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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069295 ID=TCONS_00069295|Name=TCONS_00069295|organism=Clytia hemisphaerica|type=transcript|length=1527bp
GAGGATGACTATCATGAAAAAATGATCATATGCAAAATTACCCAAAAAAA
AGAATGGAACCCCAATGATTATGAAAGTTCCGGTAGTGAGGACAGATGAA
GATGAAGTAATTATTAGCATCACAAAAAAGAAAgggaaaagaaggaaaaa
ttaaAGGCCTGAGGCGTTTGTTAATGACATAGTAGACGTCATCGTAGACG
gtgagaaatacaaagaaaagcTGTTACAATAATGTTAAAAAGGACCAAAA
GGTACAATACGAAATTGAAGAAAGATGCCAAGAACgcggagaaaaaaatt
caaatttgatgTTTCGCAATGCCGTACAAAATTTAAACAATGTAGTTCAT
ACGTAGGAAAGCCATATTGATGATTGAGACAAAGTTTGAATTGAAAGAGT
TCAGAAAAGCAGAGGGTATCGTATATGGCAGTTAATTTTCAAAGCTGTTA
CCAGTTATTAGTTGATAACTCTCAACCTCATCAATCAATCGAACCTAGTA
CCAGCTCTCATGAAATTCCTCATAATGGTTTATAAGGTGACACAAGCAAA
CAAGCCCAGACAGCTCAAGTGAAAATGGTGCTTAAACCACGAATAAAAAC
GACCAAGACGAGCTTTAGAAAAACCTTTAAAGAAATTCAATCAAAAACTA
AATCAGTGAAAGTCTGTTATCCCAAAACCGTCCAACCAAAAGAAGCCTTT
TAAAACTGATAAGGTTCTCATAGAGAATATAGATACTGTTTCCAAAATGG
AAACAATTTTACATCAGAAAATCTGTCGAGATTTTATGGTGCTACCACGA
ACCGAAAATTGGCCCGAAAGGGCCTTGTCGGTCGTGGCCTTCCTTTTTTT
ACGATTCTTCAAGAAGGGACACAGAAGCACAGCTAAAGCGGGAAGTTATT
ATCTTTATTAAATCTACGAAATATACTCTTAAAATGGTTGGAAACATact
aagaaacacacttttaaaaaacatgaggctcagaatgcctgaaaactaag
aaaaatctaagaaacatgctgaggcagagaatgataaaataacatttttt
aattcgttttttttcaagaaccttccaatccagccttccatgaggctgat
tatgtcaaaaagtttagaaacatgtaagaaacatttaaggctcaaaaggc
cgatttcttaagaaacattgaggctgcttggtaaaactagtttcttaaaa
aaaaacgtgtaagaaactatcaacactcgatctgagaaaaaagttccagA
GAGGGAAGTTCCTGCCAATGAAAGTCGAGAAGAAGAAATCAACCAGAAAT
TCAGCCttctaaacattttttcaaaaacaccatcGAACATTAAGTTGGAC
CCATTCACGAAGACCCTTCTAGAAAGAAAGGGATGAAATCGTGTCGTGTC
AGTAGATGATGAACAACAACAAGAATCATCAAAAGCTGTTCCAAGTTGAC
AGTGCAAGGGGTGGTAAATGATGAAATAGATTCTGACCCAAGTGTTGTTT
CAAGGCAACTAAATGACTTCATCATAT Run BLAST on NCBI transcript from alignment at scaffold_496:283435..284961 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069295 ID=TCONS_00069295|Name=TCONS_00069295|organism=Clytia hemisphaerica|type=transcript|length=1527bp|location=Sequence derived from alignment at scaffold_496:283435..284961 (Clytia hemisphaerica)
ATATGATGAAGTCATTTAGTTGCCTTGAAACAACACTTGGGTCAGAATCT
ATTTCATCATTTACCACCCCTTGCACTGTCAACTTGGAACAGCTTTTGAT
GATTCTTGTTGTTGTTCATCATCTACTGACACGACACGATTTCATCCCTT
TCTTTCTAGAAGGGTCTTCGTGAATGGGTCCAACTTAATGTTCgatggtg
tttttgaaaaaatgtttagaaGGCTGAATTTCTGGTTGATTTCTTCTTCT
CGACTTTCATTGGCAGGAACTTCCCTCTctggaacttttttctcagatcg
agtgttgatagtttcttacacgtttttttttaagaaactagttttaccaa
gcagcctcaatgtttcttaagaaatcggccttttgagccttaaatgtttc
ttacatgtttctaaactttttgacataatcagcctcatggaaggctggat
tggaaggttcttgaaaaaaaacgaattaaaaaatgttattttatcattct
ctgcctcagcatgtttcttagatttttcttagttttcaggcattctgagc
ctcatgttttttaaaagtgtgtttcttagtATGTTTCCAACCATTTTAAG
AGTATATTTCGTAGATTTAATAAAGATAATAACTTCCCGCTTTAGCTGTG
CTTCTGTGTCCCTTCTTGAAGAATCGTAAAAAAAGGAAGGCCACGACCGA
CAAGGCCCTTTCGGGCCAATTTTCGGTTCGTGGTAGCACCATAAAATCTC
GACAGATTTTCTGATGTAAAATTGTTTCCATTTTGGAAACAGTATCTATA
TTCTCTATGAGAACCTTATCAGTTTTAAAAGGCTTCTTTTGGTTGGACGG
TTTTGGGATAACAGACTTTCACTGATTTAGTTTTTGATTGAATTTCTTTA
AAGGTTTTTCTAAAGCTCGTCTTGGTCGTTTTTATTCGTGGTTTAAGCAC
CATTTTCACTTGAGCTGTCTGGGCTTGTTTGCTTGTGTCACCTTATAAAC
CATTATGAGGAATTTCATGAGAGCTGGTACTAGGTTCGATTGATTGATGA
GGTTGAGAGTTATCAACTAATAACTGGTAACAGCTTTGAAAATTAACTGC
CATATACGATACCCTCTGCTTTTCTGAACTCTTTCAATTCAAACTTTGTC
TCAATCATCAATATGGCTTTCCTACGTATGAACTACATTGTTTAAATTTT
GTACGGCATTGCGAAAcatcaaatttgaatttttttctccgcGTTCTTGG
CATCTTTCTTCAATTTCGTATTGTACCTTTTGGTCCTTTTTAACATTATT
GTAACAgcttttctttgtatttctcacCGTCTACGATGACGTCTACTATG
TCATTAACAAACGCCTCAGGCCTttaatttttccttcttttcccTTTCTT
TTTTGTGATGCTAATAATTACTTCATCTTCATCTGTCCTCACTACCGGAA
CTTTCATAATCATTGGGGTTCCATTCTTTTTTTTGGGTAATTTTGCATAT
GATCATTTTTTCATGATAGTCATCCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069295-exon-scaffold_496-1491911889:283435..284961 | TCONS_00069295-exon-scaffold_496-1491911889:283435..284961 | Clytia hemisphaerica | exon |
| TCONS_00069295-exon-scaffold_496-1510915933:283435..284961 | TCONS_00069295-exon-scaffold_496-1510915933:283435..284961 | Clytia hemisphaerica | exon |
| TCONS_00069295-exon-scaffold_496-1575043694:283435..284961 | TCONS_00069295-exon-scaffold_496-1575043694:283435..284961 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:283435..284961 . |
Blast
The following BLAST results are available for this feature:
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