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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069656 ID=TCONS_00069656|Name=TCONS_00069656|organism=Clytia hemisphaerica|type=transcript|length=1980bp
GTTCTTTCTTGTTTTGTGTCTGAGGCCTTTAATTCTGGAGaattaataaa
taaatgaatttattttcgtttcgcagataagaaaataaaggtTTATTACA
TCAAACGTAATATATCATGAAATTTAACTACAATCTctcattttttcata
tttacaacaaagtcattaaaataatgtATCAATATTTAAACCATAAGGAA
CGTAACTTTATAAAGTAGAAAATTATACATGAACAAAGTTTGATCCGGGT
AGTTATATGCTGCATACCCGGTTGTGTAACTATAGAGTAGATCAGCTCCA
TAATACTAAAGTATGATTCGGCTATGACATATCTTTACCATGAATTTTCA
GAGCACATTAGCCGATTGAAAAAGTTATAAAGAAGAAAACTATTGATGAA
AAAGTTTGAACCAGGTGGATGTATGATGCATACCCGATTAAACTATACTG
ACAACCCTAATCATCgactgattttcattttttacatttttgggaACATG
TGATAATTTATTTAAGTGTCTACATACTTTTGTGACAGACTTTGAAAGAT
TTACCATATTCGGGAAGCATCTTCATTGtatctttttatgtttttgccAC
CTACTCATTACGTATGCCATGTCTTTTGACATCACGGACCCTAAAGCTAA
TTGTTTGTAATTGACGTAAAATTAgttaatacgtcacttgcaaccaatca
gcttttgGGTCTGTGGaggacattgcaatggtgtataTCTTAAATAAACG
GTTTTGAATATTGTTTACTTTGCGTTTTCCAATCACCATTCTTAATCTCC
GGTGAAGGTGTTATTATCGTCACCCGTTGTGCTttcttgcaatttttctt
tcttgCCTGCTGGTTTGAAAAGCATTGTCaaattcatttcttttttatca
CTGGTCAAAATGGTGTAGTAGATATCAATAACTTCTCAACCAATTGTATT
TGGTAATGTCCAGTTTGTAGTTTTGAGAATTTCTATTTCGAAAACATTCT
CTCGAAATGTATAATATAATTGCCAACCTCATTCTCAAAGACTTGTTGCT
GCGATTCTTCAATGTCGCCAGACATAATAAATGTTTGCAAGCATTTTTGC
TTttgtatcaaaattgaaaacggTCTTTTGGGACAAGATATTGAATGTCG
TTTGAAGTAATAATTTCACTTGAAAACGAGGCCTACAATGACGTTGATTC
ATCTCGAGAAGTATTGAATGTCCACCATCCACCATCCCTACATTTGATTC
AATATGACCGGGTTCAGTTCTCTCTCGACCACATCATCTCCAAGAATATA
CACAAGAAATCCTTTCCCATTAATCAGCAATTTCCATATGAGTAGTCCCC
TGGTCACTGGTTGAAGATTCTAACTTTGTTTTCACAATATCTCTTCCTTC
TTCTTCAATAACGCTCAAACGAATTTTATGTTTCTTAACAATCTTTTCAA
CGCGGCCTAATACCTCATCGCTGTTCTTTAGCTTTATACCAATAGAATGT
ACTTTACGGTCAATCTTAGCTTTAAAAGTTAAGTAGGAATCTGGTAAAGA
GGGACAGCAGGGTACAGCTACTTGGCAATTACTACCAAAAGATAGTTCTG
ATTCTAGCTCCTTCAGTTTAGCAAGTCTGAACTCGATACGATGACATCCG
AAACATTGAGTAGAATGAATAAGTTTCCGATCTGTGATGAACAGGGTACC
ACCAGGTAGATTTTGTTGGACGTTACCACGAAGTAAAGTCAGACCACCTG
TTTGGAATCTTAACATGAGGTGGCCATCTCCTTCTTCTAAAACATTCTCT
GGCGATATCAACCGTGGAAAACAACAACCCATCTTGAGTGACGTTCGATT
TGAATATGCTACTTCTtcgtttttaatttgttttactTCTGAAAGAAACA
AATTAAGATCAGATTAAGAGTGTTGGACAataagtactagtaatcgtata
gtttggagtgcaattaacgattaatcacga Run BLAST on NCBI protein sequence of TCONS_00069656-protein >TCONS_00069656-protein ID=TCONS_00069656-protein|Name=TCONS_00069656-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MGCCFPRLISPENVLEEGDGHLMLRFQTGGLTLLRGNVQQNLPGGTLFIT
DRKLIHSTQCFGCHRIEFRLAKLKELESELSFGSNCQVAVPCCPSLPDSY
LTFKAKIDRKVHSIGIKLKNSDEVLGRVEKIVKKHKIRLSVIEEEGRDIV
KTKLESSTSDQGTTHMEIAD Run BLAST on NCBI transcript from alignment at scaffold_503:181481..183460 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069656 ID=TCONS_00069656|Name=TCONS_00069656|organism=Clytia hemisphaerica|type=transcript|length=1980bp|location=Sequence derived from alignment at scaffold_503:181481..183460 (Clytia hemisphaerica)
tcgtgattaatcgttaattgcactccaaactatacgattactagtactta
tTGTCCAACACTCTTAATCTGATCTTAATTTGTTTCTTTCAGAagtaaaa
caaattaaaaacgaAGAAGTAGCATATTCAAATCGAACGTCACTCAAGAT
GGGTTGTTGTTTTCCACGGTTGATATCGCCAGAGAATGTTTTAGAAGAAG
GAGATGGCCACCTCATGTTAAGATTCCAAACAGGTGGTCTGACTTTACTT
CGTGGTAACGTCCAACAAAATCTACCTGGTGGTACCCTGTTCATCACAGA
