TCONS_00069671 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069671
Unique NameTCONS_00069671
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2856

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069671 ID=TCONS_00069671|Name=TCONS_00069671|organism=Clytia hemisphaerica|type=transcript|length=2856bp
ACCACATTAGAAATTGCCGGATGTCATTCGATCAAAAGATACGAGGTAAT
TGTCACGCACCTTAATTATACCACTTCAAAATTTTGCTATATTTAAAAAG
TCATAGATTGGGATTTGTTATTTCATCACTTCATATGAATCTGTGACAGT
TGACAGTTGCAAGTATTTTTTCTTGTTGTGATACAGACAACGTATTTTAG
AGTgattttgagagatttttttaaGAGAACGAAAAGATGGAGTTGGAGCA
ATTCGAGTTAATCGATGGTGATGAAACAAgGTCGAAGGAGGATTCCTTCA
AATTCACCATGACGCAACTTCAACAACGTCATCCGTCCGTCACTAAACCG
TTCCAAGAAGAATTCGTCGACGTTAACATCAAAAATGGATTCTTCGACGC
TGCCAACAAAATGAGACGACAagGTGTTTTGACAGACGTATCGCTAGTTG
TTGATCAACAAACCTTTCACACTCATAAACTGATATTATGTTCATGCAGT
GATTATTTTACTAGCATGTTTAACGGTCCTTTGGCGCATCACGGCCAACA
AGTCTTCATATCGGGCGTCAGTGCCCAAAGCATGGAAGCTATTTTGAATT
ACGTTTATACGGGATCGATTATCATCAACGAGGAGTTTATACAAGACATT
TTAGAAGCAGCTtgtttgtttctattgaaaaactTACGCGAACGATGCGC
GCGATTTCTGCGCGACCGATTAGATGGTGGCAATTGTTTACAGATTTTCA
GTATCGCTAAAAGTTGTTCATTGTTGGCTTTGATGGAGGATTCCCTAGAG
TTCATCTCCGCGATCTTTCAAGATATTTCAGCGCTGAATGATTTTAAACA
ATTAAGTTTTGATGAACTTATTGATGTATTATCTCTTGAAGATTTAGCAG
TGCCAAGTGAAGATTACGTTTTAGAGGCAGCATTTCGATGGTTAAATCAT
GATTTATAcggacgtcagcaaaaatttgtaGAAGTGCTAAAAGCTATACA
TTTACCATACGTTAGTGACGATATGTTAAAACAGGTCATGGAGAATGAAA
AATCTTTACGTACTTTTCCTGAGCTGGAAATTCTCTTCCGTTCCGCCTTA
CGTCTTACCGTTGAAAACTGGACTCTCTCCAAAGACAGTGATTTTAATTT
ACTCCAACCAAAATCATGGATAAATCCACGAAAATGTATTCAATGTATAC
CGAGTCTTATCGCTATGGGTGGGCCTACATTGAACTTATTTAACAGCGAA
CTTGGAAAATGGTGTGAAATAACGAAATGTAAACCACGGCATTGTCCAGG
TATGGATGTTGTTGGGTCCACTATCTATGTTGTAGGTGGTTCACTGGAAT
GGAAACGAAAACGTACTGGAGAGTATTACAACACTGAGAAAAATGAATGG
ATCCCAATGGCGGATATGCACACACCACGAAGTAATTTCGGTCTCGTCAA
TTTGGAAGGGAAACTGTATGCTATCGGTGGTTATGATGGGAATTTCCCTT
TAAAATCAGCAGAGGTTTATGATCCACGTACCAACCAATGGACGCAAATC
TCCGACATGACGACGGCAAGAGACGGCGCATGTAATGTGTCGGACGGCGA
ATCGATTTACGTGATTGGAGGATACGACGGCCACGAATACAGACTGACGA
CAGAAGTTTATAAACCAGAAACTGGTCTATGGGATATCAGTTCTATTCCA
GAGACATCAGTGCAACGTCAGAACGCGATGTGTGTATACTTTGATTCGAG
TATTTACATTATTGGTGGTTACCATGGAGATACTTATCATTCATCGATGG
AAGTATTAGACCTGGAAACGAACGAATGGTCTTTTTCAAGCCCCTTAAGT
GCACCAAGACATCACGCAGGCGCCGCTGCCATGAATGGAAACATTTACAT
