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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069454 ID=TCONS_00069454|Name=TCONS_00069454|organism=Clytia hemisphaerica|type=transcript|length=1431bp
CTGGCAAGGGCCTTCTGAAGTTCTGATAGAATGAGTTTGCGCATGCGCTC
GTCAAAAAAGCGATATTCCTGAAGGGAGTCTTTTCAACGCGTGCTCGCAT
TCGGTTAACAGCTGGGGAGGCAAGAAGAACTTTCTGGAGATAAAGGCCCA
CTTTCTACTTTCTTACAAGaatgaatcctgaaaaattaaagaaactcCAA
AATGAAGTCCGAATTGGAGGAAAAGGATCtcaaagaagaaagaagaaggt
TGTCCACAAAACTGCCACAACTGATGACAAAAAATTACAAgtcactttga
aaaaattaagtgtTAATCCCATACCTGGAATTGAAGAAGTCAACATGATC
AAAGATGATGGACAAGTCATTCACTTTAAAAACCCTAAAGTTCAAGCTTC
TCTTGGTGCAAACACATTTGCTGTGACTGGACCTTGTGAAAATAAACcTC
TTACTGATATGTTGCCAAGTATTTTGAACCAAATCGGGGCTGAAGGACTA
ACGAACCTGCGCAAACTTGCTGAACGAATGCCACAAACTCGACTCGAAAC
TGCCACTGAAAGTGACGACGTGCCAAcccTGGTTGAGAATTTCGATGAAC
CTTCGAAGAACGAAACGACTGCCGAACCCGAAGCGACTGCCGAAACGGAA
ACGAAGAACGAGCCATCTGAATCGACCGAAACGACCGACGCCAAAATTGA
AGAAGTGTCATAGTTTATGTGTAATCTTTTCTCCagaaacatttttcata
tacATATTTTTTCTCCTTCTTTTATTTTATCGGAATATCTATTTAACCTC
TAAAACATTGTCAAGAAGATTTATACGTGGGAGATTCTTCTCTAGCATTG
GGCTAAACTTAGGTGTACAAACTCAACGACTTTTAACGATAACGATACTT
AACTTTTATCCGTCCGTTTGTTCTGTATCTGatacccaaaatgtgatggt
gcccaattttcgaaaaaaaaagatttccgaAAATTCTGGAAATATGCCTG
AAAAACCTTGATTGTAGCAAATCCCGAATTGTGACAGTCGCCttttcgag
aaaaatattttccggccgaaaatatgTCGGAAATCGTCGTCTTAAAAGAT
TTTCATGGGTTTTTtcctaattatttttttttcacatcaaaacattgata
acattgcccaccatcaagcatagttatttgtcaataaaactgatttttga
agccgaaaCTGTTAATTGTCGTTTGTATCTTTCGTTTCGAGTGTAAAACT
CTACGGGATATCGGCTGCTGAAATATGCAAAATTTCCATCCTTGGAAAAT
GTTCCAAGTTTCCAGGTTGGATtatccattggattttatctgtgccaata
tattatggcactgattgtagaggCTCGTTTCGAACGATTAATTGGATCAG
ATGCAAACTTATTTTACAATAACTTTTCGAG Run BLAST on NCBI protein sequence of TCONS_00069454-protein >TCONS_00069454-protein ID=TCONS_00069454-protein|Name=TCONS_00069454-protein|organism=Clytia hemisphaerica|type=polypeptide|length=180bp
MNPEKLKKLQNEVRIGGKGSQRRKKKVVHKTATTDDKKLQVTLKKLSVNP
IPGIEEVNMIKDDGQVIHFKNPKVQASLGANTFAVTGPCENKPLTDMLPS
ILNQIGAEGLTNLRKLAERMPQTRLETATESDDVPTLVENFDEPSKNETT
AEPEATAETETKNEPSESTETTDAKIEEVS Run BLAST on NCBI transcript from alignment at scaffold_50:213795..226840+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069454 ID=TCONS_00069454|Name=TCONS_00069454|organism=Clytia hemisphaerica|type=transcript|length=13046bp|location=Sequence derived from alignment at scaffold_50:213795..226840+ (Clytia hemisphaerica)
CTGGCAAGGGCCTTCTGAAGTTCTGATAGAATGAGTTTGCGCATGCGCTC
GTCAAAAAAGCGATATTCCTGAAGGGAGTCTTTTCAACGCGTGCTCGCAT
TCGGTTAACAGCTGGGGAGGCAAGAAGAACTTTCTGGAGATAAAGGCCCA
CTTTCTACTTTCTTACAAGGTATGATAACAAAATTCAATTACAATCTTAC
TTAGTGTCTTCTTTTCATGAGGGGACTACTCgtgtgttttattttttcat