TCGGAAACTTATTCATTCTACTCAATGTTTCGGATGTCATCGTATCGAGT
TCAGACTTGCTAAACTGAAGGAGCTAGAATCAGAACTATCTTTTGGTAGT
AATTGCCAAGTAGCTGTACCCTGCTGTCCCTCTTTACCAGATTCCTACTT
AACTTTTAAAGCTAAGATTGACCGTAAAGTACATTCTATTGGTATAAAGC
TAAAGAACAGCGATGAGGTATTAGGCCGCGTTGAAAAGATTGTTAAGAAA
CATAAAATTCGTTTGAGCGTTATTGAAGAAGAAGGAAGAGATATTGTGAA
AACAAAGTTAGAATCTTCAACCAGTGACCAGGGGACTACTCATATGGAAA
TTGCTGATTAATGGGAAAGGATTTCTTGTGTATATTCTTGGAGATGATGT
GGTCGAGAGAGAACTGAACCCGGTCATATTGAATCAAATGTAGGGATGGT
GGATGGTGGACATTCAATACTTCTCGAGATGAATCAACGTCATTGTAGGC
CTCGTTTTCAAGTGAAATTATTACTTCAAACGACATTCAATATCTTGTCC
CAAAAGAccgttttcaattttgatacaaAAGCAAAAATGCTTGCAAACAT
TTATTATGTCTGGCGACATTGAAGAATCGCAGCAACAAGTCTTTGAGAAT
GAGGTTGGCAATTATATTATACATTTCGAGAGAATGTTTTCGAAATAGAA
ATTCTCAAAACTACAAACTGGACATTACCAAATACAATTGGTTGAGAAGT
TATTGATATCTACTACACCATTTTGACCAGtgataaaaaagaaatgaatt
tGACAATGCTTTTCAAACCAGCAGGcaagaaagaaaaattgcaagaaAGC
ACAACGGGTGACGATAATAACACCTTCACCGGAGATTAAGAATGGTGATT
GGAAAACGCAAAGTAAACAATATTCAAAACCGTTTATTTAAGAtatacac
cattgcaatgtcctCCACAGACCcaaaagctgattggttgcaagtgacgt
attaacTAATTTTACGTCAATTACAAACAATTAGCTTTAGGGTCCGTGAT
GTCAAAAGACATGGCATACGTAATGAGTAGGTggcaaaaacataaaaaga
taCAATGAAGATGCTTCCCGAATATGGTAAATCTTTCAAAGTCTGTCACA
AAAGTATGTAGACACTTAAATAAATTATCACATGTtcccaaaaatgtaaa
aaatgaaaatcagtcGATGATTAGGGTTGTCAGTATAGTTTAATCGGGTA
TGCATCATACATCCACCTGGTTCAAACTTTTTCATCAATAGTTTTCTTCT
TTATAACTTTTTCAATCGGCTAATGTGCTCTGAAAATTCATGGTAAAGAT
ATGTCATAGCCGAATCATACTTTAGTATTATGGAGCTGATCTACTCTATA
GTTACACAACCGGGTATGCAGCATATAACTACCCGGATCAAACTTTGTTC
ATGTATAATTTTCTACTTTATAAAGTTACGTTCCTTATGGTTTAAATATT
GATacattattttaatgactttgttgtaaatatgaaaaaatgagAGATTG
TAGTTAAATTTCATGATATATTACGTTTGATGTAATAAacctttattttc
ttatctgcgaaacgaaaataaattcatttatttattaattCTCCAGAATT
AAAGGCCTCAGACACAAAACAAGAAAGAAC Coding sequence (CDS) from alignment at scaffold_503:181481..183460 >TCONS_00069656 ID=TCONS_00069656|Name=TCONS_00069656|organism=Clytia hemisphaerica|type=CDS|length=513bp|location=Sequence derived from alignment at scaffold_503:181481..183460 (Clytia hemisphaerica)
ATGGGTTGTTGTTTTCCACGGTTGATATCGCCAGAGAATGTTTTAGAAGA
AGGAGATGGCCACCTCATGTTAAGATTCCAAACAGGTGGTCTGACTTTAC
TTCGTGGTAACGTCCAACAAAATCTACCTGGTGGTACCCTGTTCATCACA
GATCGGAAACTTATTCATTCTACTCAATGTTTCGGATGTCATCGTATCGA
GTTCAGACTTGCTAAACTGAAGGAGCTAGAATCAGAACTATCTTTTGGTA
GTAATTGCCAAGTAGCTGTACCCTGCTGTCCCTCTTTACCAGATTCCTAC
TTAACTTTTAAAGCTAAGATTGACCGTAAAGTACATTCTATTGGTATAAA
GCTAAAGAACAGCGATGAGGTATTAGGCCGCGTTGAAAAGATTGTTAAGA
AACATAAAATTCGTTTGAGCGTTATTGAAGAAGAAGGAAGAGATATTGTG
AAAACAAAGTTAGAATCTTCAACCAGTGACCAGGGGACTACTCATATGGA
AATTGCTGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069656-exon-scaffold_503-1491911889:181481..183460 | TCONS_00069656-exon-scaffold_503-1491911889:181481..183460 | Clytia hemisphaerica | exon |
| TCONS_00069656-exon-scaffold_503-1510915933:181481..183460 | TCONS_00069656-exon-scaffold_503-1510915933:181481..183460 | Clytia hemisphaerica | exon |
| TCONS_00069656-exon-scaffold_503-1575043694:181481..183460 | TCONS_00069656-exon-scaffold_503-1575043694:181481..183460 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_503 | supercontig | scaffold_503:181481..183460 . |
Blast
The following BLAST results are available for this feature:
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