TCONS_00069097 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069097
Unique NameTCONS_00069097
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1868

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069097 ID=TCONS_00069097|Name=TCONS_00069097|organism=Clytia hemisphaerica|type=transcript|length=1868bp
CCGGTATAAAAGTCTTAATTTGTGAAAGAAATTTCATGACATCACTTTTT
GTTGTCTTAGTAAacattaaagaaaataatttcgtACTCATATGACGTAT
GCCTGAATCTGATGGAGtaaaaaagctataaaaaaGCGTAGGCTAAGGTC
TTGACCTTACCATAGAGAGACTTTCTGTAGATAAGAAGTAGaggtttaaa
ataattttataaagtCGCTTTTCTTTGGGCAGATAATAAGCTAAATCTTA
CTTACAGAAGAAAACATTAGTTGTTGGTCATTAGAAAGAAACTTTAATCA
CTTTTCTACAAAACTGTTATTGATACCATGTATCCAAGCATGCTTTTATC
GTGTATTCTATTGGTCCTGTTAGGAACTACAGAGCTTGCACCGGCCCCAT
TGGACGACTTATCGGCCTGCGTGAACCCATTCACCAATGAAACTTACAAA
GATGGAGACAATTGGATGGAGGGAAAATGCGCACATTGTTCATGTGACCA
AGGAAAACGTTTTTGTGCTTTGGAATCCTGCAAGATTGATTGTGATCCAA
AATACTTAGTCCAAAAGGAAGACAGATGTTGTCCAATCTGTGTCCCACCA
CCACCTAAAGACTGTATCGATGAGACAACTAATACTACCCGACCACACAA
ATCTAACTGGAAGCCTGACGCATGCTCTTCATGCACGTGTGAACACGGTG
AAACCATCTGTGCAACTCAAGATTGTGCACCAGTTATGTGTAAGGACCCA
GTTACACCAGAAGGTGAATGTTGCCCACGATGCGTCACACAAGAATGTTG
GGATAGAGAGTCGAAATCATATTACAAAGAAATGGACAAATGGACAATGA
GTGACGGCTGCACATCGTGTTTCTGTTTCATGGGCAGCCCAATGTGTATG
TCACCTGGCTGTGCTCTTGAAGAATGTGACGAAGGTGTGAAACATGTCAA
AGTAAAAGGAATTTGTTGTCCAGTCTGCGAAAATAAACTCATCTGTGAAG
TAGAGGATGGTCGAAAATTCGTCGAAGGAAACCGTTGGCAAGATGATGAT
TGCAAAGTTTGCAAATGCACCAAAGACGGAATCCAATGTAATAATCCAAT
CTACGAGAAAGATCAATGCGACAGCAACTTTGTACAATTGAATCAGAAAT
GCCCAAAAGTTTGCTTGAATGcTTCGAAACTCcgtaaagaagaaaaacaa
caagaaggggaaaatgaaaaggaagaagaagaagaagctgAGGTCAATCC
GATCTATCCTTGATGATGATTATCCCCATTCCTTTTTGCTATgtataaag
tttaaaaagatataatttattagtaaatgaaaataaaaaacaatagaaaa
aataaatgatttggGTCGATGaataatttcgaaaaaaaaaacatttttaa
cagtGAAAGGAaggttttattttctaaaaaaaaataaccAACCGTCAAGT
GACAAGCAAGCTCGAGCCCAGGCCCTATCACTAACATCCATTGGTTAAAT
CCAAAAGAGGTggaagtggctctgggtacgagattgacTGACAAGCTTGT
TAAGAATAAATTCAATTGTGAATATTACAGTGTTGAAAATTCTAATATTT
CTTACGTGTGACCAACTTTTTGAATCTGATATATTTAAGTTTGAAAGATC
TTTTCcatgtttatattttatattattttatattctataacagtttttta
taaaaaagtaatatAATTTTGTACTCgaactttttttagaaaataaaccT
TTATTGTTAATAAAAGAGTTTTAATCGTCTTTTTTTTGAGACAGCACTac
taccattgagtttaaagacCGAAGGGCTAGAGAAGAATCTCTAAcatttc
ccaggcaagaaaagaTGA
Run BLAST on NCBI

protein sequence of TCONS_00069097-protein

>TCONS_00069097-protein ID=TCONS_00069097-protein|Name=TCONS_00069097-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MYPSMLLSCILLVLLGTTELAPAPLDDLSACVNPFTNETYKDGDNWMEGK