aaaaaagatcTCATTTTCTTTTACCGCCCTGACAGCTGATAATTAGGCTA
GGCCCACGTTCGTTTGGTTTTACAAATGCGAAATACagatgtctaaactt
ttcaataaatcTCTGGAACTAAcagactttttgaaattctgtaagaAAGT
TCAAACTCGTAAATAGTTTTACTATGCTTTGTGGAGAAATCGTAACCATT
AGTGAAATACTCATTCATCTAataccgtttaggagtctcgctattttcac
ggtactccattgcagaggccggtaaaaatggttggtaaaaatgcgcactt
tagtactgtgaaaggttagaggaatgtaaacattgtgaatttttttctct
cctttaaagagaatgatttaAGATATTTGaacatgatatcaatgataatt
ttataagtctctcctgaaaatttcacaaaaattcatcaagaggaaaagaa
gttatgattaaaaggagttctttacctaccgttttctgctatgtttcctt
atgagaaccagatgtttacctaccgtttttttacggaggagagtgaattt
tctgtggtcgctaaaatcaaaacaatggaaaattggattgacgcgtgcgc
agttgacactcctaaacggtgtattaaagattgaagacaaaaatttaccT
TGAGCACgaaaaatcaaagtccagacTCCAGGGAATGGAAATCCAAccaa
tttttttaactgataggtgttcgattatcgaaccacggaaaatatatatt
gatccagacgtccgcgctcgataggatcgatcatcggaacggctcgatga
cggatcgatatgtgatcgatggattacttaacttAACGATCCCGATAGGA
GAttgatggaagattcagccattaaaaagtcttgagtatcgatccttcgt
tgatccattatcgagctagtatttcaatcgagtataccgATTCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatt
cgtcatcgatcgttaatcgattcgtcatcgatcgttaatcgattcgtcat
cgatcgttaatcgatttgtcatcgatcgttaatcgatttgttatcgatcg
taaatcgggtatgagtcgataggcatagcgtcagcctgggtttaggtccc
aggcaaaatttaggtcccccccaaagatttatctctttgttagcccccag
gaattttgaccctagacaccttcaaaaaattgatccagtaaaaaagtttt
ttccaatgtaaattgcaTTCAGTTCCAAGTTAAGATAAATAACTTTGCAC
GCTTTCTACAAAAATATTGCGGCGCaggggaaaatttttcagattcatga
gcttcaatttgaggaattgaagccaactattacataggcgtacaaacttt
cgcgagcagaaacttttgcaaggacgaaaaattgcgaaattcacgacatt
tactttcgcggaTTTAACGGGAAAATatatttcgcgagcataaactttcg
cgaatcaagacgtagaattgagaattttcacacaaaaaatggcttagagg
gacaaatacttgttggattggcttgaaacaatTGTCCTTTGACTATTAGT
CTTaaagcaggctaaaaagtgacataaaagttacattttattcaaagttt
gaagatttACAAATcatctattttgtcaagaatttttcgcgagcataaac
tttcacgaatagcccttcctagaatttttaaatacatttactttagcgaa
aagggccaaaattcgcgaaaatcgcgaaagtttctactcgcgaaagtttg
tacgcctaaagtaagctgaattattttagcccccactttgagtgatgaga
ttttagcccCCCCAAGTACATCCCCCTAAAAAGTGGTGTACTTATagccc
cctccttttttgggaaaaatttagggTGTAACCCCCTCCCCCAACCAGCA
GGGGGGTTGACGCTATGATAGGTTCGataagatcgatgatagattgataa
ataagcaataactaatcataagctttaaaaaatcttgagtatcgatcctc
tatcgatctcctatccggatcgttaagtaatccatcgatcacatattgaT
CCGTCATcaagccgttccgatgatcgatccgtcatcgagcacGGACGTCT
GGATTGATTAGTTCAATAAAAGTACAGTTTCATGTATATGTTCAAGTTGT
TCGAAGAGTGTTCGAGCAGTATCTTATTGCTTTTCTGGGATCATTCTGCT
ATTTTTCTCAGGTATACTAGCCAAGATATTGTGAAAATGACGCACCAAAG
CTTCTTGGTTCGATTAAGTTCTGTAATATTGTCACAAGTCAATAATtatc
gtcaactgctctaactttggactatctgacaaaacatggggcggtcattc
agccaccatttcaccgaacctccaaagtcatttaattaacatacTGCGAA
TCGTAGATAGCAAATAATGCGAGTATGCTACTCGCACCAGGTAGGCTTTC
ACACCGCAAAAGTAACAAATCTTTTCAACGAGAAACATGTAATGTAAATG
CAACCACACACATTCCTGCAAGCGTCCAAACATTTCGCAGAcaatatcat
