TCONS_00069967 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069967
Unique NameTCONS_00069967
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1734

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069967 ID=TCONS_00069967|Name=TCONS_00069967|organism=Clytia hemisphaerica|type=transcript|length=1734bp
GGCAAATGTGACTTTTCAAAGATGTTCAGTTCTTGACAAGGCCATAAAGC
TGGAAAAGAATATCGTCATATGCAAGCCATACGGCAATACCTTGTTTGCT
GAGAATTTGCAGTCAATAATGGAGCATTGGTTAAATGACACCGTAATTGA
TTCGCAAATGAAATATTACTTTGCCCAACATaatcctCGATTTAGTTACA
TCGAAACTGGAATAATGAGCAACTTGATGAATGAAGATCGCCCTTTCCTT
TCTCCGAATTACAAGAAAAAATTTCAGGAGTTATTTTCCAACGAGCAATT
GATTGGATTGTATTCTTCAGCCAAGCATTGGCGTCTTATGGTGAGCAATT
ATATTAACCGTTTAAAAATTAACGTTATGCATAAAAATCATGTGTAAAAC
TTCTTTTACAAAATCGGTAATATTTGTTATTTATAAGTGTTATGAGCAga
ctttgaattgtttttgaatgaGGGGCAGCAGTGGTTCTAAGATTTCCTGG
AAATTCCTAGGCTCGGATTGTTAATTTGTTCTTGATTTTATCCAAAGTTC
AGTctcgtattcttataaagatattcttataattaattaTATACTTCATC
TCCACTGACTCTAAGGCTACTCAGCTAGTATGCACTGAATAGAAAGGGTG
GAAATTAGGATCCATTAATTATTATGATTCATTACCTTAGATCAGAGGAT
GTTCTTTAAATTTAGGTCATTTACCCAAAACAACGCGAGGTATTATTGGT
AGATCCTTTTGGTGAAACTAGATCCACATTAAGGCAAACAAAACAACTTT
GGGAGGCAAGCATGACAAGACATTTCGAAGGTGTACAAACGTGGCAAATA
AATTCAACCCAACACCCGAAACAAACTGATATGATATCATGTGGCGCGTT
TTGCTTAAAGTTTGCAGAGTGTATCTTGAAGGGGGAAGATCTTCCAGCCA
ACATTTCATCATGTGACATGAATGATTTTCGCCGCGAAATTGCTATCAAC
CTCATACAAATAGGCGGTGACGGTGATTGGTGCAGAAATATATGCCGCTT
ATGTGATCGAACCTCACCACCACCATCAAAACGTGCAGGAACGAACCCGA
AGGAATGGGGATGGGTATGTTGTGACAAATGTGAGCCAGAAATGTGGTAC
CATGGGGTTTGTCTTGGAATAAGAAGGAGCACCGAGCACCTGAAAAACGT
CTCCTTTTATTGCAACAAACCGGTGGTCCAAGATGAAATCCTTGCTTTGG
AAGTTGGCGAGACGTTGATCCGTCAacgaaaaaacagaaaaatttccaaa
tgcTACGGGTGTAGTGTACCAATCAAAAACGCGCCATTGGAAGCGCCATA
CGACATGGTACTTGTACAGAAGATGCTGGGTCCGAGAAAGGGTGGTAAGA
TCACAGACGACCCCAGCACTTTTGTCAACTACGTCTGCAATTACCACCCG
GATAGAAAATGCACAACAAAAATCAATATCGTTAATGATAAGATAAAGAT
CTCCAAAGACTTCAAAACCATCGAAGTCAGTCATCAAGAAAAACTGGAGG
ATCTAGGTATTGACATTAGTGTGTTGAATTGATGATTTGTTTGTGGTTAC
ATGgtttctgcccccccccccccccttcttaaaataaggggactcaaaaa
atgcctttttaaaaTGGGGGGCTTTCTATCTTGGGTCTTCTAATATCCCT
TATTAAGAGAGGATTCATTCATATCATTCAAAAG
Run BLAST on NCBI

protein sequence of TCONS_00069967-protein

>TCONS_00069967-protein ID=TCONS_00069967-protein|Name=TCONS_00069967-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MTRHFEGVQTWQINSTQHPKQTDMISCGAFCLKFAECILKGEDLPANISS
