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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070663 ID=TCONS_00070663|Name=TCONS_00070663|organism=Clytia hemisphaerica|type=transcript|length=1607bp
CAGAATTTCATATAGGTTTTGTACTTAAAGCTTGACAAAAATCTGCGAGG
ATAACATTTTGAAAACTCGTGCAATGTTCActtaattttaccaaaataat
ggtCTTCAAAGTTATAGCCCTGAAAGTATCCATggaagaaaaatcaaaat
gacaTCAACGAAAAACAAAGCATTACGAGACGTACCACACCAGTGGTGGA
AAATCAGTCTTTTCAATCTCATCCAGCTCAAACTGAACGGATGGGATTTC
TTCCAACAACAAATAGAAAAACACCAGAGTACTGTATTCTGTGCCAAAAT
ATTCAACGATTGGACAACGTTTGTGTGTGACCATGTAGCTGTTGCTGCTG
TATTGGACATGACCAAAACGGAGAGAAGCAAAACCGGCCATGGTTTCTTG
GAGCTACGTCCAGAAATGATGTTAGGTCAAACGCCTTGTGTGTTCAGTGT
TGGCGAAGGTCATCAAATACATAAACCTTTTATCATGAATTTCGTTGCTA
AGAGTTACGAGAAACAAAAACCCAACATGGTAGCCATAATTGAGAAAGAA
TTCAAGGTACTCAGTAAACATGGTATTGGTGGTGCTTCATCTGTGGATTG
GGAAGGAATGTTTTCGACTGCAGCTAAACGAGTTATTTGTCACATGTTGT
TGGGTGTCCACATTGAAGACATTACACCTCTCGAGAAATATACACAAGGT
ATGTTAACTATGGAAAAAATGCCTGGGGAAGCCGACACCTTGATCGAAAA
CATCATGACGATCTTCAACAAAGTGGATTCAATAAAAAATCTATCTATCC
AATTCTCAAACAGCGGGTTGACCCAAGAAGAAATGTTCAAAGACATCTGC
TATGTAGTATGTCTGGATGCCAGCAACGCTATTACAATCTTCGTTCTCAA
TTCATTGTATTGCTACCTGAGATTATCCAGCAATGACAAGCAACTGCTGA
GAACAGAAGCTGATCAATATTTCAAGGATCCAGAACAAACCAATCTATCA
GCATTACCAAATCTCCATAAATTCTTCACTGAAATGCTACGTTGGTCATC
TAAAGCTTTCATTTATGGTAAAGCGAAATCCGATTTCCAGCTCGATTCAA
CATCGGGGAAATTCCGGATTAACAAAGGAGACTTGTTATGCGCGCTACCT
TACTTCATACACCGGGATGATCAACTTTTCGAGAATCCCGAGCAATTTGA
TATGCACCGAAACCCGGAAGAGTCCGAAAAATACAACTTCACCTACGGTG
GTCGTTTTCTCGGACAATCTACACCGAGCAACCATAGATGTGCTGGATTC
TCTCTTTCCAGAGATGTTGTCAAAACGTTTATTCTCTTTTTCACTCGTTG
CCAATTCGAACAGATCGGGGTGACCGAATGGACTGGAGGAAAAATTTCAC
GAAAATATGCAAGTGATGAGCCGCTCAAATTATCCTctttcaaatttgaa
taaaaacagaCATTTAATAAAAGGTAGCAATTCTCATGGAAGTTGTTCTC
AAAGATTGAAATACTTGAACGAAAACAACTTAGTTAACAAATAGAGAATC
AagtgaacttgaaatttttctaatgaTATTAATATAAAGATAAATGAAAG
CAACAAC Run BLAST on NCBI protein sequence of TCONS_00070663-protein >TCONS_00070663-protein ID=TCONS_00070663-protein|Name=TCONS_00070663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
MTSTKNKALRDVPHQWWKISLFNLIQLKLNGWDFFQQQIEKHQSTVFCAK