TTGTGGTGGTTGGAGTGCACATATTCCCGTCAGCCACGTTGACGTCTACT
CTATCGCTCAAGATACGTGGCGTCGCGTTTCGCCTCTTCCCACACCAACA
ATGATTCGCTCAGTAGCGGTTAACTTCCCACGAAAATGCATCTTGAATTT
ATTCGCTAACTCAAACAGTGATATGGCGGCTTATCGTGCGTCAAGAATAC
GCTCCTTGCGTTCCATCTCGGAGTCATCTTCTTCAGGTAATGAGAAAACA
CAAACAGAAGCTGAAGCTTTTTTGACTTCCTCGACTGATGAGTAGAATCT
TGATTTTGTGTTAATATTTATTTCATGCTTTGAGTATATATTACCCTTTC
TAATCGGTCTCTTGAATCAAGAAACTTGATGAAGCTTGGCAAAGTAAGTC
TCTCAGTTCGcccatttttttaacaatataGTGTAGCACCTAATATGGAT
ACCATACTAGCAAATAGCACGAAATCATTAACTACCCAACAAGCAGTTTT
AAGGTGCGTTTGAAAAATGTCTTGGGTAAAAAGCTTCGAGGGATCTTATA
ACATTTATATTTCTTATGAACTTTCATTTTGTATTGTATATAATTTATTA
AAATTGAAACGTTTTTATAcaattaacatattttgaagtttaattttctt
caattttcgtTTTTGTAAATACGATACCAAAAGTATCAGGgacaaatttc
atttttggtgACAACTTTTATGAAGATTCTCCTGCATCGCCTGTTTTGTT
TCTAGATGATCTTCAAAATGACAAAGCTCTTCTATAGCCGACCATTGTCC
CCCCACCTCCAAAgcaaattttcccaaaaattagtGTCTTTTCATTCCCT
TTGCTTTTTTGTATTAATTTTTTGCCTTTTGTAAAATAGAATATGATGAA
TATATTTTGTGTTACTTGATATTCAAATAAGATTGACAGTATTAACTACT
AAAGAA
Run BLAST on NCBI

transcript from alignment at scaffold_505:39934..54219+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069671 ID=TCONS_00069671|Name=TCONS_00069671|organism=Clytia hemisphaerica|type=transcript|length=14286bp|location=Sequence derived from alignment at scaffold_505:39934..54219+ (Clytia hemisphaerica)
ACCACATTAGAAATTGCCGGATGTCATTCGATCAAAAGATACGAGGTAAT
TGTCACGCACCTTAATTATACCACTTCAAAATTTTGCTATATTTAAAAAG
TCATAGATTGGGATTTGTTATTTCATCACTTCATATGAATCTGTGACAGT
TGACAGTTGCAAGTATTTTTTCTTGTTGTGATACAGACAACGTATTTTAG
AGTgattttgagagatttttttaaGAGAACGAAAAGATGGAGTTGGAGCA
ATTCGAGTTAATCGATGGTGATGAAACAAggtaaagttttctttttgtct
CCATCTCCCCTAGACTCTAGAGGGctccattttcatgaaatttccaAAGC
GTAGGGGAGAGTTGATGCAAAATATATtcatttttaattcatttttgtgG
AGGACGCTATCAGTTTTATTGTTGTCTTTTGCACCCTTGTTTCACGTcct
cggtggaactttttcccacagcggTGCACAGCAGTGATataaatttctat
cgaaatcccgatggggatagaaattctattgtttccagctcaaaaaatgc
agtggggtggttttggagtgcaatcttttacattaatttaaattgggatg
aaaaaaaagtcagatacctagtggggctgaaattgaaGGGTATTTTCCCA
TCTGAGACgttattttgaccaaattttcctGTGTGCCAGGGGCCCCACcg
agtctgtgacacagggttgtttttattttgtctcaAGTTATAATATCACT
CGGTCATTGACAGTAGAGATCACTTATAAGTAAACAGGAATTTGTTTGGA
TCAGTTTTCAAGCACTTCAAATTGTATTCAAAGTACCTCCTCGACCTTTT
CAAAACGGAAGTTATTGATAGCGCTAAGCTGAAACACGATCTTTCATTCG
TATTCTGGAAAAACAGGATGTTCAAAACCAGATCTTTAGATGATAGTTTC
