TCONS_00069361 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069361
Unique NameTCONS_00069361
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1873

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069361 ID=TCONS_00069361|Name=TCONS_00069361|organism=Clytia hemisphaerica|type=transcript|length=1873bp
CAGAAAAAGGTCGCATTTAGAAAAGAgatgattttaatttcaaagtGGAC
ATTTTAGGTGATTTTCAATCTTTTATACATTAAATTAttacaaaaaagat
tttataaatACAATTTTCATAattcctttttcatttaaaagccTTATATA
AGAATTTCTATAAGTAGAtaatattttgttaattttttttattttagata
aTTTTAGAGCTGCATTTGAGACTTTTTGTAACTGGTAATGTTATATTCCA
GTAGTACAAAGAATTTTAAAGCCATACACGAGGCTGTTTGCTGATATTGG
AAAAGCAATGTTAAATATTTGTTCCATCAAATATATAGACCATTTCACTT
CAATTATTGTTTGACATCTTTAGGATCAAAGCGTTCGGAAACAATGCCCT
AGaggataaataaaacaaaaaatcaacactacaacatcaacaacaattgc
aatgtcttcattctTTGGCAAAGCTATCAACAAATACCAACCAATCCCAG
AAGATGGTAAAATCAACACTGATGCTTTTTTGAAAGCTTGCAGTGAAATT
GTCCCTTTCTTTGATGTGTTAGGGTCCACGGCATTTGCACCAGTCAAATC
GGATATCAATGGAAACATTGCtaaattacGTAAGAAGTATGACACTAATC
AAGAGAAATTTATAACACTGCAAGACATTGTGAACAGTGAAATTGAATCC
AACACAACCAAAGCTAAAAATTCCGCCACTGACGCTTTGTTATGGTTAAA
AAGGGCATTGTCTTTTATCCGTGTTTTCTTGGAAGAAGTAATGACAGGCG
AAGAGGATTTAGTGAAGTGCGCCAAAAAAGCTTACGAAAATTCACTCAAA
CAATTTCACGGATGGATGGTGCAAGGAATTTTCTCAttggCAATGAAAGC
GGTACCATATCGTAAAGATTTCATGAAATCTCTTGGTCCTGATACCACCG
AGGATGTAGTCTTGgctgaaatgaaagaaactgtCACCACAATGGCTGCA
AACATCGATCAATTGAACCAATTTTATTTGGATACTAAACAAGATAGCTC
ACAAAAagtttagatttttattttgactttctATAATATACTCCTTAGTT
TATTAGTATTCTCTGGCTGGCATTCTTGAAGGCTCAAAAGATTCTAAATT
AAAGACAACATTTTTATCGAGCGGGCAATCCTGGGCAATTTGAAGTTCAT
TGTTCTAATTCGAATCCTCAAAGTTCTCATAAAGTGGTGAATTTTAATTT
GGAAGCAGCAGGGTAGATAATGTTTCGTAAACAGCTTGCCTTTTGTTGAA
TTGTGTAAAATGCTACTGCGCAGACGTAGGATATTATATGATTTTCACCA
CATTTTACCAGGGAATACTGATAAAAATATTGTTTGTAGTTTTACAGAAT
GTCTCAGAAAAATTTTCTCCTAAGTAGAATCTATTGAGAAGTTTTGTGGG
ACACTCtgtatttagtttttttctgttgggtagggaatggattttttttc
tttttgtttgttcTGTTGCTAACTTTAATAGGTGTTTTAGGTAAGGATCC
AATCAAACTTAGTAAATTCAACCTCGATAGTGGTTTCTACGTTTGAGCCA
aactgaaaatcttttcaaGATAGTACGGTAGGCTTTTTGACTAAcacaat
aaaaatgtttttaaaactttacgaTAATGAAATCACATTTGATCAGTATA
TTCAGCTAGTGGCTTTTCCTGCAggattttttttatatgtcaacaattat
ttatttttcaattttataaaaatcaataaaattttccaatttcaacgTAT
ATCAATCAGTGAGACGATACACCTAAACGAGTTTATTCTACACGTTGTAG
AGATTGAGGACATTTTCAACGAA
