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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070137 ID=TCONS_00070137|Name=TCONS_00070137|organism=Clytia hemisphaerica|type=transcript|length=2885bp
caagctgcgacaaaaaagactccggagcataccctgcaagtgcatgtttt
gcaggggtgtcgcaccgcccctgatgtcacccacaaattttgacaaaatg
atattgaatgacaaaaatattgtcaaaatcatgaaatataaggcctccga
accaatttacagcaaaatgttttttcatactcaataggatgctcatcatg
tgactggatatagattgacatgttttaaacgattaaatgctgcaagatag
tgattttagagatatgagtataattgcgtcatttttattaaaaattcata
atggcaggtggaaaatattgacacatttataaaataccatcatttctacg
ttattatcccattaaaattatattcatactcaaggtgatggaggggatat
aatgagatatgatttaacaatagctgtactatcattttcttgagaaagct
CGGTTTTCAGGTGATggaaattgtaatatgtatattacttacGTATAATA
TATAAAATGCATATAGCACTAAAAGTGTATTATTGATCATATAAGCTTat
tatatgtatgtaatatgttgCGGTGTTTTCTGGTCTGTGTTGTGCACGAC
GCAAACTTCCAAAGCACGTGGAAAGCACGTGGTTAGATTTTGACGTTTTA
AATAGTCATACGTGGATAAAACACCTTcaagttgatttttttgataattt
ttagcgttttttaaacattttctgtttgaattactttgatcaGAGCTGCC
CCGTCACCTCGTAACCCGTAACCCGTGCCCCGTGCCCCGgacccgtgccc
cgtgacccggacccgtgacccgtgtttccaACTAGCCAAAGTAACAACTT
TAAGGAGAATGTAAAAAACTTTGTAGTTAAAGAGGAAGCTTATACGTTCA
TGAATTCTGTCAAAGGTTCTGCAGCTTATTGGAAAAATATGCTATCTGAC
GTGTTGGCCATGGTGAAACAAGTTGGTATTCCTTTGTTTTTCATGACTTT
ATCTTGTGCTGATTTAAGATTGAATGAATTGCCTTTCATAATTTCTAAAC
TTAAAGGTCAAGAAATATCATACGCGGAAATAGACGCAATGCCATATTTT
GAAAGATGCGAACATTTGATATGAAGAAGCTCTGTCGATTTCAACAGATG
AAAATGACTTGCAAGTTCATCTTAAGAGAGATACCAATTATGAACTTCAT
AAAAAAATAGACTTTGCAAAACTTATAAACGACAATCAGCCTAATTGATG
ACAGTGTTGTTGAAGAAAACCATGCTGAAAACCCGCTTCCTAAGAAAATT
CCCCTAATGAATTCTAAAGAATGTATGAGATGTCGAAAAGTGCGAAAAGT
TCTTCGGACATACACTCCAAATCATCATTTATACCCAGAAAAGTATGCTC
GTCGccttttgatgttgttttatCCCTTTCGTAAAGATGGCTCATATGTG
CTAAATTTATCCAACCCTGATGTTTTAGAAAAAGTCAATAGAAACAGAGA
AATCTTTGAGTTGGTTGAAATGGCCTTACAAAACTATAGAAGTGATCTAT
TGACAAATTAGAACTATTTCGCCCAACAGGAAGACGAAGAAGTTCTCAAT
CTATTAAATGAGGAATTAGATAATACGAATGTTGAAGAGGAACCACACAT
TGAAGAATGAAGCTTTATTAAATTTAGCTCCTGCTGCCGTTCATAATACA
TCACTTTCAGAGGAAGAACTGAGATTGAATATTGAGTCTTTCAATGGAAA
GCAAGCATGTTGTCTACATGTCAATTAAACGATATATAAAGAATAAGAAC
TTAGAATCACCAGAACAACTTGAACCACTTCGTATCTTTTTAACTGCTGC
TGGTGGGTGTGGGAAAAGCTATCTCCTCAAATGTCGTTATGATGTTTTAA
ACAAGTTTCTTTGCCGTAAAGGCGACACATCTAAAGCTAAAATAATGCGA
TTGGCACCAACCGGTGTTGCTGCAATTAACATTGATGGTAATACCATACA
TACTGGTCTAGGTTTACCTCGGCTTTCTACCACTAAGTGATAAACAAAGA
ACTAACTTCCGTCTCAAACTTAAGGAAGTCAGTATTATTTTCATAGATGA