CAHCSCDQGKRFCALESCKIDCDPKYLVQKEDRCCPICVPPPPKDCIDET
TNTTRPHKSNWKPDACSSCTCEHGETICATQDCAPVMCKDPVTPEGECCP
RCVTQECWDRESKSYYKEMDKWTMSDGCTSCFCFMGSPMCMSPGCALEEC
DEGVKHVKVKGICCPVCENKLICEVEDGRKFVEGNRWQDDDCKVCKCTKD
GIQCNNPIYEKDQCDSNFVQLNQKCPKVCLNASKLRKEEKQQEGENEKEE
EEEAEVNPIYP
Run BLAST on NCBI

transcript from alignment at scaffold_493:406474..410097+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069097 ID=TCONS_00069097|Name=TCONS_00069097|organism=Clytia hemisphaerica|type=transcript|length=3624bp|location=Sequence derived from alignment at scaffold_493:406474..410097+ (Clytia hemisphaerica)
CCGGTATAAAAGTCTTAATTTGTGAAAGAAATTTCATGACATCACTTTTT
GTTGTCTTAGTAAacattaaagaaaataatttcgtACTCATATGACGTAT
GCCTGAATCTGATGGAGtaaaaaagctataaaaaaGCGTAGGCTAAGGTC
TTGACCTTACCATAGAGAGACTTTCTGTAGATAAGAAGTAGaggtttaaa
ataattttataaagtCGCTTTTCTTTGGGCAGATAATAAGCTAAATCTTA
CTTACAGAAGAAAACATTAGTTGTTGGTCATTAGAAAGAAACTTTAATCA
CTTTTCTACAAAACTGTTATTGATACCATGTATCCAAGCATGCTTTTATC
GTGTATTCTATTGGTCCTGTTAGGAACTACAGAGCTTGCACCGGCCCCAT
TGGACGACTTATCGGCCTGCGTGAACCCATTCACCAATGAAACTTACAAA
GATGGAGACAATTGGATGGAGGGAAAATGCGCACATTGTTCATGTGACCA
AGGAAAACGTTTTTGTGCTTTGGAATCCTGCAAGATTGATTGTGATCCAA
AATACTTAGTCCAAAAGGAAGACAGATGTTGTCCAATCTGTGTCCCACCA
CCACCTAAAGACTGTATCGATGAGACAACTAATACTACCCGACCACACAA
ATCTAACTGGAAGCCTGACGCATGCTCTTCATGCACGTGTGAACACGGTG
AAACCATCTGTGCAACTCAAGATTGTGCACCAGTTATGTGTAAGGACCCA
GTTACACCAGAAGGTGAATGTTGCCCACGATGCGTCACACAAGAATGTTG
GGATAGAGAGTCGAAATCATATTACAAAGAAAGTAAGTTTTCTTGCTTCT
TTACTCACCGGAGACTTCTTATATTTCAACTTTCACAGCCCTGGACATTC
TACTATCTATTGAGTATCCAtgattcacaaaaaaaaaaaaattcaaattc
agatAGTTGATACTACTTCATTCTAATCAATAAAGCCAAAAAGTCGCAAG
ATctttggatttcttttttgaaaaaagcgtttagaaactttgtatgtatG
TAAGTCCACGAGAATGCAAAAaggaaactttaaaaaatgctgAACATTCA
AATCTTAAGCATCTTACATTTGTCATTCCACTTGCATCAATAATCTAAAC
ATAAGCGGAACTTTCATCATCTTCTTAAATTCTACTCGATTTCTTTCCAC
AGTGGACAAATGGACAATGAGTGACGGCTGCACATCGTGTTTCTGTTTCA
TGGGCAGCCCAATGTGTATGTCACCTGGCTGTGCTCTTGAAGAATGTGAC
GAAGGTGTGAAACATGTCAAAGTAAAAGGAATTTGTTGTCCAGTCTGCGA
AAATAAACTCATCTGTGAAGTAGAGGATGGTCGAAAATTCGTCGAAGGTG
AGACATGTATTTTGTAAGACTTGAGACACAACCATTTCTCACATTTTTGG
GGACTCCTTTCTAACTGATATAATGTCTCGAAATTTTTCCTGTGATATCA
ATTCGCTGGGATGTGATCCTCGCAGTTATACTGCAAAGCAAAGAAGTTTC
ATTTACACTAGATTTCTAAGTTGTAAACAATATAGATTAGAAATCCCCAC
GTATCAAAACCAGGTATTTCCATATCCATTAACTTGGCTACAACTTCAAC
CGCAGTGTCCAAAGAAATGTTACTGGGGTGCATCGAGACAGGAGTGTTTC