TCATTTACAGCAAGGATCGAAGGGAACACTATTAATTTTAAGAATTTGCT
TGCAGTTTCTTTGCGGAGAAAATCATGTATGTATaaagtgtttcttttta
ttttgtttttccttgCTAATTTTTTAATGATACTAATTTTGCATTCTGCA
TCAACGACAGGTCACTTGCCTTGAGTACCCCTCCCCCGGTGGATTAATAC
GCAAGCTTcgtttgcgaatgtttgcattAACTCTTTGATGCTTTTCAAGT
GCTTCTAATTGTTGTCATTCTGTTTTATTTCTATTCGAAATATCTGGAAG
AGGTAAATTTCAAATTGACCAGTTTGTGAATAAAGGGTTTTTTATGATCG
TGTTAATTAACGCTGATAATTGTTGTCTTTATATTATTCCAGTAGACtaa
atttgttgatttttgtaAGGGCGTATTCCATTCCATAATCAAGTTAAAAC
AATGTAGTAACTCGGAATATCTAGATGAACTTTCATACTTTCTATTTTGA
GGTGTATACAAGCCTTTTTATTTGTTTCGTAAAGCAAATCTATTTTGATA
AAGCTCTGTTAACATACTTTGACAAAGGGAATTTCAATATGgtttataca
cgtttttataagaacaaactgtataagaacataaggcttcgatggacaaa
atgttaagaacaaNagaacaaactgtataagaacataactcTTCGATgga
caaaatgttaagaacaagttaagaactttttaaggctttgcggactcaaa
ACACacgttttcttaggaaaatgggtaaaaatggtcacaaaatggttaag
aacattttgaggcttcaaaacttttggatgttcttatagaatAATGTGTA
GTTAGATTTAGACTTATCTTATTATAAGTAGGTGCATGCTTAATTTGGTT
AAAGACTTAAGCTGCTGGcataaattagatttattgtAAACAGAAATGGG
TATTGTCTTGggacaatgatttttttcttgtgcTCTGTATTCCTGTATAG
TGCCATACAGCACGaattttcgtgggtcacccttATGTCCTTGTGTCACG
GGGGGCCGGGGGGCCGTAGAAGAAATTCACTTGATTTGATTTCAGAAAGC
TAGAGATGATAGAATTACATAGatatcaaataaaagaaaaagggaGATAT
TAATAATAAATGTTTGATAAGCCTTTTCATTGAACCGAGTTTCGTCTCTC
AATATATGAGAATATATCAATCGAAAACTGTGAATGAAAATATGATCAGT
TGATAAAAAACTCGCTGgagaaaacatcaaaaaatatatttctcagAAGA
AAGAGATTGTCTATATATATTTTGGTGTGTTGAAAGGAAACGTTTCTgaa
attttagttttgttttttttgtggggAAAGATGGCTGTTGAGAGAGCAGA
GGAACTCCGGTTGTTTTGCCCGACCGAACCATTGGCCAAAATGATGAGAG
GAGATGTAAGGTAAGGATGTTCCTTTATCATTATGGACATATGACTTGAT
ATTTCTGGGATCTAAGGTTCTGACTTGATTTTTCCCGTTCGAGACCGTGT
AGTGtctttcgctagcgattttacAGCAAAAGTTCGATTTGTTTTGGGCC
TAGGATATAGTAGAAGCTTCTTTGTAAGCCTTCgactgaatttcaaaatt
ctttccaaatttaagaaattctaataattatttctattttgggCCTCCTT
ATTTCCGATAGCCTGAATAAGTCACGCACGATCTCACGAGACCGGCTTTT
CGGTGATGAGAATACCGTAATTGGCCATCGTTTATCAAGGATTAATTTAC
CATCTCATGCAACTATTCagtaaaagttttgatttttcaaagttcatttt
tgactgGTGCCTAGGACTAAAGCTATTTTTGAAGTAATTTgcatcatcat
cgtcatcgtcATATGTAACAATTTCGTAATTAGatgagattttttctttt
atgcTGACTTTCTAATTACTATTAGCCAATAATGACCccttaaaaagatt
ttgatgtttttgaaaaaagcagTATCACAGCCAGATTTAcaagtttttca
tgttttcaatcCGATTCATAAATCTCTCGTTCATAGTCATCAAGCTTAGA
AGTAGACAGGTCTTTAAAAATAATTGCGTcatgtttttgtgtttttacgG
TCtgttcaaaactttaaaactacCCCTTTCTCGCAAACTACATTGATTTT