ccaccaggatacaagtgaaaattttcaatctacCGACTTACTCTTGGGTA
CCATAGCTGTAAcccccaggacattcttattccaaaccAACCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttattccaaaccccccccc
cccccccccgcttattaatttttggggaaatgtttttgaaagttcctcGC
TTTTGTCCTTGCTATATTagcctctttttcaaaaaatttccacccatgac
acttttattccaaccctgcttattaagttttgagagtTTTTCCAATCCCC
CAGCTTATTCCAATCACctcggctattaggtacccgagagtagatgGGGG
TTTAGTTATTATCATGGTAGGGTTCGGGGTGGAGCTCAAGATAACAATAT
AAGGGGGCATTTGTGAATTAAGACTTAACTTAGGATCCCATAGGGGTCTT
TGTAGGGGCACCAGTAGGTTTGGGAGCTGTCTTAATTAACGTCTGTAAAT
TGCACGCTGTTACACGCTATAAgaatttgtgaatgacagctttCTGTTGT
GTCTCATTGGGCCAAcccgaaaaaaattttgtttccgTTCCACCTGGTGA
TGAAAAAACACTCACCTGGCCAGccgcaaaataatttttttttgctaaat
ttcaatcccaaaactcgattttttaaagcactcgttagaagttaaaatga
tggtcttctttaccttaaatctgtagtaacttgacactgctacaggcttc
ggcataagaaaaattcacgtgtgatcatcccacgcctagattttgattta
tagtggTCTAGGCGTGCAAATACTTAACTTTTatcgtttatattttcaat
tgtgttACAATATCTCTAACAGGGCTcaaaataacggtcggacataggac
attgtccgacccaaatggcttcatgtccgacccaaaaatcataattttta
agctaaagcaaccctgatcggacattttgtccgacccacttgaaatggtt
atttcgagccttgctctaagaactggacactctttcattttgaatattta
tcttcaattgCTTGAGGCTCCAAACTGTGATTACGAAgggaacttttttg
agaaaaaagtagagtgagggaaacatttccccaattttttaaatcctcac
tttcttaatgtttctttttattttactcacaagtcagtatgattcctttt
ataaaaacaaagctgtttacttactgaaaagtccccactttgtgaatgtt
tctatttattttactcacaaatcagcatgattctttataaaaaccaagtt
gtatattaaaaaaacattcttaaaagttgagttgcaagcaagaattaaca
aaaacaatgcagggtttagtttgagatgaataaaatttcatttctataac
aTTGATCAGGATAAAACCTTCATTCAAAGTGGTTTCAAGGCGTGCATTTT
Acagtagaatataaaatatcacgtgcgataaactaaccctaaccctaacg
atGATTACGAAAAAACGCGGCCGGGTGATAAAGAAATAgattttcacccg
gccggtggacgggaaacaaaaacttttttcggGTTCGCCTTGGCACAAGC
GGATAGGCAtagggtttgtaaaccaaggttgcttgcatttggtggtttgA
GCCGGGGTCAGAGACCTGTACGGGCAAATCtcagaaaaatatttagaaaa
cagttagaaacacttgagaaagtcagaaaatcaggatagaagacaCAAAA
GTAGTAAATAGGGAGGAAATAggagaggatgcatcctggtggatgatatc
gtttgctaaCCTGTCCAAACACAGATATAAAAAAGTCCTGCAgaaaattg
tgagatctgttaTCAAAACTCTGTaactttgatttgaaatttgaatgtca
atcaatcgTGCACGCTAGAAAAAGTCTCTAAGAGAAAAATGACACAAAAA
ATGGCGTCAAGATGTGAGCAGCGTGAGTGAGATTGAATTGTTACTCTCCA
GTGCCTAATAAACGTTCAGACCAAAATAAACGCACAGGGGGGGGggataa
aattgaaattaataaacgtacaggcaagaaatcagagctaaaataaataa
aagtacaGGGAAAATCTACCAATTTCTCAAAAGTAGAGATCAAATTAAAC
GCTCAAATTTTTAGCAAGACTTAGAGTTTACTCGCAGCATAGCATTCGAA
ATCTCCACACTTCGTTTGAATGTAATTAAAGGCCTTTTTACACGTCTTAT
TTTTTCCAGTGAATCAGGCAATATTGGGTCAGAGAAAATAAACATACTGC
AGGAAAATtcctcaaaataaataaacatacaGGTCTtaataaggtgcgta
caggcgggaaatttgactAGGCACCAAGAGTAATTACTtcttcaaattat
gtactttttAAAGcgctttaaaaatacatttgatTGTGATTATGagatgg
tgaaagtttgattgatgaGCTTTTTGAAgtatcaaaactcaaaaaaagaa
gatacaCTCCAGAAATCAaccgtcccaagttagagcagttaacGGTACGG
TTTGTGTATGATTAAAACTAAGAATTGACCGTGAATTTCCAAACNccaaa
