TCONS_00069261 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069261
Unique NameTCONS_00069261
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2352

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069261 ID=TCONS_00069261|Name=TCONS_00069261|organism=Clytia hemisphaerica|type=transcript|length=2352bp
ATTGGTCATGAGATGGGAAATGCTAACGACAACATAAGAGACGACATGGT
TGAATCGTGCGACGCTACCAATAAAGCATGTAATACCATCGTCTCCATGC
TGAACACAGATGAAAATAACAACGCACAAGAACCAACCAGTGAGAAGACG
TTGTCAGACGCAGCAAAGATTCTTCTATCGGCAATCACCAAGATTCTGAT
ACTGGCTGATCGAACGGCTATATTAAAGCTGGTCAAATCTGCAGCTAAGG
TGAACGCCCGTTTAGAAGAATTAGAAAGTGTGACGAATTTCACGGAATTC
GTCAACGCGTTCAGTCAATTTGGTGGTGATATGGTTGAACTGGCCTATGT
CTCTGGTGAAAGACAAAATGACTTACGTGATGAATTACAAAGGGCAGAAG
TTTGTGCAGCGAGAGCCATTCTTGAGAAGTCAACCATGATGTTACTCACA
ACTTGCAAGACTTGTTTACGTCATCCCGATTCACCGTTAGCGAAAGGAAT
ACGTGGGGCTGTCTTCCAAAGCATGCGAGACGCAATGACGACGTTGAAAG
CTGTTATTGAAAACAATGAATGTCCTGGGAAAGCTTTCTGTTGTGGAATT
TCACTGGATTTGAATAATACAAAGGAAGGTATAGAAGATTTATTGAAAAA
CCCCAAAGATTACCAGAAGATGGAAAACCTAATAGACACGGTGGACAATA
TTAATATCGACATGGAAGATCTTattaacaaagaaaatattgaagattCA
AGAAAATCATTACTAAAAGCTTTGATAATGCAATCGAAAGGTCTTCATAA
AAACCTGTTGGAATTTGTGGAAGATGACCAGGTGACTGAAGACGAAGAGA
ACATATATAAAACGTTGAGAGAACTTTCCGATATTTGCGATGAAATGCTG
GAAGAGTCCAGCAAAGCGAGTGCAGAGCAAGTGTTTCATCTGGTAGAAAC
ATGTGAATATAAAGAAGTTTTAGCACGTCTGAAAGAATCGGCGCTCTCCG
GTGAACTTGATAAAGTCGAAGAAACTGCAGAACGATTGGAAAGTGTGCTT
AGTGAAATTTTACAGGTTACCCGGCTGACAAAAGCCACGAGCAATATAGA
TGCTTGTATAATCACAGCAACAAGATTAGAAGAAAATTTGATCAATCTGA
TGCCACAGGCCATTGATGCAGGAAAAATGTTATCAGCACATCCAACAAGT
AAAATTactcaagaaaattttgaagtctTTATTGATGTATGGGATACGCA
GGTTGACGAATTACTTACATTACTGAGGAATATCACCGAAGGTCACACGG
AGAATAATGAATGGCTTACAATATATATACCAATGGCATCCAAAATAAAT
TCATAATATCTACTTGTTGTTTGTTGATGTAAAATTGCACGAGTTGAATT
TTTTGCAACTCGCAATGACTGACGGTAAATGGCGTTTGATGTAAATGTAT
TTTTACCATTATTTGAAAACTACAAAAGTTCTTTGTAAAATAGATaggaa
agtcaaaaaaagttgaaaaaagtaTTAGACTATCTTTGGGAAAACTTGGA
ATCAATTTATGAAAACATGGAAACAATCTGTTTTACTGAAAAGTGGACTA
ACTAAATGAAATCTAGTTATGCAGCCACCAAAGCACATCAGTGTGAAAAC
GTTCCAAATCATATCTTTGTGCCTTTTTTAATCTCCAAGTTAGGCTATTA
AGATTATATCTTATTTGCATTTCCttagttcaatttttcttagaatttat
tttggaaACACACTGTAAATATTGCAATTTTTGAGCATTAAATTTCACCA
GTATTTCCTTACTTAAAGGGATTGAATTTTAAAAGTACTACACTTCTGta
cgaaattttaaaatatggcGCCTTTTgagataattttcaataaaagtttA
CATGTTACTTACCAAAGATTTCCggtattttgatgaaatttaacgAAGTT
TTATAATTTCATCACCGCAAAAGctgatttattttgaatttaatgcaAAG
TAAAACAtacaacatttgaaagaaataattcaagtttgttttttctttcc
tgtcataatttcaagtcaaaattttATCTAGGAAAgtttatattcaaatt
ttgagcaaatttttgGAAGCGTAAATTTTGTGGCCCATGTGAGCATTTGG
