TCONS_00069733 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069733
Unique NameTCONS_00069733
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2841

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069733 ID=TCONS_00069733|Name=TCONS_00069733|organism=Clytia hemisphaerica|type=transcript|length=2841bp
GAAATTTTCATATTATCTTATATCAAATTAGAACTGGATATTTTAGAAAG
AGCCAAAATTAAAAACCCTTCATTTTTGTTTACTTATTCAACATTATTTA
CAGGATCCAAATTATCCTTCGAAGAATTTGCTCAAATCCGGAAAATGGTT
ATGTGATAGAAACAATCCTCATCAATCGGCTGAAGTTGAAATATCTTTTT
CAAGAGCAACAACAATTCACTTCATTGATATAGGGAACAGTGGTAGCTGT
TATGTAGATATCTTAGTACGTCATTCTCTGAAAGGAAATGACTTCAAAAG
TCTAATACCAACTTTCACATTCATGTCCGTGCCAGAAAGTAAATCAGGGG
AAAATAAATGTAAAGTTGAAATGTTCAAACAAgACAGAATGATGGCTGAT
GTCAGAGATGAAAAATGGGATGTCCTGAAGATAGTGTGCCGCCAACCATA
CAAACCCAATGCTCAATATGGCATCAGCTTTGTTAATGTAAGGGGATGTA
GTTCTGGAACTAATCAAGcaaaagatgtaaaagcaaagcCTCCTCAACCG
TCAAATCAATCTGCACTAAATTCGTTTTTCGGATTTAATAACACTGGTCT
GGTCTCCCCAAAGCCTGGAAAAACACTGGcattaaaatctaaatcacCTA
TACTGAAATCACCTCATCAAGTTATGTTGACAAAGACAAAAGtTACAAAT
GAAATTCAAGAAAGCCCAACCAAATATTCGTCAGAAAAGTTGAAGttccT
CAATGATGCAGAAGAGTTTTTGTATAGAGCTGGTTTTGATGAAGCCATCA
AATTGGGGAAGCCAATCCTAATGGCAGattGCTActgaaatgaagaaaac
tttaCAAGCAGAGAAAAACAATGCTAAGATTTCATCAACTCCACCAAATA
TGAATAGTCTTGAACGtgaatgtacaaaatgtgaagtCAGtttttcaatt
GAAGTTATGGAAATCCATGAGCAAATTTGTACAGCAACTCCCAGGACTAA
ACCAAGACAAAATCGAAAATCCATATGTTTTGATTATACCATGTCAGATG
AGGATAAATCAATACAAAGTTTCAATAAAAGAAAACCATCAATGTCCACA
AAATTAACATCTGCTGGTGAAACTTCTGCTTCATCAGCATCCTCTAGCCC
TGAATCTCGTTGGTATGGTAAAACAATACCTAAAAGCTCTGGATCAAATA
TTACAACAACACCAAAAAGCTCAGGCTCTACAGCTACAATAACATTGAAA
TCCTCCTCAAAACTATTTGCACGTAAACGGTCAGGATCTACTAGTAAAGC
AGCTAAAGCTAAATTACCGGAACCTGTTAATTTACCAATTATAGATACAC
ATGTGTCCAAAACTGGACGTGATTCTCCAATCTCAAAGAAGCTATTTCTC
GATCACAACCAAAACGAAAATGTAAAATCTAATAACAATAGTGATGATTT
CTTTGATGACATGAATCTCAGTGACTTTGAGGATGATACTACTAATAACG
ATGATGATTTAGTTGTTACAAAAGACACAAATTTCAAAAGGGACAATTTT
CAGAACTCTATTTCTATAaatgatgatgacgatgataTCATAATTTCCAA
AGAAAAGAATAACTCACATAATACACAATATGTTGAATGCCCAATGTGTT
TTGAACTCATGAGTACCACTATTATTGAACTACATGCTTCTACGTGTAAT
GGAAAAACAGAGACAACaccacaaactttcaataataaaCCAAGCTCAAA
TGCATTTGCAGCTACTCCATATCTTTCAAGTGTCAATAGACAAGCAAACA
AGATGGGTTCTAATGCATCTACAGTGAGTCCGAATCTTTCAACAACTAAC
GGTTCATTGGAGAATCACCAACACCAAGGCGATACTCAAGAATGTCCTGT
CTGTAACAAACAAATCAATAAATATAAAATTGCTGTCCATGTTGTTTTGT
GTACTGGTAAGGGTCTGGATAATGATAAAGAAGATGATGACCTACCATCC
ATTTTCAACAGAAAATCTTCTAGTACTTCCGCAACGAAAACAAAGACTTC
TAAAAAGTCTTCTTCTACTAATGCTAGTCCCTCCCCTTCAGGGGCTCATA
ATGTGATGAGTGTTATGCACAAGCCTTCAGGGAGCCACAATGCAATGAAC
ACTTTCCAAAATACAAACAACACTGGTGCCAGTTATAATCCTTCGGGAGC