aacccccccccccccccctgcagaGTGGGGGGTGCACACTAAGAACACCC
TTACTCTTTGAGTCCTCCCTTTACATTTCCATCCAAGTGGctgtagcatg
aaggtagagcatccagctacagTGCAAGGTTGTGTGTTCGATCCccagct
gggtcataccaaagattcccaaaatggtacttgatgtctctctgcttgat
gcttagCAACTAAAGAGAtagatcaagggtaagtggagaaatccagggaa
aggagtggtgccctctcctaccttcgggtagacagctatagaaaagggag
ccttcagGTCGCCCTCAACTGTGGTCTCAAACTTACTTTACTACTTCTAT
TTTCTTGGCAAATATTGCCCCCACCCTCCCCTAAGTTGGCATCTTCAATG
CATCacaataaaatatctaaaagttGTATACCTATATATTATACTACAAT
TATGTGATGGTCAACTTAGTGTTAGTGTTTTGAGTACTCAGGTGAAAGCA
GCAGTCTAAGCTCGCCTACCCGCGCAGCACTGATGAAGGGAAATCCTAGG
AAgggcaaaaaaaatcaattaattcaaaataattgaaaaacagGTATTAT
GGTCCTTGTgcaaaaaaaagattaatttaCCATAATAGGTGAAGCACATT
CACCTTAAAATTGTTATTCTTGTGGTTTGTGAGATTAACATGTGACTTCA
TCAGCATTAAACatacaattttattttaacagaatgaatcctgaaaaatt
aaagaaactcCAAAATGAAGTCCGAATTGGAGGAAAAGGATCtcaaagaa
gaaagaagaaggtTGTCCACAAAACTGCCACAACTGATGACAAAAAATTA
CAAgtcactttgaaaaaattaagtgtTAATCCCATACCTGGAATTGAAGA
AGTCAACATGATCAAAGATGATGGACAAGTCATTCACTTTAAAAACCCTA
AAGGTCAGTGAAAGCAATTACAACTTCAAATGAAACCAATGGGACAAACA
GTGTCTCTAATTGAAACAttttaatgtaatgtaatgtgcCATTAAATTTT
ATggccatacagggggggggtggacgaatatttccagggggtaaaccGAT
AAGaaattccagggggtctaaaaagaaatgttttttcatttttccagggg
tgaacaactgattttagttcatccaccctcactttaagacataaaaagaa
ttttttccaagggttcttttacaaattttgccattttccagcaGGTATCT
AcacttttaaagaaatttgttttCGCTTGAAAAGGTTTGTCCGCCCCCct
ttatggaaattttatggaacagcccaatgttGATTTAACATTTTGCTTCA
GAGGGATGTAACTTTCTTactgtttttcatttttgaaaNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAGTG
TGCAGGGGGGGTCAAGGTCCCACCTAAAATTTCAGGTCCCAGCACTTGAG
AAACTCCCACCTGATAGTTGACTTTCCAAGTCCCACCTAAAGTAGGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCT
GCAGAGTGGGGGGTGCACACTAAGAACACCCTTACTCTTTGAGTCCTCCC
TTTACATTTCCATCCAAGTGGctgtagcatgaaggtagagcatccagcta
cagTGCAAGGTTGTGTGTTCGATCCccagctgggtcataccaaagattcc
caaaatggtacttgatgtctctctgcttgatgcttagCAACTAAAGAGAt
agatcaagggtaagtggagaaatccagggaaaggagtggtgccctctcct
accttcgggtagacagctatagaaaagggagccttcagGTCGCCCTCAAC
TGTGGTCTCAAACTTACTTTACTACTTCTATTTTCTTGGCAAATATTGCC
CCCACCCTCCCCTAAGTTGGCATCTTCAATGCATCacaataaaatatcta
aaagttGTATACCTATATATTATACTACAATTATGTGATGGTCAACTTAG
TGTTAGTGTTTTGAGTACTCAGGTGAAAGCAGCAGTCTAAGCTCGCCTAC
CCGCGCAGCACTGATGAAGGGAAATCCTAGGAAgggcaaaaaaaatcaat
taattcaaaataattgaaaaacagGTATTATGGTCCTTGTgcaaaaaaaa
gattaatttaCCATAATAGGTGAAGCACATTCACCTTAAAATTGTTATTC
TTGTGGTTTGTGAGATTAACATGTGACTTCATCAGCATTAAACatacaat
tttattttaacagaatgaatcctgaaaaattaaagaaactcCAAAATGAA
GTCCGAATTGGAGGAAAAGGATCtcaaagaagaaagaagaaggtTGTCCA
CAAAACTGCCACAACCGATGACAAAAAATTACAAgtcactttgaaaaaat
taagtgtTAATCCCATACCTGGAATTGAAGAAGTCAACATGATCAAAGAT
GATGGACAAGTCATTCACTTTAAAAACCCTAAAGGTCAGTGAAAGCAATT
ACAACTTCAAATGAAACCAATGGGACAAACAGTGTCTCTAATTGAAACAT