CGTCAAAGAACTAGATTTCGAATACGTAGAATTCTGAATACCTTTGTAAG
TAtagttttaaaatctttatttaataattaatttttcttcattaatGGAT
GACTCTTTAAAGATGTAAATAGCATTTTATTTATGAGATGGTCATGTTTT
GTTATTTAGCTTTTGTGTTTCGaacttgaagaaaatgaaaattgaaaatt
aa
Run BLAST on NCBI

transcript from alignment at scaffold_496:505753..512996-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069261 ID=TCONS_00069261|Name=TCONS_00069261|organism=Clytia hemisphaerica|type=transcript|length=7244bp|location=Sequence derived from alignment at scaffold_496:505753..512996- (Clytia hemisphaerica)
ATTGGTCATGAGATGGGAAATGCTAACGACAACATAAGAGGTAATAGAGT CTATCCTTGTCTTACAAGATATCAATAGTCGCAAAAACGTCCATATTTTT ATAGAAAGTATTATGTATGGCACTTTATTTCAAAAGATTTTTACTATGAG GCTTAAGGATTAAATTCAAGCATGTTTTGTAAAACTTTGCATCTGACAAG GTCCATTTTATTCGATCCACACGGTACGTCACTGTTGATTGTAAATTTAG TTCGCCCTTATAAACACTCGAACAGGTCACGGTTTGATTATCATTAGGTC CTTGTGTGCTATATTCTAAGACAAATCACTATCTAAAAATAAGCGAAAAG CTAAAGAAACGGTTTCTCAAACGGTTTTTTTACGGACGAAAGTTTACATG TTTGACAGTCTTTTGTTTAATTCAACACTTGCCGCCACTATTTTTCGCCA AACGGTTGTTAAACTCCACGCGCACATATTTCCCACTTTTACTATCCCTT TATTTAACAGACGATAGTATCGTCTATTATTATCTTCTATTTCATACTTT CACAGACGACATGGTTGAATCGTGCGACGCTACCAATAAAGCATGTAATA CCATCGTCTCCATGCTGAACACAGATGAAAATAACAACGCACAAGAACCA ACCAGTGAGAAGACGTTGTCAGACGCAGCAAAGATTCTTCTATCGGCAAT CACCAAGATTCTGATACTGGCTGATCGAACGGCTATATTAAAGCTGGTCA AATCTGCAGCTAAGGTTTGTGAGAGTGATTAAGTGTGGAACAAACATCTT TGTTTAGAAGATCAAGAAGGAACATCTTTTCTAGATTGGCAAAATTTATG GCAATTCTGCTCATTTTATAAACAACAGTTTGATCTTCAATTTGAATACT TGTGAATTAAACGTCTCTCACTTCAGGTGAACGCCCGTTTAGAAGAATTA GAAAGTGTGACGAATTTCACGGAATTCGTCAACGCGTTCAGTCAATTTGG TGGTGATATGGTTGAACTGGCCTATGTCTCTGGTGAAAGACAAAATGTAA GTATTTTCAAACTTAAACCTCTGTCCTGGAGCACTCAGATGGAATATTTT TCCACTATAAGACTCTGTTATTCGTAGGCTATTTTCTTTCAATAAAATAA GAACTATACGTGCATCCTCATTTAGATCCATATGCATGGATATTGACTGC TCGGAGTTGGAAGTTGCTGGGGATTCCTGCGAGCTATTATACCTCGGTAA TGAGCCTCTTTATAGTAAGTTGAACAAACATTGCTTATAAAAATACTATA GAACAACTCTTAATGTATAAAATATTTCTCTCGTTATAGGACTTACGTGA TGAATTACAAAGGGCAGAAGTTTGTGCAGCGAGAGCCATTCTTGAGAAGT CAACCATGATGTTACTCACAACTTGCAAGGTACATTTCAATCCCTCATCT TTTCATTTTCTTTGCAATTTTTTCCTATAACTTGAAAATATTTTTATATC TAATATATTAATATATTCAGTATCTTAAATTTCCTGGTAACCAAAAGATT ATGTCAGCTGCTCAGGCAACCTTTCAAATGATTTTATAAAGTTCACAATT TTTTTCAAATTTTTACGGAAGAAAATATCACATATATACGACATTACGCT ATTGGAGACACCTTTTCATAAATTACGTCACGAACATCACTTGCCTCATT TCGAAATTATTGCCATGGTGATTAACTCCCAGCGGATTTCATTAAAACTA TTTTCTGTTCATAAAAAAATCATTTAATGTCTCAAGGGACATAATCACCA TGGAAATTGTTTGAATACGAGGCAAGTGATGTTCGTGACGTAATTTATGA AAAGGTCTATTGGAGCCGCATTATTAAAAATCTGATAAAATTCTTTTTAC