CDMNDFRREIAINLIQIGGDGDWCRNICRLCDRTSPPPSKRAGTNPKEWG
WVCCDKCEPEMWYHGVCLGIRRSTEHLKNVSFYCNKPVVQDEILALEVGE
TLIRQRKNRKISKCYGCSVPIKNAPLEAPYDMVLVQKMLGPRKGGKITDD
PSTFVNYVCNYHPDRKCTTKINIVNDKIKISKDFKTIEVSHQEKLEDLGI
DISVLN
Run BLAST on NCBI

transcript from alignment at scaffold_511:504588..511592-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069967 ID=TCONS_00069967|Name=TCONS_00069967|organism=Clytia hemisphaerica|type=transcript|length=7005bp|location=Sequence derived from alignment at scaffold_511:504588..511592- (Clytia hemisphaerica)
GGCAAATGTGACTTTTCAAAGATGTTCAGGTGAGAGAAGATTAAAAAGTC
GACGTTTAAAGAGTGACCAGAAATTTTGGTTGAGTAAAAATTTTGCTAAA
GTTTGCTAAAAATCCCGTAATGAAACTCTTAAATGGAAAATATGCATTTA
ATTGAATGTATATTTCATCTATTAAAGGATCAAAGAGTGATAGCTGCTTC
GTTAGATTGGCACCAAGTGAAGGTATTTCAAAGGAAAAATACTATAGCTT
TCAGAAACGATGACGAATAACTTCTAAATAAATTCAATGCAACGGTTTCG
TTTTTCTATATTCTATATTTAAATTGTAGTCGTTTGAGCAGATGATCTTT
TTATTTTATAAAACTAAAGATACTAGGTTTGAGAGGAAAAAATTAATGTT
CATTATCAATCAGTCATATATTTTTTAGTTGGATAATTTCTATATATACC
ATTTTTCTTTCTTTCGAGTTCTTGACAAGGCCATAAAGCTGGAAAAGAAT
ATCGTCATATGCAAGCCATACGGCAATACCTTGTTTGCTGAGAATTTGCA
GTCAATAATGGAGCATTGGTTAAATGACACCGTAATTGATTCGCAAATGA
AATATTACTTTGCCCAACATGTGAGAATCTAACCAATACTTTTTTTGTAT
AAAACTTTTAAAAATTGAGCATTAAATGAATGTTTAACACCCGATATAAT
CTAAACCTTTTTTCAAACGATTTGAATTTTTTAGCCCTTAATGCCCTTAA
TTTTCGCGCACTACCACTGTGCGGAAATTAAAGGGTGCGCGAAAAAGGCC
TATTTTTGCGCACTAGGCCGCGCGAAAATTAAAGAGATGTCATGGAGTTT
TTACAAGATACTTCACTAATTGGTCATTTAAAGTAATGAGATGACGCGTT
CTTTAGAAAAAGTACTAAGATTCTTTTATTACATCTTAACGACCAACCAA
ATCAAATATGAGCTTGTATAAACTCCAGCTTGTCCCAAATTAAAGGTGCA
CGAATTAGCAAATAAATTAATAAAACCAATTAATCATGATTTTTGATAAA
AATATGATATTCATAGTACAGTGGAGCCTCTAATTATTGGACACCATTGG
GGAAACAGATTAGTGTCCGCTACTTAAAGTGTCCGCCTTATGGAGACTTT
TCTATGAGGATTTGACTAGAAAACGACCAGAAAAAGATACGTAAAATATG
TAAAGAGAAGCAAATTATAATAGGGTTGCGCGAAAATTAAAGGGTGCGCG
AAAGGTCATTTTTAAGGGGTGCGCGAAAATTAAAGGGATCGAAAATAAAA
GGCGCGCGAAAATTAAGGGCATTAAGGTATTATTTTCACTTGATTTTATC
CACTTTCAAGTAATGATTTTCTTTTTTAGAATCCTCGATTTAGTTACATC
GAAACTGGAATAATGAGCAACTTGATGAATGAAGATCGCCCTTTCCTTTC
TCCGAATTACAAGGTAATGTTATTTGAGCAGAAAGGATGGAACTTAGGAT
CCATTAATCATTATGATCCATTACCTTAGATCAGAGTTTGTTCTTTAAAT
TTCTTCAAACTTACTTAGGTCCTTCAGATCCCTCACATCGATCCATTTCA
