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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069129 ID=TCONS_00069129|Name=TCONS_00069129|organism=Clytia hemisphaerica|type=transcript|length=949bp
CCGGAATGATCTTTTTATAAATATCTCGTATCGGATTTATTACTATAAGG
TCTGTAAATTCTTAACgcgcttttttgattttttccggtctgtaatttgt
actAAAGTAAAATAATTTCTAGCGCGAAAGTTCTCTGGATTAAACAGACT
GCTGTTAAACTCGTCTCAAGTCAAGTGTGCTGTTCTTGTCaaatttgttt
aaatttttgccattgtatctatatttgaatatttatcCGTTGCTGACTCT
GACTGGAAATTGGACACTCCTAACCGCTTCATCCCCTGAttgtaaattga
ttttcaaaGTTGCTGACCCTGACTCGAAATTGGACACTCCTAACCGCTCT
ATCCCCTGACTAttgtaaattgattttcaaaagttttgaatggattttta
agattttaaatcaTGGAAGAAGATGTTCCACTATTTTATGTTGGTAAAAG
TTCAACTCGTTTTCCGAATTGGAAATAGACCTTGAAAAGTACAAACAAAG
TCATCATGTAGAGATGTACATTAGAAACTCAAGGACAGTTGAAAGTTCTG
CAAACCGTGTGACTAAATCATTAAATCGGCAGTTGAAATATTATGAGGTG
AAGTATGGATGTGTTCATGGTAGAAGAGAATTTGTCGCCCGTGGTGCTGA
TAAAAGAAAAAGGCAGTAAGTACTGTAGTCTTCATATGCTTAAAGATACG
GTGACGGTGCAGCAGCAAGAGCCTTAAAAGAAAGGGATGTTTATTAAACA
TATAATAGCAATTGTATAtttacagtattcttaggttccaaataaatgag
ggggatggaaaattttcgacattttaatAAACAAAGGGCTcttaattgcc
ggggggttggaaattcttcttctgaaaacccaaaatataaaatataggct
aaaatcaggctatttagagcaaaataaggggtcttctctttgacagctg Run BLAST on NCBI transcript from alignment at scaffold_493:410586..411534 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069129 ID=TCONS_00069129|Name=TCONS_00069129|organism=Clytia hemisphaerica|type=transcript|length=949bp|location=Sequence derived from alignment at scaffold_493:410586..411534 (Clytia hemisphaerica)
cagctgtcaaagagaagaccccttattttgctctaaatagcctgatttta
gcctatattttatattttgggttttcagaagaagaatttccaaccccccg
gcaattaagAGCCCTTTGTTTattaaaatgtcgaaaattttccatccccc
tcatttatttggaacctaagaatactgtaaaTATACAATTGCTATTATAT
GTTTAATAAACATCCCTTTCTTTTAAGGCTCTTGCTGCTGCACCGTCACC
GTATCTTTAAGCATATGAAGACTACAGTACTTACTGCCTTTTTCTTTTAT
CAGCACCACGGGCGACAAATTCTCTTCTACCATGAACACATCCATACTTC
ACCTCATAATATTTCAACTGCCGATTTAATGATTTAGTCACACGGTTTGC
AGAACTTTCAACTGTCCTTGAGTTTCTAATGTACATCTCTACATGATGAC
TTTGTTTGTACTTTTCAAGGTCTATTTCCAATTCGGAAAACGAGTTGAAC
TTTTACCAACATAAAATAGTGGAACATCTTCTTCCAtgatttaaaatctt
aaaaatccattcaaaacttttgaaaatcaatttacaaTAGTCAGGGGATA
GAGCGGTTAGGAGTGTCCAATTTCGAGTCAGGGTCAGCAACtttgaaaat
caatttacaaTCAGGGGATGAAGCGGTTAGGAGTGTCCAATTTCCAGTCA
GAGTCAGCAACGgataaatattcaaatatagatacaatggcaaaaattta
aacaaatttGACAAGAACAGCACACTTGACTTGAGACGAGTTTAACAGCA
GTCTGTTTAATCCAGAGAACTTTCGCGCTAGAAATTATTTTACTTTagta
caaattacagaccggaaaaaatcaaaaaagcgcGTTAAGAATTTACAGAC
CTTATAGTAATAAATCCGATACGAGATATTTATAAAAAGATCATTCCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069129-exon-scaffold_493-1491911889:410586..411534 | TCONS_00069129-exon-scaffold_493-1491911889:410586..411534 | Clytia hemisphaerica | exon |
| TCONS_00069129-exon-scaffold_493-1510915933:410586..411534 | TCONS_00069129-exon-scaffold_493-1510915933:410586..411534 | Clytia hemisphaerica | exon |
| TCONS_00069129-exon-scaffold_493-1575043694:410586..411534 | TCONS_00069129-exon-scaffold_493-1575043694:410586..411534 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_493 | supercontig | scaffold_493:410586..411534 . |
Blast
The following BLAST results are available for this feature:
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