AGACTTGTTTACGTCATCCCGATTCACCGTTAGCGAAAGGAATACGTGGG GCTGTCTTCCAAAGCATGCGAGACGCAATGACGACGTTGAAAGCTGTTAT TGAAAACAATGAATGTCCTGGGAAAGCTTTCTGTTGTGGAATTTCACTGG ATTTGAATAATACAAAGGTATTGGTCAATGATTTTTAAGAAAGTTCTATG AATGAATCTATGACTGCTTACTGTCAACTTTATTGCAAAGGCGCACAGTG ATCTTAAATGTCGTCCGCAGGCGAGGTTATGTGGCAAGTCAATGACCTTC ATCCTGGCTAACCAATGCCATGCGAGGGGAATTGGGTAGGCAAAAACTTA GGAAGCTTTTTGGGAGCTGTGCTAGGTGTCGATTTCACAATACACCGTGG ATGGTGTAAGTGCGCAGGTCTTGCTCCCTAGTGGTTCATGCCAGATTAAC GCACTTGATCCAAAAAATTGATTGTCAGTATCGAATGCTGGTAGGCAAAA TAAACAATCGTGAAGACAGTCTTAACGAGACGACTCCTAGACCGCTGAAT GACCGGCTATCATCTGTAAATGAGAATCCACTTATCACTGTATTTTATTT TTGTTAACTGTATATTTGAATTCTTAACTCTCGTAACCCACAGGAAGGTA TAGAAGATTTATTGAAAAACCCCAAAGATTACCAGAAGATGGAAAACCTA ATAGACACGGTGGACAATATTAATATCGACATGGAAGATCTTATTAACAA AGAAAATATTGAAGATTCAAGAAAATCATTACTAAAAGCTTTGATAATGC AATCGAAAGGTCTTCATAAAAACCTGTTGGAATTTGTGGAAGATGACCAG GTAAGAAATTCTGATTGGAAGGTTTTGGATCTGACCATTTAGTTTAAAGC CCTGAAGGGGCTACAATCAGTGAAAAAATATGTGGCAGTTGTGAGCTTTT TCTGAGCATGGTGGCAGCCTTTCTACCCATCAACATTGATACTAGGGGGG GAGAGGGAATTCTTGCCACAATATTTAGTCACAGATTGTAGAGATGAATC TTTAACCTTTCTCAAGCAAGAAAAAGTGAAGCCTTAAGATTTGCGCGGCA TCTAGAATAAAGAATTGAATCTAGCTTTTTTTAATTTTTAAGCAGCACAT TTTTCGAAATCGGGCGATAAATTTTACTTTCAATCCAGCGTTTGTGTGAA AATACTGGATGGCAAATAAGTAGCTTTATTTCCGATTTAAGACTTTCCGA TCTAGGACTTTTAGGGTTTTGAAATCAACGTGTCTGATCCATGTCTAAGT AAGGGTAGGTGCACATTCGATACTCGTTATGTAGCATCGCATATGCAAAT TCAGGATAGACGGCCCCACATCAAGGCTCTACCGAAGTCTCTTTTAAGAG CACAAAAAGAAAACTCGAGAAAAATGTAAAATTCTATACTAACAGTTTCA AGAAAATATAATTTCTTGTTTTTTTTCCTATAAACCAAAGGTGACTGAAG ACGAAGAGAACATATATAAAACGTTGAGAGAACTTTCCGATATTTGCGAT GAAATGCTGGAAGAGGTAAGAGACGTAAATCAAATGAGTCGAAATAGTTT TTATGATATCACACTTTGAACTGCAGTATAAAAACAAAATGCAAAATGAA TACTCTTGTATTAGGTACCCTTTCTCTTTTGTACGTCCTGCATAAATTCT TACTGTTCCAGTACTTGTTCTTGAGTCTAGAGAATGTGATTGGTCAAACA ATCGTCGTTTTTTGTTGTTCTTTTTGTTTTCGTTAGAATTCTTAAAAGGG GAACTGAAGAAAAATATTTTTTAAGTTTTAATATGAAAATGTACATTATT TTTTCAGTCCAGCAAAGCGAGTGCAGAGCAAGTGTTTCATCTGGTAGAAA CATGTGAATATAAAGAAGTTTTAGCACGTCTGAAAGAATCGGCGCTCTCC GGTGAACTTGATAAAGTCGAAGAAACTGCAGAACGATTGGAAAGTGTGCT TAGTGAAATTTTACAGGTATGTCGATGAGTTAATCATAATAAAACTAATC TAAAGCACCTGATTGAATGCAAATTTTTTGACTGCCTGGGCTTTTATCAA TAGCCTTTTAAATAATTCCTTCAAACATGAAAAACAGAAATCCCTTATTT TCAAATAAAAACTACTATTACTACTCTACCTATTTTACTTCTTTTTATAG TCCATCCAAGCAATAGTTCAAAATAACTAGAACTGCAATATAAACTACAA TATATATAAGTACTACCGGGCTACTGAATCGCTCCATCAAGCTCATCACC AAGCCCTAGTGGCTCAGGCGACGCCAAGTCCGCATGCGATTTTAGGGGGA TAGGGAGCTGGCAGCTAGTTTATATCTGAAAATCGCATAGACGGTTCTGA TGAGACAGCTAACTATTTTTCAATCATATTTACCATACAGGTTACCCGGC