CCTCGCTACCACGGTTCAAGTTTTGCTAAAGTTCTACAAAACCATGAAAT
TGCTATTTTGAAATTCCGAACTTTTCCTTAAGCTTAATCATTGTTAAATC
AAAGCTTCCATTTAAATATAAAATTCCTTCCAAATGTAGAAAAAATTTCA
GGAGTTATTTTCCAACGAGCAATTGATTGGATTGTATTCTTCAGCCAAGC
ATTGGCGTCTTATGGTGAGCAATTATATTAACCGTTTAAAAATTAACGTT
ATGCATAAAAATCATGTGTAAAACTTCTTTTACAAAATCGGTAATATTTG
TTATTTATAAGTGTTATGAGCAGACTTTGAATTGTTTTTGAATGAGGGGC
AGCAGTGGTTCTAAGATTTCCTGGAAATTCCTAGGCTCGGATTGTTAATT
TGTTCTTGATTTTATCCAAAGTTCAGTCTCGTATTCTTATAAAGATATTC
TTATAATTAATTATATACTTCATCTCCACTGACTCTAAGGCTACTCAGCT
AGTATGCACTGAATAGAAAGGGTGGAAATTAGGATCCATTAATTATTATG
ATTCATTACCTTAGATCAGAGGATGTTCTTTAAATTTAGGTCATTTACCC
AAAACAACGCGAGGTATTATTGGTAGATCCTTTTGGTGAAACTAGATCCA
CATTAAGGCAAACAAAACAACTTTGGGAGTAAGTAAAGCTTGGTCCTCAC
TTGTTGAAAAAATCGCGTCTAATCACTAGACGCCCGCGTCGAGTCCTTAA
AGCTTGGTCCTCACTTATTGAAAAAATCGCGTCTAATCACTAGACGCCCG
CGTCTAACATTAGACGCGCGCGTCGAGTCCTTAGGCGCGTGCGTCTAGAA
ATTATGTCTTTGTTGTCCTCACTACCATGATTTTTTCAACAAATGAGGAC
CAAGCTTAAAAGCTTTGCTGTATAAGTATATTGTGTTTTGTCACGCTGTT
AAAGATTCCATCTGACCACTAGGCTACTTTCAGCAGTTTCGATTGTCTTT
TATGAATAAGAAGACTTTCTTGTAGCCTTGTAGTACTTGACATAGTGTGC
ATCCCTACTTCGTACTCTTTCTTAATAATTTTGGTAGGTGGTTAAGCGAG
TTTCCTTCGAAACGGATTTTCTTCGAAACGAATTTCCTTAAAAAAAGGAG
GATAACATTTCATTACAGAAGGGGAATGGGTATATAGGGGGATGAAATAA
ACCTAGGAGGCTCATACCCTCTGCAAACTTTGACTGAATCTTTTCTACCT
TTTTAGGGCAAGCATGACAAGACATTTCGAAGGTGTACAAACGTGGCAAA
TAAATTCAACCCAACACCCGAAACAAACTGATATGATATCATGTGGCGCG
TTTTGCTTAAAGGTAAGGTTTTCCTTGTGCTGGAACTAATAAAATTCACT
ACTTCGACATCAGATGTTCTGACAGGTGTCCTTGAATTCAAACTTACTCT
CAGGTCTCTAATAGTTAGGTATTTTAGCATGTTTTCTCTGCATCCAAAAT
AGTTATGCTTTGTTTACTGCTTTTTTTAAATACGTTTCATTATGTTTTAA
TAGTTTGCAGAGTGTATCTTGAAGGGGGAAGATCTTCCAGCCAACATTTC
ATCATGTGACATGAATGATTTTCGCCGCGAAATTGCTATCAACCTCATAC
AAATAGGCGGTAAGCAAAATTTTTGTTGCTGTAGGAGAGAATTTTGAAAT
GCAAGTGAGAGATAGCATCCTCCCTGGTAGATCTTTTAAATAGTGATTAT
TATCCACAAAACGCGACTATTACAATATATTTAGATTATCCAAACTCCGC
TCTTTTTTATGTTCAAATATTGACTGCGTTGCAATACACTGGGGGATCAG
TGTACAATGGTGGATATTTCAGAATTTTTTTGCTGTGTATTCGTTGTACC
TTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGCGGATGGCTGGAAAA
ATTAAATTTGAAGGGAATTTAATTTGGCGGTTGCAGGGTATTTTTGGCCA
AAATCGTTATCAAATAAACAAAAAAACCTGTTTTAAGGCTTGAAATAGCA
CCAATTTGGGGAATGCGTTAAATAAAATAAATTTGACAGAAATTTAATTT
GGCGGATGGAGGAAAGAATAAATTTTTGGCGGGAAATCGATTTGGCTGAT
TTTGGTTAAATTTTCTTTCCGCAAAAATTTGTTCCTTTAAGGTAGTGGTA
