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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073234 ID=TCONS_00073234|Name=TCONS_00073234|organism=Clytia hemisphaerica|type=transcript|length=1206bp
GCTGCATTAACCATTACTTACAGTTTCAACAAGGTAAAAACCATTACCTC
AAATCAATCAATGAAAAACCTTTTACAACATTTAAAATTAGCTTGAGCTT
CTTCAACTCGTGAAAAAGTTAAATACTCgtcaaaattaaatactttAAAT
ATAAAGGATTAAACCGATAACTGACCGAAAACTAAACGGTTAAATACATA
TGGGACTTTACAGTTCAGTTACAGAGGTCTCTCTCTCGGAGTCCGTGCGT
GATACAAGATTTCTTGAACAAAGTTTtgttttataatattttactaTAGC
TTTATAATATTTTACTATAGCTTTATCTCTCCAAATGTAAATTAATGCAT
TGAGACCAGAACATGTAAAAATCGGTATATGTACAATAGGTGATAAATCC
AACAATACGGTTAGATACGGGTCATCAATATCATAAAATATCATCGAAAT
ACCCGAAATGACATAATAAAGACTGAGCGGTAAAATACATACGGAATATA
GCATCGAAAGAGCTTTGAAAATGCCAACGGCTGTCTTTTGAttgatgttt
tgtttatttctttgaCCTCCTAGTATATCCTCCCCACTTTCGTTCTTTCG
TGATTGTGCCGTTAAAATCCTATTGGACCAAATATTCAAAACCGAAGCCG
AAACAACCGAAAAAATTATACCGACGCCTAGTGTCAACCAGTGTGTAAAG
TGAAGAGGTACGGAAGCTAATGTGTATGAAAGGTTAGCGTGTATTGATAA
CAAAAGCACCGATATATTCCAGAATATTATGAATgcgtaaattttctttt
ttgttatgATAGCTTTGTGTTCTAAAGGTTTCCGCGTGACATGATTCCTT
ATGTATGAGATCAATAAAAAGATACCAAGGTCCATTCCAAATGTGTAAAC
TGATATTGCATGGCCGATACCGTAAGCAAGACAACTGGTAGATGATGAAT
AGATGAACCAACCAAAATAAAGAAGGCACAGTAATGTCCCAGCATCCATT
ATTGACAAATATATGAACAATTTCTGAGACATTGTCatttttttgttagt
ttttttcaatCCATTAATTAAAGCAGTGTTTGTGAGAGCAGAGAAAACAA
ACATAAGACCACCTCCAAGGAATTTCACATAAAACGTCGCAGACCTTGAC
GATTCCTCGCTCTGAGTACTGTAGTCGGACATATTGGTCATGTTGTTGGC
CATGTG Run BLAST on NCBI protein sequence of TCONS_00073234-protein >TCONS_00073234-protein ID=TCONS_00073234-protein|Name=TCONS_00073234-protein|organism=Clytia hemisphaerica|type=polypeptide|length=332bp
HMANNMTNMSDYSTQSEESSRSATFYVKFLGGGLMFVFSALTNTALINGL
KKTNKKMTMSQKLFIYLSIMDAGTLLCLLYFGWFIYSSSTSCLAYGIGHA
ISVYTFGMDLGIFLLISYIRNHVTRKPLEHKAIITKKKIYAFIIFWNISV
LLLSIHANLSYTLASVPLHFTHWLTLGVGIIFSVVSASVLNIWSNRILTA
QSRKNESGEDILGGQRNKQNINQKTAVGIFKALSMLYSVCILPLSLYYVI
SGISMIFYDIDDPYLTVLLDLSPIVHIPIFTCSGLNALIYIWRDKAIVKY
YKAIVKYYKTKLCSRNLVSRTDSERETSVTEL Run BLAST on NCBI transcript from alignment at scaffold_88:134538..135743 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073234 ID=TCONS_00073234|Name=TCONS_00073234|organism=Clytia hemisphaerica|type=transcript|length=1206bp|location=Sequence derived from alignment at scaffold_88:134538..135743 (Clytia hemisphaerica)
CACATGGCCAACAACATGACCAATATGTCCGACTACAGTACTCAGAGCGA
GGAATCGTCAAGGTCTGCGACGTTTTATGTGAAATTCCTTGGAGGTGGTC
TTATGTTTGTTTTCTCTGCTCTCACAAACACTGCTTTAATTAATGGattg
aaaaaaactaacaaaaaaatGACAATGTCTCAGAAATTGTTCATATATTT
GTCAATAATGGATGCTGGGACATTACTGTGCCTTCTTTATTTTGGTTGGT
TCATCTATTCATCATCTACCAGTTGTCTTGCTTACGGTATCGGCCATGCA
ATATCAGTTTACACATTTGGAATGGACCTTGGTATCTTTTTATTGATCTC
ATACATAAGGAATCATGTCACGCGGAAACCTTTAGAACACAAAGCTATca
taacaaaaaagaaaatttacgcATTCATAATATTCTGGAATATATCGGTG
