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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069764 ID=TCONS_00069764|Name=TCONS_00069764|organism=Clytia hemisphaerica|type=transcript|length=901bp
TATACTTATAGACCATAACAATTCAAAATGCCGTTTTCTTTTGGCAACAC
GAGCTCTTCTTCAACCTCAGGATTTGGTGGATTTGGAGCTACATCAAAGC
CTTCAACAACAGGTTTTGGAGGATTTGGATCAACCTCCACAGgtGGAGGA
TTCAGTGGTTTTGGTGCAAAAACAACAGCGTCAACAGGATTCTCTTTTGG
AACTCCATCAACTGCAACAAGCACAGGGGGAGGACTCTTTTCAGGATTTG
GTTCAACAACCAAAACAACAGCTTCTACAGGTTTTGGTGGATTCGGCACA
GGAACAACAACTGGTTTTGGAGGATTTGGTGCCAAAACAACAGCTTCCAC
ATTTGGTGGGTTTGGAACAACAACTACATCTGCCTCAGGTAGATTTGGTA
CAACCGGCAGTCTATTTGGTGGGTTGAACAAAACAACAACAGCAAGCACT
GGTTTCTCTCTTTCCAATCCCACCCAAACAGGATGGAATGCTGgtcaaca
acaacagcagcaaGCTCAAGGTTTGGACAATCCATTGGCAAGCATGACCA
GTGCACTGACAATGCCCACCATCTTTGGTGACGAGCGAGATGGCATCATT
GCCAAACTGAACCAATTGCAAGCATTGTGGGGTGAAGGGAAAGCTGTTTA
TTCACACAACGCACAACCTATTCCATTGTCACAAGAAAACCCTTTTTCAC
GATTTAAGACGATAGGTTACAGTTGTTTACCATCTGCGAAAGACAGTGAT
GGTTTCATTTCGTTCGACTTGAAACACAAGGAAGATTACGTGAAAACCAA
CCAACAACAATTTGTCGaatccatcagtaaaatcatgGGCAACAAACCGA
CATTCTCCGTATGTGTTGATGGATTACGCAGTCTTCCTGGTGACAGGTAA
T Run BLAST on NCBI protein sequence of TCONS_00069764-protein >TCONS_00069764-protein ID=TCONS_00069764-protein|Name=TCONS_00069764-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MPFSFGNTSSSSTSGFGGFGATSKPSTTGFGGFGSTSTGGGFSGFGAKTT
ASTGFSFGTPSTATSTGGGLFSGFGSTTKTTASTGFGGFGTGTTTGFGGF
GAKTTASTFGGFGTTTTSASGRFGTTGSLFGGLNKTTTASTGFSLSNPTQ
TGWNAGQQQQQQAQGLDNPLASMTSALTMPTIFGDERDGIIAKLNQLQAL
WGEGKAVYSHNAQPIPLSQENPFSRFKTIGYSCLPSAKDSDGFISFDLKH
KEDYVKTNQQQFVESISKIMGNKPTFSVCVDGLRSLPGDR Run BLAST on NCBI transcript from alignment at scaffold_507:43385..49996- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069764 ID=TCONS_00069764|Name=TCONS_00069764|organism=Clytia hemisphaerica|type=transcript|length=6612bp|location=Sequence derived from alignment at scaffold_507:43385..49996- (Clytia hemisphaerica)
TATACTTATAGACCATAACAATTCAAAATGCCGTTTTCTTTTGGCAACAC
GAGCTCTTCTTCAACCTCAGGATTTGGTGGATTTGGAGCTACATCAAAGC
CTTCAACAACAGGTTTTGGAGGATTTGGATCAACCTCCACAGGTATGTTC
AGTTTACCTATTTATTTTTTCAGTCGTCATAGAGAGTTTGCCTCTAGTTT