GTCACGTCAAAATCTGTTTTGACGTAAAAAATTGAAAAAAGCTTTCATGT
ATTCATGTATTCTGTATCTGTAAAAATTGGATGAATTTTAAGCTTTTCAG
TGGAAATTTTTAAGGAGTAAGTATATTTGGAAGCTTGTTGGCTAGTACTT
GTATTACAGTCAACACAACGCAACAGTCTCGAACACCCGCTATCTCGAAC
TTTAACTATCAAACTTTTTCCTCTGTGCCTTGAGGCACATTCTAGGCTAA
TTAATTAATATAATTTTTTTAGTGTATTTAAAGTCAGAAGGTTGGGGTTA
TTTTTAAACAGCTATTGTGTCGCTGTAGATTGTTTTATTTAATGTTCACA
CATGATTCAATAACAGGTGACGGTGATTGGTGCAGAAATATATGCCGCTT
ATGTGATCGAACCTCACCACCACCATCAAAACGTGCAGGAACGAACCCGA
AGGAATGGGGATGGGTAATTATTAATTTAGAAAGTTAGGAAGACATTCAC
GCTCGGGTGCCTAACCGGACCTGTTTATATTAATTTTTGAAAAAAAATCC
CACTTGCGGAAATGAAAGAAATTTTTTCTCTAAACAGCCTATTTTTACCA
TATGTTTGGGTCTTCAGGAGTATATTTTCTAACTCCCATTAGTATATTTT
TTCAGAGACACATCGATTTTAGATTCGTATTTATCTCGACTTCTATCCGG
CTAGTAGGTTAGATATGAATCGATTAGACAAGTTTGAGTACAATTTACTA
GTTCTCTTCTTAAATGTGAAAATGTTTACCGGTCCTTTAAATGTTATTTT
CAACAAATTTAACGACATTTTCATTTCGATACTTTTCTTTGATAGGTATG
TTGTGACAAATGTGAGCCAGAAATGTGGTACCATGGGGTTTGTCTTGGAA
TAAGAAGGAGCACCGAGCACCTGAAAAACGTCTCCTTTTATTGCAACAAA
GTAAGTACTCGGTACAACCAAAATATTCGTCTCTTTCAACTGATGAAAAT
CTATACCACGAGGTGAACTATTATGCTAAACTCTGTTCACGATAAGTGTG
AAAAAAGAACAAAAAAAACAACTTGGGGCCAATCAGCTGTAAACTTTGTT
TGATATTTTCTTATTGATTGAATACTTTCAGTAACGACGTTCTAAGATCA
AAGTTTCATTCCTGTGAAAATGATAGTTATAACTCTATAAGTTTTTCGAA
AATTAAAAAATAAACTTATTTATTCCACTCATCAACATCTTTCCAACGGT
ACCAAAGGTTATAGACAAAACAAAAAAAAACTGCACACTTATCGTGAACA
GACTTCTCGGGTAAATTAATGCGTGTCCAAATTTTCGTTAATTCTTCGGA
CCCATCATCACCCCTCCTAGCATAATAAATTATACCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTAATGCGCTTCTTTAAAGGTATAATTT
ATTATGCTAGGAGGGGTGACGATGGGTCCGAAGAATTAACGAAAATTTGG
ACACGCATTAATTTACCCGAGTTTAGACTTTGGCCTCTACCCTTTTTCGA
AAAATGTTTCTACCCCTGGTCAAAAGGACCTTTCATTATGGTCTACACTA
TAGATAGGGAACAAAATTTTCAAGGAATCAAACATTTTATCAAGGCTAGA
AAAAATATTTTATGATTTTTGATGAGTCAGCTGTTACTTTCAGAATCTTT
GGCCGGGCCATAGCTTTCATTAGCGAGTTTATGTATGTGTGTTTTTCAGC
GACGGAGACGGTAAGGTTCTAATTTGAGTAGATCCTGACCAGCTGAAGAC
GACGGTAAATCAGCAGTTTTACCGTCCTCGATTTTGCGGGGCAGAATTGC
GGGTTTTTCCAAATCGCATCAGTCACTCTACCGTCCTTAAAAGTGCAAAT
ACATAAACTCGGTAATAAGAGACAATGCCTCGAAGTCAATTTGTTATAGA
ATGGAGTGAAATCAATGAAACTTAACTTACTGCGAAAGTTTCTTCCCCTA
AAGTATTTAGAAAGGTTTAGAACTTAGCCTTAAAATAAGCAATATATGAC
ATTTCCTTGGATTGTATTGCTCTTTGTGTAATAAAAGACATAAGAAGACA
AAAATTCCATCAGATTAAAACTTGCCTTTTTCTTTATCTCTCTTATCAAG
TGTTCCTTTAATTGAATTTCATATTTTTCTAATTGTTCAGCCGGTGGTCC