TGACAAAAGCCACGAGCAATATAGATGCTTGTATAATCACAGCAACAAGA TTAGAAGAAAATTTGATCAATCTGATGCCACAGGTTTTTCCATTACTCTT AGTCATCCCTGTACTGTGACTCCTTACCAACCTCATCCGAAAATCCCCTT GACACTACCCTCTCTAGCAAAAAGATATTACTTGATCACTGAGCCAGGGT TTTAAGTTATGGTATTACCAAATAAATACCTCGCTAAAATATTTCTTACA GTAACCTTTTTCTTACATAAACCTTTTCGACAGTGGAATGATTATTTTGA ACAAAAAAAAAACCCATTCGATATATTTAACACCCCTGTGTCACAGACCC GCTGAGGCCCCAGGCCCACTGGAAAATTTGGCAATAATTTTGTCGCCGGT GGGAAAATGCCCTAGAATTTCAACCCCATTGAGAAATTGACTTTGATGTC ATCCCCATTCGAAATTCAATGCTTAAAAATTTCACTCCAAAATAATCCCC ATTGGATTTTTTAATCTTGGAAAATATATAATTTTTATCCCCACTGTGGG AAAACGTTTCACCAGGACTGTGAGACAGGGGTGTTATTTATTTAGTAAAC ATCTCTTCCATGTATATGTACCTTGCCTATCAAGGTTGGAGTATTGTAAC ATTCACGTCATTTTGGTCATCGATTTTCTTCCAGGCCATTGATGCAGGAA AAATGTTATCAGCACATCCAACAAGTAAAATTACTCAAGAAAATTTTGAA GTCTTTATTGATGTATGGGATACGCAGGTTGACGAATTACTTACATTACT GAGGAATATCACCGAAGGTCACACGGAGAGTAAGTCGAAACAATTTCAAA ATACTCTTCCTTCAAGGCTTCAATTGACTGAGTCTGTTTGTTTTTCCTAG TCCTTTGCATTTGCGGTTAACATTTGTATTCTAACCAACGTTTTTACGAT CGACAATTTTCCACAAATTATTCTTATGATTGTATCAACTTTCAACTTTT GTGATTTTGTAAACCCCATAGAAGACCTTACATAAACCACTATCTTTTGT AGCACTATCTAGCGCGTTTATATTTACTGCATGCTTTAATGATCTTTCCA GATAATGAATGGCTTACAATATATATACCAATGGCATCCAAAATAAATTC ATAATATCTACTTGTTGTTTGTTGATGTAAAATTGCACGAGTATGTATAA ATATGCACTGTCTTATAATATGTTGCACACACTATTTTTATTAAATTTAT GCATGCCTGCCCAATTTTTAGCTAGTTTATAATACGTCCTTTTAAAAGTC CATTCGTTTTAAATACTCACCAATTTTGTTTTGCTCGTCAATTGATTCCA TAACCAATGCTAAGATTTAACAAAATATGTACCCTTGAAAAGATAATTCA GAGCACTCATGTAATATTTGAGAAATGGAGTGATGAGAAAAATGAGCGAA TAGAAGCTTCGTTTTATACCGATGTAAGATTTACCAACACTTTCTTCTAG AAATGAATTATATGGGATGTTTACACCATTAAAGTGAATTGCAACATAAT TGATTAACCGTTTAAGTGCCACGGTCATTTTTTAAAGAAAATCGCTAGTT CAAACTTTAAAGGCTTATATCTCCGGATCTAGAAGAAGTTAGAAGCTCGT TTTTTTGTCAAACTTTTGCATTTTTTTTTTACTTTTTGGCTTAAAATCTC GCTGGAAAGACCTACTTTTGATTTTTTTTTTTTGCTTGACCATGAAGTTC AATCCAATTCCTACGAGTCAGATTTCCAACTCAAACTGGGCATTACAGTC ACTCCTTCGCCCTCCTTCATAGCCCATGTCTGATATACACGACATTGTCA CTTAAAGGGTTAAGAGTAACTTGTTGAGACAGGACTGTATAAGGCTGATA CTCATAATAATTTTGAATCGAACTTTCGTTTCAGGTTGAATTTTTTGCAA CTCGCAATGACTGACGGTAAATGGCGTTTGATGTAAATGTATTTTTACCA TTATTTGAAAACTACAAAAGTTCTTTGTAAAATAGATAGGAAAGTCAAAA AAAGTTGAAAAAAGTATTAGACTATCTTTGGGAAAACTTGGAATCAATTT ATGAAAACATGGAAACAATCTGTTTTACTGAAAAGTGGACTAACTAAATG AAATCTAGTTATGCAGCCACCAAAGCACATCAGTGTGAAAACGTTCCAAA TCATATCTTTGTGCCTTTTTTAATCTCCAAGTTAGGCTATTAAGATTATA TCTTATTTGCATTTCCTTAGTTCAATTTTTCTTAGAATTTATTTTGGAAA CACACTGTAAATATTGCAATTTTTGAGCATTAAATTTCACCAGTATTTCC TTACTTAAAGGGATTGAATTTTAAAAGTACTACACTTCTGTACGAAATTT TAAAATATGGCGCCTTTTGAGATAATTTTCAATAAAAGTTTACATGTTAC