CTGCCTTATCCCTTTGCTTTATAAGCATTAAATCATGAATACGTGATGTC
TCGATCATTGCAATCCATAGACAATCATACCCTCAAACACTCCTCTGTGG
TTGTCATGACGAACAATGTTTCATCTGTTTCTCAGAAATGTTGTTTTCCT
TCTCAGTTCTCAGTTAACACACGGTCGAGATATGGAAAGAATTTCGATCA
TATTTATATAGCAAATCATGATATGTGACCCTTTCAAGGTTTCAATTTTA
CTGGGATTTCGAAGCAGTAACTCTTTAGTATCTGAAAACCTTCAGATTGC
TCTTATAGCTCTCTCAGCtttgtttttgatttcccaGCTGGATTCTCTCA
AAACACAGTGCCCTCtatcataaagaaaaaaattatcaatgcATAACAAC
TTTCCCACTGCGTTTTCTGCAATAATCAATTCAACAGACTTTAAAACGAT
CGATTCGAAAGGTCATTTCTAGCATAACATGTCACAAGCTATGGAACAAA
TATTTCaggatcaaaataaaaaaatttgacttgTCTACCACCAGGTCCAG
AACCTCTAGGTCCTTAAAATCAAACCCACCACATCACATTGGAGAAGCTT
CGTCTTTCTCTTTAGATAGAAGTAAAGTTTGCCCCTCAAAtctatattga
gaattccgcttattttaacgtttttcaagatttaaagttgcggcgagaaa
gtcgattttgggctatctctttcatttaatcgaatatttcaatttgggag
gggttggcagacttccaagctatattctgagccttctTGGactatttttg
gatttttgggtcctcagatcctaaggtccttcctaagtcttaagtctagc
gttaaaaatCAGAGTTGAAATTCTGCCCTTCGAACCTACCCCCGGGGGgt
tactaggtttgcgaggtgacgggtatgtccgagccgaaaatcgaaaattt
tgagagacaaaattttggtgattttgggaccctttgagagactttttcct
aaattttgatccattttttccaaattttggtttgattttcaccaaatNNN
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taattgctagcaaactcgtaaaaaagtttgataacctaacgaggagtgtt
ttctatgagttcttaatccacctattctaatccgttggtgTAAGTAACTT
ATTTCAGGCGATCAATGTTTTTTCTTGGAAGGATTTTATCTTCTCCTCAT
CGTGTGCTCGATAAGTTAATAGAGCAGTATTATATTCATATTAAGATTGT
TCATTAAAGGTTTGCGTGGAAGCGCCAAAAAAGTCCTGAGTTTTAAATCA
GATTTTATGTCACCTTATTATAGGGGTTTCTTCGAATTTGGATACCCCTA
TGGATAGCGGCAGCTTTAGTTTTAATCTTTAGGTTTCCTTataaaagttt
gtgtgtgtttgAGGAACTAGCTCGTTTTCTTTCCTATTCATTCTTTAAAA
GCTAtggtttacacgtttttttttttaagaaactagttttaccaagcagc
ctcaatgtttcttaagaaatcggccttttgagtcttaaatgtttcttaca
tgtttcNgcctcaatgtttcttaagaaatcggccttttgagccttaaatg
tttcttacatgtttctaaactttttgacataatcagccttataaaaggct
ggattggaaggttcttaaaaaaacgaattaaagaatgtttttttttcctt
ctcagcctcagcatgtttcttagatgtttcttagtttttagacattctga
gcctcatgtttcttaaaagtgtgtttcttaaaaaaaaaaacgtgtattct
ttatgattcttCAGGTCGAAGGAGGATTCCTTCAAATTCACCATGACGCA
ACTTCAACAACGTCATCCGTCCGTCACTAAACCGTTCCAAGAAGAATTCG
TCGACGTTAACATCAAAAATGGATTCTTCGACGCTGCCAACAAAATGAGA
CGACAaggtatttgattttttctcaCTCCGTTCAGAGGGATTCAAACACG
TTTATAGCAACGAAATCAACCTTTACCCTGATCTAGGGTACGTCATTATT
TTCTTTTGCCGCGAGCATAAAACACCTCTAATAAGTACCTTTTAACTAAA
GATCTTCTATATATGTTATCGCACTGCCCTTTGGTCAAAATCTTTCGGCA
TCTGTTAGACCTAGAAATCTAGCTTCAGTGTATACCCCAATGTTAAGTTT