TCATAATACACCAACTAATAGTATACTAGTTCCTGACCATGATTATGGGA
AAAGAGAGGAAGCTTCTTGTCCCATATGCTCAATAACATTGGATAAGAGT
ATGATTGAAGTACACGTTAATATGTGTTTAGACAGATTGCAATGAAGCTG
TTTGAATTCAGATATTTAAGTTGTATTTAAAGGGGTTATCAGATGATTCT
Tgatatttggcttagagataccttttgacctattttttttccaaagctga
gatacttgactttgaaatttctaaaaataagtctttacacagtctttacg
ttgaatttctattattttcaagtcaaaattttaaaattcagagtcgaata
tctcagctttggaaaataattgggtcataaactttggaggtgtttcttag
gaccataaaaggtatctctaagccaaatataaaaaatcatctgataatcc
ctttaaaGTTGACTTTTGATCTCAATGCAAGATGACATTACATAATTTTC
TAATAATTACTGAGATGCTATTTGGCTTTGTCATAATTTGACTATGTTGA
CTATTTGAATAATGCAATAAGAGGTCATTTTGGATTTTGATATTCTTGAA
atacattatatatttttatcttatttgAGTCAAACCTTTTC
Run BLAST on NCBI

transcript from alignment at scaffold_506:468427..475395-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069733 ID=TCONS_00069733|Name=TCONS_00069733|organism=Clytia hemisphaerica|type=transcript|length=6969bp|location=Sequence derived from alignment at scaffold_506:468427..475395- (Clytia hemisphaerica)
GAAATTTTCATATTATCTTATATCAAATTAGAACTGGATATTTTAGAAAG
AGCCAAAATTAAAAACCCTTCATTTTTGTTTACTTATTCAACATTATTTA
CAGGATCCAAATTATCCTTCGAAGAATTTGCTCAAATCCGGAAAATGGTT
ATGTGATAGAAACAATCCTCATCAATCGGCTGAAGTTGAAATATCTTTTT
CAAGAGCAACAACAATTCACTTCATTGATATAGGTAAGATGACTTGCACA
TTAGACAAGGTGGAACTTTTCACATTGTTTTTTTTAAATGGCAGAAAGGT
AACAACTGGCTTTGTTTAACACTGAAATATTTCAAAACACTCCTGAACAT
TCTCTCAAGCTTTGGACAAAAACTAAATGTTATTCTGATCGAGTATTTGA
AAATTTATTTTAATCTATTTATAGGGAACAGTGGTAGCTGTTATGTAGAT
ATCTTAGTACGTCATTCTCTGAAAGGAAATGACTTCAAAAGTCTAATACC
AACTTTCACATTCATGTCCGTGCCAGAAAGTAAATCAGGGGAAAATAAAT
GTAAAGTTGAAATGTTCAAACAAGGTAAATTAGATTTTTTTATCAATGTT
TTAATCAGATCTTACATTTAGGATAAAGATCCTATCTGTTTATTCTCTCA
ATGTTTTTCCCTTAGAATCAAAGTCATCTTGTTTTCTCAGTTATATTTTT
GTATTTTTATTTTTCTGTGACAACGTGCCTTTTCTCAAATTACTAAGAAT
TTGTGGTAATAAAGCCTTTTTAGTGGAAAAAGAACCTGTTTTTGCCAACA
ACTAGATATTTTTGAAAATATGACCTGGAAAAAAAAAATTTAAAAGTCTA
TAATTAATAAATTTTAGACAGAATGATGGCTGATGTCAGAGATGAAAAAT
GGGATGTCCTGAAGATAGTGTGCCGCCAACCATACAAACCCAATGCTCAA
TATGGCATCAGCTTTGTTAATGTAAGGGGATGTAGTTCTGGAACTAATCA
AGCAAAAGATGTAAAAGCAAAGCCTCCTCAACCGTCAAATCAATCTGCAC
TAAATTCGTTTTTCGGATTTAATAACACTGGGTGAGTTTTCTGATTCAAT
TTAATTGATTCAACAATTTTTCATCTGTGATGATCATAAAGAAGCTTGCT
TCACTTTGCTGTATCTTTATAATGATGTCTTTTTTTTGCTCATTGGCAAT
TATTCTAGACACGAGATAATGCTCAAAGATTTAAAGCATAATAACTTGTA
AATGAATGGTGTTTTTCTTGTCTGAAAAGCAGTTATTATTCTATGTGAAA
CAAGAAATTTAGTTATTATTTTAAACTAAACCAGTTATCATCTTTTTCCT
TGTTATTTAAGTCTGGTCTCCCCAAAGCCTGGAAAAACACTGGCATTAAA
ATCTAAATCACCTATACTGAAATCACCTCATCAAGTTATGTTGACAAAGA
CAAAAGGTTTGTTTATTGAAATTATTCTTCAGCATAGTTTTCATGGTTCT
TTATTATTTTTTTAAATACTTGAATTTAAATTTCGCACACAATTCCTGAT
GCATAAACTGTATAACATTTTTTTATCATTTAGTTACAAATGAAATTCAA