AATCTCAATGGTTAACCCACAGACTTTGTTATAAATTCACCAACGACTGT
GTGAGATATTTGGGATATCTGACCGTATACCATTTGCCAATAAGACAGTA
ATTGTTAGTGGTGATCTATATCAGCTACCTCCTGTTTTTGGCGGCCCAGT
GTTTAAGTTGAATGGCTTTTTGATAAATTCATTGAAGCTTTGGCGTCAAT
TTAAATTTGCTGAGATTGATGAGGTTATGCGTCAACATGGTGACAATACA
TTTGTAAACTTGCTGAACAACATTAGAATAGGAATCGTTCTTTTAGCTTG
CATGGTTGTGTATCAGCAGCAGTTTTCATGTCTTGTAAAATCCTTCAACT
TGAAATCTGTAAGCCCTAACATTTCCCTACTGCATATTTTACATATCATT
GACCTACATTATTATTTACACTGTTTACAAAAAAAGAGATTTACAATCTA
ATCTTGGATCTTGGATATCAAGGAGCTTAAGAATTCATGCTGGTGTTGTT
CGTTGGGAAAAATTCGTGAAATCAACTTATCCTAATCCGTTCATGACTAT
ATCGTCCTCTTGTATGCCCACCCTGCCGCCCTGAATTATGTATGTCTGGT
TGATTTATTGTCTTTGCTGTTCAATTGCCTTCATGTCAAAAATTAAATGT
TTCATTGGACATATTTCTCAAATACgttatgaaaataattattgagGTAG
AAAAATTGTATATACGAAAAATTTATAACTTCCAATTTGAATTATTTCTA
TAAAAATAGAAAGCTTTATACTTTATAAATGCACC Run BLAST on NCBI transcript from alignment at scaffold_513:257997..260881 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070137 ID=TCONS_00070137|Name=TCONS_00070137|organism=Clytia hemisphaerica|type=transcript|length=2885bp|location=Sequence derived from alignment at scaffold_513:257997..260881 (Clytia hemisphaerica)
GGTGCATTTATAAAGTATAAAGCTTTCTATTTTTATAGAAATAATTCAAA
TTGGAAGTTATAAATTTTTCGTATATACAATTTTTCTACctcaataatta
ttttcataacGTATTTGAGAAATATGTCCAATGAAACATTTAATTTTTGA
CATGAAGGCAATTGAACAGCAAAGACAATAAATCAACCAGACATACATAA
TTCAGGGCGGCAGGGTGGGCATACAAGAGGACGATATAGTCATGAACGGA
TTAGGATAAGTTGATTTCACGAATTTTTCCCAACGAACAACACCAGCATG
AATTCTTAAGCTCCTTGATATCCAAGATCCAAGATTAGATTGTAAATCTC
TTTTTTTGTAAACAGTGTAAATAATAATGTAGGTCAATGATATGTAAAAT
ATGCAGTAGGGAAATGTTAGGGCTTACAGATTTCAAGTTGAAGGATTTTA
CAAGACATGAAAACTGCTGCTGATACACAACCATGCAAGCTAAAAGAACG
ATTCCTATTCTAATGTTGTTCAGCAAGTTTACAAATGTATTGTCACCATG
TTGACGCATAACCTCATCAATCTCAGCAAATTTAAATTGACGCCAAAGCT
TCAATGAATTTATCAAAAAGCCATTCAACTTAAACACTGGGCCGCCAAAA
ACAGGAGGTAGCTGATATAGATCACCACTAACAATTACTGTCTTATTGGC
AAATGGTATACGGTCAGATATCCCAAATATCTCACACAGTCGTTGGTGAA
TTTATAACAAAGTCTGTGGGTTAACCATTGAGATTTCATCTATGAAAATA
ATACTGACTTCCTTAAGTTTGAGACGGAAGTTAGTTCTTTGTTTATCACT
TAGTGGTAGAAAGCCGAGGTAAACCTAGACCAGTATGTATGGTATTACCA
TCAATGTTAATTGCAGCAACACCGGTTGGTGCCAATCGCATTATTTTAGC
TTTAGATGTGTCGCCTTTACGGCAAAGAAACTTGTTTAAAACATCATAAC
GACATTTGAGGAGATAGCTTTTCCCACACCCACCAGCAGCAGTTAAAAAG
ATACGAAGTGGTTCAAGTTGTTCTGGTGATTCTAAGTTCTTATTCTTTAT
ATATCGTTTAATTGACATGTAGACAACATGCTTGCTTTCCATTGAAAGAC
TCAATATTCAATCTCAGTTCTTCCTCTGAAAGTGATGTATTATGAACGGC
AGCAGGAGCTAAATTTAATAAAGCTTCATTCTTCAATGTGTGGTTCCTCT