TCTTTTTGTTGTCTCCATAATAGAGAGTCCCCTTCGGGACGTCTTTGAAC
CCAGAAATATGGCGCGCCAAAAGGCTTTTTAATACCAACTTTTTTTTATA
ATACCAACTTTTTTTTATAATACCAACTTTTTTTATAATATCAACTTTTT
TTAATAATNTTTATAATACCAACTTTTTTTTATAATACCAACTTTTTTTA
TAATATCAACTTTTTTTAATAATGCCAACTTTTTTTTATAATACCAACTT
TTTTTATTATAATACCAACTTTTTTTTTTATAGTAGAGTCCCCTGCCCAG
TTGGCGACCGAACGTCTTTGAACCCAGAAAAGTCATACATAAACAAACCT
CTGGAGAATTTCTTTTGGTAGTTATCTGCCTTGACCTATTTCCCGTACTG
TGTAAAAAAGGTTTTAGAAAAAAACGAGTAGAATCCGAAAGATCCAACTT
TGCACGGAAGCACACGAAAAAGCCGGATTTTTCAAAAAAAATAAAAAATG
GCTACCTGTGGACAAAAAATCTTCGTAAGAAAAAACGCTTCAACTCCCAC
GCCAAAAAATACTTGTCCAAAACATTGAGTATGTTAGAAAGCATTTCTGT
AAAAATCAGCTCGATACAGTTTCCTTCGTGTGAAATATTGATAAAAAAGT
TGATGCAATCAGCTTCGAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCCAACCGGAAGTCGTTAC
TAGAGCGCAACCAGTCCTGATTACCCATGATTCATTTCGAGTGTGAAATG
GCCTATTTGTTGCCAACCAAAATCCATCAACCGAAATTCGAAGTTTCCAT
GGAGACGATAAAAAGTTGCGCTTGAAATCGAAAGTGCCTTCTAGTCTTTA
CTGAACTCAGCGTCATTGAAATCATCAAAATGCAAAGTTAATCCAAAAGT
AGACTCTAGTCTAGATTACACTAGGCTCGATACGCCAATACGCCAGCCAG
CCATCGAAATGTTAGACTAGAGTATACTTTTAGACCAATTCCCTTCTTGG
GATGGTAATTATTATTAGGACTAAGTTTTGGACGGGTATTTACTGTCAGT
ATTTGGCCTAAAATTGCTGACATGGGGAATAAACTTTTAAATCTGATACA
TAGATCAAAACGCTACCAACAGCTGGAAACAAAACCTTTAACGATCGATT
CACCTATCGACCTATTATTTTAACGCGAAATTTAAGACATTTACTTTCAC
ATGTAAACAAAAAATATTTTCCAGTGAAGAACCGTAAAGGTCCGTCTATA
TGGTGAAAAAAGAAAATTGACTAAGCGAGACCAAAAAAATTTATATCATA
AAAATGAAAGTTAGTGTTATAAAAAAAAAAGTTGATATTATAAAAAAAGT
TGGTATTATAAAAAAAAGTTGCTATTTAAAAAAAATCTGATATTATAAAA
ATGAAAGTTGGTATTATAATAAAAATTTGGTATTATAAAAAAAAGTTGAT
ATTATAAAAATGAAAGTTGCTATTATAAAAAAAAGTTGATATTATAAAAA
TGAAAGTTGGTATTATAAAAGTGAAAGTTGGTATTATAAAAAAAATTTAG
TATTATAAAATAAAGTTGATATTATAAAAAAAAGTTAGTATTAAAAAGCC
CTTTGGCGCGCCATACAGAAAAGTCATACAATAACAAACCTCTGGAGAAT
TTCATTTGGTAGTTATCTGCCTTGACCTATATCCCGTACTATGTAAAAAA
ATTCTAGAAAAGAACGAGTAGAATCCGAAAGATCCAACTTCACTTAAACA
CATGAAATAACCGGATTTTTCGAAAAAAATTAAAAATGGTGTGGACAAAA
AAGCTTTGTAAGAAAAAACGCTTCAACTGCCACTCCAAAAAATACTTGTC
CAAAACAATGAGTACTGTGAAGTCAGGTAACTTGCATCAGTGGAGGCTAA
CATGCATAGCCCTTAAATGACTGACCAATAATCAAAGCTGCAAAATTTCA
AAACAAATGAACTACACAGCTTCGCTCGCAGGGCAGCTCTACTCTACTAT
TTTTGTTTTGATTTAACTTTGTATTTAAAGGACCAGACAGGTCATTCATT
TGAGGGCTATGCATGTTAGCCTCCACTGATACAAGTTACTATCCGACTTC