AAGATCTTTTTCgccaaataattttcaaaatacaagCCAATCACTTAACA
ATTGAGCCAAATTGGACATAACcttcaataaaaatttgattacagAACGA
GCATATTGATTCGTTTTCTAAATAAGATAATTATTTATATATGACAATCG
ATTGAGTTCTATGTCGTCAATCAGGTGTGATATTTAATCAATCTCGGGTC
CAAATACTAAGTCCATTTTTCAGAGAGAAACATAGGTCCTTTGTGGGTCT
TATTTCGCCGGACagttttctctttcttttcttttaatttctggAAAACT
TATAATTGGacataattttaatttcttctttaaaattctACATAGGAAAC
CGTTGGCAAGATGATGATTGCAAAGTTTGCAAATGCACCAAAGACGGAAT
CCAATGTAATAATCCAATCTACGAGAAAGATCAATGCGACAGCAACTTTG
TACAATTGAATCAGAAATGCCCAAAAGTTTGCTTGAATGGTAAGGCGTTT
TAAAATCTATAATCTTTTGCCACACCCTCTTCTAATAGACCCGATAGAAT
TTTTTCAGTAGCTTGTGGGGGTAATAATAATGGTCTGAAGCTGGATGGAt
gttgatattcccatgtttttcgTGGCTGGGGGTTGGAATTTTACTGCTTT
gaagccagaaaattcagtgaggatggaaaaaatagctcCATATTTTACCT
CAAAGATTTGTTTACATTCGATTATTTTCATCGGGGACGAAAATTGGACT
ATAATTTTCAACTGGGAACGatatttttgctaatttttccagtgggtcgg
GGTTCCAACGGGCCCGAGAAGGAGGTGACCATCATATCAGTTCATCCATG
TAGCCAGCTCttgtattgttttgaaaaaagtctgAAGACTGTGATAGATA
GTTTAACCAGACCTGATTACTGTGagaatttttaatcaaaagacaaTATT
TTTTGTCCGTCAATCATAATTTTGTCATAAAATGTCTTTGTCTAAATTTA
AACCGTATTGCTTCGAGTAAACGCCCCTTCCTGTTGGGACTTCTTCCAAA
CTGATAAAATATGTCTGAATATCCTTCCTTTGATATCAATACCAATACAG
TCACCTTAGTAATATCAATACCCTAGAGGAAATCATTTCAATGAACGCTC
CCCCTCTTCAAATAAACGCGCCCCATCAAGGCGTCTGATGATTAATGTAA
ATGTTTTctatttcatttaatttttagcTTCGAAACTCcgtaaagaagaa
aaacaacaagaaggggaaaatgaaaaggaagaagaagaagaagctgAGGT
CAATCCGATCTATCCTTGATGATGATTATCCCCATTCCTTTTTGCTATgt
ataaagtttaaaaagatataatttattagtaaatgaaaataaaaaacaat
agaaaaaataaatgatttggGTCGATGaataatttcgaaaaaaaaaacat
ttttaacagtGAAAGGAaggttttattttctaaaaaaaaataaccAACCG
TCAAGTGACAAGCAAGCTCGAGCCCAGGCCCTATCACTAACATCCATTGG
TTAAATCCAAAAGAGGTggaagtggctctgggtacgagattgacTGACAA
GCTTGTTAAGAATAAATTCAATTGTGAATATTACAGTGTTGAAAATTCTA
ATATTTCTTACGTGTGACCAACTTTTTGAATCTGATATATTTAAGTTTGA
AAGATCTTTTCcatgtttatattttatattattttatattctataacagt
tttttataaaaaagtaatatAATTTTGTACTCgaactttttttagaaaat
aaaccTTTATTGTTAATAAAAGAGTTTTAATCGTCTTTTTTTTGAGACAG
CACTactaccattgagtttaaagacCGAAGGGCTAGAGAAGAATCTCTAA
catttcccaggcaagaaaagaTGA

Coding sequence (CDS) from alignment at scaffold_493:406474..410097+

>TCONS_00069097 ID=TCONS_00069097|Name=TCONS_00069097|organism=Clytia hemisphaerica|type=CDS|length=3744bp|location=Sequence derived from alignment at scaffold_493:406474..410097+ (Clytia hemisphaerica)
ATGTATCCAAGCATGCTTTTATCGTGTATTCTATTGGTCCTGTTAGGAAC
TACAGAGCTTGCACCGGCCCCATTGGACGACTTATCGGCCTGCGTGAACC
CATTCACCAATGAAACTTACAAAGATGGAGACAATTGGATGGAGGGAAAA