IFNDWTTFVCDHVAVAAVLDMTKTERSKTGHGFLELRPEMMLGQTPCVFS
VGEGHQIHKPFIMNFVAKSYEKQKPNMVAIIEKEFKVLSKHGIGGASSVD
WEGMFSTAAKRVICHMLLGVHIEDITPLEKYTQGMLTMEKMPGEADTLIE
NIMTIFNKVDSIKNLSIQFSNSGLTQEEMFKDICYVVCLDASNAITIFVL
NSLYCYLRLSSNDKQLLRTEADQYFKDPEQTNLSALPNLHKFFTEMLRWS
SKAFIYGKAKSDFQLDSTSGKFRINKGDLLCALPYFIHRDDQLFENPEQF
DMHRNPEESEKYNFTYGGRFLGQSTPSNHRCAGFSLSRDVVKTFILFFTR
CQFEQIGVTEWTGGKISRKYASDEPLKLSSFKFE Run BLAST on NCBI transcript from alignment at scaffold_57:242944..245912- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070663 ID=TCONS_00070663|Name=TCONS_00070663|organism=Clytia hemisphaerica|type=transcript|length=2969bp|location=Sequence derived from alignment at scaffold_57:242944..245912- (Clytia hemisphaerica)
CAGAATTTCATATAGGTTTTGTACTTAAAGCTTGACAAAAATCTGCGAGG
ATAACATTTTGAAAACTCGTGCAATGTTCACTTAATTTTACCAAAATAAT
GGTCTTCAAAGTTATAGCCCTGAAAGTATCCATGTAAGTATAGGTATGTA
ATCATTTTATGTACTCGAATTTTCTCGACTTTTATCGTTTTACTTTGATA
TTAACTAGAATTTAATGTATCAAAATCAAGAAATTTCACAAATTCATTGA
AAGTTAAAGAGTGTTTTTTCATCATGTTGACGCAAATGAAGTTTAACTGA
GCTCCATGATGGATTACCTCTTTTCTTTTCTTCGATTTTCACCAGAATTT
CACATTGAAATCATGAAATTTCACAAATTCATTAAAAGTTAAAGAGTGTT
TTTTCATCATGTTGATGCAAATGAAGAGGAGAGGAGTGAGAGGAGAGTGA
GAGGAGTTTATTGGCTTCCAGGTTAAACTTGTTCTGTTTGGGGGTAATTT
TGCTCTGTCTATCTAAGGGTAATTTTGATTGTCCATGAGGTCAACTAATG
CTTGTCCGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATTTCCAAAAAATGTTATATCTTCCATCCCCCCCATATAAAAG
CCCATTACCGTTAGGACACTTGGCAATCTTTCTTGGTTTTAATAAAGTTT
TACAGAGAATTCCCCTTTTTGTCTCGAATATTACGGCCATGAGATACACT
TGATTGTAGTTTACGAGGTTAGGTAGGAAATCCTACATAGGTCACGTGAC
ATTACAATAGACTTTGAGCGCTTGACCAATAAGAAGCTTCGCGAAAACAA
TAGCACCAATATTTTTTGCGACGTTGACTTTTTTTGCTTGGAAGAGCTTA
AAGCACTACATCTAGCTCTTCGGGCTTTACAGAATAATTTGTGACTATAG
CATTTTGAAAATTTTTTCTAGGGAAGAAAAATCAAAATGACATCAACGAA
AAACAAAGCATTACGAGACGTACCACACCAGTGGTGGAAAATCAGTCTTT
TCAATCTCATCCAGCTCAAACTGAACGGATGGGATTTCTTCCAACAACAA
ATAGAAAAACACCAGAGTACTGTATTCTGTGCCAAAATATTCAACGATTG
GACAACGTTTGTGTGTGACCATGTAGCTGTTGCTGCTGTATTGGACATGA
CCAAAACGGAGAGAAGCAAAACCGGCCATGGTTTCTTGGAGCTACGTCCA
GAAATGATGTTAGGTCAAACGCCTTGTGTGTTCAGTGTTGGCGAAGGTCA
TCAAATACATAAACCTTTTATCATGAATTTCGTTGCTAAGAGTTACGAGA
AACAAAAACCCAACATGGTAGCCATAATTGAGAAAGAATTCAAGGTACTC
