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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069819 ID=TCONS_00069819|Name=TCONS_00069819|organism=Clytia hemisphaerica|type=transcript|length=276bp
CAAATGTTGAAGATCATATATCCTAATTTTGGCTGTGAAATCGGCGGTGA
ACTGGAaaataaattgcaaaatttgaaagagCTTGCTCAACTCTCCGACG
AATACAACGTATCAGCCATCACTCGAAAAATATTCCAAGAAGCATTAACA
ATGAGCAAATTATCCTTTGATGAATGGACATCTGAAAACGTCTGGCACTA
TTAGAAATTTCCGATTCTTTGGCTTGTAGTGAAGCTATTGAAGCATGTCT
CAAGTATCTTGTTGAAAGGGGTTAcc Run BLAST on NCBI transcript from alignment at scaffold_509:95623..96900+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069819 ID=TCONS_00069819|Name=TCONS_00069819|organism=Clytia hemisphaerica|type=transcript|length=1278bp|location=Sequence derived from alignment at scaffold_509:95623..96900+ (Clytia hemisphaerica)
CAAATGTTGAAGATCATATATCCTAATTTTGGCTGTGAAATCGGTATGCG
AAatcttttcttgattttgatttgaTACTGATcatttttctggaaaataa
tTACGTCTTGTCTTGGTGATTCAGAACACTTTCTCAAGTAACAAGTTGCA
GTCTTAacatgtactcttaggtgccaaataaacggaccccccgcttgtta
atttttcgatctttttccaactcccccggaccttattaggaccccctcgt
ttattaatttttgaaaaaaaatcccagctaccaaaaggaaagttccttgt
tttactctaagaagcctaaatttagtctattttgacccttttaagggttt
tttaggttttttaaggtccattttccaaccccctcggtaattaggtcccc
ccgtttatttaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
aaaaaaatttttaaatgaagataaaaaacttTGCTTGTATTAAAAGTTCT
GTAGACAACCTGGTTTATCACTACAacgtgtcccaaaaaaagcggacaaa
ttttatataaagtaaaagcACAAAACTCATCATATTAACTGGACTTTGAA
ATAAGATCGAAATTCTCTGCTCAATTAATAGATATTAAGCATACAAGTCA
TAGAATTTTGCATAAATCATGAGCATTTTTACTTTACATaaaaatttgtc
atattttttggGACAAAATGTATGTCTTTCGCAATTCTATTTTAGGCGGT
GAACTGGAaaataaattgcaaaatttgaaagagCTTGCTCAACTCTCCGA
CGAATACAACGTATCAGCCATCACTCGAAAAATATTCCAAGAAGCATTAA
CAATGAGCAAATTATCCTTTGATGAATGGACATCTGAAAACGTCTGGCAC
TATTAGAAATTTCCGATTCTTTGGCTTGTAGTGAAGCTATTGAAGCATGT
CTCAAGTATCTTGTTGAAAGGGGTTAcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069819-exon-scaffold_509-1491911889:95623..95665 | TCONS_00069819-exon-scaffold_509-1491911889:95623..95665 | Clytia hemisphaerica | exon |
| TCONS_00069819-exon-scaffold_509-1510915933:95623..95665 | TCONS_00069819-exon-scaffold_509-1510915933:95623..95665 | Clytia hemisphaerica | exon |
| TCONS_00069819-exon-scaffold_509-1575043694:95623..95665 | TCONS_00069819-exon-scaffold_509-1575043694:95623..95665 | Clytia hemisphaerica | exon |
| TCONS_00069819-exon-scaffold_509-1491911889:96668..96900 | TCONS_00069819-exon-scaffold_509-1491911889:96668..96900 | Clytia hemisphaerica | exon |
| TCONS_00069819-exon-scaffold_509-1510915933:96668..96900 | TCONS_00069819-exon-scaffold_509-1510915933:96668..96900 | Clytia hemisphaerica | exon |
| TCONS_00069819-exon-scaffold_509-1575043694:96668..96900 | TCONS_00069819-exon-scaffold_509-1575043694:96668..96900 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_509 | supercontig | scaffold_509:95623..96900 + |
Blast
The following BLAST results are available for this feature:
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