Run BLAST on NCBI

protein sequence of TCONS_00069361-protein

>TCONS_00069361-protein ID=TCONS_00069361-protein|Name=TCONS_00069361-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MSSFFGKAINKYQPIPEDGKINTDAFLKACSEIVPFFDVLGSTAFAPVKS
DINGNIAKLRKKYDTNQEKFITLQDIVNSEIESNTTKAKNSATDALLWLK
RALSFIRVFLEEVMTGEEDLVKCAKKAYENSLKQFHGWMVQGIFSLAMKA
VPYRKDFMKSLGPDTTEDVVLAEMKETVTTMAANIDQLNQFYLDTKQDSS
QKV
Run BLAST on NCBI

transcript from alignment at scaffold_498:380844..388544-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069361 ID=TCONS_00069361|Name=TCONS_00069361|organism=Clytia hemisphaerica|type=transcript|length=7701bp|location=Sequence derived from alignment at scaffold_498:380844..388544- (Clytia hemisphaerica)
CAGAAAAAGGTCGCATTTAGAAAAGAGATGATTTTAATTTCAAAGTGGAC
ATTTTAGGTGATTTTCAATCTTTTATACATTAAATTATTACAAAAAAGAT
TTTATAAATACAATTTTCATAATTCCTTTTTCATTTAAAAGCCTTATATA
AGAATTTCTATAAGTAGATAATATTTTGTTAATTTTTTTTATTTTAGATA
ATTTTAGAGCTGCATTTGAGACTTTTTGTAACTGGTAATGTTATATTCCA
GTAGTACAAAGAATTTTAAAGCCATACACGAGGCTGTTTGCTGATATTGG
AAAAGCAATGTTAAATATTTGTTCCATCAAATATATAGACCATTTCACTT
CAATTATTGTTTGACATCTTTAGGATCAAAGCGTTCGGAAACAATGCCCT
AGGTACGATGTAGTTTAAAAAAATAAACATTATATTGTCAAACTAAAAAA
TCCACTGACTTAACGCCCGCAATTTTTTTTGCTAAGAACAGTAACGTTTC
TGCAAGATCAGCATTTTTTTCATATCAATCTGGCTTTAACTTTCCTAGAA
ATGGGCTATTCCAAAAATAGTGTGTACCCCCTATATGTTGAGGAGGTGTG
ACGTCCAGGGTGATTTGGTTTTTCGAGTGTAAGAATCCAGGGTTAAAAGG
AAGTGGAAGATCCAGGGTGGTCGATAAAACTGAGTCAAAAATCCAGGATG
GTCCAAAAAATACGAAAAAAATTCTAGGAGCTCTTGAAAAATTGAAAAAA
TCCAGAGGAGTCACCTTTCCCAAAAAAGACCTCCTCGACATAGGGAGTAA
AATTTTTTCTGGTATAGCCCAATGTGACTATTATTACTTTGCAGTTTCAA
TGTTGTTTCCAAAGACACGTATATTGAGAAACCAGAAAAATCCGTTCAGA
TCTATCAAAAGTGTGAAATTTGGGCGAGAATTCTTTTAAAAAGATATTGC
TAATGTTAGATTATTTTTCATTTTGATACATATCCAATAATGTAGATTTT
TTAAACGAGTAATGACATTTTTCATTGTAAAATTTTTCTTATCAATACAG
ATTTTCTATATAATATTTTTTTTCTTTAAGACTTAAAAATGTGTTAAGAT
AACTTTAAAATATATTGTAGTAGGTTGTGTACATGAATCCTCCTTCTTGA
AGAGCGACTTTTAAATTTTGAAATTTCGTATGTGTTAGCTGAATAAAAAT
CTAATTCGATCTAGAGAGGGACAGAGAGTAATGAAGAGTTTATTCAATTT
TTCTTACTTTAGAAAGTCAGGTCTCTTTAGGGATGTTAGGCCAGGGATAC
GTAATTCTTAAGGTCTCCTACAACGGACTTCCATAGAATTTTCGATTCAA
TTATCAATATTTTATTGCGGTATGCTTTGCTCATCAGAAAGATTTTATTA
TTCTTTATTTTTTTAACAGAGGATAAATAAAACAAAAAATCAACACTACA
ACATCAACAACAATTGCAATGTCTTCATTCTTTGGCAAAGCTATCAACAA
