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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069203 ID=TCONS_00069203|Name=TCONS_00069203|organism=Clytia hemisphaerica|type=transcript|length=227bp
ACTTCTGTCCAATCACAATCAACCTCGATCACAAGTTTAGCACCTTCAAG
CTCGGGATTTTCTGAGcttccaaaatctttgattacACAAACCGTTGAAA
GCTTTACGACGTCGGTAGTGGAAACATCTTCAGGAGTTGTCTTCACGCCT
TCCTCAGGAACAACATCACGCCCACCATTCccTCCATTTACTATCCCAAT
ACCATCGTCAAGTACTTCATTTGCCTC Run BLAST on NCBI transcript from alignment at scaffold_496:629040..630137+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069203 ID=TCONS_00069203|Name=TCONS_00069203|organism=Clytia hemisphaerica|type=transcript|length=1098bp|location=Sequence derived from alignment at scaffold_496:629040..630137+ (Clytia hemisphaerica)
ACTTCTGTCCAATCACAATCAACCTCGATCACAAGTTTAGCACCTTCAAG
CTCGGTAGGTGTTCTTTGAACATTGGTTTAGAGGAAAATGCTCTTACTAT
TgtttttagtttattttcaTAAGACAGACACAAATAATTAATATGAAAAA
GAACTTTAAGTCAATTAGGCAATGACTTAATATTATAAAATCCACTGGCG
AGGGGTAGGGTCTTTTTCTTTCAAGTTTGTTAGCAAAAACGTTGTTTTTC
AAATACTATTTGCCTCAAGTGCCATGATTGCTTTTAAACGAAGGAAAGGT
GTTCCGAAATTTGGTCTTCTAAATTACAATAATAATTACTTTTTTCTACC
AGGGATTTTCTGAGcttccaaaatctttgattacACAAACCGTTGAAAGC
TTTACGACGTCGGTAGTGGAAACATCTTCAGGAGTTGTCTTCACGCCTTC
CTCAGGAACAACATCACGCCCACCATTCGTAAGTAGTGCTTATAAAGttt
ccattgaatatttcttTCATGAAACTATATATCTAAGTACTTTCAACAGG
GATACGTATCCCACCAGTCCCTTCTAACATTTCCAATCATGTTTATTAGT
AGACTAGAAAATACAACCGTAGCAAAGCCTTCTTATCAGAATTTAGTTTT
GAGGCTAATGGTAATACTTATCTATGCACTTGAAATCTTCGACCCAATAA
TAGTCTTTGATTTCatatgaatttcatttttctaaagttttaaaattgct
tCTGCCATACAAAGCCGAAATTTCTACgataaatgaaattttgatctaga
aaatTATTAAGTTTGTAATCAAAGATTTTCTGCTAAAATTGCACAATGTT
TTAGCATCCTAGCTTATCTTGCATGcctaatttttatcaaaatctacATA
TAGATGTTATTACACAAACAAAGCATTAAATTTGCctccaaaataagaaa
atcaccTTTTTAAATAAGCTAACAAATCAACAAGGAATTGTTTGACCTAC
TTTTAGAAGGAATGGTTattaaaaattgagtaaaaatttttttctttata
gccTCCATTTACTATCCCAATACCATCGTCAAGTACTTCATTTGCCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069203-exon-scaffold_496-1491911889:629040..629093 | TCONS_00069203-exon-scaffold_496-1491911889:629040..629093 | Clytia hemisphaerica | exon |
| TCONS_00069203-exon-scaffold_496-1510915933:629040..629093 | TCONS_00069203-exon-scaffold_496-1510915933:629040..629093 | Clytia hemisphaerica | exon |
| TCONS_00069203-exon-scaffold_496-1575043694:629040..629093 | TCONS_00069203-exon-scaffold_496-1575043694:629040..629093 | Clytia hemisphaerica | exon |
| TCONS_00069203-exon-scaffold_496-1491911889:629392..629517 | TCONS_00069203-exon-scaffold_496-1491911889:629392..629517 | Clytia hemisphaerica | exon |
| TCONS_00069203-exon-scaffold_496-1510915933:629392..629517 | TCONS_00069203-exon-scaffold_496-1510915933:629392..629517 | Clytia hemisphaerica | exon |
| TCONS_00069203-exon-scaffold_496-1575043694:629392..629517 | TCONS_00069203-exon-scaffold_496-1575043694:629392..629517 | Clytia hemisphaerica | exon |
| TCONS_00069203-exon-scaffold_496-1491911889:630091..630137 | TCONS_00069203-exon-scaffold_496-1491911889:630091..630137 | Clytia hemisphaerica | exon |
| TCONS_00069203-exon-scaffold_496-1510915933:630091..630137 | TCONS_00069203-exon-scaffold_496-1510915933:630091..630137 | Clytia hemisphaerica | exon |
| TCONS_00069203-exon-scaffold_496-1575043694:630091..630137 | TCONS_00069203-exon-scaffold_496-1575043694:630091..630137 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:629040..630137 + |
Blast
The following BLAST results are available for this feature:
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