ACGGTATGTTAGGCGACAATCACAAATATCTTCGTTTCGCGTCGCACGAC
CGACTCTCGAAAAATTGAGGAGAATTGAGTCGGTAAATGTGTCGGACTTT
TTCTTTCTTTCGTTCAAAAACTTTATTATTGCCAATTTTTTGCGAGTGAT
TTCTAGCGCATTTGCGGCATTTTGACTTTGTTTATCATTACATGCGCAGT
TTTTGATTGTCAGAGGTCACAGTGTTCAAAGGTCATAATTGGAAACCACC
CATAACACGTGGTTGTTTTGGGCTGGCTGGCTGGCTGGCAGTTTCATTCA
AGAATACACTCCAAAAATGGATGATAGAGGTAAGAAAACCCGAAAATTTT
TACGACCGACCAACCGACCAACCCACTTTTTAGATGAAGATATTTGTGAT
TGCTGCCTTAGAAAGAAAGCATTTCTATAAAAATCAGCTCAATACAGCTT
CCTTCCTCTGAAATATTGATAAAAAAGTTGATGCAATCAGTTTTGAAATT
AGATGCCCTGTCTGCGACCAACAAAATCGAAAGTAAGAAAAAGAAGACTC
TACATTGTGATCAAAACATTCCAGACACAGAGAAAAAAAGAAGACTTTAA
AATGCGATCAAAACATTCAAGGGACATGCCCGCGGTCTTCAACTTGACAG
TTCTAATGCGAAGTTTAAGGCGCTTTGGTATAGTGGTCATCGACCTTGGT
TAATGTACAGGCGACTGAGGTTCGAATCCCACTTGCAGCAGTTCACTTGG
CAAGTGAATGAACCTTTGCCTGGGTCAACCCATGCCATGTGAGGGGAATT
GGGTAGTCAGTTCAAGGTGCTGACGGGGCACTATAATTGAAAGCGTCTAT
AGTTGCGAAAATGGGTCTCAAAGCCTCCTGCGACTCAACCAAATAGAAAT
AGAGAAGAAAAAAATCTCTTTGACAATAAATTTGTTTTGATAACTCCACC
AAGTTTATTAATCTTACTTCTTTGTTCCTCTTAGAGTGCACACACACTCG
CCTGTGTTCCACTACGGATTTTTCTCATATTTCAATTTAAAAGCTTACTC
GGTGCGAAAGAGAAATTGTGTATTTTTAATACGCCGTTCATTAACTCAAA
TCAAATGTCTTTGGAGGTTCAGTGAAATGGTGGCCAAATTGCCGTCCCAT
GTTTTGTCAGATAGTTCCAAGTATTATAGCTCAAATAATGTGAATACGCT
ACTCTCACCAGGTAGGCGTTCACACCGCAAATGGAACAAATCTTTGCGAC
AAGAAACACGTAAATGTGATCGCACGCATTCGCACAAGCGTCCAAATACA
GATATAAAAAAGTCTGTTTTTCCGTGGAAAATTGTGAGTACTGTTATCGA
CACTCGGTAACTTTGACATGTCAATCAATTGCGCACACTGGAAAAAAGTC
TCTGAATATTTCATTCTTCCCAATAAATGCGAAAATGAAAAACGAAGAAG
CTTTCGTTTTCTGATCGTCTTTTTAATCTGCCATGAAGTGTTATAAAATT
CCTTATAGAAAGACACATTCTTCTCACAGACCTGAGGTGTGCATCTAAGA
ACCGGTTTGATTACAATTCTAATTTGTTATTTAAAAACAAATGATATATA
TTAAGTCTTTTCCACACTTTATTAAGTTTTTCTTTAATTAAGTGAATGGA
GGTCTTATCGTTGCAAGATCTATTTTAGTTAGTAGGCCATTTTTGAAAGG
CAACCTTGAAAGATTTAACTTTATTCCATGAGGCAATTTTATCCAAGGCA
AAGGGAGATGTAAAAATCATTCGATTTCAGATGAAAAAAATGGCACATCA
AAAGAAAATTTGTTGCTGAATAGGGCACCTAATTCATAGCAAAGTCTTAG
GGGTACCTTGTAATCATAGAGAATTGATAAATGGGATTAATTTATGACAC
CACTGGCTATCATTAATGTTGTTTAAATTCGTGATCTCTTTATTATATAT
GAAATGATTAATTATTTTTCAAAGGTGGAGGATTCAGTGGTTTTGGTGCA
AAAACAACAGCGTCAACAGGATTCTCTTTTGGAACTCCATCAACTGCAAC
AAGCACAGGGGGAGGACTCTTTTCAGGATTTGGTTCAACAACCAAAACAA
CAGCTTCTACAGGTTTTGGTGGATTCGGCACAGGAACAACAACTGGTTTT