AGTAAACATGGTATTGGTGGTGCTTCATCTGTGGATTGGGAAGGAATGTT
TTCGACTGCAGCTAAACGAGTTATTTGTCACATGTTGTTGGGTGTCCACA
TTGAAGACATTACACCTCTCGAGAAATATACACAAGGTAAGTTCAAAAGA
GCACGCACAATGCATTGTTTTGCCACCAAACATCTATAGTTATATAGTAA
CTGAGCTTGCACACAACGTTATTTCAACATTCATCTAACGTTATATGGAC
GTTGTGAACATTAGATAAAGGTTGAAAGTCAGGAAGAAAAGACACTTTTT
TATTCTGCTACTGGCAGTTTCATGCCACTTTGGTGACAATCTTCAGGCAA
CTCAAATAAATAAAATAAAGGTCAAAAGAACGTTGCGTGCCAGCTGGGCA
ACTTCAGGTACTTGGTGAGACCCCAACGAGTTGGCTTCAAACCAGCCAAC
TTGATCATTGATAAAATTGTAAGCTTGTATGTTGATTCTGACCAATGGGA
AGGTAGATACTGGCTTCAATCAGTAATTAAAAGCATTTTCATCTCTCTCT
TTTACAAAAGGTATGTTAACTATGGAAAAAATGCCTGGGGAAGCCGACAC
CTTGATCGAAAACATCATGACGATCTTCAACAAAGTGGATTCAATAAAAA
ATCTATCTATCCAATTCTCAAACAGCGGGTTGACCCAAGAAGAAATGTTC
AAAGACATCTGCTATGTAGTATGTCTGGATGCCAGCAACGCTATTACAAT
CTTCGTTCTCAATTCATTGTATTGCTACCTGAGATTATCCAGCAATGACA
AGCAACTGCTGAGAACAGAAGCTGATCAATATTTCAAGGATCCAGAACAA
ACCAATCTATCAGCATTACCAAATCTCCATAAATTCTTCACTGAAATGCT
ACGTTGGTCATCTAAAGCTTTCATTTATGGTAAAGCGAAATCCGATTTCC
AGCTCGATTCAACATCGGGGAAATTCCGGATTAACAAAGGAGACTTGTTA
TGCGCGCTACCTTACTTCATACACCGGGATGATCAACTTTTCGAGAATCC
CGAGCAATTTGATATGCACCGAAACCCGGAAGAGTCCGAAAAATACAACT
TCACCTACGGTGGTCGTTTTCTCGGACAATCTACACCGAGCAACCATAGA
TGTGCTGGATTCTCTCTTTCCAGAGATGTTGTCAAAACGTTTATTCTCTT
TTTCACTCGTTGCCAATTCGAACAGATCGGGGTGACCGAATGGACTGGAG
GAAAAATTTCACGAAAATATGCAAGTGATGAGCCGCTCAAATTATCCTCT
TTCAAATTTGAATAAAAACAGACATTTAATAAAAGGTAGCAATTCTCATG
GAAGTTGTTCTCAAAGATTGAAATACTTGAACGAAAACAACTTAGTTAAC
AAATAGAGAATCAAGTGAACTTGAAATTTTTCTAATGATATTAATATAAA
GATAAATGAAAGCAACAAC Coding sequence (CDS) from alignment at scaffold_57:242944..245912- >TCONS_00070663 ID=TCONS_00070663|Name=TCONS_00070663|organism=Clytia hemisphaerica|type=CDS|length=2610bp|location=Sequence derived from alignment at scaffold_57:242944..245912- (Clytia hemisphaerica)
GTATGTTAACTATGGAAAAAATGCCTGGGGAAGCCGACACCTTGATCGAA
AACATCATGACGATCTTCAACAAAGTGGATTCAATAAAAAATCTATCTAT
CCAATTCTCAAACAGCGGGTTGACCCAAGAAGAAATGTTCAAAGACATCT
GCTATGTAGTATGTCTGGATGCCAGCAACGCTATTACAATCTTCGTTCTC
AATTCATTGTATTGCTACCTGAGATTATCCAGCAATGACAAGCAACTGCT
GAGAACAGAAGCTGATCAATATTTCAAGGATCCAGAACAAACCAATCTAT