GAAAGCCCAACCAAATATTCGTCAGAAAAGTTGAAGGTTTGTTTATTACT
TTCTTATCCTTTGTTCACTTCTTGTATACTTTTTGGGGTTCTAGGAAAAC
TGCCCCCGAGAAAATTGCCCCCCGGAAAACTGCCCCCGGAAAATTGCCCC
CTAGAAAATTGCCCCCTAGGAAAATTGCCCCCTAGGAAAATTGCCCCCTA
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTTGCTTGAAATCTTACACCCTCTTCTCACAGACCCGGTAGG
ATTTTTTTAGCCAGTGGGGATAAAAATAACGGACTGAAAGTCGATATTCC
TTTATTTTTTATGGCTGGGGAAAAATCAGAAAATTCAATGGCCATTTGAA
GTTTCATTGGATTTTATAAAAAAGTGGAAAAAAAGATGGCGGTGGGGGGT
AGCAATTTTCTAGGGGGCAATTTTCCTAGGGGGCAATTTTCCGGGGGGCA
GTTTACCGGGGGGCAGTTTTCTCGGGGGCAATTTTCCTGACACCACTTTT
TGGACCTACCTGGAGGTCCTTTAATTTGACTGTTGTCCGTCCGTCCGTTC
GTCTGTTACAAGCTTTTTTGGGACTGGCTCATTAGTTTTTTTCATTTTTA
GCACAGTAATGCAAAATAGCAATGCCTAAAAGGTGACGGAGCCTGATTTT
TGAGAAAAAAAAATTGGGGGCAAATTTGGGCCAAAACTGCCTAAAAATAG
GGTTTTTTGGATTTTGTGCAAAATTGCTTCATTAGTTTTTCCTGATATTT
GGCAGAAAGATAGAGTGCTAGGTGGCCTAAATTGCGGCTGATGTGATTTT
TCCCTTTAGTCGTTTTGAGGGAAAATGGCGATTGGCATGGTAATAGAAAA
AAATGATTCTAATTTTTTTTACATAAAGATAGAGGGAAAGGTTTTCCATA
ATTTTTTTCTTGCAGTAAAATTCTGATTTTCTTATGTTGAAACAAAAATA
CCCTTCAGTAAATTTATGGGGAAATGAGTATTTCTCGCGATTGGCTTGGT
ATTATTTTCTGAATTTTAGTTTGTCTGACTATTGTTGCCATTATTCTATT
TTTTTTATTACACTATAGCCTTTAGGTAGGTCCATTCAGCATGTAGCTTG
TTTTTCGTTTATTCCTTAATGAATAGAATCAACAGAAATATTGAAAAATG
AAGACATCATGAAATACTAGGTTGATTTTAATATTTTTGTATAATAATTG
AGCAAACTTTCAATATTACAATTTTAGTTCCTCAATGATGCAGAAGAGTT
TTTGTATAGAGCTGGTTTTGATGAAGCCATCAAATTGGGGAAGCCAATCC
TAATGGCAGGTACACCAAATTTCATGAACTGTTATACTTCGAAAATTACT
CAAACTAGATTATTATTTTATTCTTGCAGAAAAAAATTCATAAAGATTAA
TGCAATGCTACTTTCTGATAACACCCAGTAACACCTACCTTTTATACATA
CCCCAGCTGGCACACAACGTTCTTTTAACGTTTATCTAACGTTCACAACG
TCCATGTAATGTTAGATGAACGTTGAAACAACATTGTTTGCCAACTGGGA
CTTAAGATCAGATTTTTCTTGGAATGACTGTTTTTAACCAAAATTGTTAT
TCTCTTTAGAATACAGAGAAATGATTGAAAAAGAACGAGGACAAAAATTG
TCAAGGCAGCAAAAGAAACTTCTTGTATATGTAGGTATTACTTATTTACA
TCTTGCTCCTGTCTTATTGATAAACAATCAGATTTTCACTAATCCAATTT
TTCTTCTTTAGATTGCTACTGAAATGAAGAAAACTTTACAAGCAGAGAAA
AACAATGCTAAGGTAATGTTTTAGAATAATAAGTTTTTACGATTTTTTTC
GTTAAAAAGTAAATGAATGTAAAGGTCAACCCTCTTTGATTCACACCTCT
ACTATTCAAATCAATCTTCTTAATAGAAAATCAGCCCAAATTTGAGTCCT
GTCATAATTTAAAAAAAATTTGCTTCGTGAAGTTTGAATTAGAGAAAGTC
AACTGTAACAGCAAAGATATAAAGGGCTGAGAATGACAAACCATTTCATT
GGTGGTCATTTTGAGTGTATCATACAGAAAAATCTCTTTCTACAGAATTC
TTTATGTTTCCTCTCTTCTCGGGTAAAAAAATCACTTTTCGTTAGAATTC
TGACTTTGGCTGATTAATAAGCATGAATTACACGCCATTGTAGAGTACCT
TTAGGGAAGAAATTTTTGCGGAATTAAATTTTGCGGTTTTTTGACAAATC
CGTAAAATTAAATTCCATGAAACACAAATAATCTAGATTTAAAAAATCAC
CTCTAAAATATGCCATTTTGTAAACAAAACATTCTCTCAACTGCAAAATT
AAATTCAACGAAACGAAATTTTGAGCTGTGAATCACGAAAATTTCTTCCC
CCAAAAATTTCTTCTCGTATACTATAAATGTACTTTTAATTATGTTTTCA
GATTTCATCAACTCCACCAAATATGAATAGTCTTGAACGTGAATGTACAA