TTACCAAAGATTTCCGGTATTTTGATGAAATTTAACGAAGTTTTATAATT TCATCACCGCAAAAGCTGATTTATTTTGAATTTAATGCAAAGTAAAACAT ACAACATTTGAAAGAAATAATTCAAGTTTGTTTTTTCTTTCCTGTCATAA TTTCAAGTCAAAATTTTATCTAGGAAAGTTTATATTCAAATTTTGAGCAA ATTTTTGGAAGCGTAAATTTTGTGGCCCATGTGAGCATTTGGCGTCAAAG AACTAGATTTCGAATACGTAGAATTCTGAATACCTTTGTAAGTATAGTTT TAAAATCTTTATTTAATAATTAATTTTTCTTCATTAATGGATGACTCTTT AAAGATGTAAATAGCATTTTATTTATGAGATGGTCATGTTTTGTTATTTA GCTTTTGTGTTTCGAACTTGAAGAAAATGAAAATTGAAAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043153XLOC_043153Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069261-exon-scaffold_496-1575043694:512957..512996TCONS_00069261-exon-scaffold_496-1575043694:512957..512996Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:512233..512441TCONS_00069261-exon-scaffold_496-1575043694:512233..512441Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:511951..512070TCONS_00069261-exon-scaffold_496-1575043694:511951..512070Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:511568..511657TCONS_00069261-exon-scaffold_496-1575043694:511568..511657Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:510930..511094TCONS_00069261-exon-scaffold_496-1575043694:510930..511094Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:510247..510453TCONS_00069261-exon-scaffold_496-1575043694:510247..510453Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:509532..509606TCONS_00069261-exon-scaffold_496-1575043694:509532..509606Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:509081..509239TCONS_00069261-exon-scaffold_496-1575043694:509081..509239Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:508564..508656TCONS_00069261-exon-scaffold_496-1575043694:508564..508656Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:507818..507962TCONS_00069261-exon-scaffold_496-1575043694:507818..507962Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:507457..507545TCONS_00069261-exon-scaffold_496-1575043694:507457..507545Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1575043694:505753..506712TCONS_00069261-exon-scaffold_496-1575043694:505753..506712Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:512957..512996TCONS_00069261-exon-scaffold_496-1510915933:512957..512996Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:512233..512441TCONS_00069261-exon-scaffold_496-1510915933:512233..512441Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:511951..512070TCONS_00069261-exon-scaffold_496-1510915933:511951..512070Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