TCCAAGCGttgaatatatatatatactatAAGAGTATCTTAGCCAGTATT
CTTACGATTTCTTCCCATTTCTTTCTCAGGTGTTTTGACAGACGTATCGC
TAGTTGTTGATCAACAAACCTTTCACACTCATAAACTGATATTATGTTCA
TGCAGTGATTATTTTACTAGCATGTTTAACGGTCCTTTGGCGCATCACGG
CCAACAAGTCTTCATATCGGGCGTCAGTGCCCAAAGCATGGAAGCTATTT
TGAATTACGTTTATACGGGATCGATTATCATCAACGAGGAGTTTATACAA
GACATTTTAGAAGCAGCTtgtttgtttctattgaaaaactTACGCGAACG
ATGCGCGCGATTTCTGCGCGACCGATTAGATGGTGGCAATTGTTTACAGA
TTTTCAGTATCGCTAAAAGTTGTTCATTGTTGGCTTTGATGGAGGATTCC
CTAGAGTTCATCTCCGCGATCTTTCAAGATATTTCAGCGCTGAATGATTT
TAAACAATTAAGTTTTGATGAACTTATTGATGTATTATCTCTTGAAGATT
TAGCAGTGCCAAGTGAAGATTACGTTTTAGAGGCAGCATTTCGATGGTTA
AATCATGATTTATAcggacgtcagcaaaaatttgtaGAAGTGCTAAAAGC
TATACATTTACCATACGTTAGTGACGATATGTTAAAACAGGTCATGGAGA
ATGAAAAATCTTTACGTACTTTTCCTGAGCTGGAAATTCTCTTCCGTTCC
GCCTTACGTCTTACCGTTGAAAACTGGACTCTCTCCAAAGACAGTGATTT
TAATTTACTCCAACCAAAATCATGGATAAATCCACGAAAATGTATTCAAT
GTATACCGAGTCTTATCGCTATGGGTGGGCCTACATTGAACTTATTTAAC
AGCGAACTTGGAAAATGGTGTGAAATAACGAAATGTAAACCACGGCATTG
TCCAGGTATGGATGTTGTTGGGTCCACTATCTATGTTGTAGGTGGTTCAC
TGGAATGGAAACGAAAACGTACTGGAGAGTATTACAACACTGAGAAAAAT
GAATGGATCCCAATGGCGGATATGCACACACCACGAAGTAATTTCGGTCT
CGTCAATTTGGAAGGGAAACTGTATGCTATCGGTGGTTATGATGGGAATT
TCCCTTTAAAGTAAGCTTGATAAAATCTCCTTTTTACTTCACTGTACTAT
AAAACTTGAGCCTAATTTTGGTTGTAAAATAATTCGGTCTACTAGGTAGC
TCTTGCAGCTCATGTTTGCAAATTGGATTCTACAACAATTAGTATTTCCA
ATGAGCTAAACTTAGGCGAATTAAATTGAACAGTCATGTGAACTTACTTT
TGTTCCATCAGATCAGCAGAGGTTTATGATCCACGTACCAACCAATGGAC
GCAAATCTCCGACATGACGACGGCAAGAGACGGCGCATGTAATGTGTCGG
ACGGCGAATCGATTTACGTGATTGGAGGATACGACGGCCACGAATACAGA
CTGACGACAGAAGTTTATAAACCAGAAACTGGTCTATGGGATATCAGTTG
TAAGTTGCGACATCCTCCcctatttttttctattttaagtCAACTCACTC
CTTTTAATTCGAATcattttaactaaaacattggatcttgagctttaaat
atgTATACTATATTCaagcttagttaactaggcctGTATTTACAAGACTA
AGACATTATGGACGTTGAAGTTTGCCTTCTAGGCTACACTAGAATCTGCG
TAAAAATATATggaggatttttttatttcctcgttttttgAAGTTCGgtc
gagaaagtcgcttttggtcTTTTTCTTAAATGTAGGGGTTTATAAACTTC
CAGGCAATATTCTGAGTCTTGTTGGGCCACTATTAaacttttgaatcctc
agatcctaaggacCTAATCTAAGTCTAGCGTAAAAACACTACCGTTCCAA
CCAAAGTTAGcccgcttccaaatcgtttgtggctactataagatttcgtg
ggattttccctttttttctcaaatacatGTATTACGATCTTGATTGTATA
TCCTCCGTAATTGACGTAATTCTGAATGTTGTGAAAGAGTTAACTTACAT
GAAAACTCCATTTGGTTTATCAGCTATTCCAGAGACATCAGTGCAACGTC
AGAACGCGATGTGTGTATACTTTGATTCGAGTATTTACATTATTGGTGGT