ATACCAACCAATCCCAGAAGATGGTAAAATCAACACTGATGCTTTTTTGA
AAGCTTGCAGTGAAATTGTCCCTTTCTTTGGTAAGAGGCTTTTAATGCTT
TAGAAAGACAACCCCCTCTCACAGACCCACTGTTTTAGAAAGACACCCAA
TGGGACCCCTCCTCCCGCTGGAAAAATTGGCCAAAATATCGTCCCCCGTG
GAAAATTATATTTGATTGTGTTTTTTTCGATCCCTACTGAATTTCTGGCC
TAAAAAAATTCAAATCCCCAGCCATAAAGAACATGGGAATACCATTCCCC
ATTGGGATTCGTTCCGTTATTTTTACCCCCACTGGCTGAAAAATCCCACT
GGGTCTGGGAGAGGGGGCTGTAGAAAGACTTTTCTATTCCTGTTTAAACC
TAAAATTTTCAACTAAAAATGGGCTTAACCAGCTCTGACTGAGGTTTTTG
AAAGTTCAAAGAAAAGAATCTTTATGGCATCAAGTTGCGAGTTGGTGATC
TACAATGTTTTACAATGATCCCATTATGTTTCTCATATATACATATGCAT
CTCTGGTTAATGAACGAAGCTACAGTTTCTTAATTGAAATCAGAGGCGGT
TAAATAAAAACACTCTTTGTATTTCTGTTATTTCAGATGTGTTAGGGTCC
ACGGCATTTGCACCAGTCAAATCGGATATCAATGGAAACATTGCTGTAAG
TAAATAAATAAAATGCAGCTTCTCCGCTACATGCTTTTTTTATAAGAATA
ATATACTCATAAGAATATTAAATATGAAATTTGCCGATAAAAATTAAGGA
TATGCTAAGAATAGCATCTCATTTTTGGACCTACCCCGGTGGGGTAGAGG
TCCTATAAATTAACCCGTGTTCGTCCGTTCGTTCGTCCGTTCGTTACTAG
CTTTTCTCGGGATTGGCTCATTAGTTTTTCCTAATTTTTGGCACAAAGAT
GCAAAATGGTAATGCCCAAAATGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTAACAACGCCAACGTCATCAAGCATGATTCAATTA
TCAATAAAACTGATTTTTGCAACTGGAACTTTCTATTTCTTTTTTCCCTA
CTCTCCTTCCCTCTCCCCATCAACTATCAATGATAAAATTTAAGGCGTTT
TGCAATCTCGCTATAAACGCTATATTTTCTGACCTGATTGTTTTCATTTT
TCTCCTTATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATC
TAGCTTGTTATCTGTAAATTGTACAAATTGTATTGTTTAGATCTCGAGAA
ATCCTCGAGTGTATTCTGAGCTATTAATTTATGAGTATCCCGTGAATCTA
GTATGATACTAATTTGCGCTGTATATTTTTAGAAATTACGTAAGAAGTAT
GACACTAATCAAGAGAAATTTATAACACTGCAAGACATTGTGAACAGTGA
AATTGAATCCAACACAACCAAAGCTAAAAATTCCGCCACTGACGCTTTGT
TATGGTTAAAAAGGTGAGAAAATTGAATCATTTAACTAATAATAATAATG
TTTTACATATTTCCAGGCCACCGTGCAAGCACATGGGCCTCTATAAATCG
CTCATACATTGGTTTGATTTATTACAAAGGTTAACTTCAAACAGATATGC
AACAATAGTGACAATTTCAATCATACTCAAACGTTTTCTCTTTCCAAGCT
AGACCGAGGTTTTCTTTAAACTCTTGTATTGTAGATGATTTAACTACTTT
TTCAGGTAGGCTATTCCACTGTTGAATACCCCGATAGTAAAGGGAGTTGC
TCTGGGGTCCACGGACACCATCGTTCCCGAAAATTCTTACCAGTTCAGAA
TTATGTGTTCTCATTGGTCTTATTCGTTGGTTAAATTTCTTAGGAACACA
CGATTTTTCATAGTGATTTAAATGTTTAATGTGGCAATTGATAATCTGGG
AATAATGATTTTCAGTCTGAACCATTTACCTTATTACACGAATATTACTA
GTCATTTTATTAACACGAATTGAAAAATTTCGTGTTTAATAAAAACCCCC
TTAATTAAAACCAGCCATGGTGTCCTTGAAAAAGCAATAAAATTCGTGTT
AATTTTTGGAGTGTTAATTTCAAGGCCGTTGATTACTTACCTATTTTAAT