TTTAAtgtaatgggccattccatttcatGACCATACTGGTGGGTGGACga
atatttccagggggtctaaagaagtgtttttcatttttccagggggtaaa
aagttattattAAATTTCCAGGGGTGAACaactgattttagttcatcCAC
CCTCAATTTAAGAGATGAAAAGAATTATTTCCAAGGGTTCtattgcaaat
tttgccattttccagcaGGTATCTACACTTTCCGataaatttgttttcaa
ttGAAAAGGTTTGTCCGCCCCCctttatggaaattttatggaacagccca
atgttGATTTAACATTTTGCTTCAGAGGGATGTAACTTTCTCactgtttt
tcatttttgaaagtttcgaaatttatgAACTGCCATTTTTTGAACAGGCT
TTGTTTCGAAGCTACTGCGTGATTGATAGTTTTGTGTTTGAATGTGATTT
ATATTTTCCATGTTTTATCATCTATTCAGTTCAAGCTTCTCTTGGTGCAA
ACACATTTGCTGTGACTGGACCTTGTGAAAATAAACGTAAGTTGTTTTAA
TATACTTCTAATGTTTTATCTCTGTATGGTTGCAAAGTTAGAGGGGACCA
CCAGTTAACTATTATGATTATAGCTTGTTTTCCTTTCGTCCAGCTTTAGT
CGCTTTAATGGTAGTTTTAATCTGAAAGCATCAAGATGATTtaaatgttt
tacttttttcagcTCTTACTGATATGTTGCCAAGTATTTTGAACCAAATC
GTAAGTACTTTCTGCTTCAGTTTTTTCTGTGCAAATCATAATTTCCATTG
AATTACTGGGTAGTTTGAAAACCATGTAAGAAGTAGGAATTAACTCCTTG
TATTTTGTATTGTCTCTGTTTCCAGGGGGCTGAAGGACTAACGAACCTGC
GCAAACTTGCTGAACGAATGCCACAAACTCGACTCGAAACTGCCACTGAA
AGTGACGACGTGCCAAGTAAGTACCTTATTTTCCGATCCAATCTTTATGG
ACTCGAGTTAtatcatggaggtaataaaaaaattggagagtcaatgcctt
ttgttctattctgatttatcatcggaagcaaacagctttttggttgcttt
gggaataagatgattaattttgggtatactcgtgggaataattaagatga
atgaaaagacattacatttttaacaagtatattgacatacaatagccttg
tcatgaaaaattgaaaaaaacttcatataataagcacaatactccaaacC
TCTAGgagaagctgcccataaagccatcgatagatttaaaacagaattac
gtgttacgattaggaaccttgtatcgatcattttgtcagagtatgaaaac
cgctgcccacttagacgtgaagattttaagataagaaatttcaatgataa
tgtgatgcaatTCTCATTgttaacaaaatgccagcccaaaaatgtgtcct
tatgaaattaatatactcttttagtcttacatcagttgaaactatttcga
atcgcattttaagagggcttttcggcaaaattaagttttcaaaatcaacc
aaaaggtctctttatgttcttataaagttataaattgatgttttttgctt
ccaatgatggtacatcaaagaaaagccgctttgaatagatttataaaaga
tttcaacgaccatttagatcattaccgagacgttttctctccatctatat
ctttattaattattaattacCTCCATGTTTATATATCATTGAGTTTTGTA
AGTTCACCTGAATTTGCCATGCACAAATGATCAAGTCGACTTTAAATAAG
AATTTCGTTTAACGTCGCTCTTTGCTGACCGAATATTTATTTActtgaaa
tgaaattgtcacGGCCAGAGACCTACCGCCTAAACTACGCATATGTGCTT
ATGTCATAAAGTTAAACATCATTAGCTGTTTGTTATCATTGAGTTCTTAG
TCCTGAAGAGAGCTTGCATCTCCAGTCTTTGAAAAATGTCTTGCGTTTCA
AGGTCCATGTATTGAACCAGTTTGGAAATAGCAAATCTTATTGAGCAGct
ttttaatttagaaaattataTTTGGGTGGTTTTACTTCGAACGCACAAAA
CATATCGAATGAATAGTGGTCTTTTTTCACAAGGAACCTTTCGGTCTAAA
TTCAGCAACATAACATTGTTCTGATTTTGAAGGTAACTCTACCTGGCTAT
GTTGCCTTGAAATCAATCAAGttatttactttcattttcagcccTGGTTG
AGAATTTCGATGAACCTTCGAAGAACGAAACGACTGCCGAACCCGAAGCG
ACTGCCGAAACGGAAACGAAGAACGAGCCATCTGAATCGACCGAAACGAC
CGACGCCAAAATTGAAGAAGTGTCATAGTTTATGTGTAATCTTTTCTCCa
gaaacatttttcatatacATATTTTTTCTCCTTCTTTTATTTTATCGGAA
TATCTATTTAACCTCTAAAACATTGTCAAGAAGATTTATACGTGGGAGAT
TCTTCTCTAGCATTGGGCTAAACTTAGGTGTACAAACTCAACGACTTTTA
ACGATAACGATACTTAACTTTTATCCGTCCGTTTGTTCTGTATCTGatac