AATGTGAAGTCAGGTAGTATATAAATTATTTCAGAAACTCAAAATAAAAT
TTAAAAAATTCAGTATTTAAGGATTCACTTTATTAAACACACTTTAGGAG
GACTTAAAAATTGAGCTTGCATATGTTTAACAGAATAACTTTTTTATAGT
AAGTCAAACCTATTTTTCAATCAAAAAAACGAATCTCAGGTAAATAAAAA
CTGCACCTCCGACAATTAGCCCTTAGAATGACTAAATTGTGCAAAACAGT
AAGGAAATTAAGTTAATCTTTAATTATTTTACTTTTTTTAGTTTTTCAAT
TGAAGTTATGGAAATCCATGAGCAAATTTGTACAGCAACTCCCAGGACTA
AACCAAGACAAAATCGAAAATCCATATGTTTTGATTATACCATGTCAGAT
GAGGATAAATCAATACAAAGTTTCAATAAAAGAAAACCATCAATGTCCAC
AAAATTAACATCTGCTGGTGAAACTTCTGCTTCATCAGCATCCTCTAGCC
CTGAATCTCGTTGGTATGGTAAAACAATACCTAAAAGCTCTGGATCAAAT
ATTACAACAACACCAAAAAGCTCAGGCTCTACAGCTACAATAACATTGAA
ATCCTCCTCAAAACTATTTGCACGTAAACGGTCAGGATCTACTAGTAAAG
CAGCTAAAGCTAAATTACCGGAACCTGTTAATTTACCAATTATAGATACA
CATGTGTCCAAAACATCATCCTTAAGCAGTACAAAAACTGGACGTGATTC
TCCAATCTCAAAGAAGCTATTTCTCGATCACAACCAAAACGAAAATGTAA
AATCTAATAACAATAGTGATGATTTCTTTNTCTACAGCTACAATAACATT
GAAATCCTCCTCAAAACTATTTGCACGTAAACGGTCAGGATCTACTAGTA
AGGCAGCTAAAGCTAAATTACCGGAACCTGTTAATTTACCAATTATCAAT
ACACATGCGTCCAAAACATCATCCTTAAGCAGTACAAAAACTGGACGTGA
TTCTCCAATCTCAAAGAAGCTATTTCTCGATCACAACCAAAACGAAAATG
TAAAATCTAATAACAATAGTGATGATTTCTTTGATGACATGAATCTCAGT
GACTTTGAGGATGATACTACTAATAACGATGATGATTTAGTTGTTACAAA
AGACACAAATTTCAAAAGGGACAATTTTCAGAACTCTATTTCTATAAATG
ATGATGACGATGATATCATAATTTCCAAAGAAAAGAATAACTCACATAAT
ACACAATATGTTGAATGCCCAATGTGTTTTGAACTCATGAGTACCACTAT
TATTGAACTACATGCTTCTACGTGTAATGGAAAAACAGAGACAACACCAC
AAACTTTCAATAATAAACCAAGCTCAAATGCATTTGCAGCTACTCCATAT
CTTTCAAGTGTCAATAGACAAGCAAACAAGATGGGTTCTAATGCATCTAC
AGTGAGTCCGAATCTTTCAACAACTAACGGTTCATTGGAGAATCACCAAC
ACCAAGGCGATACTCAAGAATGTCCTGTCTGTAACAAACAAATCAATAAA
TATAAAATTGCTGTCCATGTTGTTTTGTGTACTGGTAAGGGTCTGGATAA
TGATAAAGAAGATGATGACCTACCATCCATTTTCAACAGAAAATCTTCTA
GTACTTCCGCAACGAAAACAAAGACTTCTAAAAAGTCTTCTTCTACTAAT
GCTAGTCCCTCCCCTTCAGGGGCTCATAATGTGATGAGTGTTATGCACAA
GCCTTCAGGGAGCCACAATGCAATGAACACTTTCCAAAATACAAACAACA
CTGGTGCCAGTTATAATCCTTCGGGAGCTCATAATACACCAACTAATAGT
ATACTAGTTCCTGACCATGATTATGGGAAAAGAGAGGAAGCTTCTTGTCC
CATATGCTCAATAACATTGGATAAGAGTATGATTGAAGTACACGTTAATA
TGTGTTTAGACAGATTGCAATGAAGCTGTTTGAATTCAGATATTTAAGTT
GTATTTAAAGGGGTTATCAGATGATTCTTGATATTTGGCTTAGAGATACC
TTTTGACCTATTTTTTTTCCAAAGCTGAGATACTTGACTTTGAAATTTCT
AAAAATAAGTCTTTACACAGTCTTTACGTTGAATTTCTATTATTTTCAAG
TCAAAATTTTAAAATTCAGAGTCGAATATCTCAGCTTTGGAAAATAATTG
GGTCATAAACTTTGGAGGTGTTTCTTAGGACCATAAAAGGTATCTCTAAG
CCAAATATAAAAAATCATCTGATAATCCCTTTAAAGTTGACTTTTGATCT
CAATGCAAGATGACATTACATAATTTTCTAATAATTACTGAGATGCTATT
TGGCTTTGTCATAATTTGACTATGTTGACTATTTGAATAATGCAATAAGA
GGTCATTTTGGATTTTGATATTCTTGAAATACATTATATATTTTTATCTT
ATTTGAGTCAAACCTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043418XLOC_043418Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069733-exon-scaffold_506-1575043694:475163..475395TCONS_00069733-exon-scaffold_506-1575043694:475163..475395Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:474822..474971TCONS_00069733-exon-scaffold_506-1575043694:474822..474971Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:474315..474528TCONS_00069733-exon-scaffold_506-1575043694:474315..474528Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:473940..474034TCONS_00069733-exon-scaffold_506-1575043694:473940..474034Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:473760..473812TCONS_00069733-exon-scaffold_506-1575043694:473760..473812Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:472087..472168TCONS_00069733-exon-scaffold_506-1575043694:472087..472168Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:471584..471634TCONS_00069733-exon-scaffold_506-1575043694:471584..471634Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:470883..470944TCONS_00069733-exon-scaffold_506-1575043694:470883..470944Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:470182..470604TCONS_00069733-exon-scaffold_506-1575043694:470182..470604Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1575043694:468427..469904TCONS_00069733-exon-scaffold_506-1575043694:468427..469904Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:475163..475395TCONS_00069733-exon-scaffold_506-1510915933:475163..475395Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:474822..474971TCONS_00069733-exon-scaffold_506-1510915933:474822..474971Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:474315..474528TCONS_00069733-exon-scaffold_506-1510915933:474315..474528Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:473940..474034TCONS_00069733-exon-scaffold_506-1510915933:473940..474034Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:473760..473812TCONS_00069733-exon-scaffold_506-1510915933:473760..473812Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:472087..472168TCONS_00069733-exon-scaffold_506-1510915933:472087..472168Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:471584..471634TCONS_00069733-exon-scaffold_506-1510915933:471584..471634Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:470883..470944TCONS_00069733-exon-scaffold_506-1510915933:470883..470944Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:470182..470604TCONS_00069733-exon-scaffold_506-1510915933:470182..470604Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1510915933:468427..469904TCONS_00069733-exon-scaffold_506-1510915933:468