ATTCGTGTAATAAGGTATCAACTTGTTTACGGTCATCCCAGCACTGCCAA
CTATATCAGGATTTATAACTTTGTCGTCTCATACTTAATTTTATAAATAA
TTTTACGTAATTATTATGCTATTTCTAAAAAAGTTTCTGTCTGTATCCGG
GGGGGGGGTACTTAGGCAAAAATAGGTGCTGGGTATGTGCGGACGGTAAG
GGTCGGGTTTTTCACCTTTCAAAGTCTCTCTAAGGGTTACAAAAATCAGG
AAATTTCAAAGTAGTCTCTCTAAGGGTGGGAAAAATTTCGATTTTTAGAA
AAAAATTTTGGTTTTGAGATAAAAAATTACAAAAAAGTCTCACTAAGGGT
AGGAATCTTTTGAAAATCAGAGAACATTTTTCGAAAAAGTCTCTCTAAGG
GTCACTTTTTCACTAAAATTTGGTCTCTCTAAGGGTCGGTTTTCGGAGGT
CCCGTCCGCACATACCCCTCATTCCCCAACCCTAGTACCCCCCCCCCCGG
GGTCTGTATCTACAAATTAGGCATGTTTAATTCGAAACGAGTTCAAAGCT
ATGTAGCGAAGTGAGGTCAACTCTCTACCGCAGGTAGCTGTTTAAGGCCT
ATCCTGTCCTGTTCGAGTTAAAGGAACCGCAATCTTTACATAATATCACC
CAGCTGGAGTCGTTCATGTTTTCTTCTTCTTTTTTTTTCCATAGGGCATT
GTCTTTTATCCGTGTTTTCTTGGAAGAAGTAATGACAGGCGAAGAGGATT
TAGTGAAGTGCGCCAAAAAAGCTTACGAAAATTCACTCAAACAATTTCAC
GGATGGATGGTGCAAGGAATTTTCTCAGTAAGTCTAATACATCATCGGTC
TTATTTTTATATTTTTTCTGGTTCGGTGCAATTATAAGCACTAGCAAAAT
ATCGACTAAATAAAATCTGATTGGCTACCAACCTCGTTCCCAGGCGTATT
ATCAGCTTTTTTATGCTTACTGATAACGCTAGATAATTTTTTCTCTGGCG
CCAATCAGTAACGTAAATAAAGCCTGGAATACACGGGGACAAGGTTGATT
GGCTGTATTTAAATATCGACTCGTCCTCAGAAAATTTCGTTAAAATCAAG
AGTTAATTTACTAGATTTTTTTCGTGCAAATTACATGGATTCGAAGACCC
ATGTAATTCGGGCTCTACCTTTTTGCCCAGTTAACTTTGAGATCTTACGA
TTAGCCTTTGCCAATTTTTTCTTGAAAGTTTTAGCTCTATAAATTGTGAA
TTCAACAGAAAGCTGTTAATTATAAAATATGCTTACAGTTTCAGCCAACA
ACTTGCTGTCTAAATCTCAATTATATTCTTGCATACCTACTTTTCTAGAA
AGAGCAGTTTACTTTAATGGTAAAGATTATGATAATGCCTATACACGCCC
TTTTTATAAAACAATTTTATAACAACACGAGCCTGAAAATTGACCAAAAC
CTAAGAACAAATTAAGAACAATCTGAGCCTCAGATTTCAGAAATTACTAA
GACAATACATGTTTTTTGGACCTATCCCGGTGGAGGTCCCATAAATTAAT
CTCTGTCCATTCGTTCGTCCGTCCGTCCGTCCGTTCGTTACCAACTTTTC
TCGAGAATGGCTTATTAGTTTTTTCTGATTTCTTGCACAAAGATGTGTAA
CTATAAACCCTTCGAATGTGACGGGGCCGATTTTCGAAAAAAAATATCTT
TTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTT
TGAATCACTATTAATAAGCATACATAAATGTTCTCAGCCAAATTACTCAA
TTTTTTGATGAGATAGATGTTTTTTTGCTCACGAAGTCTTGAATATGAAA
GAACATTTCAAGAGCATGACATTTTTGTTTCTAAACGTTTTTTTATAAGA
AACAAACGACTAATTTTGATAGATCGTCACTATTTGTGTTCTGGAACGTT
ATGCTTAGAAACGTTATGCTCGAAAGAAAAAACATTTTCTTATTTTAAGT
AAAGAAACTAAGCGTTTAAAGAACATCGTAAGAACAAAATATAAGCTTAT
TTGTAACATATTGAATAATTTTTACTTTAAGACTTAAATCTTTATCTTTC
TAAAATATTTTTAGTTGGCAATGAAAGCGGTACCATATCGTAAAGATTTC