ccaaaatgtgatggtgcccaattttcgaaaaaaaaagatttccgaAAATT
CTGGAAATATGCCTGAAAAACCTTGATTGTAGCAAATCCCGAATTGTGAC
AGTCGCCttttcgagaaaaatattttccggccgaaaatatgTCGGAAATC
GTCGTCTTAAAAGATTTTCATGGGTTTTTtcctaattatttttttttcac
atcaaaacattgataacattgcccaccatcaagcatagttatttgtcaat
aaaactgatttttgaagccgaaaCTGTTAATTGTCGTTTGTATCTTTCGT
TTCGAGTGTAAAACTCTACGGGATATCGGCTGCTGAAATATGCAAAATTT
CCATCCTTGGAAAATGTTCCAAGTTTCCAGGTTGGATtatccattggatt
ttatctgtgccaatatattatggcactgattgtagaggCTCGTTTCGAAC
GATTAATTGGATCAGATGCAAACTTATTTTACAATAACTTTTCGAG Coding sequence (CDS) from alignment at scaffold_50:213795..226840+ >TCONS_00069454 ID=TCONS_00069454|Name=TCONS_00069454|organism=Clytia hemisphaerica|type=CDS|length=3258bp|location=Sequence derived from alignment at scaffold_50:213795..226840+ (Clytia hemisphaerica)
atgaatcctgaaaaattaaagaaactcCAAAATGAAGTCCGAATTGGAGG
AAAAGGATCtcaaagaagaaagaagaaggtTGTCCACAAAACTGCCACAA
CTGATGACAAAAAATTACAAgtcactttgaaaaaattaagtgtTAATCCC
ATACCTGGAATTGAAGAAGTCAACATGATCAAAGATGATGGACAAGTCAT
TCACTTTAAAAACCCTAAAGTTCAAGCTTCTCTTGGTGCAAACACATTTG
CTGTGACTGGACCTTGTGAAAATAAACcTCTTACTGATATGTTGCCAAGT
ATTTTGAACCAAATCGGGGCTGAAGGACTAACGAACCTGCGCAAACTTGC
TGAACGAATGCCACAAACTCGACTCGAAACTGCCACTGAAAGTGACGACG
TGCCAAcccTGGTTGAGAATTTCGATGAACCTTCGAAGAACGAAACGACT
GCCGAACCCGAAGCGACTGCCGAAACGGAAACGAAGAACGAGCCATCTGA
ATCGACCGAAACGACCGACGCCAAAATTGAAGAAGTGTCATAGatgaatc
ctgaaaaattaaagaaactcCAAAATGAAGTCCGAATTGGAGGAAAAGGA
TCtcaaagaagaaagaagaaggtTGTCCACAAAACTGCCACAACTGATGA
CAAAAAATTACAAgtcactttgaaaaaattaagtgtTAATCCCATACCTG
GAATTGAAGAAGTCAACATGATCAAAGATGATGGACAAGTCATTCACTTT
AAAAACCCTAAAGTTCAAGCTTCTCTTGGTGCAAACACATTTGCTGTGAC
TGGACCTTGTGAAAATAAACcTCTTACTGATATGTTGCCAAGTATTTTGA
ACCAAATCGGGGCTGAAGGACTAACGAACCTGCGCAAACTTGCTGAACGA
ATGCCACAAACTCGACTCGAAACTGCCACTGAAAGTGACGACGTGCCAAc
ccTGGTTGAGAATTTCGATGAACCTTCGAAGAACGAAACGACTGCCGAAC
CCGAAGCGACTGCCGAAACGGAAACGAAGAACGAGCCATCTGAATCGACC
GAAACGACCGACGCCAAAATTGAAGAAGTGTCATAGatgaatcctgaaaa
attaaagaaactcCAAAATGAAGTCCGAATTGGAGGAAAAGGATCtcaaa
gaagaaagaagaaggtTGTCCACAAAACTGCCACAACTGATGACAAAAAA
TTACAAgtcactttgaaaaaattaagtgtTAATCCCATACCTGGAATTGA
AGAAGTCAACATGATCAAAGATGATGGACAAGTCATTCACTTTAAAAACC
CTAAAGTTCAAGCTTCTCTTGGTGCAAACACATTTGCTGTGACTGGACCT
TGTGAAAATAAACcTCTTACTGATATGTTGCCAAGTATTTTGAACCAAAT
CGGGGCTGAAGGACTAACGAACCTGCGCAAACTTGCTGAACGAATGCCAC
AAACTCGACTCGAAACTGCCACTGAAAGTGACGACGTGCCAAcccTGGTT
GAGAATTTCGATGAACCTTCGAAGAACGAAACGACTGCCGAACCCGAAGC
GACTGCCGAAACGGAAACGAAGAACGAGCCATCTGAATCGACCGAAACGA
CCGACGCCAAAATTGAAGAAGTGTCATAGatgaatcctgaaaaattaaag
aaactcCAAAATGAAGTCCGAATTGGAGGAAAAGGATCtcaaagaagaaa
gaagaaggtTGTCCACAAAACTGCCACAACTGATGACAAAAAATTACAAg
tcactttgaaaaaattaagtgtTAATCCCATACCTGGAATTGAAGAAGTC
AACATGATCAAAGATGATGGACAAGTCATTCACTTTAAAAACCCTAAAGT
