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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071611 ID=TCONS_00071611|Name=TCONS_00071611|organism=Clytia hemisphaerica|type=transcript|length=1105bp
attcacgcgttgaaaaagtccaattcacgtattcacgacagaaaaaaggg
tcattcacgcgtcacgccagcccctgggggagccccgTTAATGTTGGTCG
ATGTTGTGTGTATACTTTGGTCTGgaatattttcagaaaattgtttGCTC
ATCTTCTGCCCAAGCTTTATTCAACTAAGTAGTCaccctttaaaacaaaa
acattgatttcCTAGTTTTCCATATATTATTCTACTTGAGTAGTATTGGC
TTTTGTCAATCTTCTGCCTTGACTCGCCTTCTGTACATTTAAACCAGCCT
cttctgaagaagaaaaatctagTTGATCAACAAATACTCTAGATACACCC
CAATTCACTACTTGTCTGtataaaattttgattactTGTTGTTGACCCTT
TATGTTAACTGCCTCTTCATTCTAGCCTCTAGATAGAAGTTCATGACTAT
GCTCTACTCTCAGTCAATATAGTTAGttataaatataaatcaaaaactAG
CTAATATATAATCAAATAACTATAATAGTATATTATAAGTATAGTTTAAC
CTCTTAATCCAAACCAAAAGGGGGCCTCAGTACAAGATTATATTGTAAAA
TAGATGTAAAGGAGAGTATTTGAGCTCTGCCTAAGCCATGAATTGTTATC
CTCTTGTCGAATCTCATAATAAAATCCACCCAACTAAATTGAAGTTTTAA
CCCTTTTAAACATGTGTTGTTGATTTGAGAATAAGTTAAGTGGTCGGGTA
TGATAAGTTTTAGTTAAACCAAACTAACATGTAGTTCATCAGTTCCGTCT
TCAAGACAGCTATTTCTAAGTATACTCTCTCGAAACACCACCCCAGCGgc
aatcaccttggccaacatTCCAGCATATCCAGCGgcaatcaccttggcca
acATCCCAGCATCTCCAGCGACAATCTCCTAGGCCAACATCCCACCACGC
CCAGCAGCGACAATCTCCCTAGCCATTTCAGCATGTCATTTGGCATCCCA
TTGGTTGGTGTGTCATGTATTTCTAACAAAATTCCTTCTGTAACgctttg
acaaaaaatctgTTACAACAGGACACCACAAAGCTCATACTCAACTCGTT
TCAAA Run BLAST on NCBI transcript from alignment at scaffold_62:283901..285077- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071611 ID=TCONS_00071611|Name=TCONS_00071611|organism=Clytia hemisphaerica|type=transcript|length=1177bp|location=Sequence derived from alignment at scaffold_62:283901..285077- (Clytia hemisphaerica)
ATTCACGCGTTGAAAAAGTCCAATTCACGTATTCACGACAGAAAAAAGGG
TCATTCACGCGTCACGCCAGCCCCTGGGGGAGCCCCGTTAATGTTGGTCG
ATGTTGTGTGTATACTTTGGTCTGGAATATTTTCAGAAAATTGTTTGCTC
ATCTTCTGCCCAAGCTTTATTCAACTAAGTAGTCACCCTTTAAAACAAAA
ACATTGATTTCCTAGTTTTCCATATATTATTCTACTTGAGTAGTATTGGC
TTTTGTCAATCTTCTGCCTTGACTCGCCTTCTGTACATTTAAACCAGCCT
CTTCTGAAGAAGAAAAATCTAGTTGATCAACAAATACTCTAGATACACCC
CAATTCACTACTTGTCTGTATAAAATTTTGATTACTTGTTGTTGACCCTT
TATGTTAACTGCCTCTTCATTCTAGCCTCTAGATAGAAGTTCATGACTAT
GCTCTACTCTCAGTCAATATAGTTAGTTATAAATATAAATCAAAAACTAG
CTAATATATAATCAAATAACTATAATAGTATATTATAAGTATAGTTTAAC
CTCTTAATCCAAACCAAAAGGGGGCCTCAGTACAAGATTATATTGTAAAA
TAGATGTAAAGGAGAGTATTTGAGCTCTGCCTAAGCCATGAATTGTTATC
CTCTTGTCGAATCTCATAATAAAATCCACCCAACTAAATTGAAGTTTTAA
CCCTTTTAAACATGTGTTGTTGATTTGAGAATAAGTTAAGTGGTCGGGTA
TGATAAGTTTTAGTTAAACCAAACTAACATGTAGTTCATCAGTTCCGTCT
TCAAGACAGCTATTTCTAAGTATACTCTCTCGAAACACCACCCCAGCGGC
AATCACCTTGGCCAACATTCCAGCATATCCAGCGGCAATCACCTTGGCCA
ACATCCCAGCATATCCAGCGGCAATCACTTTGGCCAACATCCCAGCATAT
CCAGCGGCAATCACCTTGGCTAACATCCCAGCATCTCCAGCGACAATCTC
CTAGGCCAACATCCCACCACGCCCAGCAGCGACAATCTCCCTAGCCATTT
CAGCATGTCATTTGGCATCCCATTGGTTGGTGTGTCATGTATTTCTAACA
AAATTCCTTCTGTAACGCTTTGACAAAAAATCTGTTACAACAGGACACCA
CAAAGCTCATACTCAACTCGTTTCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071611-exon-scaffold_62-1575043694:284176..285077 | TCONS_00071611-exon-scaffold_62-1575043694:284176..285077 | Clytia hemisphaerica | exon |
| TCONS_00071611-exon-scaffold_62-1575043694:283901..284103 | TCONS_00071611-exon-scaffold_62-1575043694:283901..284103 | Clytia hemisphaerica | exon |
| TCONS_00071611-exon-scaffold_62-1510915933:284176..285077 | TCONS_00071611-exon-scaffold_62-1510915933:284176..285077 | Clytia hemisphaerica | exon |
| TCONS_00071611-exon-scaffold_62-1510915933:283901..284103 | TCONS_00071611-exon-scaffold_62-1510915933:283901..284103 | Clytia hemisphaerica | exon |
| TCONS_00071611-exon-scaffold_62-1491911889:284176..285077 | TCONS_00071611-exon-scaffold_62-1491911889:284176..285077 | Clytia hemisphaerica | exon |
| TCONS_00071611-exon-scaffold_62-1491911889:283901..284103 | TCONS_00071611-exon-scaffold_62-1491911889:283901..284103 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:283901..285077 - |
Blast
The following BLAST results are available for this feature:
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