GGAGGATTTGGTGCCAAAACAACAGCTTCCACATTTGGTGGGTTTGGAAC
AACAACTACATCTGCCTCAGGTAGTAAGTTATTCTCATTATTGTTTGAAT
AAGTTTTCATATTATTTTTTTATGAATGATAATCTGCAATATTCTCTTGA
TAACAAAACCTCAGTTATATGGTAAGTAAATATATTCATCTGGTGGCTGA
GTGTGGAGCCAGGAGAGAGGGAGTCTATCCCCTTTTCTATTTTGCGCTAG
TACAGGGAGATCGAATGCTGAAGTGGAGCGCCACACCTACTCTTAGCTTC
CAGTAACTTACCACCCAAATTGATGAGTTGAGTGAAATCGGTGAGTTGGC
GGTGACCGGGGATCAACCCACAACCCTCAGATTGTTTGGTGAATGCAGGC
CACACAGTCATATTTACACTAGCATATTTTATACCTATGTATAAATTTAC
CTTTTTTCTCGATTTTACTTAAAGCCAGGGATACGAAAAAATAAAAAAAA
CGGCTGAGAAAAGGCTGATCAATTAAAGACATAGAAATCACTTCTTCCTG
TCGTTTCCCAATTGTTTAATCTAAAATATCTTACCATGTAAAATCCTGCT
ATTTGAAAATTTGAAATCTATTTATTTAAAAGTGTAGGTGCAATGTACAT
ACATACTTTTGATAGAAATTTTTATATTAACATATCATTTGATATTAAAT
TTCTCATCGTTCTTTTCAGGATTTGGTACAACCGGCAGTCTATTTGGTGG
TAGGTATCTTTGTGGTCAAATTTGGTCAATTCTCAACAAATTCTGAAGAA
ATTCTGAAGAATTCTCGAAAAACTGTTTCTGTTATAAATCTTATCAGAGT
AAGGTTTCAGTTATTGAAGTTTTCTTTGTGTATATTTTATGGCCTTTGAT
TTTTAGGGTTGAACAAAACAACAACAGCAAGCACTGGTTTCTCTCTTTCC
AATCCCACCCAAACAGGATGGAATGCTGGTACGACACGTAGTTCTTCTTT
GTATTATTTTGTCAAGTAGCAAATGATCATTTTCATGATGTAGTTTTTTC
TCAAGTTTCCAGTTTATAACGTGTCATCCACTTAACATCAGTTTCTGTCA
GTTTTGATGTAAAATCTTATCCTCTCAAAAAATAATTTACTCAGTGGTAA
AAAACGAGATTGTCAACTTGTTTAGGTCAACAACAACAGCAGCAAGCTCA
AGGTTTGGACAATCCATTGGCAAGCATGACCAGTGCACTGACAATGCCCA
CCATCTTTGGTGACGAGCGAGATGGCATCATTGCCAAACTGAACCAATTG
CAAGCATTGTGGGGTGAAGGGAAAGCTGTTTATTCACACAACGCACAACC
TATTCCATTGTCACAAGAAAACCCTTTTTCACGATTTAAGGTACGGCTGT
TCAGTTGATTAATTGCTATTTAGGAACTTTTAATGAATTTTACTTTTCGA
GACACTATTAATATTATTGCTTGGTTTCTGCCAATATAACAAGAGTGAAG
CTTTTGGCTCGATGCTAGTGGGTTTTGTTGTGAATAAGAAAAGTAATAAG
CAGCTCTTTGCATGCTATGGTGATTACAAACACTAAAACGTAATAATATC
CAATCTTTATCACTGACAGACGATAGGTTACAGTTGTTTACCATCTGCGA
AAGACAGTGATGGTTTCATTTCGTTCGACTTGAAACACAAGGAAGATTAC
GTGAAAACCAACCAACAACAATTTGTCGAATCCATCAGTAAAATCATGGG
CAACAAACCGACATTCTCCGTATGTGTTGATGGATTACGCAGTCTTCCTG
GTGACAGGTAAT Coding sequence (CDS) from alignment at scaffold_507:43385..49996- >TCONS_00069764 ID=TCONS_00069764|Name=TCONS_00069764|organism=Clytia hemisphaerica|type=CDS|length=5238bp|location=Sequence derived from alignment at scaffold_507:43385..49996- (Clytia hemisphaerica)