AAGATGAAATCCTTGCTTTGGAAGTTGGCGAGACGTTGATCCGTCAACGA
AAAAACAGAAAAATTTCCAAATGCTACGGGTGTAGTGTACCAATCAAAAA
CGCGCCATTGGAAGCGCCATACGACATGGTACTTGTACAGAAGATGCTGG
GTCCGAGAAAGGGTGGTAAGATCACAGACGACCCCAGCACTTTTGTCAAC
TACGTCTGCAATTACCACCCGGATAGAAAATGCACAACAAAAATCAATAT
CGTTAATGATAAGATAAAGATCTCCAAAGACTTCAAAACCATCGAAGTCA
GTCATCAAGAAAAACTGGAGGATCTAGGTATTGACATTAGTGTGTTGAAT
TGATGATTTGTTTGTGGTTACATGGTTTCTGCCCCCCCCCCCCCCCTTCT
TAAAATAAGGGGACTCAAAAAATGCCTTTTTAAAATGGGGGGCTTTCTAT
CTTGGGTCTTCTAATATCCCTTATTAAGAGAGGATTCATTCATATCATTC
AAAAG

Coding sequence (CDS) from alignment at scaffold_511:504588..511592-

>TCONS_00069967 ID=TCONS_00069967|Name=TCONS_00069967|organism=Clytia hemisphaerica|type=CDS|length=3855bp|location=Sequence derived from alignment at scaffold_511:504588..511592- (Clytia hemisphaerica)
CCGGTGGTCCAAGATGAAATCCTTGCTTTGGAAGTTGGCGAGACGTTGAT
CCGTCAACGAAAAAACAGAAAAATTTCCAAATGCTACGGGTGTAGTGTAC
CAATCAAAAACGCGCCATTGGAAGCGCCATACGACATGGTACTTGTACAG
AAGATGCTGGGTCCGAGAAAGGGTGGTAAGATCACAGACGACCCCAGCAC
TTTTGTCAACTACGTCTGCAATTACCACCCGGATAGAAAATGCACAACAA
AAATCAATATCGTTAATGATAAGATAAAGATCTCCAAAGACTTCAAAACC
ATCGAAGTCAGTCATCAAGAAAAACTGGAGGATCTAGGTATTGACATTAG
TGTGTTGAATTGAGTATGTTGTGACAAATGTGAGCCAGAAATGTGGTACC
ATGGGGTTTGTCTTGGAATAAGAAGGAGCACCGAGCACCTGAAAAACGTC
TCCTTTTATTGCAACAAAGTGACGGTGATTGGTGCAGAAATATATGCCGC
TTATGTGATCGAACCTCACCACCACCATCAAAACGTGCAGGAACGAACCC
GAAGGAATGGGGATGGTTTGCAGAGTGTATCTTGAAGGGGGAAGATCTTC
CAGCCAACATTTCATCATGTGACATGAATGATTTTCGCCGCGAAATTGCT
ATCAACCTCATACAAATAGGCGATGACAAGACATTTCGAAGGTGTACAAA
CGTGGCAAATAAATTCAACCCAACACCCGAAACAAACTGATATGATATCA
TGTGGCGCGTTTTGCTTAAAGCCGGTGGTCCAAGATGAAATCCTTGCTTT
GGAAGTTGGCGAGACGTTGATCCGTCAACGAAAAAACAGAAAAATTTCCA
AATGCTACGGGTGTAGTGTACCAATCAAAAACGCGCCATTGGAAGCGCCA
TACGACATGGTACTTGTACAGAAGATGCTGGGTCCGAGAAAGGGTGGTAA
GATCACAGACGACCCCAGCACTTTTGTCAACTACGTCTGCAATTACCACC
CGGATAGAAAATGCACAACAAAAATCAATATCGTTAATGATAAGATAAAG
ATCTCCAAAGACTTCAAAACCATCGAAGTCAGTCATCAAGAAAAACTGGA
GGATCTAGGTATTGACATTAGTGTGTTGAATTGAGTATGTTGTGACAAAT
GTGAGCCAGAAATGTGGTACCATGGGGTTTGTCTTGGAATAAGAAGGAGC
ACCGAGCACCTGAAAAACGTCTCCTTTTATTGCAACAAAGTGACGGTGAT
TGGTGCAGAAATATATGCCGCTTATGTGATCGAACCTCACCACCACCATC
AAAACGTGCAGGAACGAACCCGAAGGAATGGGGATGGTTTGCAGAGTGTA
TCTTGAAGGGGGAAGATCTTCCAGCCAACATTTCATCATGTGACATGAAT
GATTTTCGCCGCGAAATTGCTATCAACCTCATACAAATAGGCGATGACAA
