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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072659 ID=TCONS_00072659|Name=TCONS_00072659|organism=Clytia hemisphaerica|type=transcript|length=1027bp
ATTTCATCAAACGAAATCGAACAATAggtgttcgattatcgaacctgatc
gaacagtaattgaactttaccggaaaatcttcagtttgatgtttgattat
aTCACAGTCCGATTAAGTTCGGCGGGGTTTCCCGATTCGCAGATACGGGA
AACAAAGTTTCTTTTCGGATTCTGGCAGTGCAGGGCGCATGCGCCAAATT
GTATTGACGTGTCTTATACACGCTTCCGAGATGGTAGCTCATCATCGCTG
ATCATCGTCAGCTTAACCTAGTTCATTTCACTAATCATTTATTTATTCTG
TTCCGTTCATGTCACCGTTCCAACGTTCTGATCATTCTACTCTGGAGAAC
AACACAACAAATTCAAACTACTGAAAAAGGTTCAATTTTACGAAGTACAA
GACGTTATCCGGAAAACCACCTTCCATTACTGATTATCGGATGCTTCACT
TCAGTTCACGTCAAGTTCGACCGGAGTgcattattatttttcaacttGTA
AAAGCTTTTACCaattaccgtgagattgggtaacttgcatcagtggaggc
taacatgcatagccctcaaatgaaagacctagctgatcattaaaatacaa
agttaagtcaaaacaaaaatggtagactagagctgcgagaggagctgcgt
agttgtattttaatgaccagccaggtctttcatttgagggctatgcatgt
tagcctccactgatgcaagttaaccaatctcacggtactgaTATATCTTT
ATGataattttgattcattttgtGAATTTCAGTTTTTAGTAGGAGTAGTT
TGTAGCGTTCTGAGTAGTAATCCCAAAGGTTTTACATTTCGAAAGCATCA
TTTGAACCCCTATTTGGCTTTTACAGGGACGAAGTGAGTTTCATCCTGGG
GTAGGTCGTGCCATAACAAAAATGACCACGTACCGTGCGATGATCTTAGA
ACGCTCCTACACTCGTTGTAAATTAATGAAGCCTTACCTCACGCTATCAG
CCGAACAAATACCAATTTACACCAGAA Run BLAST on NCBI transcript from alignment at scaffold_80:344964..345990 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072659 ID=TCONS_00072659|Name=TCONS_00072659|organism=Clytia hemisphaerica|type=transcript|length=1027bp|location=Sequence derived from alignment at scaffold_80:344964..345990 (Clytia hemisphaerica)
TTCTGGTGTAAATTGGTATTTGTTCGGCTGATAGCGTGAGGTAAGGCTTC
ATTAATTTACAACGAGTGTAGGAGCGTTCTAAGATCATCGCACGGTACGT
GGTCATTTTTGTTATGGCACGACCTACCCCAGGATGAAACTCACTTCGTC
CCTGTAAAAGCCAAATAGGGGTTCAAATGATGCTTTCGAAATGTAAAACC
TTTGGGATTACTACTCAGAACGCTACAAACTACTCCTACTAAAAACTGAA
ATTCacaaaatgaatcaaaattatCATAAAGATATAtcagtaccgtgaga
ttggttaacttgcatcagtggaggctaacatgcatagccctcaaatgaaa
gacctggctggtcattaaaatacaactacgcagctcctctcgcagctcta
gtctaccatttttgttttgacttaactttgtattttaatgatcagctagg
tctttcatttgagggctatgcatgttagcctccactgatgcaagttaccc
aatctcacggtaattGGTAAAAGCTTTTACaagttgaaaaataataatgc
ACTCCGGTCGAACTTGACGTGAACTGAAGTGAAGCATCCGATAATCAGTA
ATGGAAGGTGGTTTTCCGGATAACGTCTTGTACTTCGTAAAATTGAACCT
TTTTCAGTAGTTTGAATTTGTTGTGTTGTTCTCCAGAGTAGAATGATCAG
AACGTTGGAACGGTGACATGAACGGAACAGAATAAATAAATGATTAGTGA
AATGAACTAGGTTAAGCTGACGATGATCAGCGATGATGAGCTACCATCTC
GGAAGCGTGTATAAGACACGTCAATACAATTTGGCGCATGCGCCCTGCAC
TGCCAGAATCCGAAAAGAAACTTTGTTTCCCGTATCTGCGAATCGGGAAA
CCCCGCCGAACTTAATCGGACTGTGAtataatcaaacatcaaactgaaga
ttttccggtaaagttcaattactgttcgatcaggttcgataatcgaacac
cTATTGTTCGATTTCGTTTGATGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072659-exon-scaffold_80-1491911889:344964..345990 | TCONS_00072659-exon-scaffold_80-1491911889:344964..345990 | Clytia hemisphaerica | exon |
| TCONS_00072659-exon-scaffold_80-1510915933:344964..345990 | TCONS_00072659-exon-scaffold_80-1510915933:344964..345990 | Clytia hemisphaerica | exon |
| TCONS_00072659-exon-scaffold_80-1575043694:344964..345990 | TCONS_00072659-exon-scaffold_80-1575043694:344964..345990 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_80 | supercontig | scaffold_80:344964..345990 . |
Blast
The following BLAST results are available for this feature:
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