ACGATAGGTTACAGTTGTTTACCATCTGCGAAAGACAGTGATGGTTTCAT
TTCGTTCGACTTGAAACACAAGGAAGATTACGTGAAAACCAACCAACAAC
AATTTGTCGAATCCATCAGTAAAATCATGGGCAACAAACCGACATTCTCC
GTATGTGTTGATGGATTACGCAGTCTTCCTGGTGACAGGTAAGTCAACAA
CAACAGCAGCAAGCTCAAGGTTTGGACAATCCATTGGCAAGCATGACCAG
TGCACTGACAATGCCCACCATCTTTGGTGACGAGCGAGATGGCATCATTG
CCAAACTGAACCAATTGCAAGCATTGTGGGGTGAAGGGAAAGCTGTTTAT
TCACACAACGCACAACCTATTCCATTGTCACAAGAAAACCCTTTTTCACG
ATTTAAGGGTTGAACAAAACAACAACAGCAAGCACTGGTTTCTCTCTTTC
CAATCCCACCCAAACAGGATGGAATGCTGGATTTGGTACAACCGGCAGTC
TATTTGGTGGTGGAGGATTCAGTGGTTTTGGTGCAAAAACAACAGCGTCA
ACAGGATTCTCTTTTGGAACTCCATCAACTGCAACAAGCACAGGGGGAGG
ACTCTTTTCAGGATTTGGTTCAACAACCAAAACAACAGCTTCTACAGGTT
TTGGTGGATTCGGCACAGGAACAACAACTGGTTTTGGAGGATTTGGTGCC
AAAACAACAGCTTCCACATTTGGTGGGTTTGGAACAACAACTACATCTGC
CTCAGGTAATGCCGTTTTCTTTTGGCAACACGAGCTCTTCTTCAACCTCA
GGATTTGGTGGATTTGGAGCTACATCAAAGCCTTCAACAACAGGTTTTGG
AGGATTTGGATCAACCTCCACAGACGATAGGTTACAGTTGTTTACCATCT
GCGAAAGACAGTGATGGTTTCATTTCGTTCGACTTGAAACACAAGGAAGA
TTACGTGAAAACCAACCAACAACAATTTGTCGAATCCATCAGTAAAATCA
TGGGCAACAAACCGACATTCTCCGTATGTGTTGATGGATTACGCAGTCTT
CCTGGTGACAGGTAAGTCAACAACAACAGCAGCAAGCTCAAGGTTTGGAC
AATCCATTGGCAAGCATGACCAGTGCACTGACAATGCCCACCATCTTTGG
TGACGAGCGAGATGGCATCATTGCCAAACTGAACCAATTGCAAGCATTGT
GGGGTGAAGGGAAAGCTGTTTATTCACACAACGCACAACCTATTCCATTG
TCACAAGAAAACCCTTTTTCACGATTTAAGGGTTGAACAAAACAACAACA
GCAAGCACTGGTTTCTCTCTTTCCAATCCCACCCAAACAGGATGGAATGC
TGGATTTGGTACAACCGGCAGTCTATTTGGTGGTGGAGGATTCAGTGGTT
TTGGTGCAAAAACAACAGCGTCAACAGGATTCTCTTTTGGAACTCCATCA
ACTGCAACAAGCACAGGGGGAGGACTCTTTTCAGGATTTGGTTCAACAAC
CAAAACAACAGCTTCTACAGGTTTTGGTGGATTCGGCACAGGAACAACAA
CTGGTTTTGGAGGATTTGGTGCCAAAACAACAGCTTCCACATTTGGTGGG
TTTGGAACAACAACTACATCTGCCTCAGGTAATGCCGTTTTCTTTTGGCA
ACACGAGCTCTTCTTCAACCTCAGGATTTGGTGGATTTGGAGCTACATCA
AAGCCTTCAACAACAGGTTTTGGAGGATTTGGATCAACCTCCACAGACGA
TAGGTTACAGTTGTTTACCATCTGCGAAAGACAGTGATGGTTTCATTTCG
TTCGACTTGAAACACAAGGAAGATTACGTGAAAACCAACCAACAACAATT
TGTCGAATCCATCAGTAAAATCATGGGCAACAAACCGACATTCTCCGTAT
GTGTTGATGGATTACGCAGTCTTCCTGGTGACAGGTAAGTCAACAACAAC
AGCAGCAAGCTCAAGGTTTGGACAATCCATTGGCAAGCATGACCAGTGCA
CTGACAATGCCCACCATCTTTGGTGACGAGCGAGATGGCATCATTGCCAA
ACTGAACCAATTGCAAGCATTGTGGGGTGAAGGGAAAGCTGTTTATTCAC
ACAACGCACAACCTATTCCATTGTCACAAGAAAACCCTTTTTCACGATTT