GACATTTCGAAGGTGTACAAACGTGGCAAATAAATTCAACCCAACACCCG
AAACAAACTGATATGATATCATGTGGCGCGTTTTGCTTAAAGCCGGTGGT
CCAAGATGAAATCCTTGCTTTGGAAGTTGGCGAGACGTTGATCCGTCAAC
GAAAAAACAGAAAAATTTCCAAATGCTACGGGTGTAGTGTACCAATCAAA
AACGCGCCATTGGAAGCGCCATACGACATGGTACTTGTACAGAAGATGCT
GGGTCCGAGAAAGGGTGGTAAGATCACAGACGACCCCAGCACTTTTGTCA
ACTACGTCTGCAATTACCACCCGGATAGAAAATGCACAACAAAAATCAAT
ATCGTTAATGATAAGATAAAGATCTCCAAAGACTTCAAAACCATCGAAGT
CAGTCATCAAGAAAAACTGGAGGATCTAGGTATTGACATTAGTGTGTTGA
ATTGAGTATGTTGTGACAAATGTGAGCCAGAAATGTGGTACCATGGGGTT
TGTCTTGGAATAAGAAGGAGCACCGAGCACCTGAAAAACGTCTCCTTTTA
TTGCAACAAAGTGACGGTGATTGGTGCAGAAATATATGCCGCTTATGTGA
TCGAACCTCACCACCACCATCAAAACGTGCAGGAACGAACCCGAAGGAAT
GGGGATGGTTTGCAGAGTGTATCTTGAAGGGGGAAGATCTTCCAGCCAAC
ATTTCATCATGTGACATGAATGATTTTCGCCGCGAAATTGCTATCAACCT
CATACAAATAGGCGATGACAAGACATTTCGAAGGTGTACAAACGTGGCAA
ATAAATTCAACCCAACACCCGAAACAAACTGATATGATATCATGTGGCGC
GTTTTGCTTAAAGCCGGTGGTCCAAGATGAAATCCTTGCTTTGGAAGTTG
GCGAGACGTTGATCCGTCAACGAAAAAACAGAAAAATTTCCAAATGCTAC
GGGTGTAGTGTACCAATCAAAAACGCGCCATTGGAAGCGCCATACGACAT
GGTACTTGTACAGAAGATGCTGGGTCCGAGAAAGGGTGGTAAGATCACAG
ACGACCCCAGCACTTTTGTCAACTACGTCTGCAATTACCACCCGGATAGA
AAATGCACAACAAAAATCAATATCGTTAATGATAAGATAAAGATCTCCAA
AGACTTCAAAACCATCGAAGTCAGTCATCAAGAAAAACTGGAGGATCTAG
GTATTGACATTAGTGTGTTGAATTGAGTATGTTGTGACAAATGTGAGCCA
GAAATGTGGTACCATGGGGTTTGTCTTGGAATAAGAAGGAGCACCGAGCA
CCTGAAAAACGTCTCCTTTTATTGCAACAAAGTGACGGTGATTGGTGCAG
AAATATATGCCGCTTATGTGATCGAACCTCACCACCACCATCAAAACGTG
CAGGAACGAACCCGAAGGAATGGGGATGGTTTGCAGAGTGTATCTTGAAG
GGGGAAGATCTTCCAGCCAACATTTCATCATGTGACATGAATGATTTTCG
CCGCGAAATTGCTATCAACCTCATACAAATAGGCGATGACAAGACATTTC
GAAGGTGTACAAACGTGGCAAATAAATTCAACCCAACACCCGAAACAAAC
TGATATGATATCATGTGGCGCGTTTTGCTTAAAGCCGGTGGTCCAAGATG
AAATCCTTGCTTTGGAAGTTGGCGAGACGTTGATCCGTCAACGAAAAAAC
AGAAAAATTTCCAAATGCTACGGGTGTAGTGTACCAATCAAAAACGCGCC
ATTGGAAGCGCCATACGACATGGTACTTGTACAGAAGATGCTGGGTCCGA
GAAAGGGTGGTAAGATCACAGACGACCCCAGCACTTTTGTCAACTACGTC
TGCAATTACCACCCGGATAGAAAATGCACAACAAAAATCAATATCGTTAA
TGATAAGATAAAGATCTCCAAAGACTTCAAAACCATCGAAGTCAGTCATC
AAGAAAAACTGGAGGATCTAGGTATTGACATTAGTGTGTTGAATTGAGTA
TGTTGTGACAAATGTGAGCCAGAAATGTGGTACCATGGGGTTTGTCTTGG
AATAAGAAGGAGCACCGAGCACCTGAAAAACGTCTCCTTTTATTGCAACA
AAGTGACGGTGATTGGTGCAGAAATATATGCCGCTTATGTGATCGAACCT
CACCACCACCATCAAAACGTGCAGGAACGAACCCGAAGGAATGGGGATGG