TCAACATTCGTATTATCTAATTCCTCATTTAATAGATTGAGAACTTCTTC
GTCTTCCTGTTGGGCGAAATAGTTCTAATTTGTCAATAGATCACTTCTAT
AGTTTTGTAAGGCCATTTCAACCAACTCAAAGATTTCTCTGTTTCTATTG
ACTTTTTCTAAAACATCAGGGTTGGATAAATTTAGCACATATGAGCCATC
TTTACGAAAGGGataaaacaacatcaaaaggCGACGAGCATACTTTTCTG
GGTATAAATGATGATTTGGAGTGTATGTCCGAAGAACTTTTCGCACTTTT
CGACATCTCATACATTCTTTAGAATTCATTAGGGGAATTTTCTTAGGAAG
CGGGTTTTCAGCATGGTTTTCTTCAACAACACTGTCATCAATTAGGCTGA
TTGTCGTTTATAAGTTTTGCAAAGTCTATTTTTTTATGAAGTTCATAATT
GGTATCTCTCTTAAGATGAACTTGCAAGTCATTTTCATCTGTTGAAATCG
ACAGAGCTTCTTCATATCAAATGTTCGCATCTTTCAAAATATGGCATTGC
GTCTATTTCCGCGTATGATATTTCTTGACCTTTAAGTTTAGAAATTATGA
AAGGCAATTCATTCAATCTTAAATCAGCACAAGATAAAGTCATGAAAAAC
AAAGGAATACCAACTTGTTTCACCATGGCCAACACGTCAGATAGCATATT
TTTCCAATAAGCTGCAGAACCTTTGACAGAATTCATGAACGTATAAGCTT
CCTCTTTAACTACAAAGTTTTTTACATTCTCCTTAAAGTTGTTACTTTGG
CTAGTtggaaacacgggtcacgggtccgggtcacggggcacgggtcCGGG
GCACGGGGCACGGGTTACGGGTTACGAGGTGACGGGGCAGCTCtgatcaa
agtaattcaaacagaaaatgtttaaaaaacgctaaaaattatcaaaaaaa
tcaacttgAAGGTGTTTTATCCACGTATGACTATTTAAAACGTCAAAATC
TAACCACGTGCTTTCCACGTGCTTTGGAAGTTTGCGTCGTGCACAACACA
GACCAGAAAACACCGcaacatattacatacatataatAAGCTTATATGAT
CAATAATACACTTTTAGTGCTATATGCATTTTATATATTATACgtaagta
atatacatattacaatttccATCACCTGAAAACCGagctttctcaagaaa
atgatagtacagctattgttaaatcatatctcattatatcccctccatca
ccttgagtatgaatataattttaatgggataataacgtagaaatgatggt
attttataaatgtgtcaatattttccacctgccattatgaatttttaata
aaaatgacgcaattatactcatatctctaaaatcactatcttgcagcatt
taatcgtttaaaacatgtcaatctatatccagtcacatgatgagcatcct
attgagtatgaaaaaacattttgctgtaaattggttcggaggccttatat
ttcatgattttgacaatatttttgtcattcaatatcattttgtcaaaatt
tgtgggtgacatcaggggcggtgcgacacccctgcaaaacatgcacttgc
agggtatgctccggagtcttttttgtcgcagcttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070137-exon-scaffold_513-1491911889:257997..260881 | TCONS_00070137-exon-scaffold_513-1491911889:257997..260881 | Clytia hemisphaerica | exon |
| TCONS_00070137-exon-scaffold_513-1510915933:257997..260881 | TCONS_00070137-exon-scaffold_513-1510915933:257997..260881 | Clytia hemisphaerica | exon |
| TCONS_00070137-exon-scaffold_513-1575043694:257997..260881 | TCONS_00070137-exon-scaffold_513-1575043694:257997..260881 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_513 | supercontig | scaffold_513:257997..260881 . |
Blast
The following BLAST results are available for this feature:
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