AAGGGTTGAACAAAACAACAACAGCAAGCACTGGTTTCTCTCTTTCCAAT
CCCACCCAAACAGGATGGAATGCTGGATTTGGTACAACCGGCAGTCTATT
TGGTGGTGGAGGATTCAGTGGTTTTGGTGCAAAAACAACAGCGTCAACAG
GATTCTCTTTTGGAACTCCATCAACTGCAACAAGCACAGGGGGAGGACTC
TTTTCAGGATTTGGTTCAACAACCAAAACAACAGCTTCTACAGGTTTTGG
TGGATTCGGCACAGGAACAACAACTGGTTTTGGAGGATTTGGTGCCAAAA
CAACAGCTTCCACATTTGGTGGGTTTGGAACAACAACTACATCTGCCTCA
GGTAATGCCGTTTTCTTTTGGCAACACGAGCTCTTCTTCAACCTCAGGAT
TTGGTGGATTTGGAGCTACATCAAAGCCTTCAACAACAGGTTTTGGAGGA
TTTGGATCAACCTCCACAGACGATAGGTTACAGTTGTTTACCATCTGCGA
AAGACAGTGATGGTTTCATTTCGTTCGACTTGAAACACAAGGAAGATTAC
GTGAAAACCAACCAACAACAATTTGTCGAATCCATCAGTAAAATCATGGG
CAACAAACCGACATTCTCCGTATGTGTTGATGGATTACGCAGTCTTCCTG
GTGACAGGTAAGTCAACAACAACAGCAGCAAGCTCAAGGTTTGGACAATC
CATTGGCAAGCATGACCAGTGCACTGACAATGCCCACCATCTTTGGTGAC
GAGCGAGATGGCATCATTGCCAAACTGAACCAATTGCAAGCATTGTGGGG
TGAAGGGAAAGCTGTTTATTCACACAACGCACAACCTATTCCATTGTCAC
AAGAAAACCCTTTTTCACGATTTAAGGGTTGAACAAAACAACAACAGCAA
GCACTGGTTTCTCTCTTTCCAATCCCACCCAAACAGGATGGAATGCTGGA
TTTGGTACAACCGGCAGTCTATTTGGTGGTGGAGGATTCAGTGGTTTTGG
TGCAAAAACAACAGCGTCAACAGGATTCTCTTTTGGAACTCCATCAACTG
CAACAAGCACAGGGGGAGGACTCTTTTCAGGATTTGGTTCAACAACCAAA
ACAACAGCTTCTACAGGTTTTGGTGGATTCGGCACAGGAACAACAACTGG
TTTTGGAGGATTTGGTGCCAAAACAACAGCTTCCACATTTGGTGGGTTTG
GAACAACAACTACATCTGCCTCAGGTAATGCCGTTTTCTTTTGGCAACAC
GAGCTCTTCTTCAACCTCAGGATTTGGTGGATTTGGAGCTACATCAAAGC
CTTCAACAACAGGTTTTGGAGGATTTGGATCAACCTCCACAGACGATAGG
TTACAGTTGTTTACCATCTGCGAAAGACAGTGATGGTTTCATTTCGTTCG
ACTTGAAACACAAGGAAGATTACGTGAAAACCAACCAACAACAATTTGTC
GAATCCATCAGTAAAATCATGGGCAACAAACCGACATTCTCCGTATGTGT
TGATGGATTACGCAGTCTTCCTGGTGACAGGTAAGTCAACAACAACAGCA
GCAAGCTCAAGGTTTGGACAATCCATTGGCAAGCATGACCAGTGCACTGA
CAATGCCCACCATCTTTGGTGACGAGCGAGATGGCATCATTGCCAAACTG
AACCAATTGCAAGCATTGTGGGGTGAAGGGAAAGCTGTTTATTCACACAA
CGCACAACCTATTCCATTGTCACAAGAAAACCCTTTTTCACGATTTAAGG
GTTGAACAAAACAACAACAGCAAGCACTGGTTTCTCTCTTTCCAATCCCA
CCCAAACAGGATGGAATGCTGGATTTGGTACAACCGGCAGTCTATTTGGT
GGTGGAGGATTCAGTGGTTTTGGTGCAAAAACAACAGCGTCAACAGGATT
CTCTTTTGGAACTCCATCAACTGCAACAAGCACAGGGGGAGGACTCTTTT
CAGGATTTGGTTCAACAACCAAAACAACAGCTTCTACAGGTTTTGGTGGA
TTCGGCACAGGAACAACAACTGGTTTTGGAGGATTTGGTGCCAAAACAAC
AGCTTCCACATTTGGTGGGTTTGGAACAACAACTACATCTGCCTCAGGTA