ATGAAATCTCTTGGTCCTGATACCACCGAGGATGTAGTCTTGGCTGAAAT
GAAAGAAACTGTCACCACAATGGCTGCAAACATCGATCAATTGAACCAAT
TTTATTTGGATACTAAACAAGATAGCTCACAAAAAGTTTAGATTTTTATT
TTGACTTTCTATAATATACTCCTTAGTTTATTAGTATTCTCTGGCTGGCA
TTCTTGAAGGCTCAAAAGATTCTAAATTAAAGACAACATTTTTATCGAGC
GGGCAATCCTGGGCAATTTGAAGTTCATTGTTCTAATTCGAATCCTCAAA
GTTCTCATAAAGTGGTGAATTTTAATTTGGAAGCAGCAGGGTAGATAATG
TTTCGTAAACAGCTTGCCTTTTGTTGAATTGTGTAAAATGCTACTGCGCA
GACGTAGGATATTATATGATTTTCACCACATTTTACCAGGGAATACTGAT
AAAAATATTGTTTGTAGTTTTACAGAATGTCTCAGAAAAATTTTCTCCTA
AGTAGAATCTATTGAGAAGTTTTGTGGGACACTCTGTATTTAGTTTTTTT
CTGTTGGGTAGGGAATGGATTTTTTTTCTTTTTGTTTGTTCTGTTGCTAA
CTTTAATAGGTGTTTTAGGTAAGGATCCAATCAAACTTAGTAAATTCAAC
CTCGATAGTGGTTTCTACGTTTGAGCCAAACTGAAAATCTTTTCAAGATA
GTACGGTAGGCTTTTTGACTAACACAATAAAAATGTTTTTAAAACTTTAC
GATAATGAAATCACATTTGATCAGTATATTCAGCTAGTGGCTTTTCCTGC
AGGATTTTTTTTATATGTCAACAATTATTTATTTTTCAATTTTATAAAAA
TCAATAAAATTTTCCAATTTCAACGTATATCAATCAGTGAGACGATACAC
CTAAACGAGTTTATTCTACACGTTGTAGAGATTGAGGACATTTTCAACGA
A

Coding sequence (CDS) from alignment at scaffold_498:380844..388544-

>TCONS_00069361 ID=TCONS_00069361|Name=TCONS_00069361|organism=Clytia hemisphaerica|type=CDS|length=3060bp|location=Sequence derived from alignment at scaffold_498:380844..388544- (Clytia hemisphaerica)
TTGGCAATGAAAGCGGTACCATATCGTAAAGATTTCATGAAATCTCTTGG
TCCTGATACCACCGAGGATGTAGTCTTGGCTGAAATGAAAGAAACTGTCA
CCACAATGGCTGCAAACATCGATCAATTGAACCAATTTTATTTGGATACT
AAACAAGATAGCTCACAAAAAGTTTAGGGCATTGTCTTTTATCCGTGTTT
TCTTGGAAGAAGTAATGACAGGCGAAGAGGATTTAGTGAAGTGCGCCAAA
AAAGCTTACGAAAATTCACTCAAACAATTTCACGGATGGATGGTGCAAGG
AATTTTCTCAAAATTACGTAAGAAGTATGACACTAATCAAGAGAAATTTA
TAACACTGCAAGACATTGTGAACAGTGAAATTGAATCCAACACAACCAAA
GCTAAAAATTCCGCCACTGACGCTTTGTTATGGTTAAAAAGATGTGTTAG
GGTCCACGGCATTTGCACCAGTCAAATCGGATATCAATGGAAACATTGCT
ATGTCTTCATTCTTTGGCAAAGCTATCAACAAATACCAACCAATCCCAGA
AGATGGTAAAATCAACACTGATGCTTTTTTGAAAGCTTGCAGTGAAATTG
TCCCTTTCTTTGTTGGCAATGAAAGCGGTACCATATCGTAAAGATTTCAT
GAAATCTCTTGGTCCTGATACCACCGAGGATGTAGTCTTGGCTGAAATGA
AAGAAACTGTCACCACAATGGCTGCAAACATCGATCAATTGAACCAATTT
TATTTGGATACTAAACAAGATAGCTCACAAAAAGTTTAGGGCATTGTCTT
TTATCCGTGTTTTCTTGGAAGAAGTAATGACAGGCGAAGAGGATTTAGTG
AAGTGCGCCAAAAAAGCTTACGAAAATTCACTCAAACAATTTCACGGATG
GATGGTGCAAGGAATTTTCTCAAAATTACGTAAGAAGTATGACACTAATC
AAGAGAAATTTATAACACTGCAAGACATTGTGAACAGTGAAATTGAATCC