TGCGCACATTGTTCATGTGACCAAGGAAAACGTTTTTGTGCTTTGGAATC
CTGCAAGATTGATTGTGATCCAAAATACTTAGTCCAAAAGGAAGACAGAT
GTTGTCCAATCTGTGTCCCACCACCACCTAAAGACTGTATCGATGAGACA
ACTAATACTACCCGACCACACAAATCTAACTGGAAGCCTGACGCATGCTC
TTCATGCACGTGTGAACACGGTGAAACCATCTGTGCAACTCAAGATTGTG
CACCAGTTATGTGTAAGGACCCAGTTACACCAGAAGGTGAATGTTGCCCA
CGATGCGTCACACAAGAATGTTGGGATAGAGAGTCGAAATCATATTACAA
AGAAATGGACAAATGGACAATGAGTGACGGCTGCACATCGTGTTTCTGTT
TCATGGGCAGCCCAATGTGTATGTCACCTGGCTGTGCTCTTGAAGAATGT
GACGAAGGTGTGAAACATGTCAAAGTAAAAGGAATTTGTTGTCCAGTCTG
CGAAAATAAACTCATCTGTGAAGTAGAGGATGGTCGAAAATTCGTCGAAG
GAAACCGTTGGCAAGATGATGATTGCAAAGTTTGCAAATGCACCAAAGAC
GGAATCCAATGTAATAATCCAATCTACGAGAAAGATCAATGCGACAGCAA
CTTTGTACAATTGAATCAGAAATGCCCAAAAGTTTGCTTGAATGcTTCGA
AACTCcgtaaagaagaaaaacaacaagaaggggaaaatgaaaaggaagaa
gaagaagaagctgAGGTCAATCCGATCTATCCTTGAATGTATCCAAGCAT
GCTTTTATCGTGTATTCTATTGGTCCTGTTAGGAACTACAGAGCTTGCAC
CGGCCCCATTGGACGACTTATCGGCCTGCGTGAACCCATTCACCAATGAA
ACTTACAAAGATGGAGACAATTGGATGGAGGGAAAATGCGCACATTGTTC
ATGTGACCAAGGAAAACGTTTTTGTGCTTTGGAATCCTGCAAGATTGATT
GTGATCCAAAATACTTAGTCCAAAAGGAAGACAGATGTTGTCCAATCTGT
GTCCCACCACCACCTAAAGACTGTATCGATGAGACAACTAATACTACCCG
ACCACACAAATCTAACTGGAAGCCTGACGCATGCTCTTCATGCACGTGTG
AACACGGTGAAACCATCTGTGCAACTCAAGATTGTGCACCAGTTATGTGT
AAGGACCCAGTTACACCAGAAGGTGAATGTTGCCCACGATGCGTCACACA
AGAATGTTGGGATAGAGAGTCGAAATCATATTACAAAGAAATGGACAAAT
GGACAATGAGTGACGGCTGCACATCGTGTTTCTGTTTCATGGGCAGCCCA
ATGTGTATGTCACCTGGCTGTGCTCTTGAAGAATGTGACGAAGGTGTGAA
ACATGTCAAAGTAAAAGGAATTTGTTGTCCAGTCTGCGAAAATAAACTCA
TCTGTGAAGTAGAGGATGGTCGAAAATTCGTCGAAGGAAACCGTTGGCAA
GATGATGATTGCAAAGTTTGCAAATGCACCAAAGACGGAATCCAATGTAA
TAATCCAATCTACGAGAAAGATCAATGCGACAGCAACTTTGTACAATTGA
ATCAGAAATGCCCAAAAGTTTGCTTGAATGcTTCGAAACTCcgtaaagaa
gaaaaacaacaagaaggggaaaatgaaaaggaagaagaagaagaagctgA
GGTCAATCCGATCTATCCTTGAATGTATCCAAGCATGCTTTTATCGTGTA
TTCTATTGGTCCTGTTAGGAACTACAGAGCTTGCACCGGCCCCATTGGAC
GACTTATCGGCCTGCGTGAACCCATTCACCAATGAAACTTACAAAGATGG
AGACAATTGGATGGAGGGAAAATGCGCACATTGTTCATGTGACCAAGGAA
AACGTTTTTGTGCTTTGGAATCCTGCAAGATTGATTGTGATCCAAAATAC
TTAGTCCAAAAGGAAGACAGATGTTGTCCAATCTGTGTCCCACCACCACC
TAAAGACTGTATCGATGAGACAACTAATACTACCCGACCACACAAATCTA
ACTGGAAGCCTGACGCATGCTCTTCATGCACGTGTGAACACGGTGAAACC
ATCTGTGCAACTCAAGATTGTGCACCAGTTATGTGTAAGGACCCAGTTAC
ACCAGAAGGTGAATGTTGCCCACGATGCGTCACACAAGAATGTTGGGATA
GAGAGTCGAAATCATATTACAAAGAAATGGACAAATGGACAATGAGTGAC
GGCTGCACATCGTGTTTCTGTTTCATGGGCAGCCCAATGTGTATGTCACC
