TCONS_00069989 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069989
Unique NameTCONS_00069989
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069989 ID=TCONS_00069989|Name=TCONS_00069989|organism=Clytia hemisphaerica|type=transcript|length=179bp
CTCGTAAAATGTATCTTTCAtcagtttaaaaatatttcaaaatatgtaCA
ATTTTTCACGCATATTTACAATTCGATAAAATATTAAAACTTCTTGTAGC
AAACCTTATTACCAAAATATATCAACAATCTTACGTATTTAACATATAAa
ccataaaaataatttttgtcaaaaactcA
Run BLAST on NCBI

transcript from alignment at scaffold_511:253628..253806

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069989 ID=TCONS_00069989|Name=TCONS_00069989|organism=Clytia hemisphaerica|type=transcript|length=179bp|location=Sequence derived from alignment at scaffold_511:253628..253806 (Clytia hemisphaerica)
TgagtttttgacaaaaattatttttatggtTTATATGTTAAATACGTAAG
ATTGTTGATATATTTTGGTAATAAGGTTTGCTACAAGAAGTTTTAATATT
TTATCGAATTGTAAATATGCGTGAAAAATTGtacatattttgaaatattt
ttaaactgaTGAAAGATACATTTTACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043568XLOC_043568Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069989-exon-scaffold_511-1491911889:253628..253806TCONS_00069989-exon-scaffold_511-1491911889:253628..253806Clytia hemisphaericaexon
TCONS_00069989-exon-scaffold_511-1510915933:253628..253806TCONS_00069989-exon-scaffold_511-1510915933:253628..253806Clytia hemisphaericaexon
TCONS_00069989-exon-scaffold_511-1575043694:253628..253806TCONS_00069989-exon-scaffold_511-1575043694:253628..253806Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:253628..253806 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069989 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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