TACCATGGAGATACTTATCATTCATCGATGGAAGTATTAGACCTGGAAAC
GAACGAATGGTCTTTTTCAAGCCCCTTAAGTGCACCAAGACATCACGCAG
GCGCCGCTGCCATGAATGGGTAAGTCGTGTTTGATTCTTTATGAATGTTT
ACTTCAGTATCTATCAGCATCATATTGTCCTTTAAGTTATTGCTTAATTT
TTAGAGAAATTGTATTCTACTTTTCCACAAAGGACCTTTCTTGCATCtaa
tgtttcattttcaaagcgTATGCTtaatttatcgttctttaaacCGTTAG
TGCTTAACCTCTGTAATGTACAAAAAGGAATGAAATCGCTGGGATGGTTT
CACTACTACGGTTCGGGGGTTGGGATGGCTAAATTAGTCGTTCTTTATTg
ttttgaattcaatttttcgttgatgagaattttttttttcttctttctga
aaGAAAGAgtaaattttaaattcaaaaccaCAGAATTCACAATCTTGCTT
GGTTTCTGTATGAAATAGAATTTGCCATGTacgatatttttgacatttcg
tTGTGATTTACAACATATAATTTCCTCAAGGTTTCTTAACATGAATCTAT
TCTTCTCTTTTTCTGCAGAAACATTTACATTTGTGGTGGTTGGAGTGCAC
ATATTCCCGTCAGCCACGTTGACGTCTACTCTATCGCTCAAGATACGTGG
CGTCGCGTTTCGCCTCTTCCCACACCAACAATGATTCGCTCAGTAGCGGT
TAACTTCCCACGAAAATGCATCTTGAATTTATTCGCTAACTCAAACAGTG
ATATGGCGGCTTATCGTGCGTCAAGAATACGCTCCTTGCGTTCCATCTCG
GAGTCATCTTCTTCAGGTAATGAGAAAACACAAACAGAAGCTGAAGCTTT
TTTGACTTCCTCGACTGATGAGTAGAATCTTGATTTTGTGTTAATATTTA
TTTCATGCTTTGAGTATATATTACCCTTTCTAATCGGTCTCTTGAATCAA
GAAACTTGATGAAGCTTGGCAAAGTAAGTCTCTCAGTTCGcccatttttt
taacaatataGTGTAGCACCTAATATGGATACCATACTAGCAAATAGCAC
GAAATCATTAACTACCCAACAAGCAGTTTTAAGGTGCGTTTGAAAAATGT
CTTGGGTAAAAAGCTTCGAGGGATCTTATAACATTTATATTTCTTATGAA
CTTTCATTTTGTATTGTATATAATTTATTAAAATTGAAACGTTTTTATAc
aattaacatattttgaagtttaattttcttcaattttcgtTTTTGTAAAT
ACGATACCAAAAGTATCAGGgacaaatttcatttttggtgACAACTTTTA
TGAAGATTCTCCTGCATCGCCTGTTTTGTTTCTAGATGATCTTCAAAATG
ACAAAGCTCTTCTATAGCCGACCATTGTCCCCCCACCTCCAAAgcaaatt
ttcccaaaaattagtGTCTTTTCATTCCCTTTGCTTTTTTGTATTAATTT
TTTGCCTTTTGTAAAATAGAATATGATGAATATATTTTGTGTTACTTGAT
ATTCAAATAAGATTGACAGTATTAACTACTAAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043382XLOC_043382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069671-exon-scaffold_505-1491911889:39934..40213TCONS_00069671-exon-scaffold_505-1491911889:39934..40213Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1510915933:39934..40213TCONS_00069671-exon-scaffold_505-1510915933:39934..40213Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1575043694:39934..40213TCONS_00069671-exon-scaffold_505-1575043694:39934..40213Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1491911889:50048..50190TCONS_00069671-exon-scaffold_505-1491911889:50048..50190Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1510915933:50048..50190TCONS_00069671-exon-scaffold_505-1510915933:50048..50190Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1575043694:50048..50190TCONS_00069671-exon-scaffold_505-1575043694:50048..50190Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1491911889:50513..51593TCONS_00069671-exon-scaffold_505-1491911889:50513..51593Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1510915933:50513..51593TCONS_00069671-exon-scaffold_505-1510915933:50513..51593Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1575043694:50513..51593TCONS_00069671-exon-scaffold_505-1575043694:50513..51593Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1491911889:51795..51982TCONS_00069671-exon-scaffold_505-1491911889:51795..51982Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1510915933:51795..51982TCONS_00069671-exon-scaffold_505-1510915933:51795..51982Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1575043694:51795..51982TCONS_00069671-exon-scaffold_505-1575043694:51795..51982Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1491911889:52557..52752TCONS_00069671-exon-scaffold_505-1491911889:52557..52752Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1510915933:52557..52752TCONS_00069671-exon-scaffold_505-1510915933:52557..52752Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1575043694:52557..52752TCONS_00069671-exon-scaffold_505-1575043694:52557..52752Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1491911889:53252..54219TCONS_00069671-exon-scaffold_505-1491911889:53252..54219Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1510915933:53252..54219TCONS_00069671-exon-scaffold_505-1510915933:53252..54219Clytia hemisphaericaexon
TCONS_00069671-exon-scaffold_505-1575043694:53252..54219TCONS_00069671-exon-scaffold_505-1575043694:53252..54219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_505supercontigscaffold_505:39934..54219 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.39592	4.26417	4.62164	6.58083	7.3359	8.38824	5.18495	8.93449	3.30299	10.07	7.48812	4.63064	5.15839	2.06077	0	0.186531	1.44757	3.00048	1.01555	1.31252	0.325199	0.603463	4.14289	9.06591	0.271509	0.99338
Blast
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BLAST of TCONS_00069671 vs. Swiss-Prot (Human)