:511568..511657TCONS_00069261-exon-scaffold_496-1510915933:511568..511657Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:510930..511094TCONS_00069261-exon-scaffold_496-1510915933:510930..511094Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:510247..510453TCONS_00069261-exon-scaffold_496-1510915933:510247..510453Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:509532..509606TCONS_00069261-exon-scaffold_496-1510915933:509532..509606Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:509081..509239TCONS_00069261-exon-scaffold_496-1510915933:509081..509239Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:508564..508656TCONS_00069261-exon-scaffold_496-1510915933:508564..508656Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:507818..507962TCONS_00069261-exon-scaffold_496-1510915933:507818..507962Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:507457..507545TCONS_00069261-exon-scaffold_496-1510915933:507457..507545Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1510915933:505753..506712TCONS_00069261-exon-scaffold_496-1510915933:505753..506712Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:512957..512996TCONS_00069261-exon-scaffold_496-1491911889:512957..512996Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:512233..512441TCONS_00069261-exon-scaffold_496-1491911889:512233..512441Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:511951..512070TCONS_00069261-exon-scaffold_496-1491911889:511951..512070Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:511568..511657TCONS_00069261-exon-scaffold_496-1491911889:511568..511657Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:510930..511094TCONS_00069261-exon-scaffold_496-1491911889:510930..511094Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:510247..510453TCONS_00069261-exon-scaffold_496-1491911889:510247..510453Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:509532..509606TCONS_00069261-exon-scaffold_496-1491911889:509532..509606Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:509081..509239TCONS_00069261-exon-scaffold_496-1491911889:509081..509239Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:508564..508656TCONS_00069261-exon-scaffold_496-1491911889:508564..508656Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:507818..507962TCONS_00069261-exon-scaffold_496-1491911889:507818..507962Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:507457..507545TCONS_00069261-exon-scaffold_496-1491911889:507457..507545Clytia hemisphaericaexon
