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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069679 ID=TCONS_00069679|Name=TCONS_00069679|organism=Clytia hemisphaerica|type=transcript|length=585bp
AAAAGGCAGCGAAATATTGATGGAAGTCCTCCACCAGTGGTAGTTAAAAG
CAAACAATTTTTCACTATTTAAAAGGAAGATGGTCCAATACTTCTCCATT
CGAAAGACATAACTTTGATTACATAGCACAAAAGACTTGACCTTACAAGA
TGTTTTTAGCTTTCTTTCTGATAAGTTGCTTTTTGGTGGCTTCAAACACT
GCTGACAAGACATGTGAAAATCTCATTGCACCAAAAAACGGATCTGTCAC
ATACATACATCTGTCACGGCATTTAAAGCTTGCACAAATGTCATGCAAAT
ACGGTTACAAACCAAGCCAAAGGGTTCCTTTTATATTTGTTTGTGATAAA
GGCCAGTGGGTGGACCCATCTTCTGGCGCTACACCAAAGGTTTATACAAG
CCTTCCAGACTGTATCCCTGAGTAATGGATTTAAGACAGTAAGACAGATt
gtaaaattattattttttgtaatattttacaatattttaacTTTAAGAAA
ATTCAAAGCTTACACTattcttgaatgtttttttctcgCAATTCAAACCC
TCTTCTCTCAATGATTGGGATATGGTTGCTCTACG Run BLAST on NCBI transcript from alignment at scaffold_505:112415..113513- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069679 ID=TCONS_00069679|Name=TCONS_00069679|organism=Clytia hemisphaerica|type=transcript|length=1099bp|location=Sequence derived from alignment at scaffold_505:112415..113513- (Clytia hemisphaerica)
AAAAGGCAGCGAAATATTGATGGAAGTCCTCCACCAGTGGTAGTTAAAAG
CAAACAATTTTTCACTATTTAAAAGGAAGATGGTCCAATACTTCTCCATT
CGAAAGACATAACTTTGATTACATAGCACAAAAGACTTGACCTTACAAGA
TGTTTTTAGCTTTCTTTCTGATAAGTTGCTTTTTGGTGGCTTCAAACACT
GGTAAGTTTTTTCTTCTGATAGAAATTCCTTCACCTTAAAGCCTAGTCAA
TTCGTATAGATCTACCCTGAAGATTAGCTTGATACACCCCTGTGTCACAG
ACCCGGTGGACCCCCCACCCCGGTGGAAAAATAGGTCAAAAAATCGTCCC
CGGTGGAAAAAATATCCTACAATTTCAACCCCACTGCGAAATTGCTCTAC
GATTTTATCCCCATTGAAAACTGAATGTAAAAAATTGCACTCCAAAGCCA
TCCCCACTGGAATTTCCGAGCTGGAAACAATAGATCTTCTATCCCCATTG
GCATTTTGATATAAATTTTCATCCTCACTGAGGGAAAAAGTTCTACCGGG
GCATTGAGACAGGGGTGTCTTGATGTTAACGATCAAAGTCCTATCAAGGC
TTTTTTTTCCTTCAATTAACTACACTATTATCGTAAGCTCATTTTAAATT
ATGCTTTTCGCTAGAATGTTAAGCTAACGAAACCTTTAATTTTCAATAAC
TTCTTTCTTTCACAGCTGACAAGACATGTGAAAATCTCATTGCACCAAAA
AACGGATCTGTCACATACATACATCTGTCACGGCATTTAAAGCTTGCACA
AATGTCATGCAAATACGGTTACAAACCAAGCCAAAGGGTTCCTTTTATAT
TTGTTTGTGATAAAGGCCAGTGGGTGGACCCATCTTCTGGCGCTACACCA
AAGGTTTATACAAGCCTTCCAGACTGTATCCCTGAGTAATGGATTTAAGA
CAGTAAGACAGATTGTAAAATTATTATTTTTTGTAATATTTTACAATATT
TTAACTTTAAGAAAATTCAAAGCTTACACTATTCTTGAATGTTTTTTTCT
CGCAATTCAAACCCTCTTCTCTCAATGATTGGGATATGGTTGCTCTACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069679-exon-scaffold_505-1575043694:113313..113513 | TCONS_00069679-exon-scaffold_505-1575043694:113313..113513 | Clytia hemisphaerica | exon |
| TCONS_00069679-exon-scaffold_505-1575043694:112415..112798 | TCONS_00069679-exon-scaffold_505-1575043694:112415..112798 | Clytia hemisphaerica | exon |
| TCONS_00069679-exon-scaffold_505-1510915933:113313..113513 | TCONS_00069679-exon-scaffold_505-1510915933:113313..113513 | Clytia hemisphaerica | exon |
| TCONS_00069679-exon-scaffold_505-1510915933:112415..112798 | TCONS_00069679-exon-scaffold_505-1510915933:112415..112798 | Clytia hemisphaerica | exon |
| TCONS_00069679-exon-scaffold_505-1491911889:113313..113513 | TCONS_00069679-exon-scaffold_505-1491911889:113313..113513 | Clytia hemisphaerica | exon |
| TCONS_00069679-exon-scaffold_505-1491911889:112415..112798 | TCONS_00069679-exon-scaffold_505-1491911889:112415..112798 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_505 | supercontig | scaffold_505:112415..113513 - |
Blast
The following BLAST results are available for this feature:
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