
H Run BLAST on NCBI transcript from alignment at scaffold_492:34351..35377 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069045 ID=TCONS_00069045|Name=TCONS_00069045|organism=Clytia hemisphaerica|type=transcript|length=1027bp|location=Sequence derived from alignment at scaffold_492:34351..35377 (Clytia hemisphaerica)
gctctttcttttttaaaatcaataatGTCGCCATGCTCGAGCACAGTAAA
AACACATCGGTTGGTTTTGAAGGCGCATTGGATTACAGCTTCCCATTCGG
CTGGGGTGTAAATGGTTTTCTTGGATACCATTCTTTCGATAACAGAATGG
GCATTATCATTTTCGTTTTGAGAATGTCCCGACACTAGAAAGGTGAGGGT
AATCGAATCAATGTCATAGACACTCAAGGCATAGCTCAGCATTATGAAGA
CCATGCGGTTATCGTTTTGGCCACCGCAACGATCACAGAAAAACTCGAAT
TTCTTAATACCGGTTGAACTTTTCTCTGTAATGTATCGCAATAGACTTGT
AGAAACCTCGTATGACCCTTTTTGGCATTCTGCTTCCGTCCAGAAATAGC
AAAATGTTTCCATGTCAGCTACATTTGTAATGGTGAAGTTGTGGTTTGCT
AAACGACGTGAATAGTAAAACGATCCAGTTTGACCATATGGACTTAGCAA
TACCTTCTGTAGGTCAAATGCTGCTACCAATAGCGATGGGTCATCTTTTG
CTTGTTCTTTTAGACTGTTTTTCAATGCTCGAACAgtatctttttctttt
ggtcaGCACGGATTTGCTCTGTCTTTAAGCTGttgtcaagatttttgaaa
GTCTCACAAGTGTCACACCTGTCCTTTTTGACAAGTTGGAATTTCAGGTT
GAAACATTCATGAAAGACTCTGTGATAAAATGGGTAACTTTCTTGTGGAT
ACCCTTTTTTAATACGCCAGTTATTGTACATGCGGTGCATTTCTGCTACT
GTTAGCTCGGAGGGGAGATACTCGTATTTAGAATCTTTCCTTACATAATG
AGATTCAACGACGAAGAATTGCTTAATGTGTTCTTTGACGTACTCTTCAC
GTTGCTCACATTTCTTGTGGTTGTCATGTCTCCCTCTACCATCTTCGGCT
GGGGTTCCTGTTGCAGTCTTCTTTCTCAAAGCAGATTTAACCCTCTTGTC
ATTTATTGCTAAAGTATTGAGAAACAT Coding sequence (CDS) from alignment at scaffold_492:34351..35377 >TCONS_00069045 ID=TCONS_00069045|Name=TCONS_00069045|organism=Clytia hemisphaerica|type=CDS|length=456bp|location=Sequence derived from alignment at scaffold_492:34351..35377 (Clytia hemisphaerica)
TCAATGCTCGAACAgtatctttttcttttggtcaGCACGGATTTGCTCTG
TCTTTAAGCTGttgtcaagatttttgaaaGTCTCACAAGTGTCACACCTG
TCCTTTTTGACAAGTTGGAATTTCAGGTTGAAACATTCATGAAAGACTCT
GTGATAAAATGGGTAACTTTCTTGTGGATACCCTTTTTTAATACGCCAGT
TATTGTACATGCGGTGCATTTCTGCTACTGTTAGCTCGGAGGGGAGATAC
TCGTATTTAGAATCTTTCCTTACATAATGAGATTCAACGACGAAGAATTG
CTTAATGTGTTCTTTGACGTACTCTTCACGTTGCTCACATTTCTTGTGGT
TGTCATGTCTCCCTCTACCATCTTCGGCTGGGGTTCCTGTTGCAGTCTTC
TTTCTCAAAGCAGATTTAACCCTCTTGTCATTTATTGCTAAAGTATTGAG
AAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069045-exon-scaffold_492-1491911889:34351..35377 | TCONS_00069045-exon-scaffold_492-1491911889:34351..35377 | Clytia hemisphaerica | exon |
| TCONS_00069045-exon-scaffold_492-1510915933:34351..35377 | TCONS_00069045-exon-scaffold_492-1510915933:34351..35377 | Clytia hemisphaerica | exon |
| TCONS_00069045-exon-scaffold_492-1575043694:34351..35377 | TCONS_00069045-exon-scaffold_492-1575043694:34351..35377 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_492 | supercontig | scaffold_492:34351..35377 . |
Blast
The following BLAST results are available for this feature:
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