TGGCTGTGCTCTTGAAGAATGTGACGAAGGTGTGAAACATGTCAAAGTAA
AAGGAATTTGTTGTCCAGTCTGCGAAAATAAACTCATCTGTGAAGTAGAG
GATGGTCGAAAATTCGTCGAAGGAAACCGTTGGCAAGATGATGATTGCAA
AGTTTGCAAATGCACCAAAGACGGAATCCAATGTAATAATCCAATCTACG
AGAAAGATCAATGCGACAGCAACTTTGTACAATTGAATCAGAAATGCCCA
AAAGTTTGCTTGAATGcTTCGAAACTCcgtaaagaagaaaaacaacaaga
aggggaaaatgaaaaggaagaagaagaagaagctgAGGTCAATCCGATCT
ATCCTTGAATGTATCCAAGCATGCTTTTATCGTGTATTCTATTGGTCCTG
TTAGGAACTACAGAGCTTGCACCGGCCCCATTGGACGACTTATCGGCCTG
CGTGAACCCATTCACCAATGAAACTTACAAAGATGGAGACAATTGGATGG
AGGGAAAATGCGCACATTGTTCATGTGACCAAGGAAAACGTTTTTGTGCT
TTGGAATCCTGCAAGATTGATTGTGATCCAAAATACTTAGTCCAAAAGGA
AGACAGATGTTGTCCAATCTGTGTCCCACCACCACCTAAAGACTGTATCG
ATGAGACAACTAATACTACCCGACCACACAAATCTAACTGGAAGCCTGAC
GCATGCTCTTCATGCACGTGTGAACACGGTGAAACCATCTGTGCAACTCA
AGATTGTGCACCAGTTATGTGTAAGGACCCAGTTACACCAGAAGGTGAAT
GTTGCCCACGATGCGTCACACAAGAATGTTGGGATAGAGAGTCGAAATCA
TATTACAAAGAAATGGACAAATGGACAATGAGTGACGGCTGCACATCGTG
TTTCTGTTTCATGGGCAGCCCAATGTGTATGTCACCTGGCTGTGCTCTTG
AAGAATGTGACGAAGGTGTGAAACATGTCAAAGTAAAAGGAATTTGTTGT
CCAGTCTGCGAAAATAAACTCATCTGTGAAGTAGAGGATGGTCGAAAATT
CGTCGAAGGAAACCGTTGGCAAGATGATGATTGCAAAGTTTGCAAATGCA
CCAAAGACGGAATCCAATGTAATAATCCAATCTACGAGAAAGATCAATGC
GACAGCAACTTTGTACAATTGAATCAGAAATGCCCAAAAGTTTGCTTGAA
TGcTTCGAAACTCcgtaaagaagaaaaacaacaagaaggggaaaatgaaa
aggaagaagaagaagaagctgAGGTCAATCCGATCTATCCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043056XLOC_043056Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069097-exon-scaffold_493-1491911889:406474..407305TCONS_00069097-exon-scaffold_493-1491911889:406474..407305Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1510915933:406474..407305TCONS_00069097-exon-scaffold_493-1510915933:406474..407305Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1575043694:406474..407305TCONS_00069097-exon-scaffold_493-1575043694:406474..407305Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1491911889:407676..407870TCONS_00069097-exon-scaffold_493-1491911889:407676..407870Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1510915933:407676..407870TCONS_00069097-exon-scaffold_493-1510915933:407676..407870Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1575043694:407676..407870TCONS_00069097-exon-scaffold_493-1575043694:407676..407870Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1491911889:408519..408662TCONS_00069097-exon-scaffold_493-1491911889:408519..408662Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