Match: KLH17 (Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 8.731e-78
Identity = 173/580 (29.83%), Postives = 282/580 (48.62%), Query Frame = 3 
Query:  393 FDAANKMRRQGVLTDVSLVVDQQTFHTHKLILCSCSDYFTSMFNGPLAHHGQ-QVFISGVSAQSMEAILNYVYTGSIIINEEFIQDILEAACLFLLKNLRERCARFLRDRLDGGNCLQI--FSIAKSCSLLALMEDSLEFISAIFQDISALNDFKQLSFDELIDVLSLEDLAVPSEDYVLEAAFRWLNHDLYGRQQKFVEVLKAIHLPYVSDDMLKQVMENEKSLRTFPELEILFRSALRLTVENWTLSKDSDFNLLQPK------SWINPRKCIQCIPSLIAMGGPTL-------NLFNSELGKWCEITKCKPRHCP-GMDVVGSTIYVVGGSLEWKRKRTGEYYNTEKNEWIPMADMHTPRSNFGLVNLEGKLYAIGGYDGNFPLKSAEVYDPRTNQWTQISDMTTARDGACNVSDGESIYVIGGYDGHEYRLTTEVYKPETGLWDISSIPETSVQRQNAMCVYFDSSIYIIGGYHGDTYHSSMEVLDLETNEWSFSSPLSAPRHHAGAAAMNGNIYICGGWSAHIPVSHVDVYSIAQDTWRRVSPLPTPTMIRSVAV----NFPRKCILNLFANSNS 2069
            F A ++MR++G+L D+ L V  +    HK++L SCS YF +MF   ++   Q  V +  +  Q+++ ++ + YT  I++ E  +Q +L AA L  L  +R+ C +FL  +LD  NCL I  F+ A SCS   L++ +  ++   F D++   +F  L   ++++++S + L VPSE+ V  A   W+ HD+  R+Q    ++K + LP +S D L   ++ E  +R  P+ + L   AL+             F+LL  +      S   PR+C    P L A+GG +L         +++   +W  +     R    G+  VG+ +Y VGG        T E Y+   N W P   M T RS  G+  L G LY+ GGYDG   L SAE YDP T  WT ++ M+T R      +   ++Y +GGYD   +  T E Y+P+  +W  S +     +R +A     + ++Y+ GG  G +  +S+E    +   W   +P++  R      AM+G +Y  GG      ++ ++ Y+   + W   S + T      VAV    NFP      L  +S S
Sbjct:   79 FVAMSRMRQRGLLCDIVLHVAAKEIRAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALDQLVQFAYTAEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPSNCLGIRGFADAHSCS--DLLKAAHRYVLQHFVDVAKTEEFMLLPLKQVLELVSSDSLNVPSEEEVYRAVLSWVKHDVDARRQHVPRLMKCVRLPLLSRDFLLGHVDAESLVRHHPDCKDLLIEALK-------------FHLLPEQRGVLGTSRTRPRRCEGAGPVLFAVGGGSLFAIHGDCEAYDTRTDRWHVVASMSTRRARVGVAAVGNRLYAVGGYDGTSDLATVESYDPVTNTWQPEVSMGTRRSCLGVAALHGLLYSAGGYDGASCLNSAERYDPLTGTWTSVAAMSTRRRYVRVATLDGNLYAVGGYDSSSHLATVEKYEPQVNVW--SPVASMLSRRSSAGVAVLEGALYVAGGNDGTSCLNSVERYSPKAGAWESVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVLELLNFPPPSSPTLSVSSTS 641
The following BLAST results are available for this feature:
BLAST of TCONS_00069671 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH178.731e-7829.83Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE... [more]
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