TCAAGCTTCTCTTGGTGCAAACACATTTGCTGTGACTGGACCTTGTGAAA
ATAAACcTCTTACTGATATGTTGCCAAGTATTTTGAACCAAATCGGGGCT
GAAGGACTAACGAACCTGCGCAAACTTGCTGAACGAATGCCACAAACTCG
ACTCGAAACTGCCACTGAAAGTGACGACGTGCCAAcccTGGTTGAGAATT
TCGATGAACCTTCGAAGAACGAAACGACTGCCGAACCCGAAGCGACTGCC
GAAACGGAAACGAAGAACGAGCCATCTGAATCGACCGAAACGACCGACGC
CAAAATTGAAGAAGTGTCATAGatgaatcctgaaaaattaaagaaactcC
AAAATGAAGTCCGAATTGGAGGAAAAGGATCtcaaagaagaaagaagaag
gtTGTCCACAAAACTGCCACAACTGATGACAAAAAATTACAAgtcacttt
gaaaaaattaagtgtTAATCCCATACCTGGAATTGAAGAAGTCAACATGA
TCAAAGATGATGGACAAGTCATTCACTTTAAAAACCCTAAAGTTCAAGCT
TCTCTTGGTGCAAACACATTTGCTGTGACTGGACCTTGTGAAAATAAACc
TCTTACTGATATGTTGCCAAGTATTTTGAACCAAATCGGGGCTGAAGGAC
TAACGAACCTGCGCAAACTTGCTGAACGAATGCCACAAACTCGACTCGAA
ACTGCCACTGAAAGTGACGACGTGCCAAcccTGGTTGAGAATTTCGATGA
ACCTTCGAAGAACGAAACGACTGCCGAACCCGAAGCGACTGCCGAAACGG
AAACGAAGAACGAGCCATCTGAATCGACCGAAACGACCGACGCCAAAATT
GAAGAAGTGTCATAGatgaatcctgaaaaattaaagaaactcCAAAATGA
AGTCCGAATTGGAGGAAAAGGATCtcaaagaagaaagaagaaggtTGTCC
ACAAAACTGCCACAACTGATGACAAAAAATTACAAgtcactttgaaaaaa
ttaagtgtTAATCCCATACCTGGAATTGAAGAAGTCAACATGATCAAAGA
TGATGGACAAGTCATTCACTTTAAAAACCCTAAAGTTCAAGCTTCTCTTG
GTGCAAACACATTTGCTGTGACTGGACCTTGTGAAAATAAACcTCTTACT
GATATGTTGCCAAGTATTTTGAACCAAATCGGGGCTGAAGGACTAACGAA
CCTGCGCAAACTTGCTGAACGAATGCCACAAACTCGACTCGAAACTGCCA
CTGAAAGTGACGACGTGCCAAcccTGGTTGAGAATTTCGATGAACCTTCG
AAGAACGAAACGACTGCCGAACCCGAAGCGACTGCCGAAACGGAAACGAA
GAACGAGCCATCTGAATCGACCGAAACGACCGACGCCAAAATTGAAGAAG
TGTCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069454-exon-scaffold_50-1491911889:213795..213963 | TCONS_00069454-exon-scaffold_50-1491911889:213795..213963 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1510915933:213795..213963 | TCONS_00069454-exon-scaffold_50-1510915933:213795..213963 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1575043694:213795..213963 | TCONS_00069454-exon-scaffold_50-1575043694:213795..213963 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1491911889:220027..220201 | TCONS_00069454-exon-scaffold_50-1491911889:220027..220201 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1510915933:220027..220201 | TCONS_00069454-exon-scaffold_50-1510915933:220027..220201 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1575043694:220027..220201 | TCONS_00069454-exon-scaffold_50-1575043694:220027..220201 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1491911889:223633..223678 | TCONS_00069454-exon-scaffold_50-1491911889:223633..223678 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1510915933:223633..223678 | TCONS_00069454-exon-scaffold_50-1510915933:223633..223678 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1575043694:223633..223678 | TCONS_00069454-exon-scaffold_50-1575043694:223633..223678 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1491911889:224224..224280 | TCONS_00069454-exon-scaffold_50-1491911889:224224..224280 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1510915933:224224..224280 | TCONS_00069454-exon-scaffold_50-1510915933:224224..224280 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1575043694:224224..224280 | TCONS_00069454-exon-scaffold_50-1575043694:224224..224280 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1491911889:224457..224494 | TCONS_00069454-exon-scaffold_50-1491911889:224457..224494 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1510915933:224457..224494 | TCONS_00069454-exon-scaffold_50-1510915933:224457..224494 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1575043694:224457..224494 | TCONS_00069454-exon-scaffold_50-1575043694:224457..224494 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1491911889:224620..224710 | TCONS_00069454-exon-scaffold_50-1491911889:224620..224710 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1510915933:224620..224710 | TCONS_00069454-exon-scaffold_50-1510915933:224620..224710 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1575043694:224620..224710 | TCONS_00069454-exon-scaffold_50-1575043694:224620..224710 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1491911889:225986..226840 | TCONS_00069454-exon-scaffold_50-1491911889:225986..226840 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1510915933:225986..226840 | TCONS_00069454-exon-scaffold_50-1510915933:225986..226840 | Clytia hemisphaerica | exon |
| TCONS_00069454-exon-scaffold_50-1575043694:225986..226840 | TCONS_00069454-exon-scaffold_50-1575043694:225986..226840 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_50 | supercontig | scaffold_50:213795..226840 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002715 | Nas_poly-pep-assoc_cplx_dom |
Blast
BLAST of TCONS_00069454 vs. Swiss-Prot (Human)
Match: BT3L4 (Transcription factor BTF3 homolog 4 OS=Homo sapiens GN=BTF3L4 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 2.185e-61 Identity = 105/153 (68.63%), Postives = 121/153 (79.08%), Query Frame = 3
Query: 171 MNPEKLKKLQNEVRIGGKGSQRRKKKVVHKTATTDDKKLQVTLKKLSVNPIPGIEEVNMIKDDGQVIHFKNPKVQASLGANTFAVTGPCENKPLTDMLPSILNQIGAEGLTNLRKLAERMPQTRLET--------ATESDDVPTLVENFDEPS 605
MN EKL KLQ +VRIGGKG+ RRKKKVVH+TAT DDKKLQ +LKKL+VN I GIEEVNMIKDDG VIHF NPKVQASL ANTFA+TG E KP+T+MLP IL+Q+GA+ LT+LRKLAE+ P+ L++ E DDVP LVENFDE S
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLVENFDEAS 153
The following BLAST results are available for this feature:
|