CAGCATTACCAAATCTCCATAAATTCTTCACTGAAATGCTACGTTGGTCA
TCTAAAGCTTTCATTTATGGTAAAGCGAAATCCGATTTCCAGCTCGATTC
AACATCGGGGAAATTCCGGATTAACAAAGGAGACTTGTTATGCGCGCTAC
CTTACTTCATACACCGGGATGATCAACTTTTCGAGAATCCCGAGCAATTT
GATATGCACCGAAACCCGGAAGAGTCCGAAAAATACAACTTCACCTACGG
TGGTCGTTTTCTCGGACAATCTACACCGAGCAACCATAGATGTGCTGGAT
TCTCTCTTTCCAGAGATGTTGTCAAAACGTTTATTCTCTTTTTCACTCGT
TGCCAATTCGAACAGATCGGGGTGACCGAATGGACTGGAGGAAAAATTTC
ACGAAAATATGCAAGTGATGAGCCGCTCAAATTATCCTCTTTCAAATTTG
AATAAATGACATCAACGAAAAACAAAGCATTACGAGACGTACCACACCAG
TGGTGGAAAATCAGTCTTTTCAATCTCATCCAGCTCAAACTGAACGGATG
GGATTTCTTCCAACAACAAATAGAAAAACACCAGAGTACTGTATTCTGTG
CCAAAATATTCAACGATTGGACAACGTTTGTGTGTGACCATGTAGCTGTT
GCTGCTGTATTGGACATGACCAAAACGGAGAGAAGCAAAACCGGCCATGG
TTTCTTGGAGCTACGTCCAGAAATGATGTTAGGTCAAACGCCTTGTGTGT
TCAGTGTTGGCGAAGGTCATCAAATACATAAACCTTTTATCATGAATTTC
GTTGCTAAGAGTTACGAGAAACAAAAACCCAACATGGTAGCCATAATTGA
GAAAGAATTCAAGGTACTCAGTAAACATGGTATTGGTGGTGCTTCATCTG
TGGATTGGGAAGGAATGTTTTCGACTGCAGCTAAACGAGTTATTTGTCAC
ATGTTGTTGGGTGTCCACATTGAAGACATTACACCTCTCGAGAAATATAC
ACAAGGTATGTTAACTATGGAAAAAATGCCTGGGGAAGCCGACACCTTGA
TCGAAAACATCATGACGATCTTCAACAAAGTGGATTCAATAAAAAATCTA
TCTATCCAATTCTCAAACAGCGGGTTGACCCAAGAAGAAATGTTCAAAGA
CATCTGCTATGTAGTATGTCTGGATGCCAGCAACGCTATTACAATCTTCG
TTCTCAATTCATTGTATTGCTACCTGAGATTATCCAGCAATGACAAGCAA
CTGCTGAGAACAGAAGCTGATCAATATTTCAAGGATCCAGAACAAACCAA
TCTATCAGCATTACCAAATCTCCATAAATTCTTCACTGAAATGCTACGTT
GGTCATCTAAAGCTTTCATTTATGGTAAAGCGAAATCCGATTTCCAGCTC
GATTCAACATCGGGGAAATTCCGGATTAACAAAGGAGACTTGTTATGCGC
GCTACCTTACTTCATACACCGGGATGATCAACTTTTCGAGAATCCCGAGC
AATTTGATATGCACCGAAACCCGGAAGAGTCCGAAAAATACAACTTCACC
TACGGTGGTCGTTTTCTCGGACAATCTACACCGAGCAACCATAGATGTGC
TGGATTCTCTCTTTCCAGAGATGTTGTCAAAACGTTTATTCTCTTTTTCA
CTCGTTGCCAATTCGAACAGATCGGGGTGACCGAATGGACTGGAGGAAAA
ATTTCACGAAAATATGCAAGTGATGAGCCGCTCAAATTATCCTCTTTCAA
ATTTGAATAAATGACATCAACGAAAAACAAAGCATTACGAGACGTACCAC
ACCAGTGGTGGAAAATCAGTCTTTTCAATCTCATCCAGCTCAAACTGAAC
GGATGGGATTTCTTCCAACAACAAATAGAAAAACACCAGAGTACTGTATT
CTGTGCCAAAATATTCAACGATTGGACAACGTTTGTGTGTGACCATGTAG
CTGTTGCTGCTGTATTGGACATGACCAAAACGGAGAGAAGCAAAACCGGC
CATGGTTTCTTGGAGCTACGTCCAGAAATGATGTTAGGTCAAACGCCTTG