1510915933:408519..408662TCONS_00069097-exon-scaffold_493-1510915933:408519..408662Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1575043694:408519..408662TCONS_00069097-exon-scaffold_493-1575043694:408519..408662Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1491911889:409401..410097TCONS_00069097-exon-scaffold_493-1491911889:409401..410097Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1510915933:409401..410097TCONS_00069097-exon-scaffold_493-1510915933:409401..410097Clytia hemisphaericaexon
TCONS_00069097-exon-scaffold_493-1575043694:409401..410097TCONS_00069097-exon-scaffold_493-1575043694:409401..410097Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069097-proteinTCONS_00069097-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_493supercontigscaffold_493:406474..410097 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.60187	9.53017	4.74579	4.73777	34.6067	33.4085	44.2925	54.4903	41.1594	63.7058	88.4185	67.9643	152.849	162.797	83.2168	66.7079	81.3439	137.23	250.651	415.365	329.207	336.773	261.281	349.827	495.067	416.508	66.2116	77.4849	1112.9	1128.5
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001007VWF_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00069097 vs. Swiss-Prot (Human)
Match: CRIM1 (Cysteine-rich motor neuron 1 protein OS=Homo sapiens GN=CRIM1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.430e-17
Identity = 58/204 (28.43%), Postives = 89/204 (43.63%), Query Frame = 1 
Query:  436 NETYKDGDNWMEGKCAHCSCDQGKRFCALESCKIDCDPKYLVQK----EDRCCPICVPPPPKDCIDETTNTTRPHKSN----------WKPDACSSCTCEHGETICATQDCAPVMCKDPVTPEGECCPRCVTQECWDRE----SKSYYKEMDKWTMSDGCTSCFCFMGSPMCMSPGCALEECDEGVKHVKVKGICCPVCENKLI 993
             E + +G+ W    C  C+C  G+  C  E C     P  L Q     +D CCP C   P +  +    +     K++          WKPD C+SC C      C ++ C  V C+ PV  +G+CCP C+      +     S   Y + ++W + D CT C+C  G  +C +  C    C   V+ + V+G CCP+C    +
Sbjct:  684 GEYFVEGETWNIDSCTQCTCHSGRVLCETEVC-----PPLLCQNPSRTQDSCCPQCTDQPFRPSLSRNNSVPNYCKNDEGDIFLAAESWKPDVCTSCICIDSVISCFSESCPSVSCERPVLRKGQCCPYCIEDTIPKKVVCHFSGKAYADEERWDL-DSCTHCYCLQGQTLCSTVSCPPLPC---VEPINVEGSCCPMCPEMYV 878
The following BLAST results are available for this feature:
BLAST of TCONS_00069097 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CRIM18.430e-1728.43Cysteine-rich motor neuron 1 protein OS=Homo sapie... [more]
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