AACACAACCAAAGCTAAAAATTCCGCCACTGACGCTTTGTTATGGTTAAA
AAGATGTGTTAGGGTCCACGGCATTTGCACCAGTCAAATCGGATATCAAT
GGAAACATTGCTATGTCTTCATTCTTTGGCAAAGCTATCAACAAATACCA
ACCAATCCCAGAAGATGGTAAAATCAACACTGATGCTTTTTTGAAAGCTT
GCAGTGAAATTGTCCCTTTCTTTGTTGGCAATGAAAGCGGTACCATATCG
TAAAGATTTCATGAAATCTCTTGGTCCTGATACCACCGAGGATGTAGTCT
TGGCTGAAATGAAAGAAACTGTCACCACAATGGCTGCAAACATCGATCAA
TTGAACCAATTTTATTTGGATACTAAACAAGATAGCTCACAAAAAGTTTA
GGGCATTGTCTTTTATCCGTGTTTTCTTGGAAGAAGTAATGACAGGCGAA
GAGGATTTAGTGAAGTGCGCCAAAAAAGCTTACGAAAATTCACTCAAACA
ATTTCACGGATGGATGGTGCAAGGAATTTTCTCAAAATTACGTAAGAAGT
ATGACACTAATCAAGAGAAATTTATAACACTGCAAGACATTGTGAACAGT
GAAATTGAATCCAACACAACCAAAGCTAAAAATTCCGCCACTGACGCTTT
GTTATGGTTAAAAAGATGTGTTAGGGTCCACGGCATTTGCACCAGTCAAA
TCGGATATCAATGGAAACATTGCTATGTCTTCATTCTTTGGCAAAGCTAT
CAACAAATACCAACCAATCCCAGAAGATGGTAAAATCAACACTGATGCTT
TTTTGAAAGCTTGCAGTGAAATTGTCCCTTTCTTTGTTGGCAATGAAAGC
GGTACCATATCGTAAAGATTTCATGAAATCTCTTGGTCCTGATACCACCG
AGGATGTAGTCTTGGCTGAAATGAAAGAAACTGTCACCACAATGGCTGCA
AACATCGATCAATTGAACCAATTTTATTTGGATACTAAACAAGATAGCTC
ACAAAAAGTTTAGGGCATTGTCTTTTATCCGTGTTTTCTTGGAAGAAGTA
ATGACAGGCGAAGAGGATTTAGTGAAGTGCGCCAAAAAAGCTTACGAAAA
TTCACTCAAACAATTTCACGGATGGATGGTGCAAGGAATTTTCTCAAAAT
TACGTAAGAAGTATGACACTAATCAAGAGAAATTTATAACACTGCAAGAC
ATTGTGAACAGTGAAATTGAATCCAACACAACCAAAGCTAAAAATTCCGC
CACTGACGCTTTGTTATGGTTAAAAAGATGTGTTAGGGTCCACGGCATTT
GCACCAGTCAAATCGGATATCAATGGAAACATTGCTATGTCTTCATTCTT
TGGCAAAGCTATCAACAAATACCAACCAATCCCAGAAGATGGTAAAATCA
ACACTGATGCTTTTTTGAAAGCTTGCAGTGAAATTGTCCCTTTCTTTGTT
GGCAATGAAAGCGGTACCATATCGTAAAGATTTCATGAAATCTCTTGGTC
CTGATACCACCGAGGATGTAGTCTTGGCTGAAATGAAAGAAACTGTCACC
ACAATGGCTGCAAACATCGATCAATTGAACCAATTTTATTTGGATACTAA
ACAAGATAGCTCACAAAAAGTTTAGGGCATTGTCTTTTATCCGTGTTTTC
TTGGAAGAAGTAATGACAGGCGAAGAGGATTTAGTGAAGTGCGCCAAAAA
AGCTTACGAAAATTCACTCAAACAATTTCACGGATGGATGGTGCAAGGAA
TTTTCTCAAAATTACGTAAGAAGTATGACACTAATCAAGAGAAATTTATA
ACACTGCAAGACATTGTGAACAGTGAAATTGAATCCAACACAACCAAAGC
TAAAAATTCCGCCACTGACGCTTTGTTATGGTTAAAAAGATGTGTTAGGG
TCCACGGCATTTGCACCAGTCAAATCGGATATCAATGGAAACATTGCTAT
GTCTTCATTCTTTGGCAAAGCTATCAACAAATACCAACCAATCCCAGAAG
ATGGTAAAATCAACACTGATGCTTTTTTGAAAGCTTGCAGTGAAATTGTC
CCTTTCTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043224XLOC_043224Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069361-exon-scaffold_498-1575043694:388143..388544TCONS_00069361-exon-scaffold_498-1575043694:388143..388544Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1575043694:386965..387125TCONS_00069361-exon-scaffold_498-1575043694:386965..387125Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1575043694:386350..386408TCONS_00069361-exon-scaffold_498-1575043694:386350..386408Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1575043694:384582..384712TCONS_00069361-exon-scaffold_498-1575043694:384582..384712Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1575043694:383118..383250TCONS_00069361-exon-scaffold_498-1575043694:383118..383250Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1575043694:380844..381830TCONS_00069361-exon-scaffold_498-1575043694:380844..381830Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1510915933:388143..388544TCONS_00069361-exon-scaffold_498-1510915933:388143..388544Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1510915933:386965..387125TCONS_00069361-exon-scaffold_498-1510915933:386965..387125Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1510915933:386350..386408TCONS_00069361-exon-scaffold_498-1510915933:386350..386408Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1510915933:384582..384712TCONS_00069361-exon-scaffold_498-1510915933:384582..384712Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1510915933:383118..383250TCONS_00069361-exon-scaffold_498-1510915933:383118..383250Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1510915933:380844..381830TCONS_00069361-exon-scaffold_498-1510915933:380844..381830Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1491911889:388143..388544TCONS_00069361-exon-scaffold_498-1491911889:388143..388544Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1491911889:386965..387125TCONS_00069361-exon-scaffold_498-1491911889:386965..387125Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1491911889:386350..386408TCONS_00069361-exon-scaffold_498-1491911889:386350..386408Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1491911889:384582..384712TCONS_00069361-exon-scaffold_498-1491911889:384582..384712Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1491911889:383118..383250TCONS_00069361-exon-scaffold_498-1491911889:383118..383250Clytia hemisphaericaexon