ATGCCGTTTTCTTTTGGCAACACGAGCTCTTCTTCAACCTCAGGATTTGG
TGGATTTGGAGCTACATCAAAGCCTTCAACAACAGGTTTTGGAGGATTTG
GATCAACCTCCACAGACGATAGGTTACAGTTGTTTACCATCTGCGAAAGA
CAGTGATGGTTTCATTTCGTTCGACTTGAAACACAAGGAAGATTACGTGA
AAACCAACCAACAACAATTTGTCGAATCCATCAGTAAAATCATGGGCAAC
AAACCGACATTCTCCGTATGTGTTGATGGATTACGCAGTCTTCCTGGTGA
CAGGTAAGTCAACAACAACAGCAGCAAGCTCAAGGTTTGGACAATCCATT
GGCAAGCATGACCAGTGCACTGACAATGCCCACCATCTTTGGTGACGAGC
GAGATGGCATCATTGCCAAACTGAACCAATTGCAAGCATTGTGGGGTGAA
GGGAAAGCTGTTTATTCACACAACGCACAACCTATTCCATTGTCACAAGA
AAACCCTTTTTCACGATTTAAGGGTTGAACAAAACAACAACAGCAAGCAC
TGGTTTCTCTCTTTCCAATCCCACCCAAACAGGATGGAATGCTGGATTTG
GTACAACCGGCAGTCTATTTGGTGGTGGAGGATTCAGTGGTTTTGGTGCA
AAAACAACAGCGTCAACAGGATTCTCTTTTGGAACTCCATCAACTGCAAC
AAGCACAGGGGGAGGACTCTTTTCAGGATTTGGTTCAACAACCAAAACAA
CAGCTTCTACAGGTTTTGGTGGATTCGGCACAGGAACAACAACTGGTTTT
GGAGGATTTGGTGCCAAAACAACAGCTTCCACATTTGGTGGGTTTGGAAC
AACAACTACATCTGCCTCAGGTAATGCCGTTTTCTTTTGGCAACACGAGC
TCTTCTTCAACCTCAGGATTTGGTGGATTTGGAGCTACATCAAAGCCTTC
AACAACAGGTTTTGGAGGATTTGGATCAACCTCCACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069764-exon-scaffold_507-1575043694:49855..49996 | TCONS_00069764-exon-scaffold_507-1575043694:49855..49996 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1575043694:45124..45372 | TCONS_00069764-exon-scaffold_507-1575043694:45124..45372 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1575043694:44448..44477 | TCONS_00069764-exon-scaffold_507-1575043694:44448..44477 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1575043694:44219..44290 | TCONS_00069764-exon-scaffold_507-1575043694:44219..44290 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1575043694:43807..44021 | TCONS_00069764-exon-scaffold_507-1575043694:43807..44021 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1575043694:43385..43577 | TCONS_00069764-exon-scaffold_507-1575043694:43385..43577 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1510915933:49855..49996 | TCONS_00069764-exon-scaffold_507-1510915933:49855..49996 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1510915933:45124..45372 | TCONS_00069764-exon-scaffold_507-1510915933:45124..45372 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1510915933:44448..44477 | TCONS_00069764-exon-scaffold_507-1510915933:44448..44477 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1510915933:44219..44290 | TCONS_00069764-exon-scaffold_507-1510915933:44219..44290 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1510915933:43807..44021 | TCONS_00069764-exon-scaffold_507-1510915933:43807..44021 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1510915933:43385..43577 | TCONS_00069764-exon-scaffold_507-1510915933:43385..43577 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1491911889:49855..49996 | TCONS_00069764-exon-scaffold_507-1491911889:49855..49996 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1491911889:45124..45372 | TCONS_00069764-exon-scaffold_507-1491911889:45124..45372 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1491911889:44448..44477 | TCONS_00069764-exon-scaffold_507-1491911889:44448..44477 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1491911889:44219..44290 | TCONS_00069764-exon-scaffold_507-1491911889:44219..44290 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1491911889:43807..44021 | TCONS_00069764-exon-scaffold_507-1491911889:43807..44021 | Clytia hemisphaerica | exon |
| TCONS_00069764-exon-scaffold_507-1491911889:43385..43577 | TCONS_00069764-exon-scaffold_507-1491911889:43385..43577 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_507 | supercontig | scaffold_507:43385..49996 - |
Blast
BLAST of TCONS_00069764 vs. Swiss-Prot (Human)
Match: NUP54 (Nucleoporin p54 OS=Homo sapiens GN=NUP54 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 8.992e-38 Identity = 61/123 (49.59%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 529 NPLASMTSALTMPTIFGDERDGIIAKLNQLQALWGEGKAVYSHNAQPIPLSQENPFSRFKTIGYSCLPSAKDSDGFISFDLKHKEDYVKTNQQQFVESISKIMGNKPTFSVCVDGLRSLPGDR 897
N L + SAL+ PT+ GDERD I+AK NQLQA WG GK +++N P+ +QENPF RFK +GYSC+PS KD DG + KE +++ QQQ VES+ K++G T +V V+G ++LP D+
Sbjct: 115 NQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPSNKDEDGLVVLVFNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQ 237
The following BLAST results are available for this feature:
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