TCONS_00069261-exon-scaffold_496-1491911889:505753..506712TCONS_00069261-exon-scaffold_496-1491911889:505753..506712Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_496supercontigscaffold_496:505753..512996 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.254282 0.152221 4.84553 0.00304559 6.56338 5.54747 4.81055e-10 2.21991 0.797968 1.67058 1.50909 0.739987 4.5479 4.50699 0.171687 0.277912 0 0 1.5939 3.50149e-06 1.98743 0.26583 4.23338e-05 0.974322 0 0.18687
Blast
BLAST of TCONS_00069261 vs. Swiss-Prot (Human)
Match: CTNL1 (Alpha-catulin OS=Homo sapiens GN=CTNNAL1 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 8.953e-42
Identity = 149/465 (32.04%), Postives = 250/465 (53.76%), Query Frame = 1
Query:    1 IGHEMGNANDNIRDDMVESCDATNKACNTIVSM-----LNTDENNNAQEPTSEKT-LSDAAKILLSAITKILILADRTAILKLVKSAAKVNARLEELESVTNFTEFVNAFSQFGGDMVELAYVSGERQNDLRDELQRAEVCAARAILEKSXXXXXXXXXXXXRHPDSPLAKGIRGAVFQSMRDAMTTLKAVIENNECPGKAFCCGISL--DLNNTKEGIEDLLKNPKDYQKMENLIDTVDNINIDMEDLINKENIEDSRKSLLKALIMQSKGLHKNLLEF---VEDDQVTEDEENIYKTLRELSDICDEMLEESSKASAEQVFHLVETCEYKEVLARLKESALSGELDKVEETAERLESVLSEILQVTRLTKATSNIDACIITATRLEENLINLMPQAIDAGKMLSAHPTSKITQENFEVFIDVWDTQVDELLTLLRNIT---EG-HTENNEWLTIYIPMASKIN 1350
            +G  + N N ++++++  +C    +A  TI ++     LN  E++      ++KT +  AA++LLS++TK+L+LADR  I +++ S  KV A +E LE V +F EFV  FSQFG +MVE A++SG+RQNDL+DE ++A++ AARA+LEK TMMLLT  KTCLRHP+   A   +  VF  M+ A+  +  ++ + +  G+     IS+   +   K  IE L +N   +Q  ENL  T++ I   MED  +        +  +  L  Q++   + L+      +  +     E +  ++ ++S   +E+ +E    + +    L++      VL  LK + + G L+ + E A +L     ++++  RL +  S  +   IT    EE       Q I A + L+ HP+SKI +EN +VF + W++Q+ ++ TLLR I    EG   E   +L++  PM +  N
Sbjct:   85 VGEAIANENWDLKEEINIACIEAKQAGETIAALTDITNLNHLESDGQITIFTDKTGVIKAARLLLSSVTKVLLLADRVVIKQIITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLSGDRQNDLKDEKKKAKMAAARAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVFDRMKVALDKVIEIVTDCKPNGETDISSISIFTGIKEFKMNIEALRENLY-FQSKENLSVTLEVILERMEDFTDSAYTSHEHRERILELSTQARMELQQLISVWIQAQSKKTKSIAEELELSILKISHSLNELKKELHSTATQLAADLLKYHADHVVLKALKLTGVEGNLEALAEYACKLSEQKEQLVETCRLLRHISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMSTLLREINDVFEGRRGEKYGYLSLPKPMKNNAN 548          
The following BLAST results are available for this feature:
BLAST of TCONS_00069261 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTNL18.953e-4232.04Alpha-catulin OS=Homo sapiens GN=CTNNAL1 PE=1 SV=2[more]
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