CTTTTGTTATCAATACACGCTAACCTTTCATACACATTAGCTTCCGTACC
TCTTCACTTTACACACTGGTTGACACTAGGCGTCGGTATAATTTTTTCGG
TTGTTTCGGCTTCGGTTTTGAATATTTGGTCCAATAGGATTTTAACGGCA
CAATCACGAAAGAACGAAAGTGGGGAGGATATACTAGGAGGtcaaagaaa
taaacaaaacatcaaTCAAAAGACAGCCGTTGGCATTTTCAAAGCTCTTT
CGATGCTATATTCCGTATGTATTTTACCGCTCAGTCTTTATTATGTCATT
TCGGGTATTTCGATGATATTTTATGATATTGATGACCCGTATCTAACCGT
ATTGTTGGATTTATCACCTATTGTACATATACCGATTTTTACATGTTCTG
GTCTCAATGCATTAATTTACATTTGGAGAGATAAAGCTATAGTAAAATAT
TATAAAGCTAtagtaaaatattataaaacaAAACTTTGTTCAAGAAATCT
TGTATCACGCACGGACTCCGAGAGAGAGACCTCTGTAACTGAACTGTAAA
GTCCCATATGTATTTAACCGTTTAGTTTTCGGTCAGTTATCGGTTTAATC
CTTTATATTTaaagtatttaattttgacGAGTATTTAACTTTTTCACGAG
TTGAAGAAGCTCAAGCTAATTTTAAATGTTGTAAAAGGTTTTTCATTGAT
TGATTTGAGGTAATGGTTTTTACCTTGTTGAAACTGTAAGTAATGGTTAA
TGCAGC Coding sequence (CDS) from alignment at scaffold_88:134538..135743 >TCONS_00073234 ID=TCONS_00073234|Name=TCONS_00073234|organism=Clytia hemisphaerica|type=CDS|length=999bp|location=Sequence derived from alignment at scaffold_88:134538..135743 (Clytia hemisphaerica)
CACATGGCCAACAACATGACCAATATGTCCGACTACAGTACTCAGAGCGA
GGAATCGTCAAGGTCTGCGACGTTTTATGTGAAATTCCTTGGAGGTGGTC
TTATGTTTGTTTTCTCTGCTCTCACAAACACTGCTTTAATTAATGGattg
aaaaaaactaacaaaaaaatGACAATGTCTCAGAAATTGTTCATATATTT
GTCAATAATGGATGCTGGGACATTACTGTGCCTTCTTTATTTTGGTTGGT
TCATCTATTCATCATCTACCAGTTGTCTTGCTTACGGTATCGGCCATGCA
ATATCAGTTTACACATTTGGAATGGACCTTGGTATCTTTTTATTGATCTC
ATACATAAGGAATCATGTCACGCGGAAACCTTTAGAACACAAAGCTATca
taacaaaaaagaaaatttacgcATTCATAATATTCTGGAATATATCGGTG
CTTTTGTTATCAATACACGCTAACCTTTCATACACATTAGCTTCCGTACC
TCTTCACTTTACACACTGGTTGACACTAGGCGTCGGTATAATTTTTTCGG
TTGTTTCGGCTTCGGTTTTGAATATTTGGTCCAATAGGATTTTAACGGCA
CAATCACGAAAGAACGAAAGTGGGGAGGATATACTAGGAGGtcaaagaaa
taaacaaaacatcaaTCAAAAGACAGCCGTTGGCATTTTCAAAGCTCTTT
CGATGCTATATTCCGTATGTATTTTACCGCTCAGTCTTTATTATGTCATT
TCGGGTATTTCGATGATATTTTATGATATTGATGACCCGTATCTAACCGT
ATTGTTGGATTTATCACCTATTGTACATATACCGATTTTTACATGTTCTG
GTCTCAATGCATTAATTTACATTTGGAGAGATAAAGCTATAGTAAAATAT
TATAAAGCTAtagtaaaatattataaaacaAAACTTTGTTCAAGAAATCT
TGTATCACGCACGGACTCCGAGAGAGAGACCTCTGTAACTGAACTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073234-exon-scaffold_88-1491911889:134538..135743 | TCONS_00073234-exon-scaffold_88-1491911889:134538..135743 | Clytia hemisphaerica | exon |
| TCONS_00073234-exon-scaffold_88-1510915933:134538..135743 | TCONS_00073234-exon-scaffold_88-1510915933:134538..135743 | Clytia hemisphaerica | exon |
| TCONS_00073234-exon-scaffold_88-1575043694:134538..135743 | TCONS_00073234-exon-scaffold_88-1575043694:134538..135743 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_88 | supercontig | scaffold_88:134538..135743 . |
Blast
The following BLAST results are available for this feature:
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