TTTGCAGAGTGTATCTTGAAGGGGGAAGATCTTCCAGCCAACATTTCATC
ATGTGACATGAATGATTTTCGCCGCGAAATTGCTATCAACCTCATACAAA
TAGGCGATGACAAGACATTTCGAAGGTGTACAAACGTGGCAAATAAATTC
AACCCAACACCCGAAACAAACTGATATGATATCATGTGGCGCGTTTTGCT
TAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043551XLOC_043551Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069967-exon-scaffold_511-1575043694:511564..511592TCONS_00069967-exon-scaffold_511-1575043694:511564..511592Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1575043694:510973..511124TCONS_00069967-exon-scaffold_511-1575043694:510973..511124Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1575043694:510130..510213TCONS_00069967-exon-scaffold_511-1575043694:510130..510213Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1575043694:509315..509853TCONS_00069967-exon-scaffold_511-1575043694:509315..509853Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1575043694:508631..508736TCONS_00069967-exon-scaffold_511-1575043694:508631..508736Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1575043694:508334..508439TCONS_00069967-exon-scaffold_511-1575043694:508334..508439Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1575043694:507329..507426TCONS_00069967-exon-scaffold_511-1575043694:507329..507426Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1575043694:506843..506947TCONS_00069967-exon-scaffold_511-1575043694:506843..506947Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1575043694:504588..505102TCONS_00069967-exon-scaffold_511-1575043694:504588..505102Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:511564..511592TCONS_00069967-exon-scaffold_511-1510915933:511564..511592Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:510973..511124TCONS_00069967-exon-scaffold_511-1510915933:510973..511124Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:510130..510213TCONS_00069967-exon-scaffold_511-1510915933:510130..510213Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:509315..509853TCONS_00069967-exon-scaffold_511-1510915933:509315..509853Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:508631..508736TCONS_00069967-exon-scaffold_511-1510915933:508631..508736Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:508334..508439TCONS_00069967-exon-scaffold_511-1510915933:508334..508439Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:507329..507426TCONS_00069967-exon-scaffold_511-1510915933:507329..507426Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:506843..506947TCONS_00069967-exon-scaffold_511-1510915933:506843..506947Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1510915933:504588..505102TCONS_00069967-exon-scaffold_511-1510915933:504588..505102Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:511564..511592TCONS_00069967-exon-scaffold_511-1491911889:511564..511592Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:510973..511124TCONS_00069967-exon-scaffold_511-1491911889:510973..511124Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:510130..510213TCONS_00069967-exon-scaffold_511-1491911889:510130..510213Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:509315..509853TCONS_00069967-exon-scaffold_511-1491911889:509315..509853Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:508631..508736TCONS_00069967-exon-scaffold_511-1491911889:508631..508736Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:508334..508439TCONS_00069967-exon-scaffold_511-1491911889:508334..508439Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:507329..507426TCONS_00069967-exon-scaffold_511-1491911889:507329..507426Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:506843..506947TCONS_00069967-exon-scaffold_511-1491911889:506843..506947Clytia hemisphaericaexon
TCONS_00069967-exon-scaffold_511-1491911889:504588..505102TCONS_00069967-exon-scaffold_511-1491911889:504588..505102Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069967-proteinTCONS_00069967-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:504588..511592 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22139	0.161918	0.0626673	0.231933	0.298557	0.294904	0.213474	0	0	0.462172	0.112149	0.258028	0.441719	0.305819	0.671551	0.41699	0.146948	0.359567	0.411849	0.402435	0.481618	0.313222	0.253841	0.173084	0	0	0.531247	0.242983	0.354332	0.938833
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR003653Peptidase_C48_C
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069967 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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