427..469904Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:475163..475395TCONS_00069733-exon-scaffold_506-1491911889:475163..475395Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:474822..474971TCONS_00069733-exon-scaffold_506-1491911889:474822..474971Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:474315..474528TCONS_00069733-exon-scaffold_506-1491911889:474315..474528Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:473940..474034TCONS_00069733-exon-scaffold_506-1491911889:473940..474034Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:473760..473812TCONS_00069733-exon-scaffold_506-1491911889:473760..473812Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:472087..472168TCONS_00069733-exon-scaffold_506-1491911889:472087..472168Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:471584..471634TCONS_00069733-exon-scaffold_506-1491911889:471584..471634Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:470883..470944TCONS_00069733-exon-scaffold_506-1491911889:470883..470944Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:470182..470604TCONS_00069733-exon-scaffold_506-1491911889:470182..470604Clytia hemisphaericaexon
TCONS_00069733-exon-scaffold_506-1491911889:468427..469904TCONS_00069733-exon-scaffold_506-1491911889:468427..469904Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:468427..475395 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.248739	0.519839	0.313281	0	0.750961	0.668951	1.39688	1.74041	0.482233	1.00135	0	0.151887	0.406337	0.276579	0.373638	0.257776	0	0.439962	0.422046	1.38843e-07	0.767945	0.591087	0.421321	0.512536	1.2746	1.59952	0	0.242402	0.229965	0.453254
Blast
[Close]
BLAST of TCONS_00069733 vs. Swiss-Prot (Human)
Match: XRCC1 (DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.373e-20
Identity = 52/150 (34.67%), Postives = 87/150 (58.00%), Query Frame = 2 
Query:   53 PKLKTLHFCLLIQHYLQDPNYPSKNLLKSG---KWLCDRNNPHQSAEVEISFSRATTIHFIDIGNSGSCYVDILVRHSLKG---NDFKSLIPTFTFMSVPESKSGENKCKVEMFKQDRMMADVRDEKWDVLKIVCRQPYKPNAQYGISFV 484
            P+++  H   ++    QD  + ++NLLK+    KW   +    ++  V +   +   IH +DIGN GS +V++LV  S  G    D++ L+ T +FMS  ES+SG N  +V MF  D+++    +++WD +KIVC QPY  ++ +G+SFV
Sbjct:    2 PEIRLRH---VVSCSSQDSTHCAENLLKADTYRKWRAAKAG-EKTISVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFV 147
The following BLAST results are available for this feature:
BLAST of TCONS_00069733 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XRCC11.373e-2034.67DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 ... [more]
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