TCONS_00069361-exon-scaffold_498-1491911889:380844..381830TCONS_00069361-exon-scaffold_498-1491911889:380844..381830Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069361-proteinTCONS_00069361-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:380844..388544 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.5866	20.2916	24.3046	36.699	7.73085	4.72584	11.8202	13.1343	14.6783	16.2935	12.7818	10.9128	3.73347	2.31591	4.11507	3.7426	3.23853	4.32773	2.29961	3.36893	6.37932	6.68081	11.3811	11.8094	1.62583	5.38948	15.9113	10.4468	13.9827	12.5339
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014830Glycolipid_transfer_prot_dom
Vocabulary: Molecular Function
TermDefinition
GO:0017089glycolipid transporter activity
GO:0051861glycolipid binding
Vocabulary: Biological Process
TermDefinition
GO:0046836glycolipid transport
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046836 glycolipid transport
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051861 glycolipid binding
molecular_function GO:0017089 glycolipid transporter activity
Blast
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BLAST of TCONS_00069361 vs. Swiss-Prot (Human)
Match: GLTP (Glycolipid transfer protein OS=Homo sapiens GN=GLTP PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 4.567e-47
Identity = 88/200 (44.00%), Postives = 125/200 (62.50%), Query Frame = 2 
Query:  488 QPIPEDGKINTDAFLKACSEIVPFFDVLGSTAFAPVKSDINGNIAKLRKKYDTNQEKFITLQDIVNSEIESNTTK-AKNSATDALLWLKRALSFIRVFLEEVMTGEED-----LVKC-AKKAYENSLKQFHGWMVQGIFSLAMKAVPYRKDFMKSL--GPDTTEDVVLAEMKETVTTMAANIDQLNQFYLDTKQDSSQKV 1060
            +P+P D +I T  FL+A S + PFFD LGS  F P+K+DI+GNI K++  YDTN  KF TLQ+I+  E E    +  K  AT AL+WLKR L FI+VFL+ +  GE D     L++  A KAYE +LK++HGW+VQ IF  A+ A PY+ DF+K+L  G + TE+  L +++  +    A ID + + Y     + + KV
Sbjct:   10 KPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYTQMNAELNYKV 209
The following BLAST results are available for this feature:
BLAST of TCONS_00069361 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLTP4.567e-4744.00Glycolipid transfer protein OS=Homo sapiens GN=GLT... [more]
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