TGTGTTCAGTGTTGGCGAAGGTCATCAAATACATAAACCTTTTATCATGA
ATTTCGTTGCTAAGAGTTACGAGAAACAAAAACCCAACATGGTAGCCATA
ATTGAGAAAGAATTCAAGGTACTCAGTAAACATGGTATTGGTGGTGCTTC
ATCTGTGGATTGGGAAGGAATGTTTTCGACTGCAGCTAAACGAGTTATTT
GTCACATGTTGTTGGGTGTCCACATTGAAGACATTACACCTCTCGAGAAA
TATACACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070663-exon-scaffold_57-1575043694:245780..245912 | TCONS_00070663-exon-scaffold_57-1575043694:245780..245912 | Clytia hemisphaerica | exon |
| TCONS_00070663-exon-scaffold_57-1575043694:244277..244841 | TCONS_00070663-exon-scaffold_57-1575043694:244277..244841 | Clytia hemisphaerica | exon |
| TCONS_00070663-exon-scaffold_57-1575043694:242944..243852 | TCONS_00070663-exon-scaffold_57-1575043694:242944..243852 | Clytia hemisphaerica | exon |
| TCONS_00070663-exon-scaffold_57-1510915933:245780..245912 | TCONS_00070663-exon-scaffold_57-1510915933:245780..245912 | Clytia hemisphaerica | exon |
| TCONS_00070663-exon-scaffold_57-1510915933:244277..244841 | TCONS_00070663-exon-scaffold_57-1510915933:244277..244841 | Clytia hemisphaerica | exon |
| TCONS_00070663-exon-scaffold_57-1510915933:242944..243852 | TCONS_00070663-exon-scaffold_57-1510915933:242944..243852 | Clytia hemisphaerica | exon |
| TCONS_00070663-exon-scaffold_57-1491911889:245780..245912 | TCONS_00070663-exon-scaffold_57-1491911889:245780..245912 | Clytia hemisphaerica | exon |
| TCONS_00070663-exon-scaffold_57-1491911889:244277..244841 | TCONS_00070663-exon-scaffold_57-1491911889:244277..244841 | Clytia hemisphaerica | exon |
| TCONS_00070663-exon-scaffold_57-1491911889:242944..243852 | TCONS_00070663-exon-scaffold_57-1491911889:242944..243852 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_57 | supercontig | scaffold_57:242944..245912 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | heme binding |
| GO:0004497 | monooxygenase activity |
| GO:0005506 | iron ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0004497 |
monooxygenase activity |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
The following BLAST results are available for this feature:
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